Clone Name | basd3l05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MOAA_CORGL (Q8NR60) Molybdenum cofactor biosynthesis protein A | 33 | 0.33 | 2 | CO3_HUMAN (P01024) Complement C3 precursor [Contains: Complement... | 30 | 3.6 | 3 | COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment) | 29 | 6.2 | 4 | CO3_ONCMY (P98093) Complement C3-1 [Contains: Complement C3 beta... | 29 | 8.1 |
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>MOAA_CORGL (Q8NR60) Molybdenum cofactor biosynthesis protein A| Length = 377 Score = 33.5 bits (75), Expect = 0.33 Identities = 21/52 (40%), Positives = 27/52 (51%) Frame = +2 Query: 323 LPTEDLDALVSVTTNDDLGHLLEEYDAASRDRLQPLKIRGVPVPKGQNAADL 478 L T D + VS+T D L +L DAA L P+KI V +P G N D+ Sbjct: 165 LDTIDAERYVSLTRRDRLSGVLASIDAAVAAGLHPVKINAVVMP-GVNEVDI 215
>CO3_HUMAN (P01024) Complement C3 precursor [Contains: Complement C3 beta chain;| Complement C3 alpha chain; C3a anaphylatoxin; Complement C3b alpha' chain; Complement C3c fragment; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment Length = 1663 Score = 30.0 bits (66), Expect = 3.6 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 6/100 (6%) Frame = +2 Query: 221 NNRVLSVDRSLQFHELQRKLTDMCGWEAMSLRCQLPTEDLDALVSVTTNDDLGHL--LEE 394 +++ L++D SLQ K+T WE+ SL T++ + G L + Sbjct: 1288 DHQELNLDVSLQLPSRSSKITHRIHWESASLLRSEETKENEGFTVTAEGKGQGTLSVVTM 1347 Query: 395 YDAASRDRLQ----PLKIRGVPVPKGQNAADLAAHPVVLQ 502 Y A ++D+L LK+ P P+ + A + ++L+ Sbjct: 1348 YHAKAKDQLTCNKFDLKVTIKPAPETEKRPQDAKNTMILE 1387
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 29.3 bits (64), Expect = 6.2 Identities = 16/59 (27%), Positives = 25/59 (42%) Frame = +2 Query: 194 DGALRYVGGNNRVLSVDRSLQFHELQRKLTDMCGWEAMSLRCQLPTEDLDALVSVTTND 370 D ALR++G N+ +S D + L G+E + P D ++ V ND Sbjct: 405 DKALRFLGSNDEEMSYDNNPHIKALYDGCASRKGYEKTVIEINTPKIDQVPIIDVMIND 463
>CO3_ONCMY (P98093) Complement C3-1 [Contains: Complement C3 beta chain;| Complement C3 alpha chain; C3a anaphylatoxin; Complement C3b alpha' chain; Complement C3c fragment; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Comple Length = 1640 Score = 28.9 bits (63), Expect = 8.1 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = +2 Query: 314 RCQLPTEDLDALVSVTTNDDLGHLLEEYDAASRDRLQPLKIRGVPVPKGQNAADLAAHPV 493 R Q+P D D L+SVT + L+E+ A S D L L ++ PV G+ PV Sbjct: 945 RNQVPNSDADTLISVTAGEQTSVLVEQ--AISGDSLGSLIVQ--PVGCGEQNMIYMTLPV 1000 Query: 494 V 496 + Sbjct: 1001 I 1001 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,760,680 Number of Sequences: 219361 Number of extensions: 729855 Number of successful extensions: 2025 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1970 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2023 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)