ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3m13 |
|---|---|
| Clone Library Name | barley_pub |
>ZDHC5_PANTR (Q2THX1) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 5) (DHHC-5) Length = 715 Score = 33.9 bits (76), Expect = 0.38 Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 11/83 (13%) Frame = +2 Query: 137 RRTEHAGRPGVVNGGPRHRQSSPESTAALARH---ASGRRTKALRAGPTRQLERER---- 295 ++ E P +V GP HR+ SP L+RH + R K LR P + E Sbjct: 508 QQREAERHPRLVPTGPTHREPSPVRYDNLSRHIVASLQEREKLLRQSPPLPVREEEPGLG 567 Query: 296 ----ESQPARWISGRAPRAFSSS 352 +S P SG APR SSS Sbjct: 568 DSGIQSTPG---SGHAPRTSSSS 587
>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding| protein MBD6) Length = 1003 Score = 33.9 bits (76), Expect = 0.38 Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 1/93 (1%) Frame = +3 Query: 210 PLLPWPGTRAGGGRRPYGQAPRVS*RERERVNPPDG*VDAPPGHFRLLGGKAHSSQMRD* 389 P LP P T G RRP QAP S + P PP FRLL G+ + R Sbjct: 333 PPLPPPSTLQG--RRPRAQAPSAS--HSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSR 388 Query: 390 LLCPGARMQLFILQTSPWHTITNIF-LLGTPIP 485 P Q F L + ++ LLG P P Sbjct: 389 PRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTP 421
>PHYB_SOYBN (P42499) Phytochrome B| Length = 1156 Score = 33.5 bits (75), Expect = 0.49 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -3 Query: 163 RPTCVLGAT-GRIHSCRTQSLGRAGSSTPLAVAMTGVGEDEQG 38 +P C++G+T G H C Q + GS L +A+ G DE+G Sbjct: 343 QPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVIINGNDEEG 385
>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent helicase| CHD1) Length = 1468 Score = 33.1 bits (74), Expect = 0.64 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = +2 Query: 248 TKALRAGPTRQLERERESQPARWISGRAPRAFSSSRREGAFFPNARLAALPRGPDAII 421 +K L GP+++ R+ +PA P SS G P+ R+ ALP+GP A+I Sbjct: 1279 SKKLPTGPSKK----RQRKPANHSKSMTPEITSSEPANGP--PSKRMKALPKGPAALI 1330
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%) Frame = +2 Query: 74 GQGRARAGPPQALGPT*MDAPRRTE---HAGRPGVVNGGPRHRQSSPESTAALARHASGR 244 G G G P+ G APR + RPG +GGPR + + A+ R GR Sbjct: 211 GGGPRPGGAPRPQGGQRSGAPRDGQGGPRGQRPGPGSGGPRPQGGNAAGAASQERQGGGR 270 Query: 245 RTKALRAGPT 274 R PT Sbjct: 271 RPSPAMMPPT 280
>ZDHC5_PONPY (Q5R838) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 5) (DHHC-5) Length = 715 Score = 32.0 bits (71), Expect = 1.4 Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 11/83 (13%) Frame = +2 Query: 137 RRTEHAGRPGVVNGGPRHRQSSPESTAALARH---ASGRRTKALRAGPTRQLERER---- 295 ++ E P +V GP HR+ SP L+RH + R K LR P E Sbjct: 508 QQREAERHPRLVPTGPTHREPSPVRYDNLSRHIVASLQEREKLLRQSPPLPGREEEPGLG 567 Query: 296 ----ESQPARWISGRAPRAFSSS 352 +S P SG APR SSS Sbjct: 568 DSGIQSTPG---SGHAPRTSSSS 587
>ZDHC5_HUMAN (Q9C0B5) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 5) (DHHC-5) (Zinc finger protein 375) Length = 715 Score = 32.0 bits (71), Expect = 1.4 Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 11/83 (13%) Frame = +2 Query: 137 RRTEHAGRPGVVNGGPRHRQSSPESTAALARH---ASGRRTKALRAGPTRQLERER---- 295 ++ E P +V GP HR+ SP L+RH + R K LR P E Sbjct: 508 QQREAERHPRLVPTGPTHREPSPVRYDNLSRHIVASLQEREKLLRQSPPLPGREEEPGLG 567 Query: 296 ----ESQPARWISGRAPRAFSSS 352 +S P SG APR SSS Sbjct: 568 DSGIQSTPG---SGHAPRTSSSS 587
>TAOK1_HUMAN (Q7L7X3) Serine/threonine-protein kinase TAO1 (EC 2.7.11.1) (Thousand| and one amino acid protein 1) (STE20-like kinase PSK2) (Kinase from chicken homolog B) (hKFC-B) Length = 1001 Score = 32.0 bits (71), Expect = 1.4 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +2 Query: 80 GRARAGPPQALGPT*MDAPRRTEHAGRP--GVVNGGPRHRQSSPESTAALARHASGRRTK 253 G GPPQA G P+ H P GV G ++SP+ AL R ASG RT+ Sbjct: 923 GHPMGGPPQAWGHPMQGGPQPWGHPSGPMQGVPRGSSMGVRNSPQ---ALRRTASGGRTE 979
>PHYE_ARATH (P42498) Phytochrome E| Length = 1112 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -3 Query: 163 RPTCVLGATGRI-HSCRTQSLGRAGSSTPLAVAMTGVGED 47 RP C++ +T R H C TQ + GS LA+A+ G+D Sbjct: 307 RPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKD 346
>KI3S1_HUMAN (Q14943) Killer cell immunoglobulin-like receptor 3DS1 precursor| (MHC class I NK cell receptor) (Natural killer-associated transcript 10) (NKAT-10) Length = 387 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +3 Query: 135 PVAPSTQVGRAS*MVALVTGNHRRSPLLPWPGTRAGGGRR 254 P +P+ ++ MV +VTGNHR+ LL PG G R Sbjct: 100 PHSPTGWSAPSNPMVIMVTGNHRKPSLLAHPGPLVKSGER 139
>CI066_HUMAN (Q5T8R8) Protein C9orf66| Length = 295 Score = 31.6 bits (70), Expect = 1.9 Identities = 39/122 (31%), Positives = 44/122 (36%), Gaps = 10/122 (8%) Frame = +2 Query: 80 GRARAGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSS----PESTAALARHA--SG 241 G AGP P + G PG+ PR R S P S A L A SG Sbjct: 53 GEDLAGPSAGAAARPAAPPPQPREPGAPGLRRAPPRTRMDSSGLGPCSEAPLHTSAGLSG 112 Query: 242 RRTKALRAGPTRQLERERESQPARWISGRAPRA----FSSSRREGAFFPNARLAALPRGP 409 R +A LERER + AR SG P A S E R+AA P Sbjct: 113 RNLRAAGGVLPVDLERERAALCARQ-SGHGPPAVRWLLGSRGAESGGLARRRVAAEHAQP 171 Query: 410 DA 415 A Sbjct: 172 SA 173
>THCF_RHOER (O05691) Non-heme haloperoxidase (EC 1.11.1.-)| Length = 274 Score = 31.2 bits (69), Expect = 2.4 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 1/79 (1%) Frame = +2 Query: 74 GQGR-ARAGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPESTAALARHASGRRT 250 G GR A+ G + DA H G VV+ G H E +ARH +GR Sbjct: 57 GHGRSAQVGHGHDMDHYAADAAAVVAHLGLRDVVHVG--HSTGGGEVARYVARHGAGRVA 114 Query: 251 KALRAGPTRQLERERESQP 307 KA+ G L + ES P Sbjct: 115 KAVLIGAVPPLMVQTESNP 133
>PHYB_TOBAC (P29130) Phytochrome B| Length = 1132 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = -3 Query: 163 RPTCVLGATGRI-HSCRTQSLGRAGS--STPLAVAMTGVGEDEQGAMSTER 20 +P C++G+T R H C Q + GS S LAV + G E+ G S+ R Sbjct: 321 QPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMR 371
>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 31.2 bits (69), Expect = 2.4 Identities = 32/92 (34%), Positives = 36/92 (39%), Gaps = 18/92 (19%) Frame = +2 Query: 92 AGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPESTAAL--ARH----------- 232 AGPP+A R+E PG G HR+ SPE A RH Sbjct: 897 AGPPEA----------RSERGRGPGPEGGRRHHRRGSPEEAAEREPRRHRAHRHQDPSKE 946 Query: 233 ---ASGRRTKALRAGPTRQLERERES--QPAR 313 A G R R GP R RE ES +PAR Sbjct: 947 CAGAKGERRARHRGGP-RAGPREAESGEEPAR 977
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 30.8 bits (68), Expect = 3.2 Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Frame = +2 Query: 74 GQGRARAGPP-QALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPESTAALARHASGRRT 250 G+GR R G L T E AG P G R R P + A GRR Sbjct: 589 GRGRGRGGRRGSGLSGT-------REDAGSPSARRGEQRRRGHGPPAAGAAQVSTRGRRA 641 Query: 251 KALRAGPTRQ---LERERESQPAR 313 + R G Q L R R+ P R Sbjct: 642 RGQRTGEEAQDGLLPRGRDRLPLR 665
>ZDHC5_MOUSE (Q8VDZ4) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 5) (DHHC-5) Length = 715 Score = 30.4 bits (67), Expect = 4.2 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 11/83 (13%) Frame = +2 Query: 137 RRTEHAGRPGVVNGGPRHRQSSPESTAALARH---ASGRRTKALRAGPTRQLERER---- 295 ++ E P ++ GP HR+ SP L+RH + R K LR P E Sbjct: 508 QQREAERHPRLLPTGPPHREPSPVRYDNLSRHIVASLQEREKLLRQSPPLAGREEEPGLG 567 Query: 296 ----ESQPARWISGRAPRAFSSS 352 +S P SG APR SSS Sbjct: 568 DSGIQSTPG---SGHAPRTSSSS 587
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/54 (27%), Positives = 25/54 (46%) Frame = -2 Query: 581 KGNMVISIVRSHSENGTNMTGLTRRRRGLWNHWNRSPEQKDISDCVPRASLQNK 420 K ++ +VR + + LT R+G W +R PE+K+ S L+ K Sbjct: 860 KHRLLSQVVRPQESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEK 913
>CWC26_ASPFU (Q4W9Z9) Pre-mRNA-splicing factor cwc26| Length = 344 Score = 30.4 bits (67), Expect = 4.2 Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 4/106 (3%) Frame = +2 Query: 56 DAGHCHGQGRARAGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPESTAALARHA 235 D G + ARAG A M A + RHR+ E+ + R A Sbjct: 141 DGGELRMESGARAGLQTAEQTAAMVAAQERRKKAEAA------RHRERPAEAQETIYRDA 194 Query: 236 SGR----RTKALRAGPTRQLERERESQPARWISGRAPRAFSSSRRE 361 SGR K A Q +RE+E + G RA +RR+ Sbjct: 195 SGRIINVALKRAEARRAEQEKREKEEAAKEALMGDVQRAEREARRQ 240
>TAO1B_XENLA (Q7ZYJ0) Serine/threonine-protein kinase TAO1-B (EC 2.7.11.1)| (Thousand and one amino acid protein 1-B) Length = 1001 Score = 30.4 bits (67), Expect = 4.2 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +2 Query: 80 GRARAGPPQALGPT*MDAPRRTEH--AGRPGVVNGGPRHRQSSPESTAALARHASGRRTK 253 G AGPPQA G P+ H GV G ++SP+ AL R ASG RT+ Sbjct: 923 GHPMAGPPQAWGHPMQGGPQPWGHPSGSVQGVSRGSTMGVRNSPQ---ALRRTASGGRTE 979
>PHYB_SOLTU (P34094) Phytochrome B| Length = 1130 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -3 Query: 163 RPTCVLGATGRI-HSCRTQSLGRAGSSTPLAVAMTGVGEDEQ 41 +P C++G+T R H C Q + GS L +A+ G DE+ Sbjct: 317 QPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEE 358
>PHYB1_LYCES (Q9ZS62) Phytochrome B1| Length = 1131 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -3 Query: 163 RPTCVLGATGRI-HSCRTQSLGRAGSSTPLAVAMTGVGEDEQ 41 +P C++G+T R H C Q + GS L +A+ G DE+ Sbjct: 319 QPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEE 360
>SORC1_HUMAN (Q8WY21) VPS10 domain-containing receptor SorCS1 precursor (hSorCS)| Length = 1168 Score = 30.4 bits (67), Expect = 4.2 Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 9/120 (7%) Frame = +2 Query: 5 ARGASPLCGHGALLIFTDAGHCHGQGRARAGPPQALGPT*MDAPRRTEHAGRPGVVNGGP 184 AR ++ L G G LLI G C G G P + P PR H GRPG P Sbjct: 12 ARLSALLAGAG-LLILCAPGVCGG-GSCCPSPHPSSAPRSASTPRGFSHQGRPGRAPATP 69 Query: 185 RHRQSSPESTAA---------LARHASGRRTKALRAGPTRQLERERESQPARWISGRAPR 337 P + A AR A R+G R+ ++E + R+PR Sbjct: 70 LPLVVRPLFSVAPGDRALSLERARGTGASMAVAARSGRRRRSGADQEKAERGEGASRSPR 129
>AGO1_ARATH (O04379) Argonaute protein| Length = 1048 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/44 (43%), Positives = 20/44 (45%) Frame = +2 Query: 77 QGRARAGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPE 208 QGR R GPP G R GR G + GP RQS PE Sbjct: 81 QGRGRGGPPHQGG-------RGGYGGGRGGGPSSGPPQRQSVPE 117
>KI3L1_HUMAN (P43629) Killer cell immunoglobulin-like receptor 3DL1 precursor| (MHC class I NK cell receptor) (Natural killer-associated transcript 3) (NKAT-3) (p70 natural killer cell receptor clones CL-2/CL-11) (HLA-BW4-specific inhibitory NK cell recept Length = 444 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +3 Query: 135 PVAPSTQVGRAS*MVALVTGNHRRSPLLPWPGTRAGGGRR 254 P +P+ ++ +V +VTGNHR+ LL PG G R Sbjct: 100 PHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGER 139
>SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing| factor SRP20) (X16 protein) Length = 164 Score = 30.0 bits (66), Expect = 5.4 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 1/97 (1%) Frame = +2 Query: 71 HGQGRAR-AGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPESTAALARHASGRR 247 +G+ R+R GPP + G D RR R PR R S + +L+R RR Sbjct: 82 NGEKRSRNRGPPPSWGRRPRDDYRRRSPPPR----RRSPRRRSFSRSRSRSLSRD---RR 134 Query: 248 TKALRAGPTRQLERERESQPARWISGRAPRAFSSSRR 358 + R L RER +P+R S R+ S+ R+ Sbjct: 135 RE-------RSLSRERNHKPSRSFSRSRSRSRSNERK 164
>SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing| factor SRP20) Length = 164 Score = 30.0 bits (66), Expect = 5.4 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 1/97 (1%) Frame = +2 Query: 71 HGQGRAR-AGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPESTAALARHASGRR 247 +G+ R+R GPP + G D RR R PR R S + +L+R RR Sbjct: 82 NGEKRSRNRGPPPSWGRRPRDDYRRRSPPPR----RRSPRRRSFSRSRSRSLSRD---RR 134 Query: 248 TKALRAGPTRQLERERESQPARWISGRAPRAFSSSRR 358 + R L RER +P+R S R+ S+ R+ Sbjct: 135 RE-------RSLSRERNHKPSRSFSRSRSRSRSNERK 164
>IAA22_ORYSA (Q69TU6) Auxin-responsive protein IAA22 (Indoleacetic acid-induced| protein 22) Length = 265 Score = 30.0 bits (66), Expect = 5.4 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 216 LPWPGTRAGGGRRPYGQAPRVS*RERERVNP 308 +PW G AG GRRP +VS ER V+P Sbjct: 169 VPWDGREAGSGRRPAAGVDQVS--ERPDVSP 197
>HMGA1_CRIGR (Q9QXP3) High mobility group protein HMG-I/HMG-Y (HMG-I(Y)) (High| mobility group AT-hook protein 1) (High mobility group protein A1) Length = 106 Score = 29.6 bits (65), Expect = 7.1 Identities = 20/81 (24%), Positives = 34/81 (41%) Frame = +2 Query: 56 DAGHCHGQGRARAGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPESTAALARHA 235 D G+GR R PP + G + + + P G P+ ++ + A A Sbjct: 18 DGTEKRGRGRPRKQPPVSPGTALVGSQKEPSEVPTPKRPRGRPKGSKNKGAAKTRKATTA 77 Query: 236 SGRRTKALRAGPTRQLERERE 298 GR+ + G ++LE+E E Sbjct: 78 PGRKPR----GRPKKLEKEEE 94
>POLG_PVMA (Q85197) Genome polyprotein [Contains: P1 proteinase (N-terminal| protein); Helper component proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral gen Length = 3059 Score = 29.6 bits (65), Expect = 7.1 Identities = 12/43 (27%), Positives = 21/43 (48%) Frame = -2 Query: 341 MPWGRVHLSIWRVDSLSLSLADAWGLPVGPXXXXXXRAWPRQQ 213 + W R H I R++++ S+ ++WG P AW +Q Sbjct: 2693 LEWDRSHEPIHRLEAICASMVESWGYPELTHEIRRFYAWVLEQ 2735
>PHY_PINSY (Q41046) Phytochrome| Length = 1131 Score = 29.6 bits (65), Expect = 7.1 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -3 Query: 163 RPTCVLGATGRI-HSCRTQSLGRAGSSTPLAVAMTGVGEDEQGAMS 29 +P C++G+T H C Q + GS L +A+ G D++G S Sbjct: 317 QPLCLVGSTPSAPHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGS 362
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 29.6 bits (65), Expect = 7.1 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +2 Query: 86 ARAGPPQALGPT*MDAPRRTEHAGRPGVVNGGPRHRQSSPESTAALAR 229 A A P ALGP ++ A R + GP RQ + +S A +AR Sbjct: 721 APARAPAALGPACLEEVTAALLALRDAIPGAGPAERQQAADSVALVAR 768
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 29.6 bits (65), Expect = 7.1 Identities = 20/74 (27%), Positives = 30/74 (40%) Frame = +2 Query: 146 EHAGRPGVVNGGPRHRQSSPESTAALARHASGRRTKALRAGPTRQLERERESQPARWISG 325 E GR G GG R R SP + R++ R + R+ R+R P R + Sbjct: 103 ERGGRGG---GGGRRRSRSPRRRSRSPRYSRSRSPRRSRSRTRSPPSRDRRDSPDRRDNS 159 Query: 326 RAPRAFSSSRREGA 367 R+ R +G+ Sbjct: 160 RSRSRSPPPREDGS 173
>ERR1_HUMAN (P11474) Steroid hormone receptor ERR1 (Estrogen-related receptor,| alpha) (ERR-alpha) (Estrogen receptor-like 1) Length = 519 Score = 29.3 bits (64), Expect = 9.3 Identities = 22/80 (27%), Positives = 30/80 (37%) Frame = +2 Query: 161 PGVVNGGPRHRQSSPESTAALARHASGRRTKALRAGPTRQLERERESQPARWISGRAPRA 340 PG ++G P+S R T + RA P+ R ++P P A Sbjct: 11 PGSLDGRAWEDAQKPQSAWCGGRKTRVYATSSRRAPPSEGTRRGGAARPEEAAEEGPPAA 70 Query: 341 FSSSRREGAFFPNARLAALP 400 S R G P+A ALP Sbjct: 71 PGSLRHSGPLGPHACPTALP 90
>PLDP2_ARATH (Q9M9W8) Phospholipase D p2 (EC 3.1.4.4) (AtPLDp2) (Phospholipase| D2 PHOX and PX containing domain) (Phospholipase D zeta 2) (PLDzeta2) Length = 1046 Score = 29.3 bits (64), Expect = 9.3 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2 Query: 410 PGPWAEQLVAHLGRMRLPAEKTKMPWGRVHLSIW 309 P W E + L R + P +MPW VH ++W Sbjct: 528 PNSWEETMKDELDRRKYP----RMPWHDVHCALW 557 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,370,738 Number of Sequences: 219361 Number of extensions: 2406716 Number of successful extensions: 6671 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 6284 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6662 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
