ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3m12 |
|---|---|
| Clone Library Name | barley_pub |
>YAA1_SCHPO (Q09795) Probable peptidase C22G7.01c (EC 3.4.-.-)| Length = 598 Score = 96.3 bits (238), Expect = 5e-20 Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 1/163 (0%) Frame = +1 Query: 4 LQHEKASGIIITALDEVAWLYNVRGNDVHYSPVVHSYAIVTLHGAFFYVDKRKVTTEVKN 183 ++ +K +++ LDEVAWLYN+RG DV Y+PV +Y++VTL AF YVD+RKVT EV Sbjct: 185 MKEQKIEAFVVSMLDEVAWLYNLRGADVPYNPVFFAYSLVTLDEAFLYVDERKVTPEVSK 244 Query: 184 YMAEIGIDIREYDMVQLDVSLLASGQLKGSAVNGSLLMEKDINVAEHSKIWIDS-NSCCL 360 ++ + I YD V D A N +L ++I I S S C+ Sbjct: 245 HLDGF-VKILPYDRVFSD------------AKNSNL-----------TRIGISSKTSWCI 280 Query: 361 ALYSKLRPDQALMLQSPIALPKAVKNPMELNGLRKAHIRDGTA 489 A + + + + SPI+ K +KN EL G+++ HIRDG A Sbjct: 281 A--TSFGETKVMPILSPISQAKGIKNDAELKGMKECHIRDGCA 321
>XPP1_MOUSE (Q6P1B1) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 87.4 bits (215), Expect = 2e-17 Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 2/169 (1%) Frame = +1 Query: 1 KLQHEKASGIIITALDEVAWLYNVRGNDVHYSPVVHSYAIVTLHGAFFYVDKRKVTTE-V 177 K+ + ++TALDE+AWL+N+RG+DV ++PV SYAIV L ++D +V V Sbjct: 188 KMAERSIAWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIVGLETIMLFIDGDRVDAPGV 247 Query: 178 KNY-MAEIGIDIREYDMVQLDVSLLASGQLKGSAVNGSLLMEKDINVAEHSKIWIDSNSC 354 K + + ++G++ EY + L + S +LK +++ K+W+ + Sbjct: 248 KQHLLLDLGLE-AEYRIQVLPYKSILS-ELKALCA----------DLSPREKVWVSDKAS 295 Query: 355 CLALYSKLRPDQALMLQSPIALPKAVKNPMELNGLRKAHIRDGTACCAI 501 + + + M +PI + KAVKN E +G+R+AHI+D A C + Sbjct: 296 YAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCEL 344
>XPP1_HUMAN (Q9NQW7) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 622 Score = 86.3 bits (212), Expect = 5e-17 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 8/175 (4%) Frame = +1 Query: 1 KLQHEKASGIIITALDEVAWLYNVRGNDVHYSPVVHSYAIVTLHGAFFYVDKRKV-TTEV 177 K+ ++TALDE+AWL+N+RG+DV ++PV SYAI+ L ++D ++ V Sbjct: 187 KMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGDRIDAPSV 246 Query: 178 KNYM-------AEIGIDIREYDMVQLDVSLLASGQLKGSAVNGSLLMEKDINVAEHSKIW 336 K ++ AE I + Y + ++ L + +++ K+W Sbjct: 247 KEHLLLDLGLEAEYRIQVHPYKSILSELKALCA------------------DLSPREKVW 288 Query: 337 IDSNSCCLALYSKLRPDQALMLQSPIALPKAVKNPMELNGLRKAHIRDGTACCAI 501 + + + + + M +PI + KAVKN E G+R+AHI+D A C + Sbjct: 289 VSDKASYAVSETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCEL 343
>XPP1_RAT (O54975) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 84.0 bits (206), Expect = 2e-16 Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 2/169 (1%) Frame = +1 Query: 1 KLQHEKASGIIITALDEVAWLYNVRGNDVHYSPVVHSYAIVTLHGAFFYVDKRKVTTE-V 177 K+ ++TALDE+AWL+N+RG+DV ++PV SYAI+ L ++D ++ V Sbjct: 188 KMAERSIVWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLERIMLFIDGDRIDAPGV 247 Query: 178 KNY-MAEIGIDIREYDMVQLDVSLLASGQLKGSAVNGSLLMEKDINVAEHSKIWIDSNSC 354 K + + ++G++ EY + L + S +LK +++ K+W+ + Sbjct: 248 KQHLLLDLGLE-AEYKIQVLPYKSILS-ELKTLCA----------DLSPREKVWVSDKAS 295 Query: 355 CLALYSKLRPDQALMLQSPIALPKAVKNPMELNGLRKAHIRDGTACCAI 501 + + + M +PI + KAVKN E G+R+AHI+D A C + Sbjct: 296 YAVSEAIPKDHRCCMPYTPICIAKAVKNSAESAGMRRAHIKDAVALCEL 344
>XPP2_PIG (Q95333) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 673 Score = 77.0 bits (188), Expect(2) = 2e-14 Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 7/167 (4%) Frame = +1 Query: 10 HEKASGIIITALDEVAWLYNVRGNDVHYSPVVHSYAIVTLHGAFFYVDKRKVTTEVKNYM 189 HE+ + ++++ALDE AWL+N+R +D+ Y+P +SY ++T + +K + ++E Y+ Sbjct: 230 HERPTAVLLSALDETAWLFNLRSSDIPYNPFFYSYTLLTDSSIRLFANKSRFSSETLQYL 289 Query: 190 -----AEIGIDIREYDMVQLDVSLLASGQLKGSAVNGSLLMEKDINVAEHSKIWIDSNSC 354 + + + + +Y ++ + SG + KIWI + Sbjct: 290 NSSCNSSMCVQLEDYSQIRDSIQAYTSGDV---------------------KIWIGTRYT 328 Query: 355 CLALYSKLRPDQALMLQ--SPIALPKAVKNPMELNGLRKAHIRDGTA 489 LY + P + L+ SP+ + KAVKN E L+ +H+RD A Sbjct: 329 SYGLYEVI-PKEKLVEDDYSPVMITKAVKNSREQALLKASHVRDAVA 374 Score = 20.8 bits (42), Expect(2) = 2e-14 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +2 Query: 482 AQLVVQYLAWLDNQM 526 A V++YLAWL+ + Sbjct: 372 AVAVIRYLAWLEKNV 386
>XPP2_HUMAN (O43895) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 674 Score = 70.1 bits (170), Expect = 4e-12 Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 8/169 (4%) Frame = +1 Query: 7 QHEKA-SGIIITALDEVAWLYNVRGNDVHYSPVVHSYAIVTLHGAFFYVDKRKVTTEVKN 183 +H+K + ++++AL+E AWL+N+R +D+ Y+P +SY ++T + +K + ++E + Sbjct: 229 KHQKVPTAVLLSALEETAWLFNLRASDIPYNPFFYSYTLLTDSSIRLFANKSRFSSETLS 288 Query: 184 YM-----AEIGIDIREYDMVQLDVSLLASGQLKGSAVNGSLLMEKDINVAEHSKIWIDSN 348 Y+ + + I +Y V+ + + G + +IWI ++ Sbjct: 289 YLNSSCTGPMCVQIEDYSQVRDSIQAYSLGDV---------------------RIWIGTS 327 Query: 349 SCCLALYSKLRPDQALMLQ--SPIALPKAVKNPMELNGLRKAHIRDGTA 489 +Y + P + L+ SP+ + KAVKN E L+ +H+RD A Sbjct: 328 YTMYGIYEMI-PKEKLVTDTYSPVMMTKAVKNSKEQALLKASHVRDAVA 375
>XPP_YEAST (Q07825) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9)| Length = 749 Score = 64.7 bits (156), Expect(2) = 3e-11 Identities = 40/157 (25%), Positives = 76/157 (48%) Frame = +1 Query: 31 IITALDEVAWLYNVRGNDVHYSPVVHSYAIVTLHGAFFYVDKRKVTTEVKNYMAEIGIDI 210 I+ ALDE+ WL N+RG+D+ Y+PV SY + + + ++ Y GI++ Sbjct: 327 IVVALDEICWLLNLRGSDIDYNPVFFSYVAINEDETILFTN-NPFNDDISEYFKINGIEV 385 Query: 211 REYDMVQLDVSLLASGQLKGSAVNGSLLMEKDINVAEHSKIWIDSNSCCLALYSKLRPDQ 390 R Y+ + ++ + S + S+ L+ D + + S + A+ K+ Sbjct: 386 RPYEQIWEHLTKITS---QASSAEHEFLI-PDSASWQMVRCLNTSTNANGAIAKKMTAQN 441 Query: 391 ALMLQSPIALPKAVKNPMELNGLRKAHIRDGTACCAI 501 ++ SPI + K++KN +E+ KA ++D A C + Sbjct: 442 FAIIHSPIDVLKSIKNDIEIKNAHKAQVKD--AVCLV 476 Score = 22.3 bits (46), Expect(2) = 3e-11 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +2 Query: 482 AQLVVQYLAWLDNQM 526 A +VQY AWL+ Q+ Sbjct: 472 AVCLVQYFAWLEQQL 486
>KLPA_EMENI (P28739) Kinesin-like protein klpA| Length = 770 Score = 33.1 bits (74), Expect = 0.50 Identities = 26/89 (29%), Positives = 43/89 (48%) Frame = +1 Query: 37 TALDEVAWLYNVRGNDVHYSPVVHSYAIVTLHGAFFYVDKRKVTTEVKNYMAEIGIDIRE 216 T+L+E W Y + GN V V++ + L G +DK+K+ E+++ M I + Sbjct: 543 TSLEEKGWRYTMEGNFVE----VYNENLNDLLGKAEELDKKKL--EIRHDMQRGKTTITD 596 Query: 217 YDMVQLDVSLLASGQLKGSAVNGSLLMEK 303 VQL+ + LK +A N S+ K Sbjct: 597 ATTVQLESPEMVESLLKRAAANRSVAATK 625
>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1821 Score = 31.6 bits (70), Expect = 1.4 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 Query: 54 CLVVQCSGK*RALQPSGSFLCYCNPAWCLLLCG 152 CL C GK R + GS+ C+C P + L G Sbjct: 891 CLRDPCKGKGRCINRVGSYSCFCYPGYTLATSG 923
>RNFD_PSEAE (Q9HYB7) Electron transport complex protein rnfD| Length = 344 Score = 30.0 bits (66), Expect = 4.2 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +1 Query: 64 YNVRGNDVHYSPVVHSYAIVTLHGAFFYV 150 +N G+D H SP+ H ++ T+ GAFF V Sbjct: 243 WNGSGSDSHGSPLFHLFSGATMLGAFFIV 271
>LIG_PHLRA (P20010) Ligninase-3 precursor (EC 1.11.1.14) (Ligninase III)| (Diarylpropane peroxidase) (Lignin peroxidase) Length = 361 Score = 29.6 bits (65), Expect = 5.5 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = +1 Query: 217 YDMVQLDVSLLASGQLKGSAVNGSLLMEKDINVAEHSKIWID 342 +D + + ++ A+GQ G +GS+++ DI H I +D Sbjct: 70 HDAIAISPAMEATGQFGGGGADGSIMIFSDIETKFHPNIGLD 111
>SYI2_PSEFL (Q8L1B1) Isoleucyl-tRNA synthetase 2 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 2) (IleRS 2) (IleRS-R2) Length = 1029 Score = 29.6 bits (65), Expect = 5.5 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = +1 Query: 130 HGAFFYVDKRKVTTEVKNYMAEIGIDIREYDMVQLDVSLLASGQLKGSAVNGSLLMEKDI 309 HG D RK++ +KNY + + ++ + L V+LLAS KG + S +D+ Sbjct: 578 HGVILAKDGRKMSKRLKNYPNPMDL-MQTHGSDALRVALLASPVCKGEDIKFSEESVRDV 636 Query: 310 NVAEHSKIW 336 H W Sbjct: 637 VRRYHLLFW 645
>SYA_NOCFA (Q5YTJ9) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 888 Score = 29.3 bits (64), Expect = 7.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 144 KEGTMQGYNSIRMNHWAVMHVISPNIVQPSNLIK 43 + G QG++ M H A+ V+ PN VQ +L K Sbjct: 564 RRGATQGHSGTHMVHAALRQVLGPNAVQAGSLNK 597
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 29.3 bits (64), Expect = 7.2 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 Query: 54 CLVVQCSGK*RALQPSGSFLCYCNPAWCLLLCG 152 CL C G+ R + GS+ C+C P + L G Sbjct: 883 CLRDPCKGRGRCVNRVGSYSCFCYPGYKLATSG 915
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 29.3 bits (64), Expect = 7.2 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Frame = +1 Query: 121 VTLHGAFFYVDKRKVTTEVKNYMAEIGIDIREYDMVQLDVSLLASGQLKGSAVN-GSLLM 297 V LH + V K TT V++ E+GI + E D++QLD + +S S VN +L+ Sbjct: 472 VMLHSSSVSVGK---TTLVRSTCRELGIHLIEIDLLQLDPHMNSS----NSTVNIVALIR 524 Query: 298 EKDINVAEHS 327 K NV H+ Sbjct: 525 AKIENVLPHT 534
>MURD_CORJK (Q4JW97) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 502 Score = 28.9 bits (63), Expect = 9.3 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 106 HSYAIVTLHGAFFYVDKRKVTTEVKNYMAEIGIDIREYDMVQLDVSLLASGQLKGSAVNG 285 H +V HG ++D K T + AE + Q +V +A GQLKG+AV+G Sbjct: 345 HRGQVVLEHGGVTWIDNSKATNP---HAAEAAL------RGQRNVIWVAGGQLKGAAVDG 395
>LTBP2_RAT (O35806) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1764 Score = 28.9 bits (63), Expect = 9.3 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +3 Query: 54 CLVVQCSGK*RALQPSGSFLCYCNPAWCLLLCG 152 CL C G+ R + GS+ C C P + L G Sbjct: 881 CLRNPCEGRGRCVNSVGSYSCLCYPGYTLATLG 913
>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1813 Score = 28.9 bits (63), Expect = 9.3 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +3 Query: 54 CLVVQCSGK*RALQPSGSFLCYCNPAWCLLLCG 152 C+ C G+ R + GS+ C C P + L+ G Sbjct: 882 CMRNPCEGRGRCVNSVGSYSCLCYPGYTLVTLG 914 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,251,736 Number of Sequences: 219361 Number of extensions: 1587434 Number of successful extensions: 4303 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4296 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
