ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3n24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009431.1| Triticum aestivum clone wlmk1.pk0035.e4:fis, full... 870 0.0
2dbj|AK071561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
3ref|XM_475647.1| Oryza sativa (japonica cultivar-group), predic... 387 e-104
4ref|XM_550215.1| Oryza sativa (japonica cultivar-group), mRNA 305 9e-80
5dbj|AK100550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 9e-80
6gb|AY107473.1| Zea mays PCO132850 mRNA sequence 283 3e-73
7gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 200 4e-48
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
10dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
11dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
12gb|AY110040.1| Zea mays CL716_1 mRNA sequence 135 2e-28
13gb|AY600434.1| Tropaeolum majus putative short-chain acyl-CoA ox... 52 0.002
14ref|NM_115043.2| Arabidopsis thaliana ACX4 (ACYL-COA OXIDASE 4);... 48 0.032
15gb|AY125536.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complet... 48 0.032
16gb|AY094441.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complet... 48 0.032
17dbj|AK222131.1| Arabidopsis thaliana mRNA for Short-chain acyl C... 48 0.032
18gb|AY087793.1| Arabidopsis thaliana clone 3844 mRNA, complete se... 48 0.032
19dbj|AB017643.1| Arabidopsis thaliana mRNA for Short-chain acyl C... 48 0.032
20gb|U72505.1|ATU72505 Arabidopsis thaliana putative acyl-coA dehy... 48 0.032
21gb|AC091152.18| Homo sapiens chromosome 17, clone RP11-1072C15, ... 42 2.0
22gb|AC040970.7| Homo sapiens chromosome 8, clone RP11-809O17, com... 42 2.0
23gb|AC010422.7| Homo sapiens chromosome 19 clone CTD-2192J16, com... 42 2.0
24gb|AC036214.9| Homo sapiens chromosome 8, clone RP11-26J3, compl... 42 2.0
25gb|AC018952.9| Homo sapiens chromosome 8, clone RP11-498N9, comp... 42 2.0
26gb|AC068056.7| Homo sapiens BAC clone RP11-84M3 from 2, complete... 42 2.0
27gb|AC097264.4| Pan troglodytes BAC RP43-175I2 (Roswell Park Canc... 42 2.0
28gb|AC150499.3| Bos taurus BAC CH240-105M18 (Children's Hospital... 40 7.9
29emb|Z81042.1|CEC27H6 Caenorhabditis elegans Cosmid C27H6, comple... 40 7.9
30gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome... 40 7.9
31gb|AC099849.4| Homo sapiens chromosome 18, clone RP11-863N1, com... 40 7.9
32gb|AY170465.1| Leishmania mexicana mexicana alpha adaptin gene, ... 40 7.9
33ref|XM_793364.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.9
34emb|AL356742.12| Human DNA sequence from clone RP11-216C10 on ch... 40 7.9
35ref|XM_794083.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.9
36emb|CR857871.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0226 (from cl... 40 7.9
37gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, c... 40 7.9
38gb|AC006546.9| Homo sapiens chromosome 18 clone p1-1029 map 18q1... 40 7.9
39gb|AC006545.3| Homo sapiens chromosome 18 clone p1-1028 map 18q1... 40 7.9 
>gb|BT009431.1| Triticum aestivum clone wlmk1.pk0035.e4:fis, full insert mRNA
            sequence
          Length = 1652

 Score =  870 bits (439), Expect = 0.0
 Identities = 506/527 (96%), Gaps = 1/527 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggaagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcgga 61
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1051 ggaagcagtttggagctcccctggcagcctttcagctcaaccaagaaaagcttgttcgga 1110

                                                                        
Query: 62   tgcttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagt 121
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1111 tgcttggtaacatccaggccatgctccttgtcggctggcgcttgtgcaagctctatgagt 1170

                                                                        
Query: 122  caggcaaaatgacaccaggccatgctagtttgggcaaggcatggacgtccagcaagtcaa 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 caggcaaaatgacaccaggccatgctagtttgggcaaggcatggacgtccagcaagtcaa 1230

                                                                        
Query: 182  gggaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttc 241
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1231 gggaggtagtttctctgggccgagagctattgggcggcaatggaattttggctgattttt 1290

                                                                        
Query: 242  tagtagcaaaggcgttctgtgatctggagccgatttactcatacgagggcacctatgaca 301
            ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 1291 tagtagcaaaggcgttctgcgatctggaaccgatttactcatatgagggcacctacgaca 1350

                                                                        
Query: 302  tcaacagccttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcag 361
            ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |
Sbjct: 1351 tcaacagccttgtgaccggaagagaaatcaccgggatcgcgagcttcaaacctgctgcgg 1410

                                                                        
Query: 362  tagcaaaatctcggctgtaattcttcttctgcctccagctacgatgaacagcaaagtatg 421
            |||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 1411 tagcgaaatctcggctgtaattcttcttctgcctccagctttgatgaacagcaaagtatg 1470

                                                                        
Query: 422  accccccaccttgtattctggtgggtacgagtaagatcggaataagtgcaatggaatgat 481
            ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 1471 acccccc-ccttgtattctggtgggtacgagtaagatcggaataagtgcaaccgaatgat 1529

                                                           
Query: 482  caaatgtaatttgtaaggcggaaggataaagtcggagctggatttgt 528
            |||||||||| ||||| ||| ||| ||||||||||||||||||||||
Sbjct: 1530 caaatgtaatctgtaaagcgaaagaataaagtcggagctggatttgt 1576
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>dbj|AK071561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099O18, full
            insert sequence
          Length = 1568

 Score =  389 bits (196), Expect = e-105
 Identities = 334/380 (87%)
 Strand = Plus / Plus

                                                                        
Query: 4    aagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcggatg 63
            ||||| ||||||| |||  ||||||| |||||| |||||||||||||||||||||| |||
Sbjct: 1038 aagcaatttggagttccgttggcagcttttcagctcaaccaagaaaagcttgttcgcatg 1097

                                                                        
Query: 64   cttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagtca 123
            || || |||||||| |||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 1098 ctaggaaacatccaagccatgcttcttgtcggctggcgcctgtgcaagctgtatgaatca 1157

                                                                        
Query: 124  ggcaaaatgacaccaggccatgctagtttgggcaaggcatggacgtccagcaagtcaagg 183
            ||||||||||||||||||||||||||||| |||||||||||||| ||||  ||| | |||
Sbjct: 1158 ggcaaaatgacaccaggccatgctagtttaggcaaggcatggacatccaagaaggctagg 1217

                                                                        
Query: 184  gaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttcta 243
            ||||| |||||||| || || |||||| |||| || || |||||||||||||| ||||| 
Sbjct: 1218 gaggtggtttctcttggccgtgagctactgggtggaaacggaattttggctgactttctg 1277

                                                                        
Query: 244  gtagcaaaggcgttctgtgatctggagccgatttactcatacgagggcacctatgacatc 303
            ||||||||||||||||||||||||||||| || | ||| ||||| |||||||||||||||
Sbjct: 1278 gtagcaaaggcgttctgtgatctggagccaatcttctcgtacgaaggcacctatgacatc 1337

                                                                        
Query: 304  aacagccttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcagta 363
            |||||| | |||||||||||||| ||||| || ||||| ||||||||||| |||||| | 
Sbjct: 1338 aacagcttggtgaccggaagagagatcaccggaatcgccagcttcaaacctgctgcattg 1397

                                
Query: 364  gcaaaatctcggctgtaatt 383
             |||||||||| || |||||
Sbjct: 1398 acaaaatctcgtctttaatt 1417
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>ref|XM_475647.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score =  387 bits (195), Expect = e-104
 Identities = 327/371 (88%)
 Strand = Plus / Plus

                                                                        
Query: 4    aagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcggatg 63
            ||||| ||||||| |||  ||||||| |||||| |||||||||||||||||||||| |||
Sbjct: 916  aagcaatttggagttccgttggcagcttttcagctcaaccaagaaaagcttgttcgcatg 975

                                                                        
Query: 64   cttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagtca 123
            || || |||||||| |||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 976  ctaggaaacatccaagccatgcttcttgtcggctggcgcctgtgcaagctgtatgaatca 1035

                                                                        
Query: 124  ggcaaaatgacaccaggccatgctagtttgggcaaggcatggacgtccagcaagtcaagg 183
            ||||||||||||||||||||||||||||| |||||||||||||| ||||  ||| | |||
Sbjct: 1036 ggcaaaatgacaccaggccatgctagtttaggcaaggcatggacatccaagaaggctagg 1095

                                                                        
Query: 184  gaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttcta 243
            ||||| |||||||| || || |||||| |||| || || |||||||||||||| ||||| 
Sbjct: 1096 gaggtggtttctcttggccgtgagctactgggtggaaacggaattttggctgactttctg 1155

                                                                        
Query: 244  gtagcaaaggcgttctgtgatctggagccgatttactcatacgagggcacctatgacatc 303
            ||||||||||||||||||||||||||||| || | ||| ||||| |||||||||||||||
Sbjct: 1156 gtagcaaaggcgttctgtgatctggagccaatcttctcgtacgaaggcacctatgacatc 1215

                                                                        
Query: 304  aacagccttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcagta 363
            |||||| | |||||||||||||| ||||| || ||||| ||||||||||| |||||| | 
Sbjct: 1216 aacagcttggtgaccggaagagagatcaccggaatcgccagcttcaaacctgctgcattg 1275

                       
Query: 364  gcaaaatctcg 374
             ||||||||||
Sbjct: 1276 acaaaatctcg 1286
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>ref|XM_550215.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1979

 Score =  305 bits (154), Expect = 9e-80
 Identities = 319/374 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggaagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcgga 61
            |||| |||||||||| ||| || | ||| |||||| | ||||||||||| ||||| || |
Sbjct: 1049 ggaaacagtttggagttcctctagtagcttttcagctgaaccaagaaaaacttgtgcgaa 1108

                                                                        
Query: 62   tgcttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagt 121
            |||||||||||||||| || ||||||||||| ||||||||  | |||||||| |||||||
Sbjct: 1109 tgcttggtaacatccaagcgatgcttcttgttggctggcgactatgcaagctttatgagt 1168

                                                                        
Query: 122  caggcaaaatgacaccaggccatgctagtttgggcaaggcatggacgtccagcaagtcaa 181
            |||| |||||||||||||| ||||||||||| || ||||  ||||| ||||| | | |  
Sbjct: 1169 cagggaaaatgacaccagggcatgctagtttagggaagggttggacttccagaatggctc 1228

                                                                        
Query: 182  gggaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttc 241
            | ||||| |||||||| ||||||||  | ||||| || ||||||||||||||||||||||
Sbjct: 1229 gtgaggtggtttctctcggtcgagaattgttgggtggaaatggaattttggctgattttc 1288

                                                                        
Query: 242  tagtagcaaaggcgttctgtgatctggagccgatttactcatacgagggcacctatgaca 301
            |||| |||||||| |||||||| |||||||| || ||||||||||| ||||| || ||||
Sbjct: 1289 tagttgcaaaggcattctgtgacctggagcctatatactcatacgaaggcacatacgaca 1348

                                                                        
Query: 302  tcaacagccttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcag 361
            |||||||||| ||||| || |||||||| ||||||||||| ||||||||||| || ||| 
Sbjct: 1349 tcaacagcctggtgactggtagagaaataactgggatcgcaagcttcaaacctgccgcat 1408

                          
Query: 362  tagcaaaatctcgg 375
            |||||||| |||||
Sbjct: 1409 tagcaaaagctcgg 1422
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>dbj|AK100550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103E08, full
            insert sequence
          Length = 1979

 Score =  305 bits (154), Expect = 9e-80
 Identities = 319/374 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggaagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcgga 61
            |||| |||||||||| ||| || | ||| |||||| | ||||||||||| ||||| || |
Sbjct: 1049 ggaaacagtttggagttcctctagtagcttttcagctgaaccaagaaaaacttgtgcgaa 1108

                                                                        
Query: 62   tgcttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagt 121
            |||||||||||||||| || ||||||||||| ||||||||  | |||||||| |||||||
Sbjct: 1109 tgcttggtaacatccaagcgatgcttcttgttggctggcgactatgcaagctttatgagt 1168

                                                                        
Query: 122  caggcaaaatgacaccaggccatgctagtttgggcaaggcatggacgtccagcaagtcaa 181
            |||| |||||||||||||| ||||||||||| || ||||  ||||| ||||| | | |  
Sbjct: 1169 cagggaaaatgacaccagggcatgctagtttagggaagggttggacttccagaatggctc 1228

                                                                        
Query: 182  gggaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttc 241
            | ||||| |||||||| ||||||||  | ||||| || ||||||||||||||||||||||
Sbjct: 1229 gtgaggtggtttctctcggtcgagaattgttgggtggaaatggaattttggctgattttc 1288

                                                                        
Query: 242  tagtagcaaaggcgttctgtgatctggagccgatttactcatacgagggcacctatgaca 301
            |||| |||||||| |||||||| |||||||| || ||||||||||| ||||| || ||||
Sbjct: 1289 tagttgcaaaggcattctgtgacctggagcctatatactcatacgaaggcacatacgaca 1348

                                                                        
Query: 302  tcaacagccttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcag 361
            |||||||||| ||||| || |||||||| ||||||||||| ||||||||||| || ||| 
Sbjct: 1349 tcaacagcctggtgactggtagagaaataactgggatcgcaagcttcaaacctgccgcat 1408

                          
Query: 362  tagcaaaatctcgg 375
            |||||||| |||||
Sbjct: 1409 tagcaaaagctcgg 1422
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>gb|AY107473.1| Zea mays PCO132850 mRNA sequence
          Length = 1709

 Score =  283 bits (143), Expect = 3e-73
 Identities = 296/347 (85%)
 Strand = Plus / Plus

                                                                        
Query: 4    aagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcggatg 63
            ||||| ||||||||||| |||||||| |||||| |||| |||||||||||||| || |||
Sbjct: 1075 aagcaatttggagctccactggcagcttttcagctcaatcaagaaaagcttgtccgcatg 1134

                                                                        
Query: 64   cttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagtca 123
            ||||| ||||| ||||| |||||||| || || |||||  |||||||||| |||||||||
Sbjct: 1135 cttggcaacattcaggctatgcttctcgttggatggcgactgtgcaagctgtatgagtca 1194

                                                                        
Query: 124  ggcaaaatgacaccaggccatgctagtttgggcaaggcatggacgtccagcaagtcaagg 183
            |||||||||||||||||||   ||||||| || ||||||||||||||||  ||| | |||
Sbjct: 1195 ggcaaaatgacaccaggccggtctagtttaggtaaggcatggacgtccaagaaggccagg 1254

                                                                        
Query: 184  gaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttcta 243
            ||||| |||||||| || ||||||||| |||| |||||||| ||||||| ||||||||| 
Sbjct: 1255 gaggtggtttctcttgggcgagagctactgggtggcaatggcattttggttgattttctt 1314

                                                                        
Query: 244  gtagcaaaggcgttctgtgatctggagccgatttactcatacgagggcacctatgacatc 303
            || || ||||| || |||||  |||| || |||| ||| |||||||||||||||||||| 
Sbjct: 1315 gtcgccaaggcattttgtgacgtggaacccattttctcgtacgagggcacctatgacatt 1374

                                                           
Query: 304  aacagccttgtgaccggaagagaaatcactgggatcgcgagcttcaa 350
            || ||||| ||| | || ||||| ||||| |||||||||||||||||
Sbjct: 1375 aatagcctggtggctggcagagagatcaccgggatcgcgagcttcaa 1421
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>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score =  200 bits (101), Expect = 4e-48
 Identities = 143/157 (91%)
 Strand = Plus / Minus

                                                                         
Query: 4     aagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcggatg 63
             ||||| ||||||| |||  ||||||| |||||| |||||||||||||||||||||| |||
Sbjct: 93868 aagcaatttggagttccgttggcagcttttcagctcaaccaagaaaagcttgttcgcatg 93809

                                                                         
Query: 64    cttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagtca 123
             || || |||||||| |||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 93808 ctaggaaacatccaagccatgcttcttgtcggctggcgcctgtgcaagctgtatgaatca 93749

                                                  
Query: 124   ggcaaaatgacaccaggccatgctagtttgggcaagg 160
             ||||||||||||||||||||||||||||| |||||||
Sbjct: 93748 ggcaaaatgacaccaggccatgctagtttaggcaagg 93712



 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                         
Query: 251   aggcgttctgtgatctggagccgatttactcatacgagggcacctatgacatcaacagcc 310
             |||||||||||||||||||||| || | ||| ||||| ||||||||||||||||||||| 
Sbjct: 92874 aggcgttctgtgatctggagccaatcttctcgtacgaaggcacctatgacatcaacagct 92815

                                                                         
Query: 311   ttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcagtagcaaaat 370
             | |||||||||||||| ||||| || ||||| ||||||||||| |||||| |  ||||||
Sbjct: 92814 tggtgaccggaagagagatcaccggaatcgccagcttcaaacctgctgcattgacaaaat 92755

                          
Query: 371   ctcggctgtaatt 383
             |||| || |||||
Sbjct: 92754 ctcgtctttaatt 92742



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                         
Query: 158   aggcatggacgtccagcaagtcaagggaggtagtttctctgggtcgagagctattgggcg 217
             |||||||||| ||||  ||| | |||||||| |||||||| || || |||||| |||| |
Sbjct: 93593 aggcatggacatccaagaaggctagggaggtggtttctcttggccgtgagctactgggtg 93534

                                                 
Query: 218   gcaatggaattttggctgattttctagtagcaaagg 253
             | || |||||||||||||| ||||| ||||||||||
Sbjct: 93533 gaaacggaattttggctgactttctggtagcaaagg 93498
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  200 bits (101), Expect = 4e-48
 Identities = 143/157 (91%)
 Strand = Plus / Minus

                                                                           
Query: 4       aagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcggatg 63
               ||||| ||||||| |||  ||||||| |||||| |||||||||||||||||||||| |||
Sbjct: 3671521 aagcaatttggagttccgttggcagcttttcagctcaaccaagaaaagcttgttcgcatg 3671462

                                                                           
Query: 64      cttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagtca 123
               || || |||||||| |||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 3671461 ctaggaaacatccaagccatgcttcttgtcggctggcgcctgtgcaagctgtatgaatca 3671402

                                                    
Query: 124     ggcaaaatgacaccaggccatgctagtttgggcaagg 160
               ||||||||||||||||||||||||||||| |||||||
Sbjct: 3671401 ggcaaaatgacaccaggccatgctagtttaggcaagg 3671365



 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                           
Query: 251     aggcgttctgtgatctggagccgatttactcatacgagggcacctatgacatcaacagcc 310
               |||||||||||||||||||||| || | ||| ||||| ||||||||||||||||||||| 
Sbjct: 3670527 aggcgttctgtgatctggagccaatcttctcgtacgaaggcacctatgacatcaacagct 3670468

                                                                           
Query: 311     ttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcagtagcaaaat 370
               | |||||||||||||| ||||| || ||||| ||||||||||| |||||| |  ||||||
Sbjct: 3670467 tggtgaccggaagagagatcaccggaatcgccagcttcaaacctgctgcattgacaaaat 3670408

                            
Query: 371     ctcggctgtaatt 383
               |||| || |||||
Sbjct: 3670407 ctcgtctttaatt 3670395



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                           
Query: 158     aggcatggacgtccagcaagtcaagggaggtagtttctctgggtcgagagctattgggcg 217
               |||||||||| ||||  ||| | |||||||| |||||||| || || |||||| |||| |
Sbjct: 3671246 aggcatggacatccaagaaggctagggaggtggtttctcttggccgtgagctactgggtg 3671187

                                                   
Query: 218     gcaatggaattttggctgattttctagtagcaaagg 253
               | || |||||||||||||| ||||| ||||||||||
Sbjct: 3671186 gaaacggaattttggctgactttctggtagcaaagg 3671151
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  141 bits (71), Expect = 3e-30
 Identities = 131/151 (86%)
 Strand = Plus / Minus

                                                                           
Query: 2       ggaagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcgga 61
               |||| |||||||||| ||| || | ||| |||||| | ||||||||||| ||||| || |
Sbjct: 3108239 ggaaacagtttggagttcctctagtagcttttcagctgaaccaagaaaaacttgtgcgaa 3108180

                                                                           
Query: 62      tgcttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagt 121
               |||||||||||||||| || ||||||||||| ||||||||  | |||||||| |||||||
Sbjct: 3108179 tgcttggtaacatccaagcgatgcttcttgttggctggcgactatgcaagctttatgagt 3108120

                                              
Query: 122     caggcaaaatgacaccaggccatgctagttt 152
               |||| |||||||||||||| |||||||||||
Sbjct: 3108119 cagggaaaatgacaccagggcatgctagttt 3108089



 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                           
Query: 251     aggcgttctgtgatctggagccgatttactcatacgagggcacctatgacatcaacagcc 310
               |||| |||||||| |||||||| || ||||||||||| ||||| || |||||||||||||
Sbjct: 3107798 aggcattctgtgacctggagcctatatactcatacgaaggcacatacgacatcaacagcc 3107739

                                                                           
Query: 311     ttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcagtagcaaaat 370
               | ||||| || |||||||| ||||||||||| ||||||||||| || ||| |||||||| 
Sbjct: 3107738 tggtgactggtagagaaataactgggatcgcaagcttcaaacctgccgcattagcaaaag 3107679

                    
Query: 371     ctcgg 375
               |||||
Sbjct: 3107678 ctcgg 3107674



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                           
Query: 184     gaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttcta 243
               ||||| |||||||| ||||||||  | ||||| || ||||||||||||||||||||||||
Sbjct: 3107947 gaggtggtttctctcggtcgagaattgttgggtggaaatggaattttggctgattttcta 3107888

                         
Query: 244     gtagcaaagg 253
               || |||||||
Sbjct: 3107887 gttgcaaagg 3107878
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>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0041E11
          Length = 146335

 Score =  141 bits (71), Expect = 3e-30
 Identities = 131/151 (86%)
 Strand = Plus / Minus

                                                                         
Query: 2     ggaagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcgga 61
             |||| |||||||||| ||| || | ||| |||||| | ||||||||||| ||||| || |
Sbjct: 52027 ggaaacagtttggagttcctctagtagcttttcagctgaaccaagaaaaacttgtgcgaa 51968

                                                                         
Query: 62    tgcttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagt 121
             |||||||||||||||| || ||||||||||| ||||||||  | |||||||| |||||||
Sbjct: 51967 tgcttggtaacatccaagcgatgcttcttgttggctggcgactatgcaagctttatgagt 51908

                                            
Query: 122   caggcaaaatgacaccaggccatgctagttt 152
             |||| |||||||||||||| |||||||||||
Sbjct: 51907 cagggaaaatgacaccagggcatgctagttt 51877



 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                         
Query: 251   aggcgttctgtgatctggagccgatttactcatacgagggcacctatgacatcaacagcc 310
             |||| |||||||| |||||||| || ||||||||||| ||||| || |||||||||||||
Sbjct: 51586 aggcattctgtgacctggagcctatatactcatacgaaggcacatacgacatcaacagcc 51527

                                                                         
Query: 311   ttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcagtagcaaaat 370
             | ||||| || |||||||| ||||||||||| ||||||||||| || ||| |||||||| 
Sbjct: 51526 tggtgactggtagagaaataactgggatcgcaagcttcaaacctgccgcattagcaaaag 51467

                  
Query: 371   ctcgg 375
             |||||
Sbjct: 51466 ctcgg 51462



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 184   gaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttcta 243
             ||||| |||||||| ||||||||  | ||||| || ||||||||||||||||||||||||
Sbjct: 51735 gaggtggtttctctcggtcgagaattgttgggtggaaatggaattttggctgattttcta 51676

                       
Query: 244   gtagcaaagg 253
             || |||||||
Sbjct: 51675 gttgcaaagg 51666
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>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score =  141 bits (71), Expect = 3e-30
 Identities = 131/151 (86%)
 Strand = Plus / Minus

                                                                         
Query: 2     ggaagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcgga 61
             |||| |||||||||| ||| || | ||| |||||| | ||||||||||| ||||| || |
Sbjct: 76279 ggaaacagtttggagttcctctagtagcttttcagctgaaccaagaaaaacttgtgcgaa 76220

                                                                         
Query: 62    tgcttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagt 121
             |||||||||||||||| || ||||||||||| ||||||||  | |||||||| |||||||
Sbjct: 76219 tgcttggtaacatccaagcgatgcttcttgttggctggcgactatgcaagctttatgagt 76160

                                            
Query: 122   caggcaaaatgacaccaggccatgctagttt 152
             |||| |||||||||||||| |||||||||||
Sbjct: 76159 cagggaaaatgacaccagggcatgctagttt 76129



 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                         
Query: 251   aggcgttctgtgatctggagccgatttactcatacgagggcacctatgacatcaacagcc 310
             |||| |||||||| |||||||| || ||||||||||| ||||| || |||||||||||||
Sbjct: 75838 aggcattctgtgacctggagcctatatactcatacgaaggcacatacgacatcaacagcc 75779

                                                                         
Query: 311   ttgtgaccggaagagaaatcactgggatcgcgagcttcaaacccgctgcagtagcaaaat 370
             | ||||| || |||||||| ||||||||||| ||||||||||| || ||| |||||||| 
Sbjct: 75778 tggtgactggtagagaaataactgggatcgcaagcttcaaacctgccgcattagcaaaag 75719

                  
Query: 371   ctcgg 375
             |||||
Sbjct: 75718 ctcgg 75714



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 184   gaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttcta 243
             ||||| |||||||| ||||||||  | ||||| || ||||||||||||||||||||||||
Sbjct: 75987 gaggtggtttctctcggtcgagaattgttgggtggaaatggaattttggctgattttcta 75928

                       
Query: 244   gtagcaaagg 253
             || |||||||
Sbjct: 75927 gttgcaaagg 75918
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>gb|AY110040.1| Zea mays CL716_1 mRNA sequence
          Length = 1802

 Score =  135 bits (68), Expect = 2e-28
 Identities = 278/348 (79%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggaagcagtttggagctcccctggcagcctttcagatcaaccaagaaaagcttgttcgga 61
            |||||||||| ||||  || ||||| || |||||| | |||||||| ||||| |  ||||
Sbjct: 1038 ggaagcagttcggagtccctctggcggcgtttcagctgaaccaagagaagctcgcccgga 1097

                                                                        
Query: 62   tgcttggtaacatccaggccatgcttcttgtcggctggcgcttgtgcaagctctatgagt 121
            |||| |||||| ||||| | ||| | || |||||||||||  | ||||||||||| ||||
Sbjct: 1098 tgctcggtaacgtccagtcgatggtcctcgtcggctggcgtctctgcaagctctacgagt 1157

                                                                        
Query: 122  caggcaaaatgacaccaggccatgctagtttgggcaaggcatggacgtccagcaagtcaa 181
            | || |||||||| || ||||| |||||  | || ||||| ||||  ||||| | | |  
Sbjct: 1158 cggggaaaatgacgccgggccacgctagcctagggaaggcttggaactccaggacggccc 1217

                                                                        
Query: 182  gggaggtagtttctctgggtcgagagctattgggcggcaatggaattttggctgattttc 241
            | ||||| || || || || ||||||||  |||| || || || |||||||| || || |
Sbjct: 1218 gcgaggtggtctcccttggccgagagctgctgggtgggaacgggattttggccgacttcc 1277

                                                                        
Query: 242  tagtagcaaaggcgttctgtgatctggagccgatttactcatacgagggcacctatgaca 301
            | ||||| ||||||||||| || |||||||| || ||||| ||||||||||| || ||||
Sbjct: 1278 ttgtagccaaggcgttctgcgacctggagcccatctactcgtacgagggcacgtacgaca 1337

                                                            
Query: 302  tcaacagccttgtgaccggaagagaaatcactgggatcgcgagcttca 349
            |||||||||| |||||||| || ||  |||| ||||||||||||||||
Sbjct: 1338 tcaacagcctggtgaccggcagggaggtcaccgggatcgcgagcttca 1385
to top
>gb|AY600434.1| Tropaeolum majus putative short-chain acyl-CoA oxidase mRNA, complete
            cds
          Length = 1553

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 220  aatggaattttggctgattttctagtagcaaaggcgttctgtgatctggagccgatttac 279
            |||||||||||  ||||||||||||| || ||||| || |||||| ||||||| || || 
Sbjct: 1218 aatggaattttatctgattttctagttgccaaggcattttgtgatttggagcccatctat 1277

                          
Query: 280  tcatacgagggcac 293
             ||||||| |||||
Sbjct: 1278 acatacgaaggcac 1291



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 2    ggaagcagtttggagctcccctggcagcctttcagatcaaccaa 45
            |||| ||||||||||| || || ||||| || ||||||||||||
Sbjct: 1000 ggaaacagtttggagcaccgctagcagctttccagatcaaccaa 1043
to top
>ref|NM_115043.2| Arabidopsis thaliana ACX4 (ACYL-COA OXIDASE 4); oxidoreductase
            AT3G51840 (ACX4) mRNA, complete cds
          Length = 1759

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 220  aatggaattttggctgattttctagtagcaaaggcgttctgtga 263
            ||||||||| | || |||||||| ||||||||||| ||||||||
Sbjct: 1311 aatggaattctagcagattttctggtagcaaaggctttctgtga 1354
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>gb|AY125536.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complete cds
          Length = 1311

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 220  aatggaattttggctgattttctagtagcaaaggcgttctgtga 263
            ||||||||| | || |||||||| ||||||||||| ||||||||
Sbjct: 1156 aatggaattctagcagattttctggtagcaaaggctttctgtga 1199
to top
>gb|AY094441.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complete cds
          Length = 1718

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 220  aatggaattttggctgattttctagtagcaaaggcgttctgtga 263
            ||||||||| | || |||||||| ||||||||||| ||||||||
Sbjct: 1311 aatggaattctagcagattttctggtagcaaaggctttctgtga 1354
to top
>dbj|AK222131.1| Arabidopsis thaliana mRNA for Short-chain acyl CoA oxidase,
           complete cds, clone: RAFL22-95-I12
          Length = 853

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 220 aatggaattttggctgattttctagtagcaaaggcgttctgtga 263
           ||||||||| | || |||||||| ||||||||||| ||||||||
Sbjct: 464 aatggaattctagcagattttctggtagcaaaggctttctgtga 507
to top
>gb|AY087793.1| Arabidopsis thaliana clone 3844 mRNA, complete sequence
          Length = 1626

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 220  aatggaattttggctgattttctagtagcaaaggcgttctgtga 263
            ||||||||| | || |||||||| ||||||||||| ||||||||
Sbjct: 1214 aatggaattctagcagattttctggtagcaaaggctttctgtga 1257
to top
>dbj|AB017643.1| Arabidopsis thaliana mRNA for Short-chain acyl CoA oxidase, complete
            cds
          Length = 1593

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 220  aatggaattttggctgattttctagtagcaaaggcgttctgtga 263
            ||||||||| | || |||||||| ||||||||||| ||||||||
Sbjct: 1195 aatggaattctagcagattttctggtagcaaaggctttctgtga 1238
to top
>gb|U72505.1|ATU72505 Arabidopsis thaliana putative acyl-coA dehydrogenase G6p (AtG6) mRNA,
            complete cds
          Length = 1579

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 220  aatggaattttggctgattttctagtagcaaaggcgttctgtga 263
            ||||||||| | || |||||||| ||||||||||| ||||||||
Sbjct: 1181 aatggaattctagcagattttctggtagcaaaggctttctgtga 1224
to top
>gb|AC091152.18| Homo sapiens chromosome 17, clone RP11-1072C15, complete sequence
          Length = 181835

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 357    tgcagtagcaaaatctcggct 377
              |||||||||||||||||||||
Sbjct: 138516 tgcagtagcaaaatctcggct 138496
to top
>gb|AC040970.7| Homo sapiens chromosome 8, clone RP11-809O17, complete sequence
          Length = 183894

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 357   tgcagtagcaaaatctcggct 377
             |||||||||||||||||||||
Sbjct: 58813 tgcagtagcaaaatctcggct 58833
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>gb|AC010422.7| Homo sapiens chromosome 19 clone CTD-2192J16, complete sequence
          Length = 203790

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 357   tgcagtagcaaaatctcggct 377
             |||||||||||||||||||||
Sbjct: 91661 tgcagtagcaaaatctcggct 91681
to top
>gb|AC036214.9| Homo sapiens chromosome 8, clone RP11-26J3, complete sequence
          Length = 160545

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 357   tgcagtagcaaaatctcggct 377
             |||||||||||||||||||||
Sbjct: 49070 tgcagtagcaaaatctcggct 49090
to top
>gb|AC018952.9| Homo sapiens chromosome 8, clone RP11-498N9, complete sequence
          Length = 180535

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 357   tgcagtagcaaaatctcggct 377
             |||||||||||||||||||||
Sbjct: 83823 tgcagtagcaaaatctcggct 83803
to top
>gb|AC068056.7| Homo sapiens BAC clone RP11-84M3 from 2, complete sequence
          Length = 193017

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 357    tgcagtagcaaaatctcggct 377
              |||||||||||||||||||||
Sbjct: 103619 tgcagtagcaaaatctcggct 103599
to top
>gb|AC097264.4| Pan troglodytes BAC RP43-175I2 (Roswell Park Cancer Institute Male
              Chimpanzee BAC Library) complete sequence
          Length = 173720

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 357    tgcagtagcaaaatctcggct 377
              |||||||||||||||||||||
Sbjct: 135510 tgcagtagcaaaatctcggct 135530
to top
>gb|AC150499.3| Bos taurus  BAC CH240-105M18 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 205738

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   atggagtcacatctcacgat 569
             ||||||||||||||||||||
Sbjct: 84197 atggagtcacatctcacgat 84178
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>emb|Z81042.1|CEC27H6 Caenorhabditis elegans Cosmid C27H6, complete sequence
          Length = 24775

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   ttgggcggcaatggaatttt 230
             ||||||||||||||||||||
Sbjct: 12991 ttgggcggcaatggaatttt 13010
to top
>gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome 13, complete sequence
          Length = 153028

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   atgacatcaacagccttgtg 315
             ||||||||||||||||||||
Sbjct: 93981 atgacatcaacagccttgtg 94000
to top
>gb|AC099849.4| Homo sapiens chromosome 18, clone RP11-863N1, complete sequence
          Length = 200606

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    gtgcaatggaatgatcaaat 486
              ||||||||||||||||||||
Sbjct: 137899 gtgcaatggaatgatcaaat 137918
to top
>gb|AY170465.1| Leishmania mexicana mexicana alpha adaptin gene, complete cds
          Length = 5000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   aagcagtttggagctcccct 23
           ||||||||||||||||||||
Sbjct: 272 aagcagtttggagctcccct 253
to top
>ref|XM_793364.1| PREDICTED: Strongylocentrotus purpuratus similar to Peroxisomal
           membrane protein 4 (24 kDa peroxisomal intrinsic
           membrane protein) (LOC593909), mRNA
          Length = 612

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 535 gtaatggtgcagcatatggagtca 558
           |||||||||||| |||||||||||
Sbjct: 77  gtaatggtgcagtatatggagtca 100
to top
>emb|AL356742.12| Human DNA sequence from clone RP11-216C10 on chromosome 20 Contains the
             3' end of a novel gene, complete sequence
          Length = 75588

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tgcaagctctatgagtcagg 125
             ||||||||||||||||||||
Sbjct: 51168 tgcaagctctatgagtcagg 51187
to top
>ref|XM_794083.1| PREDICTED: Strongylocentrotus purpuratus similar to Peroxisomal
           membrane protein 4 (24 kDa peroxisomal intrinsic
           membrane protein) (LOC594649), mRNA
          Length = 612

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 535 gtaatggtgcagcatatggagtca 558
           |||||||||||| |||||||||||
Sbjct: 77  gtaatggtgcagtatatggagtca 100
to top
>emb|CR857871.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0226 (from clone DKFZp459M0226)
          Length = 4240

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  gattttctagtagcaaaggc 254
            ||||||||||||||||||||
Sbjct: 2863 gattttctagtagcaaaggc 2882
to top
>gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, complete sequence
          Length = 166125

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 471   aatggaatgatcaaatgtaatttg 494
             ||||||||||| ||||||||||||
Sbjct: 78491 aatggaatgataaaatgtaatttg 78514
to top
>gb|AC006546.9| Homo sapiens chromosome 18 clone p1-1029 map 18q11, complete sequence
          Length = 79128

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   gtgcaatggaatgatcaaat 486
             ||||||||||||||||||||
Sbjct: 66441 gtgcaatggaatgatcaaat 66460
to top
>gb|AC006545.3| Homo sapiens chromosome 18 clone p1-1028 map 18q11, complete sequence
          Length = 78735

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   gtgcaatggaatgatcaaat 486
             ||||||||||||||||||||
Sbjct: 52191 gtgcaatggaatgatcaaat 52210


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,731,362
Number of Sequences: 3902068
Number of extensions: 4731362
Number of successful extensions: 79218
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79098
Number of HSP's gapped (non-prelim): 117
length of query: 580
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 557
effective length of database: 17,143,297,704
effective search space: 9548816821128
effective search space used: 9548816821128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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