ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdh06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550617.1| Oryza sativa (japonica cultivar-group), mRNA 345 1e-91
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
3dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
4ref|NM_122014.2| Arabidopsis thaliana hydrolase AT5G20070 mRNA, ... 82 2e-12
5gb|AY090287.1| Arabidopsis thaliana AT5g20070/F28I16_220 mRNA, c... 82 2e-12
6gb|AY049280.1| Arabidopsis thaliana AT5g20070/F28I16_220 mRNA, c... 82 2e-12
7emb|BX832211.1|CNS09ZQ1 Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
8emb|BX833644.1|CNS09Z9Y Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
9gb|AC008074.3| Homo sapiens BAC clone RP11-568N6 from 2, complet... 50 0.009
10gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete s... 50 0.009
11gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16 46 0.13
12ref|XM_676883.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.53
13gb|AC120181.10| Mus musculus chromosome 12, clone RP24-500I11, c... 42 2.1
14gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, comp... 42 2.1
15emb|AL445564.1|MPULM02 Mycoplasma pulmonis (strain UAB CTIP) com... 42 2.1
16emb|BX324131.6| Zebrafish DNA sequence from clone CH211-119E14 i... 42 2.1
17dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.1
18gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 42 2.1
19dbj|AP000885.1| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 42 2.1
20ref|NM_180794.1| Arabidopsis thaliana unknown protein AT5G43560 ... 40 8.3
21ref|NM_123722.3| Arabidopsis thaliana unknown protein AT5G43560 ... 40 8.3
22gb|BC078158.1| Homo sapiens cDNA clone IMAGE:6160021, partial cds 40 8.3
23ref|NM_138473.2| Homo sapiens Sp1 transcription factor (SP1), mRNA 40 8.3
24gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome 40 8.3
25emb|CR626884.13| Zebrafish DNA sequence from clone DKEY-83H2 in ... 40 8.3
26gb|BC012008.1| Homo sapiens Sp1 transcription factor, mRNA (cDNA... 40 8.3
27gb|AC124724.4| Mus musculus BAC clone RP23-446L16 from chromosom... 40 8.3
28gb|AC095025.2| Sus scrofa clone RP44-93L12, complete sequence 40 8.3
29gb|AY050808.2| Arabidopsis thaliana At5g43560 mRNA sequence 40 8.3
30emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC... 40 8.3
31gb|AY078956.1| Arabidopsis thaliana AT5g43560/K9D7_6 mRNA, compl... 40 8.3
32dbj|AB169821.1| Macaca fascicularis brain cDNA, clone: QflA-1070... 40 8.3
33gb|AC068889.35| Homo sapiens 12 BAC RP11-774I22 (Roswell Park Ca... 40 8.3
34gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome 40 8.3
35dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.3
36emb|AL672233.18| Mouse DNA sequence from clone RP23-54I20 on chr... 40 8.3
37emb|AL772149.4| Mouse DNA sequence from clone RP23-108H7 on chro... 40 8.3
38gb|AC095023.2| Sus scrofa clone RP44-405I2, complete sequence 40 8.3 
>ref|XM_550617.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1218

 Score =  345 bits (174), Expect = 1e-91
 Identities = 369/434 (85%)
 Strand = Plus / Minus

                                                                        
Query: 174  tcataggttggagaaggagctgggcaactttggcgccccttctaaggcccacgacgatat 233
            ||||||||||||||||||||| ||   |||||| || ||||| || ||||| || |||||
Sbjct: 1218 tcataggttggagaaggagctaggtgcctttggtgctccttcaaaagcccatgatgatat 1159

                                                                        
Query: 234  gaggtgatgagcgatggcgtagggcccggggacaaacatcggagcgggttcctcgctctc 293
            |||||| ||||| || || |||||||| || || ||||| ||||| || ||||| || ||
Sbjct: 1158 gaggtggtgagcaatcgcatagggcccaggaacgaacattggagcaggctcctcactttc 1099

                                                                        
Query: 294  gacgctgaggtcggaggaggtgctcggccctctctcagcgcccttgcatatttggttgac 353
            ||   ||||||| |  ||| ||||| ||| | ||||| | |||||||||||||| |||||
Sbjct: 1098 gattttgaggtcagcagagatgctctgccttttctcaacacccttgcatatttgattgac 1039

                                                                        
Query: 354  cttgagcgcacttgatctctgggctttctcatactcagcgaatgttagcgctttcttaac 413
            |||||||||| ||| |||||| |||||||| || || || |||||||| |||||||| ||
Sbjct: 1038 cttgagcgcatttgttctctgagctttctcgtattctgcaaatgttagtgctttcttgac 979

                                                                        
Query: 414  gtcttcacggctgtgccactgggcatcttcaagctcttttttatcaacatgtatgtccaa 473
             || |||||||||||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 978  atcctcacggctgtgccattgggcatcttcaagctctttcttgtcaacatgtatctccaa 919

                                                                        
Query: 474  tgatttagcataagcaaagaaacccaccatcaactggcatggcatggtatttggcccaac 533
            ||||||||| ||||||||||| ||||||||||  ||||||||||| ||| | ||||||||
Sbjct: 918  tgatttagcgtaagcaaagaatcccaccatcagttggcatggcatagtactcggcccaac 859

                                                                        
Query: 534  aggccatggttgagaactgtggtaaacgacttgcccaacttcaatcccagtttcttccca 593
            |||||| |||||||||||||| |||| ||||| |||||||| ||| ||||| ||||||||
Sbjct: 858  aggccacggttgagaactgtgataaatgacttccccaacttgaataccagtctcttccca 799

                          
Query: 594  tgtttcccttctca 607
             |||||||||||||
Sbjct: 798  cgtttcccttctca 785
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  159 bits (80), Expect = 1e-35
 Identities = 221/268 (82%)
 Strand = Plus / Plus

                                                                           
Query: 174     tcataggttggagaaggagctgggcaactttggcgccccttctaaggcccacgacgatat 233
               ||||||||||||||||||||| ||   |||||| || ||||| || ||||| || |||||
Sbjct: 2156895 tcataggttggagaaggagctaggtgcctttggtgctccttcaaaagcccatgatgatat 2156954

                                                                           
Query: 234     gaggtgatgagcgatggcgtagggcccggggacaaacatcggagcgggttcctcgctctc 293
               |||||| ||||| || || |||||||| || || ||||| ||||| || ||||| || ||
Sbjct: 2156955 gaggtggtgagcaatcgcatagggcccaggaacgaacattggagcaggctcctcactttc 2157014

                                                                           
Query: 294     gacgctgaggtcggaggaggtgctcggccctctctcagcgcccttgcatatttggttgac 353
               ||   ||||||| |  ||| ||||| ||| | ||||| | |||||||||||||| |||||
Sbjct: 2157015 gattttgaggtcagcagagatgctctgccttttctcaacacccttgcatatttgattgac 2157074

                                                                           
Query: 354     cttgagcgcacttgatctctgggctttctcatactcagcgaatgttagcgctttcttaac 413
               |||||||||| ||| |||||| |||||||| || || || |||||||| |||||||| ||
Sbjct: 2157075 cttgagcgcatttgttctctgagctttctcgtattctgcaaatgttagtgctttcttgac 2157134

                                           
Query: 414     gtcttcacggctgtgccactgggcatct 441
                || |||||||||||||| |||||||||
Sbjct: 2157135 atcctcacggctgtgccattgggcatct 2157162



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                           
Query: 440     cttcaagctcttttttatcaacatgtatgtccaatgatttagcataagcaaagaaaccca 499
               ||||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 2157435 cttcaagctctttcttgtcaacatgtatctccaatgatttagcgtaagcaaagaatccca 2157494

                                                 
Query: 500     ccatcaactggcatggcatggtatttggcccaac 533
               ||||||  ||||||||||| ||| | ||||||||
Sbjct: 2157495 ccatcagttggcatggcatagtactcggcccaac 2157528



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                           
Query: 533     caggccatggttgagaactgtggtaaacgacttgcccaacttcaatcccagtttcttccc 592
               ||||||| |||||||||||||| |||| ||||| |||||||| ||| ||||| |||||||
Sbjct: 2157932 caggccacggttgagaactgtgataaatgacttccccaacttgaataccagtctcttccc 2157991

                              
Query: 593     atgtttcccttctca 607
               | |||||||||||||
Sbjct: 2157992 acgtttcccttctca 2158006
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>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0535G04
          Length = 154180

 Score =  159 bits (80), Expect = 1e-35
 Identities = 221/268 (82%)
 Strand = Plus / Plus

                                                                         
Query: 174   tcataggttggagaaggagctgggcaactttggcgccccttctaaggcccacgacgatat 233
             ||||||||||||||||||||| ||   |||||| || ||||| || ||||| || |||||
Sbjct: 16352 tcataggttggagaaggagctaggtgcctttggtgctccttcaaaagcccatgatgatat 16411

                                                                         
Query: 234   gaggtgatgagcgatggcgtagggcccggggacaaacatcggagcgggttcctcgctctc 293
             |||||| ||||| || || |||||||| || || ||||| ||||| || ||||| || ||
Sbjct: 16412 gaggtggtgagcaatcgcatagggcccaggaacgaacattggagcaggctcctcactttc 16471

                                                                         
Query: 294   gacgctgaggtcggaggaggtgctcggccctctctcagcgcccttgcatatttggttgac 353
             ||   ||||||| |  ||| ||||| ||| | ||||| | |||||||||||||| |||||
Sbjct: 16472 gattttgaggtcagcagagatgctctgccttttctcaacacccttgcatatttgattgac 16531

                                                                         
Query: 354   cttgagcgcacttgatctctgggctttctcatactcagcgaatgttagcgctttcttaac 413
             |||||||||| ||| |||||| |||||||| || || || |||||||| |||||||| ||
Sbjct: 16532 cttgagcgcatttgttctctgagctttctcgtattctgcaaatgttagtgctttcttgac 16591

                                         
Query: 414   gtcttcacggctgtgccactgggcatct 441
              || |||||||||||||| |||||||||
Sbjct: 16592 atcctcacggctgtgccattgggcatct 16619



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                         
Query: 440   cttcaagctcttttttatcaacatgtatgtccaatgatttagcataagcaaagaaaccca 499
             ||||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 16892 cttcaagctctttcttgtcaacatgtatctccaatgatttagcgtaagcaaagaatccca 16951

                                               
Query: 500   ccatcaactggcatggcatggtatttggcccaac 533
             ||||||  ||||||||||| ||| | ||||||||
Sbjct: 16952 ccatcagttggcatggcatagtactcggcccaac 16985



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                         
Query: 533   caggccatggttgagaactgtggtaaacgacttgcccaacttcaatcccagtttcttccc 592
             ||||||| |||||||||||||| |||| ||||| |||||||| ||| ||||| |||||||
Sbjct: 17389 caggccacggttgagaactgtgataaatgacttccccaacttgaataccagtctcttccc 17448

                            
Query: 593   atgtttcccttctca 607
             | |||||||||||||
Sbjct: 17449 acgtttcccttctca 17463
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>ref|NM_122014.2| Arabidopsis thaliana hydrolase AT5G20070 mRNA, complete cds
          Length = 1524

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  aagcaaagaaacccaccatcaactggcatggcatggtatttggcccaacaggccatggtt 544
            ||||||||||||| | |||||| |||||||||||| || |||| || |||||||| || |
Sbjct: 1021 aagcaaagaaaccgagcatcaattggcatggcatgctacttggtcccacaggccaaggct 962

                                                                     
Query: 545  gagaactgtggtaaacgacttgcccaacttcaatcccagtttcttcccatgtttccc 601
            |||| |||||||| || || |  || |||||||| || || ||||||||||||||||
Sbjct: 961  gagagctgtggtatacaacatctcctacttcaatgcctgtctcttcccatgtttccc 905
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>gb|AY090287.1| Arabidopsis thaliana AT5g20070/F28I16_220 mRNA, complete cds
          Length = 1317

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                       
Query: 485 aagcaaagaaacccaccatcaactggcatggcatggtatttggcccaacaggccatggtt 544
           ||||||||||||| | |||||| |||||||||||| || |||| || |||||||| || |
Sbjct: 988 aagcaaagaaaccgagcatcaattggcatggcatgctacttggtcccacaggccaaggct 929

                                                                    
Query: 545 gagaactgtggtaaacgacttgcccaacttcaatcccagtttcttcccatgtttccc 601
           |||| |||||||| || || |  || |||||||| || || ||||||||||||||||
Sbjct: 928 gagagctgtggtatacaacatctcctacttcaatgcctgtctcttcccatgtttccc 872
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>gb|AY049280.1| Arabidopsis thaliana AT5g20070/F28I16_220 mRNA, complete cds
          Length = 1505

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  aagcaaagaaacccaccatcaactggcatggcatggtatttggcccaacaggccatggtt 544
            ||||||||||||| | |||||| |||||||||||| || |||| || |||||||| || |
Sbjct: 1021 aagcaaagaaaccgagcatcaattggcatggcatgctacttggtcccacaggccaaggct 962

                                                                     
Query: 545  gagaactgtggtaaacgacttgcccaacttcaatcccagtttcttcccatgtttccc 601
            |||| |||||||| || || |  || |||||||| || || ||||||||||||||||
Sbjct: 961  gagagctgtggtatacaacatctcctacttcaatgcctgtctcttcccatgtttccc 905
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>emb|BX832211.1|CNS09ZQ1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH59ZE12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1460

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  aagcaaagaaacccaccatcaactggcatggcatggtatttggcccaacaggccatggtt 544
            ||||||||||||| | |||||| |||||||||||| || |||| || |||||||| || |
Sbjct: 1010 aagcaaagaaaccgagcatcaattggcatggcatgctacttggtcccacaggccaaggct 951

                                                                     
Query: 545  gagaactgtggtaaacgacttgcccaacttcaatcccagtttcttcccatgtttccc 601
            |||| |||||||| || || |  || |||||||| || || ||||||||||||||||
Sbjct: 950  gagagctgtggtatacaacatctcctacttcaatgcctgtctcttcccatgtttccc 894
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>emb|BX833644.1|CNS09Z9Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL68ZA08 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1443

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 485  aagcaaagaaacccaccatcaactggcatggcatggtatttggcccaacaggccatggtt 544
            ||||||||||||| | |||||| |||||||||||| || ||||||| ||| |||| || |
Sbjct: 1004 aagcaaagaaaccgagcatcaattggcatggcatgctacttggccccacacgccaaggct 945

                                                                     
Query: 545  gagaactgtggtaaacgacttgcccaacttcaatcccagtttcttcccatgtttccc 601
            |||| |||||||| || || |  || |||||||| || ||  |||||||||||||||
Sbjct: 944  gagagctgtggtatacaacatctcctacttcaatgcctgtcccttcccatgtttccc 888
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>gb|AC008074.3| Homo sapiens BAC clone RP11-568N6 from 2, complete sequence
          Length = 198087

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 580    ccagtttcttcccatgtttcccttc 604
              |||||||||||||||||||||||||
Sbjct: 112426 ccagtttcttcccatgtttcccttc 112402
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>gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete sequence
          Length = 114996

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                         
Query: 533   caggccatggttgagaactgtggtaaacgacttgcccaacttcaatcccagtttcttccc 592
             |||||||||| ||||||||||| || || ||||  || |||||||| ||| | |||||||
Sbjct: 37027 caggccatggctgagaactgtgatatacaacttctcccacttcaataccactctcttccc 36968

                          
Query: 593   atgtttcccttct 605
             | ||||| |||||
Sbjct: 36967 aagtttctcttct 36955
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>gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16
          Length = 84334

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 485   aagcaaagaaacccaccatcaactggcatggcatg 519
             ||||||||||||| | |||||| ||||||||||||
Sbjct: 70612 aagcaaagaaaccgagcatcaattggcatggcatg 70578



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 533   caggccatggttgagaactgtggtaaacgacttgcccaacttcaatcccagtttcttccc 592
             ||||||| || ||||| |||||||| || || |  || |||||||| || || |||||||
Sbjct: 70069 caggccaaggctgagagctgtggtatacaacatctcctacttcaatgcctgtctcttccc 70010

                      
Query: 593   atgtttccc 601
             |||||||||
Sbjct: 70009 atgtttccc 70001
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>ref|XM_676883.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8706.2), mRNA
          Length = 705

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                             
Query: 574 tcaatcccagtttcttcccatgtt-tcccttctc 606
           ||||||||||||||||||| |||| |||||||||
Sbjct: 382 tcaatcccagtttcttcccctgttgtcccttctc 349
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>gb|AC120181.10| Mus musculus chromosome 12, clone RP24-500I11, complete sequence
          Length = 212015

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 580   ccagtttcttcccatgtttcc 600
             |||||||||||||||||||||
Sbjct: 63316 ccagtttcttcccatgtttcc 63296
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>gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, complete sequence
          Length = 236838

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 580    ccagtttcttcccatgtttcc 600
              |||||||||||||||||||||
Sbjct: 210753 ccagtttcttcccatgtttcc 210733
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>emb|AL445564.1|MPULM02 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 2/3
          Length = 321250

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 439    tcttcaagctcttttttatcaacat 463
              |||||||||||||||||||| ||||
Sbjct: 131514 tcttcaagctcttttttatctacat 131490
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>emb|BX324131.6| Zebrafish DNA sequence from clone CH211-119E14 in linkage group 7,
              complete sequence
          Length = 198318

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 348    gttgaccttgagcgcacttga 368
              |||||||||||||||||||||
Sbjct: 175172 gttgaccttgagcgcacttga 175152
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>dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, section 52/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 582   agtttcttcccatgtttcccttctc 606
             ||||||||||| |||||||||||||
Sbjct: 30204 agtttcttcccgtgtttcccttctc 30228
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 441     ttcaagctcttttttatcaac 461
               |||||||||||||||||||||
Sbjct: 4742499 ttcaagctcttttttatcaac 4742519
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>dbj|AP000885.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B680H4, SOD-AML
             region, complete sequence
          Length = 86719

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 582   agtttcttcccatgtttcccttctc 606
             ||||||||||| |||||||||||||
Sbjct: 76671 agtttcttcccgtgtttcccttctc 76695
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>ref|NM_180794.1| Arabidopsis thaliana unknown protein AT5G43560 transcript variant
            AT5G43560.1 mRNA, complete cds
          Length = 3788

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   tcctcttttgcccttctgtt 32
            ||||||||||||||||||||
Sbjct: 1820 tcctcttttgcccttctgtt 1801
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>ref|NM_123722.3| Arabidopsis thaliana unknown protein AT5G43560 transcript variant
            AT5G43560.2 mRNA, complete cds
          Length = 3418

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   tcctcttttgcccttctgtt 32
            ||||||||||||||||||||
Sbjct: 1450 tcctcttttgcccttctgtt 1431
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>gb|BC078158.1| Homo sapiens cDNA clone IMAGE:6160021, partial cds
          Length = 3658

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  atttagcataagcaaagaaa 495
            ||||||||||||||||||||
Sbjct: 1239 atttagcataagcaaagaaa 1220
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>ref|NM_138473.2| Homo sapiens Sp1 transcription factor (SP1), mRNA
          Length = 7667

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  atttagcataagcaaagaaa 495
            ||||||||||||||||||||
Sbjct: 4453 atttagcataagcaaagaaa 4434
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>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome
          Length = 1044459

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    gggcatcttcaagctctttt 453
              ||||||||||||||||||||
Sbjct: 344552 gggcatcttcaagctctttt 344533
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>emb|CR626884.13| Zebrafish DNA sequence from clone DKEY-83H2 in linkage group 15, complete
              sequence
          Length = 207732

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    cttttttatcaacatgtatg 468
              ||||||||||||||||||||
Sbjct: 181405 cttttttatcaacatgtatg 181424
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>gb|BC012008.1| Homo sapiens Sp1 transcription factor, mRNA (cDNA clone
            IMAGE:4516234), complete cds
          Length = 1510

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  atttagcataagcaaagaaa 495
            ||||||||||||||||||||
Sbjct: 1305 atttagcataagcaaagaaa 1286
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>gb|AC124724.4| Mus musculus BAC clone RP23-446L16 from chromosome 19, complete
             sequence
          Length = 179952

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   acttgcccaacttcaatccc 581
             ||||||||||||||||||||
Sbjct: 71496 acttgcccaacttcaatccc 71515
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>gb|AC095025.2| Sus scrofa clone RP44-93L12, complete sequence
          Length = 176757

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   cacggctgtgccactgggca 438
             ||||||||||||||||||||
Sbjct: 14023 cacggctgtgccactgggca 14004
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>gb|AY050808.2| Arabidopsis thaliana At5g43560 mRNA sequence
          Length = 1564

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   tcctcttttgcccttctgtt 32
            ||||||||||||||||||||
Sbjct: 1433 tcctcttttgcccttctgtt 1414
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>emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             6/6
          Length = 155932

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   aagctcttttttatcaacat 463
             ||||||||||||||||||||
Sbjct: 72780 aagctcttttttatcaacat 72799
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>gb|AY078956.1| Arabidopsis thaliana AT5g43560/K9D7_6 mRNA, complete cds
          Length = 3789

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   tcctcttttgcccttctgtt 32
            ||||||||||||||||||||
Sbjct: 1821 tcctcttttgcccttctgtt 1802
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>dbj|AB169821.1| Macaca fascicularis brain cDNA, clone: QflA-10702, similar to human
           ornithine decarboxylase antizyme 2 (OAZ2), mRNA, RefSeq:
           NM_002537.1
          Length = 1976

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 296 cgctgaggtcggaggaggtgctcggccc 323
           ||||||||  ||||||||||||||||||
Sbjct: 18  cgctgaggcaggaggaggtgctcggccc 45
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>gb|AC068889.35| Homo sapiens 12 BAC RP11-774I22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 73433

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   atttagcataagcaaagaaa 495
             ||||||||||||||||||||
Sbjct: 38979 atttagcataagcaaagaaa 38998
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>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome
          Length = 1042519

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    gggcatcttcaagctctttt 453
              ||||||||||||||||||||
Sbjct: 342302 gggcatcttcaagctctttt 342283
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>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7
          Length = 60476

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    tcctcttttgcccttctgtt 32
             ||||||||||||||||||||
Sbjct: 27252 tcctcttttgcccttctgtt 27233
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>emb|AL672233.18| Mouse DNA sequence from clone RP23-54I20 on chromosome X, complete
             sequence
          Length = 163349

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 580   ccagtttcttcccatgtttccctt 603
             |||||| |||||||||||||||||
Sbjct: 55555 ccagttacttcccatgtttccctt 55578
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>emb|AL772149.4| Mouse DNA sequence from clone RP23-108H7 on chromosome 2, complete
             sequence
          Length = 196676

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   acttcaatcccagtttcttc 590
             ||||||||||||||||||||
Sbjct: 28344 acttcaatcccagtttcttc 28363
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>gb|AC095023.2| Sus scrofa clone RP44-405I2, complete sequence
          Length = 51739

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   cacggctgtgccactgggca 438
             ||||||||||||||||||||
Sbjct: 44764 cacggctgtgccactgggca 44745


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,494,201
Number of Sequences: 3902068
Number of extensions: 4494201
Number of successful extensions: 84431
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84305
Number of HSP's gapped (non-prelim): 126
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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