Clone Name | rbasdg16 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RAF1_XENLA (P09560) RAF proto-oncogene serine/threonine-protein ... | 32 | 1.0 | 2 | PUPA_PSEPU (P25184) Ferric-pseudobactin 358 receptor precursor | 30 | 3.9 | 3 | JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone dem... | 29 | 6.7 |
---|
>RAF1_XENLA (P09560) RAF proto-oncogene serine/threonine-protein kinase (EC| 2.7.11.1) (C-RAF) Length = 638 Score = 32.0 bits (71), Expect = 1.0 Identities = 31/101 (30%), Positives = 40/101 (39%) Frame = +1 Query: 169 FACYRSGFKMKMPASVQYPNL*KVD*SNARQHLSR*QPCSNNLVLHGSTTPRA*GSHLFS 348 F C G+K S + P + VD SN RQ L P NN+ GSH Sbjct: 162 FRCQTCGYKFHEHCSTKVPTM-CVDWSNIRQLLLFPNP--NNI---------EGGSHTLP 209 Query: 349 SQTKSRAIAHVPIRQHPISSNRQHPASSPFFHAAPLQAKTC 471 S T R V I P+SS +++ PF + P C Sbjct: 210 SLTMRRIGESVRI---PVSSQQRYSTPHPFSFSTPSPVSEC 247
>PUPA_PSEPU (P25184) Ferric-pseudobactin 358 receptor precursor| Length = 819 Score = 30.0 bits (66), Expect = 3.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +2 Query: 41 HTXRNYAGGLQQQTSHTWQYGISS 112 +T NY GL+QQ +H WQ+ +++ Sbjct: 395 YTTTNYTFGLEQQLAHDWQFKLAA 418
>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation| protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) Length = 2350 Score = 29.3 bits (64), Expect = 6.7 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +1 Query: 262 HLSR*QPCSNNLVLHGSTTPRA*GSHLFSSQTKSRAIAHVPIRQHPISSNRQHPASSP 435 H S + C N H + TP G HL + T + I HP++S HP P Sbjct: 560 HSSSHRTCLNPGTHHPALTP---GPHLLAGSTSQTPLP--TINTHPLTSGPHHPVHHP 612 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,902,220 Number of Sequences: 219361 Number of extensions: 1478052 Number of successful extensions: 2872 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2813 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2865 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)