>NHX2_ARATH (Q56XP4) Sodium/hydrogen exchanger 2 (Na(+)/H(+) exchanger 2)|
           (NHE-2)
          Length = 546

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 28/64 (43%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 489 LLGSDFDVGQLTPQTN-LQYLLTMPTRSVHRVWRKFDDKFMXXXXXXXXXXXXXXGSPIE 313
           L GS  DV    P+ N L+  L  PTR+VH  WR+FDD FM              GSP E
Sbjct: 482 LPGSHQDV----PRPNSLRGFLMRPTRTVHYYWRQFDDAFMRPVFGGRGFVPFVPGSPTE 537

Query: 312 RSVH 301
           RS H
Sbjct: 538 RSSH 541

>NHX1_ARATH (Q68KI4) Sodium/hydrogen exchanger 1 (Na(+)/H(+) exchanger 1)|
           (NHE-1)
          Length = 538

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -3

Query: 444 NLQYLLTMPTRSVHRVWRKFDDKFMXXXXXXXXXXXXXXGSPIERS 307
           +++  LT PTR+VH  WR+FDD FM              GSP ER+
Sbjct: 486 SIRGFLTRPTRTVHYYWRQFDDSFMRPVFGGRGFVPFVPGSPTERN 531

>NHX4_ARATH (Q8S397) Sodium/hydrogen exchanger 4 (Na(+)/H(+) exchanger 4)|
           (NHE-4)
          Length = 529

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 444 NLQYLLTMPTRSVHRVWRKFDDKFM 370
           ++  L+  P  ++HR WRKFDD +M
Sbjct: 490 SISLLMEQPVYTIHRYWRKFDDTYM 514

>RPC2B_CHLRE (Q8HUH0) DNA-directed RNA polymerase beta' chain C-terminal subunit|
           (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'
           C-terminal section) (RNA polymerase beta' C-terminal
           section)
          Length = 489

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 37  PIVLSEQQRILQMKLYILNCSQKTTQLTWFYRNYLHNIHQHIATIHQ 177
           P++L  Q  +L       NC++K ++L      Y HNIH+ +   +Q
Sbjct: 246 PLILPSQDMVLGCYYLTTNCAEKWSKLKKGSGMYFHNIHEVLKAYNQ 292

>MAP1B_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Neuraxin)|
           [Contains: MAP1 light chain LC1]
          Length = 2459

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 10/44 (22%), Positives = 28/44 (63%)
 Frame = +1

Query: 7   LYMNVNIRIHPIVLSEQQRILQMKLYILNCSQKTTQLTWFYRNY 138
           L+ +V   I P++L ++  + ++K+Y+LN  + + ++ +F + +
Sbjct: 397 LFRSVGNAIEPVILFQKMGVGKLKMYVLNPVKSSKEMQYFMQQW 440

>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 284  PNKPGPWTLLSMGEPGTNGTKPLPPNIGRMNLSSNL 391
            P  PG +  +  GEPG   + P PP +     SS+L
Sbjct: 913  PKSPGEYINIDFGEPGARLSPPAPPLLASAASSSSL 948

>PLXD1_HUMAN (Q9Y4D7) Plexin-D1 precursor|
          Length = 1925

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 404 IVYGASSMISSCAQCLGEEASSHLCL 327
           +VY  +     C+QCLG E   HLC+
Sbjct: 845 MVYNCAMGSPDCSQCLGREDLGHLCM 870

>TSKS_RAT (P60531) Testis-specific serine kinase substrate (Testis-specific|
           kinase substrate) (STK22 substrate 1)
          Length = 585

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 384 RTCAIHDEPSELAL*EDTGGLFGGSAG 464
           + C++HD+ S L L   TG + GGS G
Sbjct: 546 KMCSLHDQLSHLPLEGSTGAMGGGSTG 572

>YLN2_CAEEL (Q18964) Hypothetical WD-repeat protein D2013.2|
          Length = 415

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 24/98 (24%), Positives = 33/98 (33%), Gaps = 15/98 (15%)
 Frame = -1

Query: 296 LACWAL*QRQKTVVKLKLRRCKYISCKCSDITQFCSWEFFWCIVAM-------------- 159
           L CW           +  +R +    K SD  Q C+  FFW + AM              
Sbjct: 271 LMCW----------DMNCKRVETPEWKTSDCCQKCNQPFFWNLQAMWQRKVVGLRQHHCR 320

Query: 158 -CWCILCR*FL*NHVSCVVFWEQFKMYNFICKIRCCSD 48
            C   +C        SC   W  +    +  KIR C+D
Sbjct: 321 TCGSAVCG-------SCCDNWTTYPPMGYETKIRICND 351

>MATC_NEUCR (Q10115) Mating-type protein A-2 (Mt A-2)|
          Length = 373

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 151 HQHIATIHQKNSQEQN*VISEHLQEIYLHLLSFNLTT 261
           HQ +ATIH +N   Q    +   QE  L  L F +TT
Sbjct: 266 HQRVATIHTENGHVQPPAPTSIQQEALLRKLDFAMTT 302

>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low density|
            lipoprotein receptor defect B-complementing protein)
          Length = 980

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 225  NILAPSELQLNYGFLPLSQCPTSQVHGRSSLWVNQAQMG 341
            NIL  +  Q+ +G LPLS   T +    S     QAQ+G
Sbjct: 898  NILPLASSQIRFGLLPLSMTSTRKARATSRSVETQAQVG 936

>RECF_CLOPE (Q8XPF9) DNA replication and repair protein recF|
          Length = 361

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +1

Query: 112 QLTWFYRNYLHNIHQHIATIHQKNSQEQN*VISEHLQEIY 231
           +L+   + Y HN+ Q+   +H++N   +N  I+E + +IY
Sbjct: 139 ELSQLNKRYYHNLVQYNKVLHERNLVLKNKNINEEMLDIY 178

>HDAC4_HUMAN (P56524) Histone deacetylase 4 (HD4)|
          Length = 1084

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +1

Query: 46  LSEQQRILQMKLYILNCSQKTTQ---LTWFYRNYLHNIHQHIATIHQKNSQEQN*VISEH 216
           L EQQ  LQ +L  L   Q+  +   +  F R +     QH A +H+   Q+Q  +  +H
Sbjct: 66  LREQQ--LQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMKH 123

Query: 217 LQEIYLH 237
            QE+  H
Sbjct: 124 QQELLEH 130

>ENP1_TORCA (P14400) Electromotor neuron-associated protein 1 (Fragment)|
          Length = 721

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 12/47 (25%), Positives = 29/47 (61%)
 Frame = +1

Query: 7   LYMNVNIRIHPIVLSEQQRILQMKLYILNCSQKTTQLTWFYRNYLHN 147
           L+  V   I P++L ++  + ++++YILN  + + +L +F +++  N
Sbjct: 403 LFRTVGNVIDPVILFQKMGVGRLEMYILNSVKGSKELQFFMQHWSSN 449

>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)|
          Length = 1321

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 278  TVPNKPGPWTLLSMGEPGTNGTKPLPPNIGRMNLSSNL 391
            T P  PG +  +  GE GT  + P PP +     SS+L
Sbjct: 903  TEPKSPGEYINIDPGEAGTRLSPPAPPLLASAASSSSL 940

>OTO1_ONCKE (P83371) Otolin-1 precursor|
          Length = 508

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 281 VPNKPGPWTLLSMGEPGTNGTKPLPPNIG 367
           +P  PGP  L+  G PG NGT  LP  +G
Sbjct: 294 LPGPPGPRGLV--GTPGVNGTNGLPGPVG 320


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,736,644
Number of Sequences: 219361
Number of extensions: 1662480
Number of successful extensions: 4665
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4664
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)