>ZNF45_HUMAN (Q02386) Zinc finger protein 45 (BRC1744)|
          Length = 682

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = -2

Query: 672 KDLVTFKSSGYSATDAEKEAIDSANEKAEENTMLQNVDPVTDSSNVVASGEESKPDG 502
           K+ VTFK      ++ E + +D A  K   + ML+N        NVV+ G +S PDG
Sbjct: 5   KEAVTFKDVAVVFSEEELQLLDLAQRKLYRDVMLENF------RNVVSVGHQSTPDG 55

>ENV_EIAVC (P32541) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP90; Coat protein GP45]
          Length = 859

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
 Frame = -2

Query: 606 SANEKAEENTMLQNVDPVTDSSNVVASGEESKPDGSGAP--------RNVWWQKQLISLY 451
           S   K EENTM Q      DS N +A  +E++               RN WW+K +  L 
Sbjct: 22  SEKSKCEENTMFQPYCYNNDSKNSMAESKEARDQEMNLKEESKEEKRRNDWWKKGMFLLC 81

Query: 450 RSAKESNKLW 421
            +      LW
Sbjct: 82  LAGTTGGILW 91

>HXB3A_BRARE (O42368) Homeobox protein Hox-B3a (Hox-B3)|
          Length = 417

 Score = 33.1 bits (74), Expect = 0.78
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = -2

Query: 654 KSSGYSATDAEKEAIDSANEKAEENTMLQNVDPVTDSSNVVASGEESKPDGSGA---PRN 484
           KSS  +      + I    +++ +NT  +N  P   S+N  +SG E  P GS A    R 
Sbjct: 126 KSSSMATNPTLTKQIFPWMKESRQNTKQKNSSPSASSANAESSGGEKSPPGSAASKRART 185

Query: 483 VWWQKQLISL 454
            +   QL+ L
Sbjct: 186 AYTSAQLVEL 195

>COG5_YEAST (P53951) Conserved oligomeric Golgi complex component 5 (Complexed|
           with DOR1 protein 4)
          Length = 403

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 14/68 (20%)
 Frame = -2

Query: 630 DAEKEAIDSANEKAEENTMLQNV--DPVTDSSNVVASGEE------------SKPDGSGA 493
           DA  E ++         T+LQN+  D VT+SS  +A+ +                 GSG 
Sbjct: 272 DAFNEVVEKGYNIYILETLLQNIKTDNVTNSSRSIAANKSRLGNLLSEYTSMKSKAGSGT 331

Query: 492 PRNVWWQK 469
           PR+++W K
Sbjct: 332 PRDLFWSK 339

>BPAEA_HUMAN (O94833) Bullous pemphigoid antigen 1, isoforms 6/9/10|
            (Trabeculin-beta) (Bullous pemphigoid antigen) (BPA)
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 5171

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 20/70 (28%), Positives = 31/70 (44%)
 Frame = -2

Query: 633  TDAEKEAIDSANEKAEENTMLQNVDPVTDSSNVVASGEESKPDGSGAPRNVWWQKQLISL 454
            TD E         K+ E  + QNV+ V +  + +    E  PD   APR   W++ L  +
Sbjct: 2134 TDTEAVKTQVEQNKSFEAELKQNVNKVQELKDKLTELLEENPDTPEAPR---WKQMLTEI 2190

Query: 453  YRSAKESNKL 424
                +E N+L
Sbjct: 2191 DSKWQELNQL 2200


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,172,079
Number of Sequences: 219361
Number of extensions: 2016163
Number of successful extensions: 6202
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6199
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)