ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbasdi01 | 654 | AV928451 | not_full | gb|AF435815.1| Hordeum vulgare thioredoxin h-like protein mRNA, complete cds Length = 396 | 146 | not_full | TRXH_PICMA (O65049) Thioredoxin H-type (TRX-H) Length = 125 | 273 | -- | --- | - | -- | --- | - |
| rbasdh24 | 660 | AV928450 | not_full | dbj|AK099501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028I07, full insert sequence Length = 1837 | 135 | not_full | CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1) (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 | 262 | -- | --- | - | -- | --- | - |
| rbasdh23 | 608 | AV836862 | not_full | ref|XM_479721.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1217 | 37 | not_full | KADC_MAIZE (P43188) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) Length = 222 | 259 | -- | --- | - | -- | --- | - |
| rbasdh22 | 668 | AV928449 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 460 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 160 | -- | --- | - | -- | --- | - |
| rbasdh21 | 323 | AV928448 | not_full | emb|AM039895.1| Hordeum vulgare mRNA for putative AdoMet synthase 3 (sam3 gene) Length = 1447 | 101 | not_full | HYPD1_BRAJA (Q9ANP1) Hydrogenase expression/formation protein hypD1 Length = 380 | 1 | -- | --- | - | -- | --- | - |
| rbasdh20 | 636 | AV928447 | not_full | ref|NM_191653.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 438 | 102 | not_full | RL28_DROME (Q9VZS5) 60S ribosomal protein L28 Length = 144 | 17 | -- | --- | - | -- | --- | - |
| rbasdh18 | 753 | AV928446 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdh17 | 658 | AV928445 | not_full | gb|AY377991.1| Triticum aestivum chloroplast-localized Ptr ToxA-binding protein1 (TaThf1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1130 | 79 | not_full | THF1_ORYSA (Q84PB7) Protein THYLAKOID FORMATION1, chloroplast precursor Length = 287 | 29 | -- | --- | - | -- | --- | - |
| rbasdh15 | 687 | AV928444 | not_full | dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047H21, full insert sequence Length = 1245 | 51 | not_full | ECR1_PYRAE (Q8ZVM8) Probable exosome complex RNA-binding protein 1 Length = 235 | 43 | -- | --- | - | -- | --- | - |
| rbasdh11 | 679 | AV928443 | not_full | gb|AY736124.1| Triticum aestivum ADP-ribosylation factor mRNA, complete cds Length = 583 | 500 | not_full | ARF_MAIZE (P49076) ADP-ribosylation factor Length = 180 | 500 | -- | --- | - | -- | --- | - |
| rbasdh10 | 277 | AV928442 | not_full | emb|AM039893.1| Hordeum vulgare sam1 gene for putative AdoMet synthase 1 Length = 1515 | 133 | not_full | CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 (EC 3.6.1.-) (ATP-dependent helicase CHD4) (CHD-4) (Mi-2 autoantigen 218 kDa protein) (Mi2-beta) Length = 1912 | 2 | -- | --- | - | -- | --- | - |
| rbasdh09 | 625 | AV928441 | not_full | gb|AY108616.1| Zea mays PCO131694 mRNA sequence Length = 1958 | 500 | not_full | ACT1_PEA (P30164) Actin-1 Length = 376 | 394 | -- | --- | - | -- | --- | - |
| rbasdh07 | 497 | AV928440 | not_full | gb|AY247791.1| Hordeum vulgare vacuolar Na+/H+ antiporter (NHX2) mRNA, complete cds Length = 1932 | 44 | not_full | NHX2_ARATH (Q56XP4) Sodium/hydrogen exchanger 2 (Na(+)/H(+) exchanger 2) (NHE-2) Length = 546 | 16 | -- | --- | - | -- | --- | - |
| rbasdh06 | 607 | AV928439 | not_full | ref|XM_550617.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 | 38 | not_full | NUD19_ARATH (Q94A82) Probable NADH pyrophosphatase NUDT19, chloroplast precursor (EC 3.6.1.22) (Nudix hydrolase 19) (AtNUDT19) Length = 438 | 81 | -- | --- | - | -- | --- | - |
| rbasdh05 | 605 | AV928438 | not_full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 378 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 22 | -- | --- | - | -- | --- | - |
| rbasdh04 | 678 | AV928437 | not_full | dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047H21, full insert sequence Length = 1245 | 54 | not_full | ECR1_PYRAE (Q8ZVM8) Probable exosome complex RNA-binding protein 1 Length = 235 | 43 | -- | --- | - | -- | --- | - |
| rbasdh03 | 632 | AV928436 | not_full | gb|AY049041.1| Triticum aestivum 28S ribosomal RNA gene, partial sequence Length = 3341 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbasdh02 | 671 | AV928435 | not_full | ref|XM_479581.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1803 | 50 | not_full | DOF33_ARATH (Q8LFV3) Dof zinc finger protein DOF3.3 (AtDOF3.3) (H-protein promoter-binding factor 2a) Length = 448 | 22 | -- | --- | - | -- | --- | - |
| rbasdh01 | 651 | AV928434 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 452 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 156 | -- | --- | - | -- | --- | - |
| rbasdg24 | 675 | AV928433 | not_full | gb|AY736124.1| Triticum aestivum ADP-ribosylation factor mRNA, complete cds Length = 583 | 500 | not_full | ARF_MAIZE (P49076) ADP-ribosylation factor Length = 180 | 500 | -- | --- | - | -- | --- | - |
| rbasdg23 | 581 | AV928432 | not_full | gb|AY290723.1| Triticum aestivum acidic ribosomal protein P1a-like mRNA, partial sequence Length = 597 | 122 | not_full | RLA1_MAIZE (P52855) 60S acidic ribosomal protein P1 (L12) Length = 109 | 40 | -- | --- | - | -- | --- | - |
| rbasdg21 | 200 | AV928431 | not_full | dbj|AK070082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E02, full insert sequence Length = 960 | 18 | not_full | OPA3_SCHPO (Q9P7W0) Putative OPA3-like protein C1703.11 Length = 218 | 3 | -- | --- | - | -- | --- | - |
| rbasdg18 | 704 | AV928430 | not_full | gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds Length = 1013 | 500 | not_full | EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea m I) Length = 269 | 58 | -- | --- | - | -- | --- | - |
| rbasdg17 | 673 | AV928429 | not_full | ref|XM_468449.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1545 | 32 | not_full | ZNF45_HUMAN (Q02386) Zinc finger protein 45 (BRC1744) Length = 682 | 5 | -- | --- | - | -- | --- | - |
| rbasdg16 | 516 | AV928428 | not_full | gb|BC085132.1| Mus musculus solute carrier family 5 (sodium-dependent vitamin transporter), member 6, mRNA (cDNA clone MGC:109689 IMAGE:6416422), complete cds Length = 3051 | 24 | not_full | RAF1_XENLA (P09560) RAF proto-oncogene serine/threonine-protein kinase (EC 2.7.11.1) (C-RAF) Length = 638 | 3 | -- | --- | - | -- | --- | - |
| rbasdg15 | 340 | AV928427 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_AEGCR (P25413) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| rbasdg14 | 217 | AV928426 | not_full | gb|BT009431.1| Triticum aestivum clone wlmk1.pk0035.e4:fis, full insert mRNA sequence Length = 1652 | 6 | not_full | MOES_RAT (O35763) Moesin (Membrane-organizing extension spike protein) Length = 576 | 17 | -- | --- | - | -- | --- | - |
| rbasdg07 | 720 | AV928425 | not_full | gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 | 500 | not_full | HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1) Length = 651 | 500 | -- | --- | - | -- | --- | - |
| rbasdg06 | 685 | AV928424 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdg05 | 681 | AV928423 | not_full | gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 | 500 | not_full | HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1) Length = 651 | 500 | -- | --- | - | -- | --- | - |
| rbasdg04 | 402 | AV928422 | not_full | gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2553 | 130 | not_full | HSP83_ORYSA (Q07078) Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) Length = 699 | 110 | -- | --- | - | -- | --- | - |
| rbasdg03 | 702 | AV928421 | not_full | ref|XM_466018.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3627 | 28 | not_full | GCP5_MACFA (Q95K09) Gamma-tubulin complex component 5 (GCP-5) (Fragment) Length = 725 | 31 | -- | --- | - | -- | --- | - |
| rbasdg02 | 752 | AV928420 | not_full | gb|BT017807.1| Zea mays clone EL01N0506H05.c mRNA sequence Length = 1297 | 500 | not_full | ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-containing protein 1 (Zinc finger protein 363) (CH-rich-interacting match with PLAG1) (Androgen receptor N-terminal-interacting protein) Length = 261 | 8 | -- | --- | - | -- | --- | - |
| rbasdg01 | 719 | AV928419 | not_full | dbj|AK065176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D10, full insert sequence Length = 2389 | 72 | not_full | YCF2_SILLA (Q589A6) Protein ycf2 Length = 2223 | 17 | -- | --- | - | -- | --- | - |
| rbasdf24 | 155 | AV928418 | not_full | gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 | 11 | not_full | VHS_HHV2H (P68340) Virion host shutoff protein Length = 492 | 6 | -- | --- | - | -- | --- | - |
| rbasdf23 | 646 | AV928417 | not_full | dbj|AK061949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E08, full insert sequence Length = 1158 | 102 | not_full | YL067_MIMIV (Q5UPD8) Putative BTB/POZ domain-containing protein L67 Length = 498 | 6 | -- | --- | - | -- | --- | - |
| rbasdf22 | 626 | AV928416 | not_full | dbj|AK104570.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G06, full insert sequence Length = 1096 | 48 | not_full | MYSC_ACACA (P10569) Myosin IC heavy chain Length = 1168 | 9 | -- | --- | - | -- | --- | - |
| rbasdf20 | 636 | AV928415 | not_full | gb|AY167561.1| Hordeum vulgare subsp. vulgare GAMYB-binding protein (kgm) mRNA, complete cds Length = 2320 | 310 | not_full | NCOA2_MOUSE (Q61026) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional intermediary factor 2) (Glucocorticoid receptor-interacting protein 1) (GRIP-1) Length = 1462 | 24 | -- | --- | - | -- | --- | - |
| rbasdf19 | 713 | AV928414 | not_full | ref|NM_197846.1| Oryza sativa (japonica cultivar-group) putative enoyl-CoA-hydratase (OSJNBa0003O19.9), mRNA Length = 1601 | 34 | not_full | MATMC_SCHKA (Q6WRX6) Mating-type M-specific polypeptide Mc (mat-Mc) Length = 181 | 13 | -- | --- | - | -- | --- | - |
| rbasdf16 | 617 | AV928413 | not_full | emb|Y09741.1|HVBTUBI Hordeum vulgare mRNA for beta-tubulin 1 Length = 1646 | 500 | not_full | TBB_HORVU (P93176) Tubulin beta chain (Beta tubulin) Length = 447 | 379 | -- | --- | - | -- | --- | - |
| rbasdf14 | 562 | AV836861 | not_full | ref|NM_185816.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2844 | 18 | not_full | SGS1_YEAST (P35187) ATP-dependent helicase SGS1 (EC 3.6.1.-) (Helicase TPS1) Length = 1447 | 3 | -- | --- | - | -- | --- | - |
| rbasdf12 | 596 | AV928412 | not_full | gb|DQ083192.1| Oryza sativa (indica cultivar-group) clone 5S5H65 mRNA sequence Length = 741 | 67 | not_full | OGG1_RAT (O70249) N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (AP lyase)] Length = 345 | 2 | -- | --- | - | -- | --- | - |
| rbasdf11 | 698 | AV928411 | not_full | gb|DQ083192.1| Oryza sativa (indica cultivar-group) clone 5S5H65 mRNA sequence Length = 741 | 79 | not_full | UBP7_HUMAN (Q93009) Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.1.2.15) (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7) (Deubiquitinating enzyme 7) (Herpesvirus-associated ubiquitin-specific protease) Length = 1102 | 4 | -- | --- | - | -- | --- | - |
| rbasdf09 | 166 | AV928410 | not_full | gb|AC007922.13| Homo sapiens chromosome 18, clone RP11-178F10, complete sequence Length = 140555 | 23 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbasdf07 | 638 | AV928409 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 36 | not_full | CUCM1_CUCME (Q39547) Cucumisin precursor (EC 3.4.21.25) (Allergen Cuc m 1) Length = 731 | 9 | -- | --- | - | -- | --- | - |
| rbasdf06 | 721 | AV928408 | not_full | emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA Length = 705 | 500 | not_full | NLT41_HORVU (Q43767) Nonspecific lipid-transfer protein 4.1 precursor (LTP 4.1) (CW21) (CW-21) Length = 115 | 78 | -- | --- | - | -- | --- | - |
| rbasdf05 | 654 | AV836860 | not_full | dbj|AK099499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028A12, full insert sequence Length = 1070 | 30 | not_full | FER1_DESAF (P00210) Ferredoxin-1 (Ferredoxin I) (FdI) Length = 64 | 177 | -- | --- | - | -- | --- | - |
| rbasdf02 | 760 | AV928407 | not_full | dbj|AK073065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F05, full insert sequence Length = 1734 | 500 | not_full | ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1) Length = 3726 | 3 | -- | --- | - | -- | --- | - |
| rbasdf01 | 720 | AV928406 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasde24 | 751 | AV928405 | not_full | gb|AY109843.1| Zea mays CL6204_1 mRNA sequence Length = 760 | 43 | not_full | HERC2_DROME (Q9VR91) HECT domain and RCC1-like domain-containing protein 2 Length = 4912 | 4 | -- | --- | - | -- | --- | - |
