Clone Name | basd3n11 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ278817.1|HVU278817 Hordeum vulgare partial mRNA for putative cysteine protease (pCYSPROT gene) Length = 412 Score = 254 bits (128), Expect = 8e-65 Identities = 128/128 (100%) Strand = Plus / Plus Query: 45 catcaaccagattgtcactggcgagatggttacattatccgagcaggagcttgtggagtg 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 catcaaccagattgtcactggcgagatggttacattatccgagcaggagcttgtggagtg 60 Query: 105 tgacatcaatgggcagagcagtggctgcaatgggggtcttatggatgatgcctttgagtt 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tgacatcaatgggcagagcagtggctgcaatgggggtcttatggatgatgcctttgagtt 120 Query: 165 catcataa 172 |||||||| Sbjct: 121 catcataa 128
>gb|AF134153.1|AF134153 Hordeum vulgare cysteine protease mRNA, partial cds Length = 490 Score = 113 bits (57), Expect = 2e-22 Identities = 141/169 (83%) Strand = Plus / Plus Query: 2 gcggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtca 61 |||||||||||||||| || |||||||| ||||||||||||||||||||||| |||| | Sbjct: 1 gcggaagttgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgtta 60 Query: 62 ctggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcaga 121 |||| |||||| | ||||| || || || || ||||| || || | |||||| |||| Sbjct: 61 ctggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacaga 120 Query: 122 gcagtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 121 acagtggctgcaacggtgggctcatggatgatgcctttgacttcatcat 169
>ref|XM_474291.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 107 bits (54), Expect = 1e-20 Identities = 141/170 (82%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtc 60 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| Sbjct: 484 tgcggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgtt 543 Query: 61 actggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcag 120 ||||| |||||| | ||||| || || || || ||||| || || | |||||| ||| Sbjct: 544 actggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacag 603 Query: 121 agcagtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 | |||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 604 aacagtggctgcaacggtgggctcatggatgatgcctttgacttcatcat 653
>dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E09, full insert sequence Length = 1766 Score = 107 bits (54), Expect = 1e-20 Identities = 141/170 (82%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtc 60 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| Sbjct: 588 tgcggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgtt 647 Query: 61 actggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcag 120 ||||| |||||| | ||||| || || || || ||||| || || | |||||| ||| Sbjct: 648 actggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacag 707 Query: 121 agcagtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 | |||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 708 aacagtggctgcaacggtgggctcatggatgatgcctttgacttcatcat 757
>dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I21, full insert sequence Length = 1742 Score = 107 bits (54), Expect = 1e-20 Identities = 141/170 (82%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtc 60 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| Sbjct: 564 tgcggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgtt 623 Query: 61 actggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcag 120 ||||| |||||| | ||||| || || || || ||||| || || | |||||| ||| Sbjct: 624 actggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacag 683 Query: 121 agcagtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 | |||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 684 aacagtggctgcaacggtgggctcatggatgatgcctttgacttcatcat 733
>dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D09, full insert sequence Length = 1753 Score = 107 bits (54), Expect = 1e-20 Identities = 141/170 (82%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtc 60 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| Sbjct: 589 tgcggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgtt 648 Query: 61 actggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcag 120 ||||| |||||| | ||||| || || || || ||||| || || | |||||| ||| Sbjct: 649 actggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacag 708 Query: 121 agcagtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 | |||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 709 aacagtggctgcaacggtgggctcatggatgatgcctttgacttcatcat 758
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 101 bits (51), Expect = 7e-19 Identities = 138/167 (82%) Strand = Plus / Minus Query: 4 ggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtcact 63 ||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| ||| Sbjct: 120203 ggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgttact 120144 Query: 64 ggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcagagc 123 || |||||| | ||||| || || || || ||||| || || | |||||| |||| | Sbjct: 120143 ggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacagaac 120084 Query: 124 agtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 ||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 120083 agtggctgcaacggtgggctcatggatgatgcctttgacttcatcat 120037
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 101 bits (51), Expect = 7e-19 Identities = 138/167 (82%) Strand = Plus / Minus Query: 4 ggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtcact 63 ||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| ||| Sbjct: 34208821 ggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgttact 34208762 Query: 64 ggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcagagc 123 || |||||| | ||||| || || || || ||||| || || | |||||| |||| | Sbjct: 34208761 ggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacagaac 34208702 Query: 124 agtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 ||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 34208701 agtggctgcaacggtgggctcatggatgatgcctttgacttcatcat 34208655 Score = 52.0 bits (26), Expect = 6e-04 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Minus Query: 4 ggaagttgctgggctttttccgcagtcagca-cagtagaaagcatcaaccagattgtcac 62 ||||||||||||||||| || ||| | |||| | |||||| |||||||||||||||| || Sbjct: 33159330 ggaagttgctgggctttctcagcaat-agcagctgtagaaggcatcaaccagattgttac 33159272 Query: 63 tggcga 68 |||||| Sbjct: 33159271 tggcga 33159266
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 101 bits (51), Expect = 7e-19 Identities = 138/167 (82%) Strand = Plus / Minus Query: 4 ggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtcact 63 ||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| ||| Sbjct: 59521 ggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgttact 59462 Query: 64 ggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcagagc 123 || |||||| | ||||| || || || || ||||| || || | |||||| |||| | Sbjct: 59461 ggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacagaac 59402 Query: 124 agtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 ||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 59401 agtggctgcaacggtgggctcatggatgatgcctttgacttcatcat 59355
>dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) mRNA for oryzain beta, complete cds Length = 1675 Score = 99.6 bits (50), Expect = 3e-18 Identities = 140/170 (82%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtc 60 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| Sbjct: 500 tgcggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgtt 559 Query: 61 actggcgagatggttacattatccgagcaggagcttgtggagtgtgacatcaatgggcag 120 ||||| |||||| | ||||| || || || || ||||| || || | |||||| ||| Sbjct: 560 actggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacag 619 Query: 121 agcagtggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 | |||||||||||| || || || |||| |||||||||||| |||||||| Sbjct: 620 aacagtggctgcaacggtgggctcatggctgatgcctttgacttcatcat 669
>dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H07, full insert sequence Length = 754 Score = 79.8 bits (40), Expect = 2e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtc 60 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| Sbjct: 588 tgcggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgtt 647 Query: 61 actggcgagatg 72 ||||| |||||| Sbjct: 648 actggtgagatg 659
>gb|AY106278.1| Zea mays PCO137999 mRNA sequence Length = 1382 Score = 71.9 bits (36), Expect = 6e-10 Identities = 87/104 (83%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagcacagtagaaagcatcaaccagattgtc 60 |||||||||||||||||||| || ||||| ||| |||| |||||| | |||||||| ||| Sbjct: 251 tgcggaagttgctgggctttctctgcagtaagctcagtggaaagcgttaaccagatcgtc 310 Query: 61 actggcgagatggttacattatccgagcaggagcttgtggagtg 104 || || |||||||| ||| | || || |||||||| || ||||| Sbjct: 311 accggtgagatggtgacactgtctgaacaggagctcgtagagtg 354
>dbj|AK121500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A11, full insert sequence Length = 752 Score = 58.0 bits (29), Expect = 9e-06 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagca-cagtagaaagcatcaaccagattgt 59 |||||||||||||||||||| || ||| | |||| | |||||| |||||||||||||||| Sbjct: 513 tgcggaagttgctgggctttctcagcaat-agcagctgtagaaggcatcaaccagattgt 571 Query: 60 cactggcga 68 |||||||| Sbjct: 572 tactggcga 580
>dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H09, full insert sequence Length = 1753 Score = 58.0 bits (29), Expect = 9e-06 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagca-cagtagaaagcatcaaccagattgt 59 |||||||||||||||||||| || ||| | |||| | |||||| |||||||||||||||| Sbjct: 513 tgcggaagttgctgggctttctcagcaat-agcagctgtagaaggcatcaaccagattgt 571 Query: 60 cactggcga 68 |||||||| Sbjct: 572 tactggcga 580
>dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M08, full insert sequence Length = 1774 Score = 58.0 bits (29), Expect = 9e-06 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagca-cagtagaaagcatcaaccagattgt 59 |||||||||||||||||||| || ||| | |||| | |||||| |||||||||||||||| Sbjct: 513 tgcggaagttgctgggctttctcagcaat-agcagctgtagaaggcatcaaccagattgt 571 Query: 60 cactggcga 68 |||||||| Sbjct: 572 tactggcga 580
>emb|Z99954.1|PVZ99954 Phaseolus vulgaris Moldavian encoding cysteine proteinase precursor (clone cp71) Length = 1680 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcataa 172 |||||||| ||||||||||| |||| |||||||||||||||| Sbjct: 575 tgcaatggaggtcttatggactatgcatttgagttcatcataa 617
>ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 52.0 bits (26), Expect = 6e-04 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 4 ggaagttgctgggctttttccgcagtcagca-cagtagaaagcatcaaccagattgtcac 62 ||||||||||||||||| || ||| | |||| | |||||| |||||||||||||||| || Sbjct: 451 ggaagttgctgggctttctcagcaat-agcagctgtagaaggcatcaaccagattgttac 509 Query: 63 tggcga 68 |||||| Sbjct: 510 tggcga 515
>gb|AY103676.1| Zea mays PCO102242 mRNA sequence Length = 1878 Score = 52.0 bits (26), Expect = 6e-04 Identities = 56/66 (84%) Strand = Plus / Plus Query: 44 gcatcaaccagattgtcactggcgagatggttacattatccgagcaggagcttgtggagt 103 |||||||||||||||| |||||||| ||| | | || || |||||||||||||| || | Sbjct: 645 gcatcaaccagattgttactggcgacatgatctccttgtctgagcaggagcttgttgact 704 Query: 104 gtgaca 109 |||||| Sbjct: 705 gtgaca 710
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 52.0 bits (26), Expect = 6e-04 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Minus Query: 4 ggaagttgctgggctttttccgcagtcagca-cagtagaaagcatcaaccagattgtcac 62 ||||||||||||||||| || ||| | |||| | |||||| |||||||||||||||| || Sbjct: 49723 ggaagttgctgggctttctcagcaat-agcagctgtagaaggcatcaaccagattgttac 49665 Query: 63 tggcga 68 |||||| Sbjct: 49664 tggcga 49659
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 52.0 bits (26), Expect = 6e-04 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Minus Query: 4 ggaagttgctgggctttttccgcagtcagca-cagtagaaagcatcaaccagattgtcac 62 ||||||||||||||||| || ||| | |||| | |||||| |||||||||||||||| || Sbjct: 41980 ggaagttgctgggctttctcagcaat-agcagctgtagaaggcatcaaccagattgttac 41922 Query: 63 tggcga 68 |||||| Sbjct: 41921 tggcga 41916
>emb|X82011.2|CACPMRNA Cicer arietinum mRNA for cysteine proteinase Length = 1217 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| |||||||||||| ||||||| || |||||||| Sbjct: 600 tgcaatggtggtcttatggattatgccttcgaattcatcat 640
>emb|X70375.1|CATHIPA C.arietinum mRNA for thiol protease Length = 333 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| |||||||||||| ||||||| || |||||||| Sbjct: 124 tgcaatggtggtcttatggattatgccttcgaattcatcat 164
>emb|X66061.1|PSTHIOL P.sativum mRNA for thiolprotease Length = 1820 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| || |||||||| ||||||||||||||||||| Sbjct: 603 tgcaatggtggacttatggactatgcctttgagttcatcat 643
>dbj|AB109186.1| Helianthus annuus scp1 mRNA for cysteine protease-1, complete cds Length = 1589 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| ||||||||||| |||| |||||||||||||| Sbjct: 641 tgcaatggaggtcttatggactatgcttttgagttcatcat 681
>dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA for oryzain alpha, complete cds Length = 1929 Score = 50.1 bits (25), Expect = 0.002 Identities = 60/69 (86%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgcagtcagca-cagtagaaagcatcaaccagattgt 59 |||||||||||||||||||| || ||| | |||| | |||||| ||||||||||||||| Sbjct: 493 tgcggaagttgctgggctttctcagcaat-agcagctgtagaagacatcaaccagattgt 551 Query: 60 cactggcga 68 |||||||| Sbjct: 552 tactggcga 560
>gb|AF259983.1|AF259983 Ipomoea batatas putative cysteine protease mRNA, complete cds Length = 1751 Score = 48.1 bits (24), Expect = 0.009 Identities = 39/44 (88%) Strand = Plus / Plus Query: 127 ggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 ||||||||||| ||||| ||||| ||||||| ||||||||||| Sbjct: 628 ggctgcaatggtggtctaatggactatgccttcgagttcatcat 671
>dbj|AB098631.1| Daucus carota DcCysP8 mRNA for cysteine protease, complete cds Length = 1884 Score = 48.1 bits (24), Expect = 0.009 Identities = 39/44 (88%) Strand = Plus / Plus Query: 127 ggctgcaatgggggtcttatggatgatgcctttgagttcatcat 170 ||||||||||| ||||| ||||||||||| ||| | |||||||| Sbjct: 720 ggctgcaatggaggtctcatggatgatgcttttcaattcatcat 763
>gb|AF134152.1|AF134152 Hordeum vulgare cysteine protease mRNA, partial cds Length = 439 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 37 gtagaaagcatcaaccagattgtcactggcga 68 |||||| |||||||||||||||| |||||||| Sbjct: 12 gtagaaggcatcaaccagattgttactggcga 43
>dbj|AP006667.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT31L14, TM0366, complete sequence Length = 100936 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatca 169 |||||||| |||||||||||| |||| |||||||| |||| Sbjct: 65336 tgcaatggaggtcttatggattatgcttttgagtttatca 65375
>dbj|AP004984.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44N06, TM0438, complete sequence Length = 107764 Score = 46.1 bits (23), Expect = 0.034 Identities = 26/27 (96%) Strand = Plus / Plus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||||||||| ||||| Sbjct: 5409 cagtggctgcaatgggggtctcatgga 5435
>emb|X87781.1|TFCP8GENE T.foetus CP8 gene Length = 456 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 126 tggctgcaatgggggtcttatggatg 151 |||||||||||| ||||||||||||| Sbjct: 105 tggctgcaatggtggtcttatggatg 130
>emb|X87780.1|TFCP7GENE T.foetus CP7 gene Length = 456 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 126 tggctgcaatgggggtcttatggatg 151 |||||||||||| ||||||||||||| Sbjct: 105 tggctgcaatggaggtcttatggatg 130
>emb|X75749.1|VSCYSPRO V.sativa L. mRNA for cysteine protease Length = 1361 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcat 167 ||||||||||| || ||||| |||||||||||||||| Sbjct: 623 tgcaatggggggctgatggactatgcctttgagttcat 660
>gb|AY973616.1| Manihot esculenta cysteine protease CP1 mRNA, complete cds Length = 1831 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 133 aatgggggtcttatggatgatgcctttgagttcatcat 170 ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 645 aatggaggtctaatggactatgcctttgagttcatcat 682
>gb|AC140201.3| Mus musculus BAC clone RP23-267F15 from chromosome 16, complete sequence Length = 166079 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 caatgggcagagcagtggctg 131 ||||||||||||||||||||| Sbjct: 32178 caatgggcagagcagtggctg 32198
>gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, complete sequence Length = 228367 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 caatgggcagagcagtggctg 131 ||||||||||||||||||||| Sbjct: 91518 caatgggcagagcagtggctg 91538
>gb|AC079817.41| Mus musculus strain C57BL/6J clone rp23-247i11 map 16, complete sequence Length = 197346 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 caatgggcagagcagtggctg 131 ||||||||||||||||||||| Sbjct: 98458 caatgggcagagcagtggctg 98478
>ref|NG_004051.1| Mus musculus immunoglobulin lambda chain complex (Igl) on chromosome 16 Length = 234987 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 caatgggcagagcagtggctg 131 ||||||||||||||||||||| Sbjct: 174209 caatgggcagagcagtggctg 174189
>gb|AC148098.3| Medicago truncatula clone mth2-15b16, complete sequence Length = 97953 Score = 42.1 bits (21), Expect = 0.54 Identities = 36/41 (87%) Strand = Plus / Minus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 72191 tgcaatggtggacttatggattacgccttcgagttcatcat 72151
>gb|AY526905.1| Pelargonium x hortorum cysteine protease-like protein mRNA, partial cds Length = 704 Score = 42.1 bits (21), Expect = 0.54 Identities = 36/41 (87%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| ||||||||||| |||| || ||||||||||| Sbjct: 128 tgcaatggaggtcttatggactatgctttcgagttcatcat 168
>gb|AC150207.2| Medicago truncatula chromosome 2 BAC clone mte1-29a5, complete sequence Length = 124676 Score = 42.1 bits (21), Expect = 0.54 Identities = 36/41 (87%) Strand = Plus / Minus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 83480 tgcaatggtggacttatggattacgccttcgagttcatcat 83440
>gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) mRNA, complete cds Length = 1830 Score = 42.1 bits (21), Expect = 0.54 Identities = 36/41 (87%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| ||||| ||||| |||| |||||||||||||| Sbjct: 693 tgcaatggaggtctgatggactatgcgtttgagttcatcat 733
>dbj|AB020961.1| Zea mays mRNA for cysteine protease component of protease-inhibitor complex, complete cds Length = 1828 Score = 42.1 bits (21), Expect = 0.54 Identities = 36/41 (87%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatcat 170 |||||||| ||||| ||||| |||| |||||||||||||| Sbjct: 692 tgcaatggaggtctgatggactatgcatttgagttcatcat 732
>ref|XM_467463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1101 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggaagttgctgggctttttc 23 |||||||||||||||||||| Sbjct: 493 ggaagttgctgggctttttc 512
>gb|AY504967.1| Iris hollandica putative cysteine protease 2 (CYS2) mRNA, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 142 cttatggatgatgcctttgagttcatca 169 |||||||| |||||||||||||||||| Sbjct: 583 cttatggactatgcctttgagttcatca 610
>emb|Z34895.1|VSCYSPROA V.sativa L. (PROT A) mRNA for cysteine proteinase Length = 1284 Score = 40.1 bits (20), Expect = 2.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 130 tgcaatgggggtcttatggatgatgcctttgagttcatca 169 ||||||||||| || ||||| |||| ||||||||||||| Sbjct: 589 tgcaatggggggctgatggaatatgcgtttgagttcatca 628
>gb|AC147881.2| Xenopus tropicalis clone CH216-115N11, complete sequence Length = 162394 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 gtgacatcaatgggcagagcagtg 127 ||||||||| |||||||||||||| Sbjct: 69554 gtgacatcactgggcagagcagtg 69577
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ggctttttccgcagtcagcacagt 38 |||||||||||| ||||||||||| Sbjct: 1170433 ggctttttccgctgtcagcacagt 1170410
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggaagttgctgggctttttc 23 |||||||||||||||||||| Sbjct: 29687077 ggaagttgctgggctttttc 29687096
>dbj|AP008245.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0013K10 Length = 129118 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 gcaggagcttgtggagtgtgacat 110 ||||||||||||||||| |||||| Sbjct: 41963 gcaggagcttgtggagtatgacat 41940
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggaagttgctgggctttttc 23 |||||||||||||||||||| Sbjct: 56056 ggaagttgctgggctttttc 56075
>dbj|AK104296.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H03, full insert sequence Length = 1251 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggaagttgctgggctttttc 23 |||||||||||||||||||| Sbjct: 493 ggaagttgctgggctttttc 512
>dbj|AK060534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A12, full insert sequence Length = 1251 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggaagttgctgggctttttc 23 |||||||||||||||||||| Sbjct: 493 ggaagttgctgggctttttc 512
>gb|AC119832.9| Mus musculus chromosome 3, clone RP23-471I16, complete sequence Length = 178681 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 gcctttgagttcatcataa 172 ||||||||||||||||||| Sbjct: 18989 gcctttgagttcatcataa 18971
>ref|NM_119701.2| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase AT4G35350 (XCP1) transcript variant AT4G35350.1 mRNA, complete cds Length = 1244 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||| ||||| ||||| Sbjct: 638 cagtggctgcaatggaggtctcatgga 664
>ref|NM_202958.1| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase AT4G35350 (XCP1) transcript variant AT4G35350.2 mRNA, complete cds Length = 1340 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||| ||||| ||||| Sbjct: 638 cagtggctgcaatggaggtctcatgga 664
>gb|AE008516.1| Streptococcus pneumoniae R6 section 132 of 184 of the complete genome Length = 11570 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 126 tggctgcaatgggggtctt 144 ||||||||||||||||||| Sbjct: 7376 tggctgcaatgggggtctt 7394
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 20 tttccgcagtcagcacagtagaa 42 |||||||||||||||| |||||| Sbjct: 1382985 tttccgcagtcagcactgtagaa 1383007 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 20 tttccgcagtcagcacagtagaa 42 |||||||||||||||| |||||| Sbjct: 1382403 tttccgcagtcagcactgtagaa 1382425
>ref|XM_984002.1| PREDICTED: Mus musculus zinc finger protein 292 (Zfp292), mRNA Length = 9984 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 atgatgcctttgagttcat 167 ||||||||||||||||||| Sbjct: 5176 atgatgcctttgagttcat 5194
>ref|XM_909747.2| PREDICTED: Mus musculus zinc finger protein 292, transcript variant 4 (Zfp292), mRNA Length = 10211 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 atgatgcctttgagttcat 167 ||||||||||||||||||| Sbjct: 5404 atgatgcctttgagttcat 5422
>ref|XM_620009.3| PREDICTED: Mus musculus zinc finger protein 292, transcript variant 2 (Zfp292), mRNA Length = 9988 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 atgatgcctttgagttcat 167 ||||||||||||||||||| Sbjct: 5180 atgatgcctttgagttcat 5198
>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence Length = 186217 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 115 gggcagagcagtggctgca 133 ||||||||||||||||||| Sbjct: 93984 gggcagagcagtggctgca 94002
>emb|AJ006391.1|SPAJ6391 Streptococcus pneumoniae rr01 and hk01 genes; two component system 01 Length = 1709 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 tggctgcaatgggggtctt 144 ||||||||||||||||||| Sbjct: 1099 tggctgcaatgggggtctt 1081
>emb|AL683813.10| Human DNA sequence from clone RP11-1114A5 on chromosome X Contains the 5' end of the ARHGEF6 gene for Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6, a ribosomal protein L7 (RPL7) pseudogene, a RAN member RAS oncogene family pseudogene, a novel gene, the RNMX gene for RNA binding motif protein (X chromosome), the 5' end of a novel gene and two CpG islands, complete sequence Length = 148654 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 agcaggagcttgtggagtg 104 ||||||||||||||||||| Sbjct: 11059 agcaggagcttgtggagtg 11041
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 gctttttccgcagtcagcacagt 38 ||||||||||| ||||||||||| Sbjct: 3200447 gctttttccgctgtcagcacagt 3200469
>emb|AL359633.15| Human DNA sequence from clone RP11-795J1 on chromosome 6 Contains the 5' end of the DSCR1L1 gene for Down syndrome critical region gene 1-like 1 (MCIP2 ZAKI-4), three novel genes and a CpG island, complete sequence Length = 199200 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 ctgcaatgggggtcttatg 147 ||||||||||||||||||| Sbjct: 140331 ctgcaatgggggtcttatg 140349
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 1 tgcggaagttgctgggctttttccgca 27 |||| ||||||||||||||| |||||| Sbjct: 1503221 tgcgcaagttgctgggctttctccgca 1503247
>ref|XM_965932.1| PREDICTED: Tribolium castaneum similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A) (LOC659646), mRNA Length = 1818 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 147 ggatgatgcctttgagttc 165 ||||||||||||||||||| Sbjct: 361 ggatgatgcctttgagttc 343
>emb|Z99173.1|NTCYSTPRO Nicotiana tabacum mRNA for cysteine proteinase precursor Length = 1218 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 atgcctttgagttcatcat 170 ||||||||||||||||||| Sbjct: 688 atgcctttgagttcatcat 706
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||| ||||| ||||| Sbjct: 75829 cagtggctgcaatggaggtctcatgga 75855
>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E12 (ESSA project) Length = 86710 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||| ||||| ||||| Sbjct: 27522 cagtggctgcaatggaggtctcatgga 27496
>gb|AC073021.12| Homo sapiens 3 BAC RP11-250B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183155 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 129 ctgcaatgggggtcttatg 147 ||||||||||||||||||| Sbjct: 161495 ctgcaatgggggtcttatg 161477
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 catcaatgggcagagcagt 126 ||||||||||||||||||| Sbjct: 2442015 catcaatgggcagagcagt 2441997
>gb|AC107023.4| Homo sapiens 12 BAC RP11-115F18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150353 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 agagcagtggctgcaatgg 137 ||||||||||||||||||| Sbjct: 87047 agagcagtggctgcaatgg 87065
>gb|AC010387.5| Homo sapiens chromosome 5 clone CTD-2074D8, complete sequence Length = 173414 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 ctgcaatgggggtcttatg 147 ||||||||||||||||||| Sbjct: 103906 ctgcaatgggggtcttatg 103924
>gb|AC069411.21| Homo sapiens 3 BAC RP11-609K13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156733 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 121 agcagtggctgcaatgggg 139 ||||||||||||||||||| Sbjct: 861 agcagtggctgcaatgggg 843
>emb|CR385212.1| Gallus gallus finished cDNA, clone ChEST539g23 Length = 1007 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 114 tgggcagagcagtggctgc 132 ||||||||||||||||||| Sbjct: 42 tgggcagagcagtggctgc 60
>gb|BC008537.1| Mus musculus zinc finger protein 292, mRNA (cDNA clone IMAGE:3493868), partial cds Length = 4339 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 atgatgcctttgagttcat 167 ||||||||||||||||||| Sbjct: 1257 atgatgcctttgagttcat 1275
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 88 caggagcttgtggagtgtgacat 110 |||||||||||||||| |||||| Sbjct: 12038107 caggagcttgtggagtatgacat 12038129
>dbj|AB221608.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01X017A17 Length = 2496 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 atgatgcctttgagttcat 167 ||||||||||||||||||| Sbjct: 1582 atgatgcctttgagttcat 1600
>emb|BX828945.1|CNS0A2LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1195 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||| ||||| ||||| Sbjct: 625 cagtggctgcaatggaggtctcatgga 651
>gb|BT005179.1| Arabidopsis thaliana clone U50467 unknown protein (At4g35350) mRNA, complete cds Length = 1099 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||| ||||| ||||| Sbjct: 591 cagtggctgcaatggaggtctcatgga 617
>gb|AY017413.1| Nicotiana tabacum CPR1-like cysteine proteinase gene, complete cds Length = 1976 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 atgcctttgagttcatcat 170 ||||||||||||||||||| Sbjct: 1288 atgcctttgagttcatcat 1306
>gb|AC091212.17| Homo sapiens 3 BAC CTD-2021J15 (CalTech Clone Library D) complete sequence Length = 79000 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 121 agcagtggctgcaatgggg 139 ||||||||||||||||||| Sbjct: 77796 agcagtggctgcaatgggg 77778
>gb|AC108678.3| Homo sapiens 3 BAC RP11-357G12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 56921 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 121 agcagtggctgcaatgggg 139 ||||||||||||||||||| Sbjct: 107 agcagtggctgcaatgggg 89
>gb|AF191027.1|AF191027 Arabidopsis thaliana papain-type cysteine endopeptidase XCP1 mRNA, complete cds Length = 1214 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||| ||||| ||||| Sbjct: 591 cagtggctgcaatggaggtctcatgga 617
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 126 tggctgcaatgggggtctt 144 ||||||||||||||||||| Sbjct: 1533132 tggctgcaatgggggtctt 1533150
>dbj|AP006626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1042B08 Length = 142032 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 88 caggagcttgtggagtgtgacat 110 |||||||||||||||| |||||| Sbjct: 46955 caggagcttgtggagtatgacat 46977
>emb|BX465850.12| Mouse DNA sequence from clone RP24-349L5 on chromosome 4, complete sequence Length = 59975 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 149 atgatgcctttgagttcat 167 ||||||||||||||||||| Sbjct: 16852 atgatgcctttgagttcat 16834
>dbj|AK117394.1| Arabidopsis thaliana At4g35350 mRNA for putative cysteine proteinase, complete cds, clone: RAFL16-98-B02 Length = 1244 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 123 cagtggctgcaatgggggtcttatgga 149 ||||||||||||||| ||||| ||||| Sbjct: 638 cagtggctgcaatggaggtctcatgga 664
>gb|AF017806.1|AF017806 Mus musculus Zn-15 transcription factor (Zfp-15) mRNA, complete cds Length = 6706 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 atgatgcctttgagttcat 167 ||||||||||||||||||| Sbjct: 3639 atgatgcctttgagttcat 3657
>dbj|AK109136.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-E03, full insert sequence Length = 1410 Score = 38.2 bits (19), Expect = 8.4 Identities = 28/31 (90%) Strand = Plus / Plus Query: 133 aatgggggtcttatggatgatgcctttgagt 163 ||||| ||||| |||||| |||||||||||| Sbjct: 639 aatggtggtctcatggataatgcctttgagt 669
>dbj|AB093243.1| Mus musculus mRNA for mKIAA0530 protein Length = 5808 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 atgatgcctttgagttcat 167 ||||||||||||||||||| Sbjct: 2741 atgatgcctttgagttcat 2759
>emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on chromosome 2, complete sequence Length = 155501 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 agcttgtggagtgtgacatcaat 114 ||||||||||||||||| ||||| Sbjct: 75878 agcttgtggagtgtgacttcaat 75900
>gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complete sequence Length = 190156 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 gcttgtggagtgtgacatc 111 ||||||||||||||||||| Sbjct: 77736 gcttgtggagtgtgacatc 77718 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,335,420 Number of Sequences: 3902068 Number of extensions: 1335420 Number of successful extensions: 95407 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95047 Number of HSP's gapped (non-prelim): 351 length of query: 172 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 150 effective length of database: 17,147,199,772 effective search space: 2572079965800 effective search space used: 2572079965800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)