>ref|XM_468449.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1545

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 135/168 (80%), Gaps = 3/168 (1%)
 Strand = Plus / Minus

                                                                       
Query: 204 atcagcccaatcgagcatttccatgggcagccggactcgggtggttgccggcgacaagga 263
           |||||| ||||||||||| |||||||  ||| |||   ||||| |||  ||| |||||||
Sbjct: 989 atcagctcaatcgagcatgtccatggatagctggagctgggtgattgttggcaacaagga 930

                                                                       
Query: 264 tgtctttgatccggtttagcggtacggcagcctggttgattctctccttgctgctggcag 323
           |||| ||||| || || | |||| |  |||| ||||| ||| |||| |||||||||| | 
Sbjct: 929 tgtccttgatgcgattcaacggtcctacagcttggttaattttctcattgctgctggga- 871

                                                           
Query: 324 gttgcactttgacctgctgaagctgcagcttgcccttctgccagcgcc 371
             | || ||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 870 --tacaatttgaccggctgatgctgcaacttgcccttctgccagcgcc 825

>dbj|AK071088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080K14, full
           insert sequence
          Length = 1542

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 135/168 (80%), Gaps = 3/168 (1%)
 Strand = Plus / Minus

                                                                       
Query: 204 atcagcccaatcgagcatttccatgggcagccggactcgggtggttgccggcgacaagga 263
           |||||| ||||||||||| |||||||  ||| |||   ||||| |||  ||| |||||||
Sbjct: 988 atcagctcaatcgagcatgtccatggatagctggagctgggtgattgttggcaacaagga 929

                                                                       
Query: 264 tgtctttgatccggtttagcggtacggcagcctggttgattctctccttgctgctggcag 323
           |||| ||||| || || | |||| |  |||| ||||| ||| |||| |||||||||| | 
Sbjct: 928 tgtccttgatgcgattcaacggtcctacagcttggttaattttctcattgctgctggga- 870

                                                           
Query: 324 gttgcactttgacctgctgaagctgcagcttgcccttctgccagcgcc 371
             | || ||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 869 --tacaatttgaccggctgatgctgcaacttgcccttctgccagcgcc 824

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 331      tttgacctgctgaagctgcagcttgcccttctgccagcgcc 371
                ||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 35295579 tttgaccggctgatgctgcaacttgcccttctgccagcgcc 35295539

>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 331   tttgacctgctgaagctgcagcttgcccttctgccagcgcc 371
             ||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 45913 tttgaccggctgatgctgcaacttgcccttctgccagcgcc 45873

>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0474F11
          Length = 139544

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                       
Query: 331    tttgacctgctgaagctgcagcttgcccttctgccagcgcc 371
              ||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 107629 tttgaccggctgatgctgcaacttgcccttctgccagcgcc 107589

>dbj|AB084348.1| Chloromonas insignis chloroplast psaB gene for P700 chlorophyll
            a-apoprotein A2, partial cds, strain:NIES-447
          Length = 1392

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 329  actttgacctgctgaagctgcagc 352
            ||||||||||||||||||||||||
Sbjct: 1203 actttgacctgctgaagctgcagc 1180

>gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, complete sequence
          Length = 220629

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 117    atcgcctcaatttacagttctgccg 141
              ||||||||||||| |||||||||||
Sbjct: 176501 atcgcctcaatttccagttctgccg 176477

>ref|XM_848643.1| PREDICTED: Canis familiaris hypothetical protein LOC611028
           (LOC611028), mRNA
          Length = 1211

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 339 gctgaagctgcagcttgcccttctg 363
           ||||||||| |||||||||||||||
Sbjct: 254 gctgaagctccagcttgcccttctg 278

>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete
              sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 117    atcgcctcaatttacagttctgccg 141
              ||||||||||||| |||||||||||
Sbjct: 164605 atcgcctcaatttccagttctgccg 164581

>emb|AL358335.4|CNS05TE6 Human chromosome 14 DNA sequence BAC R-2G1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171072

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 32     agaagttttggggtttaattacaca 56
              |||| ||||||||||||||||||||
Sbjct: 135619 agaacttttggggtttaattacaca 135643

>dbj|AP003050.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-410I24, complete
             sequence
          Length = 152715

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 321   caggttgcactttgacctgct 341
             |||||||||||||||||||||
Sbjct: 15498 caggttgcactttgacctgct 15478

>emb|AL645797.11| Mouse DNA sequence from clone RP23-153J5 on chromosome 11 Contains a
              novel gene and a CpG island, complete sequence
          Length = 190784

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 339    gctgaagctgcagcttgccct 359
              |||||||||||||||||||||
Sbjct: 181118 gctgaagctgcagcttgccct 181098

>gb|AC141878.4| Mus musculus BAC clone RP24-257N14 from 14, complete sequence
          Length = 192097

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 117   atcgcctcaatttacagttctgccg 141
             ||||||||||||| |||||||||||
Sbjct: 11056 atcgcctcaatttccagttctgccg 11032

>emb|AL713880.1|CNS07YOW Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
             clone 366M1 of library Caltech CITB-BAC from chromosome 11
             of Mus musculus (mouse)
          Length = 111702

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 339   gctgaagctgcagcttgccct 359
             |||||||||||||||||||||
Sbjct: 28856 gctgaagctgcagcttgccct 28836

>ref|XM_591253.2| PREDICTED: Bos taurus similar to CG12093-PA (LOC513556), mRNA
          Length = 1586

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 gctgaagctgcagcttgcccttct 362
           ||||||||| ||||||||||||||
Sbjct: 379 gctgaagctccagcttgcccttct 402

>gb|AE009172.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 198
            of 256 of the complete sequence
          Length = 11789

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 585  cttcggccttctcattggca 604
            ||||||||||||||||||||
Sbjct: 2291 cttcggccttctcattggca 2310

>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   gagacgacgacgctcatcgc 121
             ||||||||||||||||||||
Sbjct: 98112 gagacgacgacgctcatcgc 98131

>ref|XM_812895.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506625.240) partial mRNA
          Length = 906

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 531 caacaacattggacgagtca 550
           ||||||||||||||||||||
Sbjct: 235 caacaacattggacgagtca 216

>emb|AL596254.2| Human DNA sequence from clone RP11-252L24 on chromosome 1 Contains part
             of the PLAC3 gene for placenta-specific 3 (PLAC3),
             complete sequence
          Length = 72207

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   gtgacaggatcaacattttg 570
             ||||||||||||||||||||
Sbjct: 10010 gtgacaggatcaacattttg 10029

>ref|XM_504639.1| Yarrowia lipolytica CLIB122, YALI0E31515g predicted mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 564 cattttggagcattgtattt 583
           ||||||||||||||||||||
Sbjct: 143 cattttggagcattgtattt 124

>emb|AL365274.17| Human DNA sequence from clone RP11-298A17 on chromosome 9 Contains the
             DAB2IP gene for DAB2 interacting protein (AF9Q34, DIP1/2,
             KIAA1743) and four CpG islands, complete sequence
          Length = 171941

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cacagcttgttgctctcctt 441
             ||||||||||||||||||||
Sbjct: 68729 cacagcttgttgctctcctt 68710

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 234    ccggactcgggtggttgccggcga 257
              ||||| ||||||||||||||||||
Sbjct: 547439 ccggaatcgggtggttgccggcga 547416

>emb|CR352245.9| Zebrafish DNA sequence from clone DKEY-153L11 in linkage group 16,
              complete sequence
          Length = 136903

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    ttgcactttgacctgctgaa 344
              ||||||||||||||||||||
Sbjct: 129449 ttgcactttgacctgctgaa 129430

>emb|BX511161.6| Zebrafish DNA sequence from clone DKEY-248G17 in linkage group 16,
            complete sequence
          Length = 101801

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  ttgcactttgacctgctgaa 344
            ||||||||||||||||||||
Sbjct: 8229 ttgcactttgacctgctgaa 8248

>gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 176521

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   tccatgggcagccggactcgggtg 246
             ||||||| ||||||||||||||||
Sbjct: 74526 tccatggccagccggactcgggtg 74503

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 585     cttcggccttctcattggca 604
               ||||||||||||||||||||
Sbjct: 2193140 cttcggccttctcattggca 2193159

>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence
          Length = 203200

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   tgattctctccttgctgctg 319
             ||||||||||||||||||||
Sbjct: 41010 tgattctctccttgctgctg 41029

>gb|AC008738.7| Homo sapiens chromosome 19 clone CTD-2540B15, complete sequence
          Length = 219821

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    tgattctctccttgctgctg 319
              ||||||||||||||||||||
Sbjct: 213122 tgattctctccttgctgctg 213141

>emb|CR854984.10| Zebrafish DNA sequence from clone DKEY-62B6 in linkage group 16, complete
              sequence
          Length = 223943

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    ttgcactttgacctgctgaa 344
              ||||||||||||||||||||
Sbjct: 151131 ttgcactttgacctgctgaa 151150

>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete
             sequence
          Length = 297894

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   tccatgggcagccggactcgggtg 246
             ||||||| ||||||||||||||||
Sbjct: 60648 tccatggccagccggactcgggtg 60625

>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     cgttatcatcagcccaatcg 216
               ||||||||||||||||||||
Sbjct: 1814499 cgttatcatcagcccaatcg 1814480

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 564     cattttggagcattgtattt 583
               ||||||||||||||||||||
Sbjct: 3717509 cattttggagcattgtattt 3717528


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,205,107
Number of Sequences: 3902068
Number of extensions: 5205107
Number of successful extensions: 113746
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113561
Number of HSP's gapped (non-prelim): 182
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)