Clone Name | rbasdg21 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | OPA3_SCHPO (Q9P7W0) Putative OPA3-like protein C1703.11 | 38 | 0.006 | 2 | OPA32_DROME (Q9VCG3) Putative OPA3-like protein CG13603 | 35 | 0.070 | 3 | OPA3_HUMAN (Q9H6K4) Optic atrophy 3 protein | 30 | 1.3 |
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>OPA3_SCHPO (Q9P7W0) Putative OPA3-like protein C1703.11| Length = 218 Score = 38.1 bits (87), Expect = 0.006 Identities = 17/36 (47%), Positives = 24/36 (66%) Frame = -1 Query: 170 NVAIRPLDEXKAVQVATDLIGEGFIFSVAVXALIFE 63 NV +RPL++ KAV + E FIF+VA A++FE Sbjct: 64 NVRLRPLNDAKAVDAGATFLSETFIFTVAGGAILFE 99
>OPA32_DROME (Q9VCG3) Putative OPA3-like protein CG13603| Length = 255 Score = 34.7 bits (78), Expect = 0.070 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -1 Query: 167 VAIRPLDEXKAVQVATDLIGEGFIFSVAVXALIFE 63 V + PL+E A+++ +L+GE IFS+ LIFE Sbjct: 67 VNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIFE 101
>OPA3_HUMAN (Q9H6K4) Optic atrophy 3 protein| Length = 179 Score = 30.4 bits (67), Expect = 1.3 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -1 Query: 191 RIYGHATNVAIRPLDEXKAVQVATDLIGEGFIFSVAVXALIFE 63 RI G V I+PL+E A ++ +L+GE IF V L+ E Sbjct: 59 RIMGFRGTV-IKPLNEEAAAELGAELLGEATIFIVGGGCLVLE 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,045,150 Number of Sequences: 219361 Number of extensions: 187954 Number of successful extensions: 450 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 448 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 450 length of database: 80,573,946 effective HSP length: 42 effective length of database: 71,360,784 effective search space used: 1712658816 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)