>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence
          Length = 77136

 Score =  900 bits (454), Expect = 0.0
 Identities = 461/462 (99%), Gaps = 1/462 (0%)
 Strand = Plus / Plus

                                                                         
Query: 2     ccgaccttttgacagttgcaatcccagttttcacattaccatcctttcccacctcttttt 61
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58375 ccgaccttttgacagttgcaatcccagttttcacattaccatcctttcccacctcttttt 58434

                                                                         
Query: 62    gcttgtggtatttccagagtctgtagctatttacttatatgtcgtgggctaccagagggc 121
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58435 gcttgtggtatttccagagtctgtagctatttacttatatgtcgtgggctaccagagggc 58494

                                                                         
Query: 122   tccctagaggctgcaaattttgtcgctgaggagaagcaagggaacggacggagggtgctc 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58495 tccctagaggctgcaaattttgtcgctgaggagaagcaagggaacggacggagggtgctc 58554

                                                                         
Query: 182   ccagtttctcctgagcctatatatgcgtgtattaactgaaggccgtggaaggcaaaactc 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58555 ccagtttctcctgagcctatatatgcgtgtattaactgaaggccgtggaaggcaaaactc 58614

                                                                         
Query: 242   ggtagggagctctctgagattttggactgtaaggtgtaacccagcgttgtacagggtttc 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58615 ggtagggagctctctgagattttggactgtaaggtgtaacccagcgttgtacagggtttc 58674

                                                                         
Query: 302   ctagtaagaatgcatgacggggacagccgaaactgtattcgtgctgttgtatgaaaggca 361
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58675 ctagtaagaatgcatgacggggacagccgaaactgtattcgtgctgttgtatgaaaggca 58734

                                                                         
Query: 362   ggttgtgccccgctgcgtcttttggaactgttttgatgtttatttctggtgcgtgtgccc 421
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 58735 ggttgtgccccgctgcgtcttttggaactgttttgatgtttatttctggtgcgtgtg-cc 58793

                                                       
Query: 422   gtggtgccttttgggtgtcggaatgaagccctgtgcgttgcc 463
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58794 gtggtgccttttgggtgtcggaatgaagccctgtgcgttgcc 58835

>emb|BX682545.5| Mouse DNA sequence from clone RP23-311B24 on chromosome 4, complete
              sequence
          Length = 217751

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 88     ctatttacttatatgtcgtggg 109
              ||||||||||||||||||||||
Sbjct: 172752 ctatttacttatatgtcgtggg 172773

>gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosome 15, complete sequence
          Length = 216481

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 381    ttttggaactgttttgatgtttat 404
              ||||||| ||||||||||||||||
Sbjct: 155286 ttttggagctgttttgatgtttat 155263

>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence
          Length = 182190

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   taccagagggctccctagag 130
             ||||||||||||||||||||
Sbjct: 58778 taccagagggctccctagag 58759

>gb|AY774547.1| Synthetic construct Francisella tularensis clone FLH152910.01X
           NT02FT1785 gene, complete cds
          Length = 1470

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gtatttccagagtctgtagc 88
           ||||||||||||||||||||
Sbjct: 328 gtatttccagagtctgtagc 347

>gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, complete sequence
          Length = 218875

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 381  ttttggaactgttttgatgtttat 404
            ||||||| ||||||||||||||||
Sbjct: 1462 ttttggagctgttttgatgtttat 1439

>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence
          Length = 230349

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ctttcccacctctttttgct 64
             ||||||||||||||||||||
Sbjct: 93238 ctttcccacctctttttgct 93257

>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence
          Length = 154447

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     ctttcccacctctttttgct 64
              ||||||||||||||||||||
Sbjct: 136516 ctttcccacctctttttgct 136535

>emb|BX957322.7| Zebrafish DNA sequence from clone CH211-179J10 in linkage group 10,
             complete sequence
          Length = 138899

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     ttttgacagttgcaatcccagttt 31
             |||||||| |||||||||||||||
Sbjct: 38723 ttttgacatttgcaatcccagttt 38700

>ref|XM_660717.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.50327)
           partial mRNA
          Length = 303

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tcttttggaactgttttgat 398
           ||||||||||||||||||||
Sbjct: 221 tcttttggaactgttttgat 202

>gb|AC144823.2| Danio rerio clone CH211-150P19, complete sequence
          Length = 159419

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     ttttgacagttgcaatcccagttt 31
             |||||||| |||||||||||||||
Sbjct: 20407 ttttgacatttgcaatcccagttt 20384

>emb|Z95114.19|HS212A2 Human DNA sequence from clone CTA-212A2 on chromosome 22q12,
           complete sequence
          Length = 212753

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  tttgcttgtggtatttccag 78
           ||||||||||||||||||||
Sbjct: 934 tttgcttgtggtatttccag 953

>emb|AL591500.6| Human DNA sequence from clone RP11-460O11 on chromosome 6, complete
            sequence
          Length = 60463

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 7    cttttgacagttgcaatcccagttttca 34
            ||||||||||||| ||| ||||||||||
Sbjct: 8295 cttttgacagttgaaatgccagttttca 8322

>ref|XM_792835.1| PREDICTED: Strongylocentrotus purpuratus similar to coagulation
           factor V precursor (LOC593356), mRNA
          Length = 930

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 266 gactgtaaggtgtaacccagcgtt 289
           ||||||||| ||||||||||||||
Sbjct: 742 gactgtaagctgtaacccagcgtt 719

>gb|AC138593.14| Mus musculus chromosome 8, clone RP24-280K15, complete sequence
          Length = 169176

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    gtacagggtttcctagtaag 309
              ||||||||||||||||||||
Sbjct: 159633 gtacagggtttcctagtaag 159652

>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence
          Length = 191684

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tttgcttgtggtatttccag 78
              ||||||||||||||||||||
Sbjct: 166794 tttgcttgtggtatttccag 166775

>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 217249

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   tttcctagtaagaatgcatg 317
             ||||||||||||||||||||
Sbjct: 88024 tttcctagtaagaatgcatg 88005

>emb|BX572641.10| Zebrafish DNA sequence from clone CH211-213N22 in linkage group 12,
              complete sequence
          Length = 183309

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    actgttttgatgtttatttc 407
              ||||||||||||||||||||
Sbjct: 166618 actgttttgatgtttatttc 166637

>gb|AC154881.6| Mus musculus chromosome 15, clone RP24-259H19, complete sequence
          Length = 180231

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    gtcttttggaactgttttga 397
              ||||||||||||||||||||
Sbjct: 103629 gtcttttggaactgttttga 103648

>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence
          Length = 160367

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    ctttcccacctctttttgct 64
             ||||||||||||||||||||
Sbjct: 68816 ctttcccacctctttttgct 68797

>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence
          Length = 174768

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    ctttcccacctctttttgct 64
             ||||||||||||||||||||
Sbjct: 65989 ctttcccacctctttttgct 65970

>gb|AF222021.1|AF222021 Secale cereale E3900 repeat region and gag pseudogene, complete
            sequence
          Length = 3984

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   tcccacctctttttgcttgt 67
            ||||||||||||||||||||
Sbjct: 1502 tcccacctctttttgcttgt 1483

>gb|AC007052.4|AC007052 Homo sapiens chromosome 18, clone hRPK.411_H_24, complete sequence
          Length = 179726

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     ctctttttgcttgtggtatt 73
              ||||||||||||||||||||
Sbjct: 126666 ctctttttgcttgtggtatt 126685

>gb|AC099713.5| Mus musculus chromosome 15, clone RP23-447B6, complete sequence
          Length = 199130

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    agggagctctctgagatttt 264
              ||||||||||||||||||||
Sbjct: 165331 agggagctctctgagatttt 165350

>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      gtatttccagagtctgtagc 88
               ||||||||||||||||||||
Sbjct: 1714478 gtatttccagagtctgtagc 1714459

>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    gtatttccagagtctgtagc 88
             ||||||||||||||||||||
Sbjct: 80353 gtatttccagagtctgtagc 80372

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    aaggccgtggaaggcaaaac 239
              ||||||||||||||||||||
Sbjct: 379176 aaggccgtggaaggcaaaac 379195

>gb|AY871967.1| Synthetic construct hypothetical protein (FTT0077) gene, complete
           cds
          Length = 1575

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gtatttccagagtctgtagc 88
           ||||||||||||||||||||
Sbjct: 406 gtatttccagagtctgtagc 425

>gb|AC168051.3| Mus musculus BAC clone RP23-169M5 from chromosome 8, complete sequence
          Length = 222981

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    gtacagggtttcctagtaag 309
              ||||||||||||||||||||
Sbjct: 157390 gtacagggtttcctagtaag 157371


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,912,340
Number of Sequences: 3902068
Number of extensions: 3912340
Number of successful extensions: 70847
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70765
Number of HSP's gapped (non-prelim): 81
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)