Clone Information

BLAST Search Result

Clone Name	basd3l02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBH_HORVU (P12363) Photosystem II reaction center H protein (Ph...	142	6e-34
2	PSBH_WHEAT (P69555) Photosystem II reaction center H protein (Ph...	142	8e-34
3	PSBH_SECCE (P69554) Photosystem II reaction center H protein (Ph...	142	8e-34
4	PSBH_SACOF (Q6ENT5) Photosystem II reaction center H protein (Ph...	140	4e-33
5	PSBH_SACHY (Q6L373) Photosystem II reaction center H protein (Ph...	140	4e-33
6	PSBH_MAIZE (P24993) Photosystem II reaction center H protein (Ph...	140	4e-33
7	PSBH_ORYSA (P09449) Photosystem II reaction center H protein (Ph...	127	3e-29
8	PSBH_ORYNI (Q6ENE5) Photosystem II reaction center H protein (Ph...	127	3e-29
9	PSBH_LOTJA (Q9BBQ7) Photosystem II reaction center H protein (Ph...	124	2e-28
10	PSBH_OENHO (P69553) Photosystem II reaction center H protein (Ph...	122	1e-27
11	PSBH_OENAR (P69552) Photosystem II reaction center H protein (Ph...	122	1e-27
12	PSBH_CALFE (Q7YJU9) Photosystem II reaction center H protein (Ph...	120	3e-27
13	PSBH_AMBTC (Q70XX9) Photosystem II reaction center H protein (Ph...	120	3e-27
14	PSBH_SPIOL (P05146) Photosystem II reaction center H protein (Ph...	120	4e-27
15	PSBH_TOBAC (P06415) Photosystem II reaction center H protein (Ph...	119	5e-27
16	PSBH_ATRBE (Q7FNS3) Photosystem II reaction center H protein (Ph...	119	5e-27
17	PSBH_ARATH (P56780) Photosystem II reaction center H protein (Ph...	119	9e-27
18	PSBH_PEA (Q9XQR3) Photosystem II reaction center H protein (Phot...	117	3e-26
19	PSBH_PANGI (Q68RX8) Photosystem II reaction center H protein (Ph...	116	6e-26
20	PSBH_POPDE (Q36632) Photosystem II reaction center H protein (Ph...	115	8e-26
21	PSBH_NYMAL (Q6EW23) Photosystem II reaction center H protein (Ph...	115	8e-26
22	PSBH_PINTH (P41627) Photosystem II reaction center H protein (Ph...	113	4e-25
23	PSBH_PHYPA (Q6YXN1) Photosystem II reaction center H protein (Ph...	108	1e-23
24	PSBH_PINKO (Q85X08) Photosystem II reaction center H protein (Ph...	107	3e-23
25	PSBH_ANTFO (Q85CN0) Photosystem II reaction center H protein (Ph...	107	3e-23
26	PSBH_MARPO (P12160) Photosystem II reaction center H protein (Ph...	106	6e-23
27	PSBH_PSINU (Q8WHZ4) Photosystem II reaction center H protein (Ph...	101	2e-21
28	PSBH_CHAGL (Q8M9Z3) Photosystem II reaction center H protein (Ph...	101	2e-21
29	PSBH_COLOB (Q71KQ7) Photosystem II reaction center H protein (Ph...	99	1e-20
30	PSBH_ADICA (Q85FJ4) Photosystem II reaction center H protein (Ph...	98	2e-20
31	PSBH_HUPLU (Q5SD22) Photosystem II reaction center H protein (Ph...	97	5e-20
32	PSBH_SPIMX (Q71KP6) Photosystem II reaction center H protein (Ph...	94	3e-19
33	PSBH_MESVI (Q9MUV4) Photosystem II reaction center H protein (Ph...	92	2e-18
34	PSBH_KLEBI (Q71KN4) Photosystem II reaction center H protein (Ph...	89	8e-18
35	PSBH_NEPOL (Q9TKW7) Photosystem II reaction center H protein (Ph...	89	1e-17
36	PSBH_SYNEL (Q8DJ43) Photosystem II reaction center H protein (PS...	87	3e-17
37	PSBH_CHLVU (P56323) Photosystem II reaction center H protein (Ph...	87	4e-17
38	PSBH_SYNY3 (P14835) Photosystem II reaction center H protein (PS...	86	6e-17
39	PSBH_CYAPA (P48105) Photosystem II reaction center H protein (Ph...	86	6e-17
40	PSBH_SYNPX (Q7U9I7) Photosystem II reaction center H protein (PS...	85	1e-16
41	PSBH_SYNP6 (Q5N2J2) Photosystem II reaction center H protein (PS...	84	2e-16
42	PSBH_GRATL (Q6B8Y7) Photosystem II reaction center H protein (Ph...	84	3e-16
43	PSBH_CYACA (O19925) Photosystem II reaction center H protein (Ph...	84	3e-16
44	PSBH_CYAME (Q85FZ2) Photosystem II reaction center H protein (Ph...	84	4e-16
45	PSBH_PORPU (P51325) Photosystem II reaction center H protein (Ph...	83	5e-16
46	PSBH_GUITH (O78514) Photosystem II reaction center H protein (Ph...	83	7e-16
47	PSBH_ANASP (Q8YYK2) Photosystem II reaction center H protein (PS...	82	9e-16
48	PSBH_ODOSI (P49475) Photosystem II reaction center H protein (Ph...	82	2e-15
49	PSBH_EUGGR (P31555) Photosystem II reaction center H protein (Ph...	80	4e-15
50	PSBH_GLOVI (Q7NCH7) Photosystem II reaction center H protein (PS...	77	3e-14
51	PSBH_CHLRE (P22666) Photosystem II reaction center H protein (Ph...	74	3e-13
52	PSBH_PROHO (P31095) Photosystem II reaction center H protein (PS...	71	3e-12
53	PSBH_PROMP (Q7V341) Photosystem II reaction center H protein (PS...	58	2e-08
54	PSBH_PROMA (Q7VDT5) Photosystem II reaction center H protein (PS...	56	9e-08
55	PSBH_PROMM (Q7V4V2) Photosystem II reaction center H protein (PS...	50	5e-06
56	PSBH_SYNVU (P19052) Photosystem II reaction center H protein (PS...	32	1.4
57	PTAFR_CAPHI (Q9GK76) Platelet-activating factor receptor (PAF-R)...	30	4.2

>PSBH_HORVU (P12363) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  142 bits (359), Expect = 6e-34
 Identities = 70/72 (97%), Positives = 72/72 (100%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPF+GVAMALFAIFLSIILEIY
Sbjct: 1   ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGILTN
Sbjct: 61  NSSILLDGILTN 72

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>PSBH_WHEAT (P69555) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  142 bits (358), Expect = 8e-34
 Identities = 70/72 (97%), Positives = 72/72 (100%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPF+GVAMALFAIFLSIILEIY
Sbjct: 1   ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGILTN
Sbjct: 61  NSSVLLDGILTN 72

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>PSBH_SECCE (P69554) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  142 bits (358), Expect = 8e-34
 Identities = 70/72 (97%), Positives = 72/72 (100%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPF+GVAMALFAIFLSIILEIY
Sbjct: 1   ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGILTN
Sbjct: 61  NSSVLLDGILTN 72

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>PSBH_SACOF (Q6ENT5) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  140 bits (352), Expect = 4e-33
 Identities = 68/72 (94%), Positives = 72/72 (100%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSS+P+PKRTGAGSLLKPLNSEYGKVAPGWGTTPF+GVAMALFAIFLSIILEIY
Sbjct: 1   ATQTVEDSSRPKPKRTGAGSLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGILTN
Sbjct: 61  NSSVLLDGILTN 72

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>PSBH_SACHY (Q6L373) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  140 bits (352), Expect = 4e-33
 Identities = 68/72 (94%), Positives = 72/72 (100%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSS+P+PKRTGAGSLLKPLNSEYGKVAPGWGTTPF+GVAMALFAIFLSIILEIY
Sbjct: 1   ATQTVEDSSRPKPKRTGAGSLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGILTN
Sbjct: 61  NSSVLLDGILTN 72

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>PSBH_MAIZE (P24993) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  140 bits (352), Expect = 4e-33
 Identities = 68/72 (94%), Positives = 72/72 (100%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSS+P+PKRTGAGSLLKPLNSEYGKVAPGWGTTPF+GVAMALFAIFLSIILEIY
Sbjct: 1   ATQTVEDSSRPKPKRTGAGSLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGILTN
Sbjct: 61  NSSVLLDGILTN 72

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>PSBH_ORYSA (P09449) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  127 bits (319), Expect = 3e-29
 Identities = 61/72 (84%), Positives = 68/72 (94%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSS+P P++T  G+LLKPLNSEYGKVAPGWGTTPF+GVAMALFA+FLSIILEIY
Sbjct: 1   ATQTVEDSSRPGPRQTRVGNLLKPLNSEYGKVAPGWGTTPFMGVAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGIL N
Sbjct: 61  NSSVLLDGILMN 72

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>PSBH_ORYNI (Q6ENE5) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  127 bits (319), Expect = 3e-29
 Identities = 61/72 (84%), Positives = 68/72 (94%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSS+P P++T  G+LLKPLNSEYGKVAPGWGTTPF+GVAMALFA+FLSIILEIY
Sbjct: 1   ATQTVEDSSRPGPRQTRVGNLLKPLNSEYGKVAPGWGTTPFMGVAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGIL N
Sbjct: 61  NSSVLLDGILMN 72

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>PSBH_LOTJA (Q9BBQ7) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  124 bits (312), Expect = 2e-28
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSS+ RP++T  GSLLKPLNSEYGKVAPGWGTTP +G+AMALFAIFLSIILEIY
Sbjct: 1   ATQTVEDSSRARPRQTSVGSLLKPLNSEYGKVAPGWGTTPLMGIAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI  N
Sbjct: 61  NSSILLDGISMN 72

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>PSBH_OENHO (P69553) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  122 bits (305), Expect = 1e-27
 Identities = 58/72 (80%), Positives = 65/72 (90%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQT E+SS+ RPK+TG G LLKPLNSEYGKVAPGWGTTP +G+AMALFA+FLSIILEIY
Sbjct: 1   ATQTAEESSRARPKKTGLGGLLKPLNSEYGKVAPGWGTTPLMGLAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI  N
Sbjct: 61  NSSVLLDGISMN 72

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>PSBH_OENAR (P69552) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  122 bits (305), Expect = 1e-27
 Identities = 58/72 (80%), Positives = 65/72 (90%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQT E+SS+ RPK+TG G LLKPLNSEYGKVAPGWGTTP +G+AMALFA+FLSIILEIY
Sbjct: 1   ATQTAEESSRARPKKTGLGGLLKPLNSEYGKVAPGWGTTPLMGLAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI  N
Sbjct: 61  NSSVLLDGISMN 72

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>PSBH_CALFE (Q7YJU9) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  120 bits (301), Expect = 3e-27
 Identities = 60/72 (83%), Positives = 65/72 (90%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVE SS+  P+RT  G LLKPLNSEYGKVAPGWGTTPF+GVAMALFAIFLSIILEIY
Sbjct: 1   ATQTVEGSSRSGPRRTLTGDLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI T+
Sbjct: 61  NSSVLLDGISTS 72

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>PSBH_AMBTC (Q70XX9) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score =  120 bits (301), Expect = 3e-27
 Identities = 59/70 (84%), Positives = 64/70 (91%)
 Frame = +1

Query: 22  MATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEI 201
           M TQ+VEDSS+  P+RT  G LLKPLNSEYGKVAPGWGTTPF+GVAMALFAIFLSIILEI
Sbjct: 1   MVTQSVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEI 60

Query: 202 YNSSLLLDGI 231
           YNSS+LLDGI
Sbjct: 61  YNSSVLLDGI 70

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>PSBH_SPIOL (P05146) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  120 bits (300), Expect = 4e-27
 Identities = 59/72 (81%), Positives = 64/72 (88%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVE SS+ RPK T  G+LLKPLNSEYGKVAPGWGTTP +GVAMALFA+FLSIILEIY
Sbjct: 1   ATQTVESSSRSRPKPTTVGALLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI  N
Sbjct: 61  NSSVLLDGISMN 72

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>PSBH_TOBAC (P06415) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  119 bits (299), Expect = 5e-27
 Identities = 58/72 (80%), Positives = 64/72 (88%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVE+SS+  P+RT  G LLKPLNSEYGKVAPGWGTTP +GVAMALFA+FLSIILEIY
Sbjct: 1   ATQTVENSSRSGPRRTAVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI  N
Sbjct: 61  NSSVLLDGISMN 72

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>PSBH_ATRBE (Q7FNS3) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  119 bits (299), Expect = 5e-27
 Identities = 58/72 (80%), Positives = 64/72 (88%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVE+SS+  P+RT  G LLKPLNSEYGKVAPGWGTTP +GVAMALFA+FLSIILEIY
Sbjct: 1   ATQTVENSSRSGPRRTAVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI  N
Sbjct: 61  NSSVLLDGISMN 72

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>PSBH_ARATH (P56780) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  119 bits (297), Expect = 9e-27
 Identities = 58/72 (80%), Positives = 63/72 (87%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVEDSS+  P+ T  G LLKPLNSEYGKVAPGWGTTP +GVAMALFA+FLSIILEIY
Sbjct: 1   ATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI  N
Sbjct: 61  NSSVLLDGISVN 72

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>PSBH_PEA (Q9XQR3) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  117 bits (293), Expect = 3e-26
 Identities = 57/72 (79%), Positives = 63/72 (87%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVE+SS+  P+RT  G LLKPLNSEYGKVAPGWGTTP +G+AMALFA+FLSIILEIY
Sbjct: 1   ATQTVENSSRSGPRRTAVGDLLKPLNSEYGKVAPGWGTTPLMGIAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSSLLLD I  N
Sbjct: 61  NSSLLLDQISMN 72

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>PSBH_PANGI (Q68RX8) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  116 bits (290), Expect = 6e-26
 Identities = 58/72 (80%), Positives = 63/72 (87%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQTVE+ S+ RPK T  G+LLKPLNSEYGKVAPGWGTTP +GVAMALFAIFLSIILEIY
Sbjct: 1   ATQTVENGSRSRPKPTTVGNLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLD I  N
Sbjct: 61  NSSVLLDEISMN 72

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>PSBH_POPDE (Q36632) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  115 bits (289), Expect = 8e-26
 Identities = 57/72 (79%), Positives = 63/72 (87%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQ+VE SS+  P+RT  G LLKPLNSEYGKVAPGWGTTP +GVAMALFA+FLSIILEIY
Sbjct: 1   ATQSVEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGILTN 240
           NSS+LLDGI  N
Sbjct: 61  NSSVLLDGISMN 72

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>PSBH_NYMAL (Q6EW23) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 72

 Score =  115 bits (289), Expect = 8e-26
 Identities = 56/69 (81%), Positives = 62/69 (89%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQT+E SS+  P+RT  G LLKPLNSEYGKVAPGWGTTP +GVAMALFA+FLSIILEIY
Sbjct: 1   ATQTIEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDGI
Sbjct: 61  NSSVLLDGI 69

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>PSBH_PINTH (P41627) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 74

 Score =  113 bits (283), Expect = 4e-25
 Identities = 54/69 (78%), Positives = 61/69 (88%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQT++D+SK  PK T  G+ LKPLNSEYGKVAPGWGTTP +G AMALFA+FLSIILEIY
Sbjct: 1   ATQTIDDTSKTTPKETLVGTTLKPLNSEYGKVAPGWGTTPLMGFAMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDGI
Sbjct: 61  NSSVLLDGI 69

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>PSBH_PHYPA (Q6YXN1) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score =  108 bits (270), Expect = 1e-23
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQ ++D+ K + KR+G G +LKPLNSEYGKVAPGWGTTP +GVAM LFA+FL IILE+Y
Sbjct: 1   ATQIIDDTPKTKGKRSGLGDILKPLNSEYGKVAPGWGTTPLMGVAMGLFAVFLVIILELY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDG+
Sbjct: 61  NSSVLLDGV 69

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>PSBH_PINKO (Q85X08) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 74

 Score =  107 bits (267), Expect = 3e-23
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQT++D+SK  P+ T  G+ LKPLNSEYGKVAPGWGTT  +G  MALFA+FLSIILEIY
Sbjct: 1   ATQTIDDTSKITPRETRVGTSLKPLNSEYGKVAPGWGTTALMGFTMALFAVFLSIILEIY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDGI
Sbjct: 61  NSSVLLDGI 69

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>PSBH_ANTFO (Q85CN0) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score =  107 bits (267), Expect = 3e-23
 Identities = 47/69 (68%), Positives = 61/69 (88%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQ ++D+ K + +R+G G++LKPLNSEYGKVAPGWGTTP +G+AM LFA+FL IILE+Y
Sbjct: 1   ATQIIDDTPKTKGRRSGIGNILKPLNSEYGKVAPGWGTTPLMGIAMGLFAVFLVIILELY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDG+
Sbjct: 61  NSSVLLDGV 69

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>PSBH_MARPO (P12160) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score =  106 bits (264), Expect = 6e-23
 Identities = 46/69 (66%), Positives = 60/69 (86%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQ ++D+ K + K++G G +LKPLNSEYGKVAPGWGTTP +G+ MALFA+FL +ILE+Y
Sbjct: 1   ATQIIDDTPKTKGKKSGIGDILKPLNSEYGKVAPGWGTTPLMGIMMALFAVFLVVILELY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDG+
Sbjct: 61  NSSVLLDGV 69

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>PSBH_PSINU (Q8WHZ4) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score =  101 bits (251), Expect = 2e-21
 Identities = 47/69 (68%), Positives = 58/69 (84%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           AT+  +D+ + +PK++G G  LKPLNSEYG+VAPGWGTTP +G  MALFAIFL IILEIY
Sbjct: 1   ATKIFDDALRAKPKQSGLGVFLKPLNSEYGRVAPGWGTTPLMGFFMALFAIFLVIILEIY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDG+
Sbjct: 61  NSSVLLDGL 69

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>PSBH_CHAGL (Q8M9Z3) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score =  101 bits (251), Expect = 2e-21
 Identities = 48/69 (69%), Positives = 59/69 (85%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           AT+T+++S K + +R+  G +LKPLNSEYGKVAPGWGTT  +GV MALFA+FL IILEIY
Sbjct: 1   ATKTIDNSIKLKGRRSAVGDILKPLNSEYGKVAPGWGTTVLMGVFMALFAVFLVIILEIY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDGI
Sbjct: 61  NSSVLLDGI 69

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>PSBH_COLOB (Q71KQ7) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 78

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 45/69 (65%), Positives = 59/69 (85%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           AT+T+ ++S+ + +RT  G +LKPLNSEYGKVAPGWGTT  +GV +ALFA+FL IILE+Y
Sbjct: 1   ATRTINNTSQTKGRRTSVGDVLKPLNSEYGKVAPGWGTTVLMGVFIALFAVFLVIILELY 60

Query: 205 NSSLLLDGI 231
           N+S+LLDGI
Sbjct: 61  NASVLLDGI 69

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>PSBH_ADICA (Q85FJ4) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 47/69 (68%), Positives = 57/69 (82%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           AT+ ++++ K +PK +  G +LKPLNSEYGKVAPGWGTTP +G  MALFAIFL  ILEIY
Sbjct: 1   ATKVLDETPKGKPKISFLGMVLKPLNSEYGKVAPGWGTTPLMGFFMALFAIFLVTILEIY 60

Query: 205 NSSLLLDGI 231
           NSS+LLDGI
Sbjct: 61  NSSVLLDGI 69

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>PSBH_HUPLU (Q5SD22) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 47/69 (68%), Positives = 55/69 (79%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           ATQ  + S + + K TG G+ LKPLNSEYGKVAPGWGTTP +GVAMA FA+F  IILE+Y
Sbjct: 1   ATQISDISRRTKVKSTGLGNALKPLNSEYGKVAPGWGTTPIMGVAMASFAVFSVIILELY 60

Query: 205 NSSLLLDGI 231
           NSS+ LDGI
Sbjct: 61  NSSVSLDGI 69

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>PSBH_SPIMX (Q71KP6) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 77

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = +1

Query: 25  ATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIY 204
           AT+  +D      K+T  G +LKPLNSEYGKVAPGWGTT  +GV MALFA+FL IILEIY
Sbjct: 1   ATKINDDILSTPGKKTSVGDILKPLNSEYGKVAPGWGTTVLMGVFMALFAVFLVIILEIY 60

Query: 205 NSSLLLDGI 231
           N+S+LLDGI
Sbjct: 61  NASVLLDGI 69

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>PSBH_MESVI (Q9MUV4) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 73

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGILTN 240
           KRT  G+ LKPLNSEYGKVAPGWGTT  +GV MALFA+FL IIL+IYN+S+LLDGI  N
Sbjct: 8   KRTVVGNFLKPLNSEYGKVAPGWGTTVLMGVFMALFAVFLVIILQIYNASVLLDGIPAN 66

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>PSBH_KLEBI (Q71KN4) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 78

 Score = 89.4 bits (220), Expect = 8e-18
 Identities = 45/70 (64%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
 Frame = +1

Query: 25  ATQTVE-DSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEI 201
           AT+T++ D +K RP      S+LKPLN+EYGKVAPGWGTT  +GV MALFA+FL IILE+
Sbjct: 1   ATKTLDQDPNKQRPG-AAVSSVLKPLNAEYGKVAPGWGTTVLMGVFMALFAVFLVIILEL 59

Query: 202 YNSSLLLDGI 231
           YN+S+LLDG+
Sbjct: 60  YNASVLLDGV 69

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>PSBH_NEPOL (Q9TKW7) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 81

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           K T  G+ LKPLNSEYGKVAPGWGTTP +G+ MALFA+FL IILEIYNSSL+LD +
Sbjct: 17  KITPLGTALKPLNSEYGKVAPGWGTTPVMGLFMALFAVFLLIILEIYNSSLILDDV 72

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>PSBH_SYNEL (Q8DJ43) Photosystem II reaction center H protein (PSII-H)|
          Length = 66

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 39/56 (69%), Positives = 47/56 (83%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           +RT  G +L+PLNSEYGKVAPGWGTTP + V M LF +FL IILEIYNS+L+LDG+
Sbjct: 3   RRTWLGDILRPLNSEYGKVAPGWGTTPLMAVFMGLFLVFLLIILEIYNSTLILDGV 58

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>PSBH_CHLVU (P56323) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 79

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +1

Query: 70  TGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           T  G+LLKPLNSEYGKVAPGWGTT  +G+ MALFA+FL IILEIYNSS+LLD +
Sbjct: 17  TPLGTLLKPLNSEYGKVAPGWGTTVLMGIFMALFAVFLVIILEIYNSSVLLDDV 70

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>PSBH_SYNY3 (P14835) Photosystem II reaction center H protein (PSII-H)|
          Length = 63

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 39/55 (70%), Positives = 47/55 (85%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDG 228
           +RT  G +L+PLNSEYGKV PGWGTTP +GV MALF +FL IIL+IYNSSL+L+G
Sbjct: 2   QRTRLGDILRPLNSEYGKVVPGWGTTPVMGVFMALFLVFLLIILQIYNSSLILEG 56

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>PSBH_CYAPA (P48105) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 67

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 38/57 (66%), Positives = 48/57 (84%)
 Frame = +1

Query: 61  PKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           P+RT  G++L+PLNSEYGKVAPGWGTTP + V M LF +FL II++IYNSSLLL+ +
Sbjct: 2   PQRTALGNILRPLNSEYGKVAPGWGTTPLMAVFMLLFFVFLLIIIQIYNSSLLLENV 58

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>PSBH_SYNPX (Q7U9I7) Photosystem II reaction center H protein (PSII-H)|
          Length = 66

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 37/59 (62%), Positives = 47/59 (79%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGILTN 240
           +RT  G LL+PLNSEYGKV PGWGTTP +G+ M LF +FL +IL++YN SL+L+GI  N
Sbjct: 3   QRTRLGDLLRPLNSEYGKVVPGWGTTPVMGIFMVLFLVFLLVILQLYNKSLILEGINVN 61

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>PSBH_SYNP6 (Q5N2J2) Photosystem II reaction center H protein (PSII-H)|
          Length = 67

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 39/54 (72%), Positives = 46/54 (85%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLD 225
           +RT  G +L+PLNSEYGKVAPGWGTTP +GV M LF +FL IIL+IYNSSL+LD
Sbjct: 3   QRTRLGDILRPLNSEYGKVAPGWGTTPVMGVFMLLFFVFLLIILQIYNSSLVLD 56

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>PSBH_GRATL (Q6B8Y7) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 67

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = +1

Query: 67  RTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           RT  G +L+PLNSEYGKVAPGWGTTP +GV M LF +FL IIL+IYNSSL+L+ +
Sbjct: 4   RTRLGEILRPLNSEYGKVAPGWGTTPIMGVFMLLFFLFLLIILQIYNSSLILENV 58

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>PSBH_CYACA (O19925) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 67

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = +1

Query: 67  RTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           +T  G LL+PLNS+YGKVAPGWGTTP +G+ MALF +FL IIL+IYNSSL+L+ +
Sbjct: 4   KTRLGELLRPLNSQYGKVAPGWGTTPIMGIFMALFLLFLIIILQIYNSSLILENL 58

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>PSBH_CYAME (Q85FZ2) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 64

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = +1

Query: 67  RTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           RT  G +L+PLNS+YGKVAPGWGTTP +GV M LF +FL IIL+IYNSSLLL+ +
Sbjct: 4   RTRLGEILRPLNSQYGKVAPGWGTTPIMGVFMVLFLLFLVIILQIYNSSLLLNDV 58

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>PSBH_PORPU (P51325) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 67

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +1

Query: 67  RTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           RT  G +L+PLNSEYGKVAPGWGTTP +G+ M LF +FL IIL+IYNSSL+L+ +
Sbjct: 4   RTRLGEILRPLNSEYGKVAPGWGTTPIMGIFMLLFFLFLLIILQIYNSSLVLENV 58

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>PSBH_GUITH (O78514) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 67

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 38/55 (69%), Positives = 45/55 (81%)
 Frame = +1

Query: 67  RTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           RT  G LL+PLNSEYGKVAPGWGTTP +G  M LF +FL IIL+IYNSSL+L+ +
Sbjct: 4   RTRLGELLRPLNSEYGKVAPGWGTTPAMGFVMLLFFLFLLIILQIYNSSLILENV 58

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>PSBH_ANASP (Q8YYK2) Photosystem II reaction center H protein (PSII-H)|
          Length = 62

 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           +RT  G +L+PLNSEYGKVAPGWGTTP +GV MALF +FL IIL++YN S+L+  +
Sbjct: 3   QRTRLGDILRPLNSEYGKVAPGWGTTPVMGVFMALFLVFLLIILQLYNKSILIQDV 58

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>PSBH_ODOSI (P49475) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 67

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = +1

Query: 67  RTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           RT  G +L+PLN+EYGKVAPGWGTTP +GV M  F +FL IIL+IYNSSL+++ +
Sbjct: 4   RTRLGEILRPLNAEYGKVAPGWGTTPIMGVVMLAFLVFLLIILQIYNSSLIIENV 58

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>PSBH_EUGGR (P31555) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 70

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 39/68 (57%), Positives = 50/68 (73%)
 Frame = +1

Query: 22  MATQTVEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEI 201
           M T +   +S  + K T  G++LKPLNS+YGKV PGWGT   + + M LFAIFL+IILEI
Sbjct: 1   MTTISKNKTSNSKGKTTTLGTILKPLNSKYGKVLPGWGTAGIMLIFMTLFAIFLTIILEI 60

Query: 202 YNSSLLLD 225
           YNSS++LD
Sbjct: 61  YNSSVILD 68

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>PSBH_GLOVI (Q7NCH7) Photosystem II reaction center H protein (PSII-H)|
          Length = 78

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 35/56 (62%), Positives = 44/56 (78%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           +RT  G  LKPLNSE GK +PGWGTTP +G  +ALF +FL IIL+I N+SLLL+G+
Sbjct: 3   RRTWLGDRLKPLNSEIGKASPGWGTTPIMGALIALFGVFLIIILQIANNSLLLEGV 58

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>PSBH_CHLRE (P22666) Photosystem II reaction center H protein (Photosystem II|
           10 kDa phosphoprotein) (PSII-H)
          Length = 87

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = +1

Query: 70  TGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           T  G+LL+PLNSE GKV PGWGTT  + V + LFA FL IILEIYNSSL+LD +
Sbjct: 23  TPLGTLLRPLNSEAGKVLPGWGTTVLMAVFILLFAAFLLIILEIYNSSLILDDV 76

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>PSBH_PROHO (P31095) Photosystem II reaction center H protein (PSII-H)|
          Length = 64

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGILTN 240
           ++T   + LKP NS  GKV PGWGTTP +G+ M L  +FL IIL+IYNS+++LD    N
Sbjct: 3   QKTALSNFLKPFNSNAGKVVPGWGTTPLMGLFMGLLFVFLLIILQIYNSTIVLDAFSVN 61

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>PSBH_PROMP (Q7V341) Photosystem II reaction center H protein (PSII-H)|
          Length = 66

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = +1

Query: 64  KRTGAGSLLKPL-NSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDG 228
           ++T  G+LLK + NS  GKV PGWG  P + V   L  +FL I+L+IYN SLLL G
Sbjct: 3   QKTALGTLLKAIGNSGQGKVVPGWGAVPIMTVIGLLLLVFLVILLQIYNQSLLLQG 58

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>PSBH_PROMA (Q7VDT5) Photosystem II reaction center H protein (PSII-H)|
          Length = 67

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = +1

Query: 64  KRTGAGSLLKPL-NSEYGKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDG 228
           ++T  GSLLK + NS  GKV  GWG  P +     L  +FL I+L+IYN SLLL G
Sbjct: 3   QKTAVGSLLKSIGNSGQGKVVAGWGAVPVMAFVGVLLLVFLVILLQIYNQSLLLQG 58

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>PSBH_PROMM (Q7V4V2) Photosystem II reaction center H protein (PSII-H)|
          Length = 62

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 70  TGAGSLLKPLNSEY-GKVAPGWGTTPFLGVAMALFAIFLSIILEIYNSSLLLDGI 231
           T  G+L+K L     GKV PGWGTTP +     +  IFL  IL+IYN SLLL  I
Sbjct: 5   TRLGNLIKSLPGYAPGKVVPGWGTTPVMAGIGFMLLIFLVTILQIYNQSLLLQSI 59

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>PSBH_SYNVU (P19052) Photosystem II reaction center H protein (PSII-H)|
           (Fragment)
          Length = 20

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 64  KRTGAGSLLKPLNSEYGKV 120
           +RT  G +L+PLNSEYGKV
Sbjct: 2   RRTWLGDILRPLNSEYGKV 20

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>PTAFR_CAPHI (Q9GK76) Platelet-activating factor receptor (PAF-R) (PAFr)|
          Length = 342

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +1

Query: 37  VEDSSKPRPKRTGAGSLLKPLNSEYGKVAPGWGTTPFLGVAMAL-FAIFLSIILEIYNSS 213
           V DS+   PK+TG+G++ +     Y K     G+ P L + + L F+ FL  ++ ++ + 
Sbjct: 154 VLDSTNSEPKKTGSGNITRCF-EHYEK-----GSIPVLIIHIFLVFSFFLVFLIILFCNL 207

Query: 214 LLLDGILTN*VSTN*N*EVR 273
           +++  +LT  V    N EV+
Sbjct: 208 VIIRTLLTQQVQMQRNAEVK 227


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,670,116
Number of Sequences: 219361
Number of extensions: 1448191
Number of successful extensions: 3387
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 3332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3387
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result