ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3m18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ222778.1|HVJ222778 Hordeum vulgare mRNA for putative thiol... 670 0.0
2ref|XM_470991.1| Oryza sativa (japonica cultivar-group), predic... 121 2e-24
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
5emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 121 2e-24
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
7dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
8gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, part... 60 7e-06
9dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, co... 54 4e-04
10gb|AY112580.1| Zea mays CL875_1 mRNA sequence 54 4e-04
11gb|AY110841.1| Zea mays CL908_1 mRNA sequence 52 0.002
12ref|NM_189456.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
13gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
14gb|AY335487.1| Oryza sativa (japonica cultivar-group) cysteine p... 50 0.007
15gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01,... 50 0.007
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
18dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
19dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
20dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
21dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
22dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
23dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
24gb|AY104930.1| Zea mays PCO132946 mRNA sequence 48 0.028
25gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, comp... 46 0.11
26gb|DQ489716.1| Rhodococcus erythropolis strain AN12 plasmid pREA... 44 0.43
27ref|NM_192773.1| Oryza sativa (japonica cultivar-group), predic... 42 1.7
28dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
29dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
30gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Canc... 40 6.8
31ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa816... 40 6.8
32ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
33ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
34ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
35ref|NM_190938.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
36ref|NM_192771.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
37ref|XM_476390.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
38gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
39gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.8
40gb|AC093366.9| Mus musculus chromosome 8, clone RP23-60P23, comp... 40 6.8
41gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.8
42ref|XM_420326.1| PREDICTED: Gallus gallus similar to RAB39B, mem... 40 6.8
43ref|XM_875336.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (p... 40 6.8
44ref|XM_875263.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (p... 40 6.8
45ref|XM_875199.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (p... 40 6.8
46ref|XM_875131.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (p... 40 6.8
47ref|XM_614683.2| PREDICTED: Bos taurus cadherin 3, P-cadherin (p... 40 6.8
48gb|BC012711.1| Mus musculus farnesyltransferase, CAAX box, alpha... 40 6.8
49ref|NM_008033.2| Mus musculus farnesyltransferase, CAAX box, alp... 40 6.8
50gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome 40 6.8
51gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, com... 40 6.8
52gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.8
53gb|AY224556.1| Oryza sativa (japonica cultivar-group) isolate 26... 40 6.8
54gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom... 40 6.8
55gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosom... 40 6.8
56gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ... 40 6.8
57emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.8
58emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.8
59emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.8
60emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.8
61dbj|AK153252.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 6.8
62dbj|AK010744.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 6.8
63dbj|AK090346.1| Mus musculus 8 days neonate male testis cDNA, RI... 40 6.8
64gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cance... 40 6.8
65dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
66dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
67gb|S45632.1| nuclear antigen-3B {exons BERF2a and BERF2b} [Epste... 40 6.8
68dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
69dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
70dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
71dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
72dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
73dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
74dbj|AK070448.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
75dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
76gb|AY106278.1| Zea mays PCO137999 mRNA sequence 40 6.8
77gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromoso... 40 6.8
78gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.8
79gb|M34440.1|HS4NA3ABC Epstein-Barr virus nuclear antigen EBNA-3A... 40 6.8
80dbj|D49744.1|MUSFASA Mouse mRNA for farnesyltransferase alpha su... 40 6.8 
>emb|AJ222778.1|HVJ222778 Hordeum vulgare mRNA for putative thiol protease, clone RG42
          Length = 350

 Score =  670 bits (338), Expect = 0.0
 Identities = 347/350 (99%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggagacatggctttcatgcgctcgtcgtcctcatccgtggctctcgctctgctgccgcta 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggagacatggctttcatgcgctcgtcgtcctcatccgtggctctcgctctgctgccgcta 60

                                                                       
Query: 62  ctggtggcagccgcattcttcatcccctccacggcttcatcagcttcacataccctcgac 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggtggcagccgcattcttcatcccctccacggcttcatcagcttcacataccctcgac 120

                                                                       
Query: 122 catggcttggatggtgaggcactgctgatgctggggaggttccatgggtggatggctgcg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catggcttggatggtgaggcactgctgatgctggggaggttccatgggtggatggctgcg 180

                                                                       
Query: 182 cacggccggtcgtaccccaccgtggaggagaagctgcgtcggttcgaggtgtaccggagc 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacggccggtcgtaccccaccgtggaggagaagctgcgtcggttcgaggtgtaccggagc 240

                                                                       
Query: 242 aacatggagttcatcgaggcggcgaaccgggacagccggatgagctacagcctcggcgag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 241 aacatggagttcatcgaggcggcgaaccgggacagccggatgagctacagcctcggcgaa 300

                                                             
Query: 302 accccgttcaccgacctcacccacgacgagttcatggccatgtacagcag 351
           |||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 301 accccgttcaccgacctcacccacgaagagttcatggccatgttcagcag 350
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>ref|XM_470991.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1152

 Score =  121 bits (61), Expect = 2e-24
 Identities = 148/177 (83%)
 Strand = Plus / Plus

                                                                       
Query: 158 aggttccatgggtggatggctgcgcacggccggtcgtaccccaccgtggaggagaagctg 217
           ||||||||| ||||||||||  |||||  |||||||||| || |||  || |||||||||
Sbjct: 163 aggttccataggtggatggcgacgcacaaccggtcgtacgcctccgccgacgagaagctg 222

                                                                       
Query: 218 cgtcggttcgaggtgtaccggagcaacatggagttcatcgaggcggcgaaccgggacagc 277
           || || |||||||| |||||||||||||||||||||||||||||| | |||||| || ||
Sbjct: 223 cggcgattcgaggtataccggagcaacatggagttcatcgaggcgaccaaccggaacggc 282

                                                                    
Query: 278 cggatgagctacagcctcggcgagaccccgttcaccgacctcacccacgacgagttc 334
            |  | | || ||  ||||| || || ||||||||||||||||||||||| ||||||
Sbjct: 283 agcctcaccttcaagctcggtgaaacgccgttcaccgacctcacccacgaggagttc 339
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score =  121 bits (61), Expect = 2e-24
 Identities = 148/177 (83%)
 Strand = Plus / Minus

                                                                          
Query: 158    aggttccatgggtggatggctgcgcacggccggtcgtaccccaccgtggaggagaagctg 217
              ||||||||| ||||||||||  |||||  |||||||||| || |||  || |||||||||
Sbjct: 463237 aggttccataggtggatggcgacgcacaaccggtcgtacgcctccgccgacgagaagctg 463178

                                                                          
Query: 218    cgtcggttcgaggtgtaccggagcaacatggagttcatcgaggcggcgaaccgggacagc 277
              || || |||||||| |||||||||||||||||||||||||||||| | |||||| || ||
Sbjct: 463177 cggcgattcgaggtataccggagcaacatggagttcatcgaggcgaccaaccggaacggc 463118

                                                                       
Query: 278    cggatgagctacagcctcggcgagaccccgttcaccgacctcacccacgacgagttc 334
               |  | | || ||  ||||| || || ||||||||||||||||||||||| ||||||
Sbjct: 463117 agcctcaccttcaagctcggtgaaacgccgttcaccgacctcacccacgaggagttc 463061
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>dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C02, full
           insert sequence
          Length = 1377

 Score =  121 bits (61), Expect = 2e-24
 Identities = 148/177 (83%)
 Strand = Plus / Plus

                                                                       
Query: 158 aggttccatgggtggatggctgcgcacggccggtcgtaccccaccgtggaggagaagctg 217
           ||||||||| ||||||||||  |||||  |||||||||| || |||  || |||||||||
Sbjct: 188 aggttccataggtggatggcgacgcacaaccggtcgtacgcctccgccgacgagaagctg 247

                                                                       
Query: 218 cgtcggttcgaggtgtaccggagcaacatggagttcatcgaggcggcgaaccgggacagc 277
           || || |||||||| |||||||||||||||||||||||||||||| | |||||| || ||
Sbjct: 248 cggcgattcgaggtataccggagcaacatggagttcatcgaggcgaccaaccggaacggc 307

                                                                    
Query: 278 cggatgagctacagcctcggcgagaccccgttcaccgacctcacccacgacgagttc 334
            |  | | || ||  ||||| || || ||||||||||||||||||||||| ||||||
Sbjct: 308 agcctcaccttcaagctcggtgaaacgccgttcaccgacctcacccacgaggagttc 364
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>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
              complete sequence
          Length = 130249

 Score =  121 bits (61), Expect = 2e-24
 Identities = 148/177 (83%)
 Strand = Plus / Minus

                                                                          
Query: 158    aggttccatgggtggatggctgcgcacggccggtcgtaccccaccgtggaggagaagctg 217
              ||||||||| ||||||||||  |||||  |||||||||| || |||  || |||||||||
Sbjct: 101989 aggttccataggtggatggcgacgcacaaccggtcgtacgcctccgccgacgagaagctg 101930

                                                                          
Query: 218    cgtcggttcgaggtgtaccggagcaacatggagttcatcgaggcggcgaaccgggacagc 277
              || || |||||||| |||||||||||||||||||||||||||||| | |||||| || ||
Sbjct: 101929 cggcgattcgaggtataccggagcaacatggagttcatcgaggcgaccaaccggaacggc 101870

                                                                       
Query: 278    cggatgagctacagcctcggcgagaccccgttcaccgacctcacccacgacgagttc 334
               |  | | || ||  ||||| || || ||||||||||||||||||||||| ||||||
Sbjct: 101869 agcctcaccttcaagctcggtgaaacgccgttcaccgacctcacccacgaggagttc 101813
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 293      ctcggcgagaccccgttcaccgacctcacccacgacgagttcatggccatgtaca 347
                |||||||||||  | | ||||||||||||| ||||||||||||| ||||||||||
Sbjct: 22051824 ctcggcgagacggcctacaccgacctcaccaacgacgagttcatcgccatgtaca 22051770
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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0635G10
          Length = 146728

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 293   ctcggcgagaccccgttcaccgacctcacccacgacgagttcatggccatgtaca 347
             |||||||||||  | | ||||||||||||| ||||||||||||| ||||||||||
Sbjct: 93888 ctcggcgagacggcctacaccgacctcaccaacgacgagttcatcgccatgtaca 93834
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>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence
          Length = 268433

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 310    caccgacctcacccacgacgagttcatggccatgtaca 347
              |||||||||||||  |||||||||||||||||||||||
Sbjct: 152295 caccgacctcaccaccgacgagttcatggccatgtaca 152332
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>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds
          Length = 1260

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 143 ctgctgatgctggggaggttccatgggtggatggctgcgcacggccggtcgtacc 197
           |||||||||||||| ||||||||  |||||||| | ||||| |||||| ||||||
Sbjct: 145 ctgctgatgctgggtaggttccaccggtggatgtcagcgcatggccggacgtacc 199



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 293 ctcggcgagaccccgttcaccgacctcacccacgacgagttcatggc 339
           |||||||||| |  |||||||||||||||  |||| |||||||||||
Sbjct: 298 ctcggcgagaacgagttcaccgacctcactaacgaggagttcatggc 344
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>gb|AY112580.1| Zea mays CL875_1 mRNA sequence
          Length = 1553

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 187 ccggtcgtaccccaccgtggaggagaagctgcgtcggttcgaggtgtaccggagcaacat 246
           |||||||||||| || | |||||||| || ||| |||||| ||||||||||  |||||||
Sbjct: 220 ccggtcgtacccgacggcggaggagaggcagcgccggttccaggtgtaccgccgcaacat 279

                          
Query: 247 ggagttcatcgaggc 261
            |||  |||||||||
Sbjct: 280 tgagcacatcgaggc 294
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>gb|AY110841.1| Zea mays CL908_1 mRNA sequence
          Length = 916

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 297 gcgagaccccgttcaccgacctcacc 322
           ||||||||||||||||||||||||||
Sbjct: 13  gcgagaccccgttcaccgacctcacc 38
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>ref|NM_189456.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1098

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 307 gttcaccgacctcacccacgacgagttca 335
           |||| ||||||||||||||||||||||||
Sbjct: 297 gttcgccgacctcacccacgacgagttca 325
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>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01,
              complete sequence
          Length = 152233

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 307    gttcaccgacctcacccacgacgagttca 335
              |||| ||||||||||||||||||||||||
Sbjct: 116726 gttcgccgacctcacccacgacgagttca 116754
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>gb|AY335487.1| Oryza sativa (japonica cultivar-group) cysteine protease CP1 mRNA,
           complete cds
          Length = 1227

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 307 gttcaccgacctcacccacgacgagttca 335
           |||| ||||||||||||||||||||||||
Sbjct: 309 gttcgccgacctcacccacgacgagttca 337
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>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 307   gttcaccgacctcacccacgacgagttca 335
             |||| ||||||||||||||||||||||||
Sbjct: 54877 gttcgccgacctcacccacgacgagttca 54905
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 307    gttcaccgacctcacccacgacgagttca 335
              |||| ||||||||||||||||||||||||
Sbjct: 455079 gttcgccgacctcacccacgacgagttca 455107
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 307      gttcaccgacctcacccacgacgagttca 335
                |||| ||||||||||||||||||||||||
Sbjct: 42848361 gttcgccgacctcacccacgacgagttca 42848389



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 302      accccgttcaccgacctcacccacgacgagttc 334
                ||||||||| |||||||||||  ||||||||||
Sbjct: 24349124 accccgttcgccgacctcaccgccgacgagttc 24349092



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 198      ccaccgtggaggagaagctg 217
                ||||||||||||||||||||
Sbjct: 33948781 ccaccgtggaggagaagctg 33948762



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 307      gttcaccgacctcacccacgacgagttc 334
                |||| ||||||||||| |||||||||||
Sbjct: 24340977 gttctccgacctcaccgacgacgagttc 24340950



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 307      gttcaccgacctcacccacgacgagttc 334
                |||| ||||||||||| |||||||||||
Sbjct: 13831712 gttcgccgacctcaccaacgacgagttc 13831685



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 307      gttcaccgacctcacccacgacgagttc 334
                |||| ||||||||||| |||||||||||
Sbjct: 13825544 gttcgccgacctcaccaacgacgagttc 13825571



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 307     gttcaccgacctcacccacgacgagttc 334
               |||| ||||||||||| |||||||||||
Sbjct: 6396028 gttcgccgacctcaccaacgacgagttc 6396001
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>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518C01
          Length = 173555

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 307   gttcaccgacctcacccacgacgagttca 335
             |||| ||||||||||||||||||||||||
Sbjct: 42095 gttcgccgacctcacccacgacgagttca 42123
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>dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H03, full
           insert sequence
          Length = 1377

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 307 gttcaccgacctcacccacgacgagttca 335
           |||| ||||||||||||||||||||||||
Sbjct: 347 gttcgccgacctcacccacgacgagttca 375
to top
>dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G09, full
           insert sequence
          Length = 1409

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 307 gttcaccgacctcacccacgacgagttca 335
           |||| ||||||||||||||||||||||||
Sbjct: 367 gttcgccgacctcacccacgacgagttca 395
to top
>dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B02, full
           insert sequence
          Length = 1377

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 307 gttcaccgacctcacccacgacgagttca 335
           |||| ||||||||||||||||||||||||
Sbjct: 347 gttcgccgacctcacccacgacgagttca 375
to top
>dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D02, full
           insert sequence
          Length = 1519

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 307 gttcaccgacctcacccacgacgagttca 335
           |||| ||||||||||||||||||||||||
Sbjct: 347 gttcgccgacctcacccacgacgagttca 375
to top
>dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D05, full
           insert sequence
          Length = 1332

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 307 gttcaccgacctcacccacgacgagttca 335
           |||| ||||||||||||||||||||||||
Sbjct: 347 gttcgccgacctcacccacgacgagttca 375
to top
>gb|AY104930.1| Zea mays PCO132946 mRNA sequence
          Length = 1422

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 206 gaggagaagctgcgtcggttcgaggtgt 233
           |||||||||||||| |||||||||||||
Sbjct: 275 gaggagaagctgcgccggttcgaggtgt 302



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 312 ccgacctcacccacgacgagttcatggcca 341
           |||||||||| ||||||||||||| |||||
Sbjct: 381 ccgacctcacgcacgacgagttcaaggcca 410
to top
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds
          Length = 1353

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                       
Query: 248 gagttcatcgaggcggcgaaccgggacagccggatgagctacagcctcggcgagaccccg 307
           ||||||||||||||||||||||| ||  || || |    |||| |||||| | || || |
Sbjct: 253 gagttcatcgaggcggcgaaccgagatggcaggctctcgtacaccctcggggtgaaccag 312

                                      
Query: 308 ttcaccgacctcacccacgacgagttc 334
           ||| |||||||||||||||| ||||||
Sbjct: 313 ttcgccgacctcacccacgaggagttc 339



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 143 ctgctgatgctggggaggttccatgggtggatggc 177
           ||||||||| ||| |||||||||||| ||||||||
Sbjct: 148 ctgctgatgatggagaggttccatggctggatggc 182
to top
>gb|DQ489716.1| Rhodococcus erythropolis strain AN12 plasmid pREA400 TraA (traA),
            PemI-like protein (pemI), and PemK-like protein (pemK)
            genes, complete cds
          Length = 9184

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 410  gtccacgagggcaccgccgccg 431
            ||||||||||||||||||||||
Sbjct: 5035 gtccacgagggcaccgccgccg 5056
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>ref|NM_192773.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1080

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 302 accccgttcaccgacctcacccacgacgagttc 334
           ||||||||| |||||||||||  ||||||||||
Sbjct: 253 accccgttcgccgacctcaccgccgacgagttc 285
to top
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E01
          Length = 166753

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 302   accccgttcaccgacctcacccacgacgagttc 334
             ||||||||| |||||||||||  ||||||||||
Sbjct: 95028 accccgttcgccgacctcaccgccgacgagttc 94996



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 307   gttcaccgacctcacccacgacgagttc 334
             |||| ||||||||||| |||||||||||
Sbjct: 86881 gttctccgacctcaccgacgacgagttc 86854
to top
>dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A05, full
           insert sequence
          Length = 1383

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 302 accccgttcaccgacctcacccacgacgagttc 334
           ||||||||| |||||||||||  ||||||||||
Sbjct: 333 accccgttcgccgacctcaccgccgacgagttc 365
to top
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 217496

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    gtgaggcactgctgatgctg 154
              ||||||||||||||||||||
Sbjct: 203263 gtgaggcactgctgatgctg 203244
to top
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 307 gttcaccgacctcacccacgacgagttc 334
           |||| ||||||||||| |||||||||||
Sbjct: 267 gttcgccgacctcaccaacgacgagttc 294
to top
>ref|XM_469786.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1460

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 307 gttcaccgacctcacccacgacgagttc 334
           |||| ||||||||||| |||||||||||
Sbjct: 330 gttcgccgacctcaccgacgacgagttc 357
to top
>ref|NM_184000.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1026

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 307 gttcaccgacctcacccacgacgagttc 334
           |||| ||||||||||| |||||||||||
Sbjct: 270 gttcgccgacctcaccaacgacgagttc 297
to top
>ref|NM_183998.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1029

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 307 gttcaccgacctcacccacgacgagttc 334
           |||| ||||||||||| |||||||||||
Sbjct: 273 gttcgccgacctcaccaacgacgagttc 300
to top
>ref|NM_190938.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1404

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ccaccgtggaggagaagctg 217
           ||||||||||||||||||||
Sbjct: 59  ccaccgtggaggagaagctg 78
to top
>ref|NM_192771.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 307 gttcaccgacctcacccacgacgagttc 334
           |||| ||||||||||| |||||||||||
Sbjct: 276 gttctccgacctcaccgacgacgagttc 303
to top
>ref|XM_476390.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 308 ttcaccgacctcacccacgacgagttcatggccatgtaca 347
           ||||||||||||||| ||| |||||||   ||||||||||
Sbjct: 271 ttcaccgacctcaccgacgccgagttcgccgccatgtaca 310
to top
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0032E21, complete sequence
          Length = 137580

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 307   gttcaccgacctcacccacgacgagttc 334
             |||| ||||||||||| |||||||||||
Sbjct: 72529 gttcgccgacctcaccgacgacgagttc 72502
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 416     gagggcaccgccgccgtcga 435
               ||||||||||||||||||||
Sbjct: 2528282 gagggcaccgccgccgtcga 2528301
to top
>gb|AC093366.9| Mus musculus chromosome 8, clone RP23-60P23, complete sequence
          Length = 230236

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 258    aggcggcgaaccgggacagccgga 281
              ||||||||| ||||||||||||||
Sbjct: 148509 aggcggcgagccgggacagccgga 148532
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 413     cacgagggcaccgccgccgt 432
               ||||||||||||||||||||
Sbjct: 2317537 cacgagggcaccgccgccgt 2317556



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 373     ggaggaggcgacggtgatcacaac 396
               |||||||||| |||||||||||||
Sbjct: 1746303 ggaggaggcgccggtgatcacaac 1746280
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>ref|XM_420326.1| PREDICTED: Gallus gallus similar to RAB39B, member RAS oncogene
           family (LOC422354), mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 tgaggcactgctgatgctgg 155
           ||||||||||||||||||||
Sbjct: 276 tgaggcactgctgatgctgg 295
to top
>ref|XM_875336.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript
            variant 6 (CDH3), mRNA
          Length = 3476

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   cgtcgtcctcatccgtggct 43
            ||||||||||||||||||||
Sbjct: 1062 cgtcgtcctcatccgtggct 1043
to top
>ref|XM_875263.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript
            variant 5 (CDH3), mRNA
          Length = 3464

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   cgtcgtcctcatccgtggct 43
            ||||||||||||||||||||
Sbjct: 1062 cgtcgtcctcatccgtggct 1043
to top
>ref|XM_875199.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript
            variant 4 (CDH3), mRNA
          Length = 3464

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   cgtcgtcctcatccgtggct 43
            ||||||||||||||||||||
Sbjct: 1062 cgtcgtcctcatccgtggct 1043
to top
>ref|XM_875131.1| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript
            variant 3 (CDH3), mRNA
          Length = 3272

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   cgtcgtcctcatccgtggct 43
            ||||||||||||||||||||
Sbjct: 1062 cgtcgtcctcatccgtggct 1043
to top
>ref|XM_614683.2| PREDICTED: Bos taurus cadherin 3, P-cadherin (placental), transcript
            variant 1 (CDH3), mRNA
          Length = 3461

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   cgtcgtcctcatccgtggct 43
            ||||||||||||||||||||
Sbjct: 1062 cgtcgtcctcatccgtggct 1043
to top
>gb|BC012711.1| Mus musculus farnesyltransferase, CAAX box, alpha, mRNA (cDNA clone
           MGC:14009 IMAGE:4019240), complete cds
          Length = 1671

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 aggcggcgaaccgggacagccgga 281
           ||||||||| ||||||||||||||
Sbjct: 75  aggcggcgagccgggacagccgga 98
to top
>ref|NM_008033.2| Mus musculus farnesyltransferase, CAAX box, alpha (Fnta), mRNA
          Length = 1883

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 aggcggcgaaccgggacagccgga 281
           ||||||||| ||||||||||||||
Sbjct: 58  aggcggcgagccgggacagccgga 81
to top
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome
          Length = 172764

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   ccatggcttggatggtgagg 140
             ||||||||||||||||||||
Sbjct: 84090 ccatggcttggatggtgagg 84071
to top
>gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, complete sequence
          Length = 174095

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    ggcttggatggtgaggcact 144
              ||||||||||||||||||||
Sbjct: 153889 ggcttggatggtgaggcact 153870
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 307      gttcaccgacctcacccacgacgagttc 334
                |||| ||||||||||| |||||||||||
Sbjct: 30731254 gttcgccgacctcaccgacgacgagttc 30731281
to top
>gb|AY224556.1| Oryza sativa (japonica cultivar-group) isolate 26646
           glycerol-3-phosphate dehydrogenase-like protein mRNA,
           partial cds
          Length = 738

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ccaccgtggaggagaagctg 217
           ||||||||||||||||||||
Sbjct: 74  ccaccgtggaggagaagctg 93
to top
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
             sequence
          Length = 157970

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 307   gttcaccgacctcacccacgacgagttc 334
             |||| ||||||||||| |||||||||||
Sbjct: 31136 gttcgccgacctcaccgacgacgagttc 31109
to top
>gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosome 9, complete sequence
          Length = 203468

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    ggcttggatggtgaggcact 144
              ||||||||||||||||||||
Sbjct: 157375 ggcttggatggtgaggcact 157394
to top
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
             sequence
          Length = 128294

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 307   gttcaccgacctcacccacgacgagttc 334
             |||| ||||||||||| |||||||||||
Sbjct: 39955 gttcgccgacctcaccgacgacgagttc 39982
to top
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    cacgagggcaccgccgccgt 432
              ||||||||||||||||||||
Sbjct: 236501 cacgagggcaccgccgccgt 236520
to top
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13
          Length = 347496

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 373   ggaggaggcgacggtgatcacaac 396
             |||||||||| |||||||||||||
Sbjct: 14893 ggaggaggcgccggtgatcacaac 14870
to top
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             8/14
          Length = 306050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   cacgagggcaccgccgccgt 432
             ||||||||||||||||||||
Sbjct: 94117 cacgagggcaccgccgccgt 94136
to top
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14
          Length = 300050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 373    ggaggaggcgacggtgatcacaac 396
              |||||||||| |||||||||||||
Sbjct: 116163 ggaggaggcgccggtgatcacaac 116140
to top
>dbj|AK153252.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830129K06
           product:farnesyltransferase, CAAX box, alpha, full
           insert sequence
          Length = 1626

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 aggcggcgaaccgggacagccgga 281
           ||||||||| ||||||||||||||
Sbjct: 52  aggcggcgagccgggacagccgga 75
to top
>dbj|AK010744.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410089B03 product:farnesyltransferase, CAAX box,
           alpha, full insert sequence
          Length = 1883

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 aggcggcgaaccgggacagccgga 281
           ||||||||| ||||||||||||||
Sbjct: 58  aggcggcgagccgggacagccgga 81
to top
>dbj|AK090346.1| Mus musculus 8 days neonate male testis cDNA, RIKEN full-length
           enriched library, clone:G630057C22
           product:farnesyltransferase, CAAX box, alpha, full
           insert sequence
          Length = 1629

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 aggcggcgaaccgggacagccgga 281
           ||||||||| ||||||||||||||
Sbjct: 57  aggcggcgagccgggacagccgga 80
to top
>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217586

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   gtgaggcactgctgatgctg 154
             ||||||||||||||||||||
Sbjct: 99966 gtgaggcactgctgatgctg 99985
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 308    ttcaccgacctcacccacgacgagttcatggccatgtaca 347
              ||||||||||||||| ||| |||||||   ||||||||||
Sbjct: 463553 ttcaccgacctcaccgacgccgagttcgccgccatgtaca 463592
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 307      gttcaccgacctcacccacgacgagttc 334
                |||| ||||||||||| |||||||||||
Sbjct: 30822678 gttcgccgacctcaccgacgacgagttc 30822705
to top
>gb|S45632.1| nuclear antigen-3B {exons BERF2a and BERF2b} [Epstein-Barr virus-2
            EBV-2, MISP, Japanese isolate, Genomic, 3840 nt]
          Length = 3840

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  ccatggcttggatggtgagg 140
            ||||||||||||||||||||
Sbjct: 1158 ccatggcttggatggtgagg 1139
to top
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665D10
          Length = 134967

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 307   gttcaccgacctcacccacgacgagttc 334
             |||| ||||||||||| |||||||||||
Sbjct: 18423 gttcgccgacctcaccaacgacgagttc 18396
to top
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 307    gttcaccgacctcacccacgacgagttc 334
              |||| ||||||||||| |||||||||||
Sbjct: 167094 gttcgccgacctcaccaacgacgagttc 167067
to top
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003D09
          Length = 161970

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ccaccgtggaggagaagctg 217
             ||||||||||||||||||||
Sbjct: 80224 ccaccgtggaggagaagctg 80205
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 307   gttcaccgacctcacccacgacgagttc 334
             |||| ||||||||||| |||||||||||
Sbjct: 69115 gttcgccgacctcaccaacgacgagttc 69088



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 307   gttcaccgacctcacccacgacgagttc 334
             |||| ||||||||||| |||||||||||
Sbjct: 62947 gttcgccgacctcaccaacgacgagttc 62974
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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 308   ttcaccgacctcacccacgacgagttcatggccatgtaca 347
             ||||||||||||||| ||| |||||||   ||||||||||
Sbjct: 65717 ttcaccgacctcaccgacgccgagttcgccgccatgtaca 65756
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>dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025P14, full
           insert sequence
          Length = 1898

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ccaccgtggaggagaagctg 217
           ||||||||||||||||||||
Sbjct: 315 ccaccgtggaggagaagctg 334
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>dbj|AK070448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F12, full
           insert sequence
          Length = 1403

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 307 gttcaccgacctcacccacgacgagttc 334
           |||| ||||||||||| |||||||||||
Sbjct: 308 gttctccgacctcaccgacgacgagttc 335
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>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1567_G09
          Length = 121388

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 308   ttcaccgacctcacccacgacgagttcatggccatgtaca 347
             ||||||||||||||| ||| |||||||   ||||||||||
Sbjct: 17465 ttcaccgacctcaccgacgccgagttcgccgccatgtaca 17504
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>gb|AY106278.1| Zea mays PCO137999 mRNA sequence
          Length = 1382

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 307 gttcaccgacctcacccacgacgagttc 334
           |||| ||||||||||| |||||||||||
Sbjct: 70  gttcgccgacctcaccaacgacgagttc 97
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>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete sequence
          Length = 231142

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    tgaggcactgctgatgctgg 155
              ||||||||||||||||||||
Sbjct: 141613 tgaggcactgctgatgctgg 141594
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    ccccaccgtggaggagaagc 215
              ||||||||||||||||||||
Sbjct: 736939 ccccaccgtggaggagaagc 736920
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>gb|M34440.1|HS4NA3ABC Epstein-Barr virus nuclear antigen EBNA-3A, EBNA-3B, and EBNA-3C
            genes, complete cds
          Length = 10089

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  ccatggcttggatggtgagg 140
            ||||||||||||||||||||
Sbjct: 4253 ccatggcttggatggtgagg 4234
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>dbj|D49744.1|MUSFASA Mouse mRNA for farnesyltransferase alpha subunit, complete cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 aggcggcgaaccgggacagccgga 281
           ||||||||| ||||||||||||||
Sbjct: 51  aggcggcgagccgggacagccgga 74


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,195,369
Number of Sequences: 3902068
Number of extensions: 3195369
Number of successful extensions: 62490
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61759
Number of HSP's gapped (non-prelim): 731
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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