ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| basd3o10 | 510 | AV923124 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 412 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 166 | -- | --- | - | -- | --- | - |
| basd3o08 | 606 | AV923123 | not_full | emb|Z21510.1|TATRINF4A T.aestivum translation initiation factor 4A Length = 1715 | 500 | not_full | IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 | 500 | -- | --- | - | -- | --- | - |
| basd3o06 | 628 | AV923122 | not_full | gb|AF021939.1|AF021939 Hordeum vulgare catalase 2 (CAT2) gene, partial cds Length = 1326 | 214 | not_full | CATA2_HORVU (P55308) Catalase isozyme 2 (EC 1.11.1.6) Length = 494 | 136 | -- | --- | - | -- | --- | - |
| basd3o05 | 620 | AV923121 | not_full | emb|AJ577363.1|TAE577363 Triticum aestivum partial mRNA for putative F-box protein Length = 595 | 35 | not_full | UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein (F-box only protein 1) (AtFBX1) Length = 442 | 8 | -- | --- | - | -- | --- | - |
| basd3o03 | 591 | AV923120 | not_full | gb|AY103959.1| Zea mays PCO068678 mRNA sequence Length = 1621 | 77 | not_full | PA2G4_HUMAN (Q9UQ80) Proliferation-associated protein 2G4 (Cell cycle protein p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1) Length = 393 | 18 | -- | --- | - | -- | --- | - |
| basd3o01 | 433 | AV923119 | not_full | gb|AF542973.1| Triticum aestivum cyclophilin mRNA, partial cds Length = 806 | 237 | not_full | CP18C_ARATH (P34790) Peptidyl-prolyl cis-trans isomerase CYP18-3 (EC 5.2.1.8) (PPIase CYP18-3) (Rotamase cyclophilin-1) (Cyclophilin of 18 kDa 3) (Cyclosporin A-binding protein) Length = 172 | 139 | -- | --- | - | -- | --- | - |
| basd3n24 | 580 | AV923118 | not_full | gb|BT009431.1| Triticum aestivum clone wlmk1.pk0035.e4:fis, full insert mRNA sequence Length = 1652 | 39 | not_full | ACOX4_ARATH (Q96329) Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short-chain acyl-CoA oxidase) (SAOX) (AtCX4) (G6p) (AtG6) Length = 436 | 60 | -- | --- | - | -- | --- | - |
| basd3n21 | 575 | AV923117 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3n20 | 485 | AV923116 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_AEGTA (P25414) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| basd3n19 | 607 | AV923115 | not_full | emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 | 202 | not_full | PAL1_ORYSA (P14717) Phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 701 | 65 | -- | --- | - | -- | --- | - |
| basd3n14 | 610 | AV923114 | full | gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 | 406 | full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 116 | -- | --- | - | -- | --- | - |
| basd3n12 | 603 | AV923113 | not_full | gb|AF465840.1| Hordeum vulgare subsp. vulgare cold acclimation WCOR413-like protein gamma form mRNA, complete cds Length = 919 | 500 | not_full | ADEN_ADEB4 (O71150) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3 23 kDa protein) Length = 201 | 1 | -- | --- | - | -- | --- | - |
| basd3n11 | 172 | AV923112 | full | emb|AJ278817.1|HVU278817 Hordeum vulgare partial mRNA for putative cysteine protease (pCYSPROT gene) Length = 412 | 95 | not_full | ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-) Length = 471 | 177 | -- | --- | - | -- | --- | - |
| basd3n09 | 500 | AV923111 | not_full | gb|BT019230.1| Zea mays clone Contig903.F mRNA sequence Length = 727 | 107 | not_full | SAP_HUMAN (P07602) Proactivator polypeptide precursor [Contains: Saposin A (Protein A); Saposin B-Val; Saposin B (Sphingolipid activator protein 1) (SAP-1) (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sulfatide/GM1 activator); Saposin C (Co-beta- | 26 | -- | --- | - | -- | --- | - |
| basd3n08 | 626 | AV923110 | full | emb|Y09741.1|HVBTUBI Hordeum vulgare mRNA for beta-tubulin 1 Length = 1646 | 500 | full | TBB2_ELEIN (Q9ZPN9) Tubulin beta-2 chain (Beta-2 tubulin) Length = 448 | 391 | -- | --- | - | -- | --- | - |
| basd3n06 | 509 | AV836293 | not_full | gb|BT009004.1| Triticum aestivum clone wdk2c.pk018.c16:fis, full insert mRNA sequence Length = 1899 | 124 | not_full | KIN10_ARATH (Q38997) SNF1-related protein kinase catalytic alpha subunit KIN10 (EC 2.7.11.1) (AKIN10) (AKIN alpha2) Length = 535 | 500 | -- | --- | - | -- | --- | - |
| basd3n05 | 444 | AV923109 | not_full | dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M12, full insert sequence Length = 1188 | 252 | not_full | PSA5_ORYSA (Q9LSU1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5) Length = 237 | 173 | -- | --- | - | -- | --- | - |
| basd3n04 | 521 | AV923108 | not_full | ref|XM_467417.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3468 | 72 | not_full | BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted) Length = 1206 | 13 | -- | --- | - | -- | --- | - |
| basd3n02 | 592 | AV923107 | not_full | ref|XM_464101.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3420 | 88 | not_full | Y46K_DROME (P53404) Hypothetical protein CG10349 in chromosome 3 Length = 404 | 2 | -- | --- | - | -- | --- | - |
| basd3n01 | 575 | AV923106 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3m21 | 557 | AV923105 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 405 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| basd3m20 | 73 | AV836292 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd3m19 | 539 | AV923104 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3m18 | 500 | AV923103 | full | emb|AJ222778.1|HVJ222778 Hordeum vulgare mRNA for putative thiol protease, clone RG42 Length = 350 | 80 | not_full | BROM1_ANACO (O23791) Bromelain precursor (EC 3.4.22.32) (Allergen Ana c 2) Length = 351 | 102 | -- | --- | - | -- | --- | - |
| basd3m16 | 599 | AV923102 | not_full | gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 | 37 | not_full | CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 | 402 | -- | --- | - | -- | --- | - |
| basd3m15 | 562 | AV836291 | not_full | ref|XM_472753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1032 | 500 | full | NAC77_ORYSA (Q5CD17) NAC domain-containing protein 77 (ONAC077) (ONAC300) Length = 396 | 33 | -- | --- | - | -- | --- | - |
| basd3m14 | 571 | AV923101 | not_full | emb|Z21510.1|TATRINF4A T.aestivum translation initiation factor 4A Length = 1715 | 500 | not_full | IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 | 500 | -- | --- | - | -- | --- | - |
| basd3m13 | 606 | AV923100 | not_full | gb|BC079674.1| Mus musculus ubiquitin specific peptidase 20, mRNA (cDNA clone MGC:90775 IMAGE:30531994), complete cds Length = 5012 | 41 | not_full | ZDHC5_PANTR (Q2THX1) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc finger DHHC domain-containing protein 5) (DHHC-5) Length = 715 | 34 | -- | --- | - | -- | --- | - |
| basd3m12 | 535 | AV923099 | not_full | dbj|AK102913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113M01, full insert sequence Length = 2519 | 41 | not_full | YAA1_SCHPO (Q09795) Probable peptidase C22G7.01c (EC 3.4.-.-) Length = 598 | 18 | -- | --- | - | -- | --- | - |
| basd3m11 | 401 | AV923098 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 | 5 | -- | --- | - | -- | --- | - |
| basd3m08 | 618 | AV836290 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 64 | not_full | RN126_XENTR (Q6DIP3) RING finger protein 126 Length = 311 | 21 | -- | --- | - | -- | --- | - |
| basd3m07 | 585 | AV836289 | not_full | ref|XM_466651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2967 | 61 | not_full | VWF_MOUSE (Q8CIZ8) Von Willebrand factor precursor (vWF) [Contains: Von Willebrand antigen II] Length = 2813 | 12 | -- | --- | - | -- | --- | - |
| basd3m03 | 692 | AV923097 | not_full | ref|XM_466502.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3112 | 125 | not_full | IFEB_HELPO (P16275) Non-neuronal cytoplasmic intermediate filament protein B (IFB) Length = 450 | 21 | -- | --- | - | -- | --- | - |
| basd3m01 | 612 | AV923096 | not_full | dbj|AK066400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062O07, full insert sequence Length = 1416 | 46 | not_full | ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precursor Length = 253 | 49 | -- | --- | - | -- | --- | - |
| basd3l24 | 613 | AV923095 | not_full | gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence Length = 1457 | 148 | not_full | CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment) Length = 1027 | 12 | -- | --- | - | -- | --- | - |
| basd3l23 | 473 | AV923094 | not_full | gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 | 29 | not_full | BCK2_YEAST (P33306) Protein BCK2 (Bypass of kinase C protein) Length = 851 | 11 | -- | --- | - | -- | --- | - |
| basd3l20 | 680 | AV923093 | not_full | ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 | 82 | not_full | NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kinase anchor protein 550) (AKAP 550) (dAKAP550) Length = 3584 | 8 | -- | --- | - | -- | --- | - |
| basd3l18 | 633 | AV923092 | not_full | gb|AY103557.1| Zea mays PCO070710 mRNA sequence Length = 1761 | 500 | not_full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 72 | -- | --- | - | -- | --- | - |
| basd3l16 | 510 | AV923091 | full | emb|AJ278817.1|HVU278817 Hordeum vulgare partial mRNA for putative cysteine protease (pCYSPROT gene) Length = 412 | 150 | not_full | ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-) Length = 471 | 207 | -- | --- | - | -- | --- | - |
| basd3l15 | 532 | AV923090 | not_full | dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 | 240 | not_full | DGK3_CAEEL (Q03603) Probable diacylglycerol kinase 3 (EC 2.7.1.107) (Diglyceride kinase 3) (DGK-3) (DAG kinase 3) Length = 812 | 1 | -- | --- | - | -- | --- | - |
| basd3l13 | 600 | AV923089 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3l09 | 636 | AV923088 | not_full | gb|AF230786.1|AF230786 Hordeum vulgare human tumor protein-like protein mRNA, complete cds Length = 778 | 123 | not_full | TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein homolog (TCTP) (HTP) Length = 168 | 53 | -- | --- | - | -- | --- | - |
| basd3l08 | 677 | AV923087 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3l05 | 502 | AV923086 | not_full | dbj|AK104816.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H08, full insert sequence Length = 955 | 85 | not_full | MOAA_CORGL (Q8NR60) Molybdenum cofactor biosynthesis protein A Length = 377 | 4 | -- | --- | - | -- | --- | - |
| basd3l03 | 572 | AV923085 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3l02 | 607 | AV923084 | not_full | emb|X14107.1|CHHVPSBD Hordeum vulgare chloroplast psbB, psbH, petB and petD Length = 5221 | 290 | full | PSBH_HORVU (P12363) Photosystem II reaction center H protein (Photosystem II 10 kDa phosphoprotein) (PSII-H) Length = 72 | 57 | -- | --- | - | -- | --- | - |
| basd3l01 | 578 | AV923083 | not_full | gb|AF186240.1|AF186240 Secale cereale thioredoxin-like protein (Trx) mRNA, partial cds Length = 826 | 200 | not_full | TRXH_WHEAT (O64394) Thioredoxin H-type (TRX-H) (TrxTa) Length = 126 | 240 | -- | --- | - | -- | --- | - |
| basd3k22 | 542 | AV923082 | not_full | ref|XM_472416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 | 70 | not_full | S6A17_RAT (P31662) Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17) Length = 727 | 19 | -- | --- | - | -- | --- | - |
| basd3k21 | 548 | AV923081 | not_full | gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 | 102 | not_full | ASNS_SANAU (O24338) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 524 | 149 | -- | --- | - | -- | --- | - |
| basd3k20 | 646 | AV923080 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 130 | not_full | C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-) Length = 553 | 500 | -- | --- | - | -- | --- | - |
