Clone Name | basd3k22 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 Score = 541 bits (273), Expect = e-151 Identities = 378/413 (91%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctctacca 65 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| ||| Sbjct: 8 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctccaccg 67 Query: 66 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 125 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 68 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 127 Query: 126 ggaacggcagaatcacctgcatgacgttcccacgggactggctgcggagggacctgaacg 185 |||||||||| ||||||||||||||||| || | ||||||||| ||||||||||||||| Sbjct: 128 ggaacggcaggatcacctgcatgacgtttccgcaggactggcttaggagggacctgaacg 187 Query: 186 tgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggca 245 |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 188 tgatcgggttcgggctgatcgggtggatcgcgccgtcgagcgtcccggcgatcaacggca 247 Query: 246 acagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcgc 305 ||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 248 acagcctcacggggctcttcttctccagcatcggccaggagctctcccacttcccctcgc 307 Query: 306 ccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttca 365 | ||||| ||| | |||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 308 cgccggcgctcgactcgccgttctggctgtggttggtgacgtggcaccttgggctgttcc 367 Query: 366 tcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 368 tggcgctcaccttcggccagatcgggttcaagggcaggaccgagggctacttc 420
>dbj|AK059990.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A12, full insert sequence Length = 1192 Score = 541 bits (273), Expect = e-151 Identities = 378/413 (91%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctctacca 65 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| ||| Sbjct: 605 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctccaccg 664 Query: 66 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 125 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 665 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 724 Query: 126 ggaacggcagaatcacctgcatgacgttcccacgggactggctgcggagggacctgaacg 185 |||||||||| ||||||||||||||||| || | ||||||||| ||||||||||||||| Sbjct: 725 ggaacggcaggatcacctgcatgacgtttccgcaggactggcttaggagggacctgaacg 784 Query: 186 tgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggca 245 |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 785 tgatcgggttcgggctgatcgggtggatcgcgccgtcgagcgtcccggcgatcaacggca 844 Query: 246 acagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcgc 305 ||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 845 acagcctcacggggctcttcttctccagcatcggccaggagctctcccacttcccctcgc 904 Query: 306 ccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttca 365 | ||||| ||| | |||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 905 cgccggcgctcgactcgccgttctggctgtggttggtgacgtggcaccttgggctgttcc 964 Query: 366 tcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 965 tggcgctcaccttcggccagatcgggttcaagggcaggaccgagggctacttc 1017
>dbj|AK058848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-G12, full insert sequence Length = 645 Score = 541 bits (273), Expect = e-151 Identities = 378/413 (91%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctctacca 65 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| ||| Sbjct: 77 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctccaccg 136 Query: 66 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 125 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 137 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 196 Query: 126 ggaacggcagaatcacctgcatgacgttcccacgggactggctgcggagggacctgaacg 185 |||||||||| ||||||||||||||||| || | ||||||||| ||||||||||||||| Sbjct: 197 ggaacggcaggatcacctgcatgacgtttccgcaggactggcttaggagggacctgaacg 256 Query: 186 tgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggca 245 |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 257 tgatcgggttcgggctgatcgggtggatcgcgccgtcgagcgtcccggcgatcaacggca 316 Query: 246 acagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcgc 305 ||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 317 acagcctcacggggctcttcttctccagcatcggccaggagctctcccacttcccctcgc 376 Query: 306 ccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttca 365 | ||||| ||| | |||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 377 cgccggcgctcgactcgccgttctggctgtggttggtgacgtggcaccttgggctgttcc 436 Query: 366 tcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 437 tggcgctcaccttcggccagatcgggttcaagggcaggaccgagggctacttc 489
>gb|AY105449.1| Zea mays PCO139896 mRNA sequence Length = 911 Score = 444 bits (224), Expect = e-121 Identities = 371/420 (88%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctctacca 65 |||||||||||| |||||||||||||||| | || ||| |||| || || ||||| |||| Sbjct: 290 cctccaccgtctccggcctcgccggcgcctccctggccagccgcccggcgttctccacca 349 Query: 66 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 125 |||||||| | ||| |||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 350 gcttcacgcggggcagccgggtgtcggcgaggaaccccctgatgagcaggaacctggaga 409 Query: 126 ggaacggcagaatcacctgcatgacgttcccacgggactggctgcggagggacctgaacg 185 |||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||| || Sbjct: 410 ggaatggcaggatcacctgcatgacgtttccccgggactggctgcggagggacctgagcg 469 Query: 186 tgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggca 245 | ||||| |||||||| ||||| ||| ||| |||||| ||| ||||| |||||||||| Sbjct: 470 tcatcggcttcgggctcatcggctggatggggccgtccagcgtcccggccatcaacggca 529 Query: 246 acagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcgc 305 ||||| | ||||||||||||||||||||||||||| ||||||| |||||||||||| ||| Sbjct: 530 acagcctcacggggctcttcttctccagcatcggccaggagctggcccacttccccacgc 589 Query: 306 ccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttca 365 ||||| | || || ||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 590 ccccgcccgtcacctcccagttctggctgtggctagtgacgtggcacctgggcctgttca 649 Query: 366 tcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttccagaagt 425 ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 650 tcgtgctcaccttcggccagatcggattcaagggcaggaccgaggactacttcgagaagt 709
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 214 bits (108), Expect = 2e-52 Identities = 156/172 (90%) Strand = Plus / Plus Query: 160 ggactggctgcggagggacctgaacgtgatcgggttcgggctgatcgggtggctggcgcc 219 ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 16100 ggactggcttaggagggacctgaacgtgatcgggttcgggctgatcgggtggatcgcgcc 16159 Query: 220 gtcgagcatcccgctgatcaacggcaacagcttgacggggctcttcttctccagcatcgg 279 ||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 16160 gtcgagcgtcccggcgatcaacggcaacagcctcacggggctcttcttctccagcatcgg 16219 Query: 280 cgaggagctcgcccacttcccctcgcccccggctctccagtcgcagttctgg 331 | |||||||| |||||||||||||||| ||||| ||| | |||| ||||||| Sbjct: 16220 ccaggagctctcccacttcccctcgccgccggcgctcgactcgccgttctgg 16271 Score = 137 bits (69), Expect = 4e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 330 ggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggccagatcg 389 ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||| Sbjct: 16386 ggctgtggttggtgacgtggcaccttgggctgttcctggcgctcaccttcggccagatcg 16445 Query: 390 ggttcaagggcaggaccgaggactacttc 418 ||||||||||||||||||||| ||||||| Sbjct: 16446 ggttcaagggcaggaccgagggctacttc 16474 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 66 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 125 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 15898 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 15957 Query: 126 ggaacggcagaatcacctgcatgacgt 152 |||||||||| |||||||||||||||| Sbjct: 15958 ggaacggcaggatcacctgcatgacgt 15984 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctc 60 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| Sbjct: 15751 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctc 15805
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 214 bits (108), Expect = 2e-52 Identities = 156/172 (90%) Strand = Plus / Plus Query: 160 ggactggctgcggagggacctgaacgtgatcgggttcgggctgatcgggtggctggcgcc 219 ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 20505472 ggactggcttaggagggacctgaacgtgatcgggttcgggctgatcgggtggatcgcgcc 20505531 Query: 220 gtcgagcatcccgctgatcaacggcaacagcttgacggggctcttcttctccagcatcgg 279 ||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 20505532 gtcgagcgtcccggcgatcaacggcaacagcctcacggggctcttcttctccagcatcgg 20505591 Query: 280 cgaggagctcgcccacttcccctcgcccccggctctccagtcgcagttctgg 331 | |||||||| |||||||||||||||| ||||| ||| | |||| ||||||| Sbjct: 20505592 ccaggagctctcccacttcccctcgccgccggcgctcgactcgccgttctgg 20505643 Score = 137 bits (69), Expect = 4e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 330 ggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggccagatcg 389 ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||| Sbjct: 20505758 ggctgtggttggtgacgtggcaccttgggctgttcctggcgctcaccttcggccagatcg 20505817 Query: 390 ggttcaagggcaggaccgaggactacttc 418 ||||||||||||||||||||| ||||||| Sbjct: 20505818 ggttcaagggcaggaccgagggctacttc 20505846 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 66 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 125 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 20505270 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 20505329 Query: 126 ggaacggcagaatcacctgcatgacgt 152 |||||||||| |||||||||||||||| Sbjct: 20505330 ggaacggcaggatcacctgcatgacgt 20505356 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctc 60 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| Sbjct: 20505123 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctc 20505177
>gb|AY087368.1| Arabidopsis thaliana clone 34623 mRNA, complete sequence Length = 598 Score = 77.8 bits (39), Expect = 3e-11 Identities = 189/239 (79%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 271 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 330 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 331 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 390 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 391 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 450 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| ||||| |||||| Sbjct: 451 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaggattacttc 509
>ref|NM_100711.2| Arabidopsis thaliana unknown protein AT1G08380 mRNA, complete cds Length = 655 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 271 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 330 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 331 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 390 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 391 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 450 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 451 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 509
>gb|BT000191.1| Arabidopsis thaliana expressed protein (At1g08380) mRNA, complete cds Length = 474 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 182 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 241 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 242 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 301 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 302 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 361 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 362 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 420
>gb|AY091345.1| Arabidopsis thaliana unknown protein (At1g08380) mRNA, complete cds Length = 454 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 182 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 241 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 242 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 301 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 302 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 361 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 362 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 420
>gb|AY050960.1| Arabidopsis thaliana unknown protein (At1g08380) mRNA, complete cds Length = 550 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 206 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 265 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 266 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 325 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 326 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 385 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 386 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 444
>gb|AY136345.1| Arabidopsis thaliana expressed protein (At1g08380) mRNA, complete cds Length = 534 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 206 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 265 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 266 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 325 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 326 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 385 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 386 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 444
>emb|BX818101.1|CNS0ADVW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 540 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 212 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 271 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 272 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 331 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 332 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 391 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 392 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 450
>emb|BX814418.1|CNS0AAQN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 522 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 194 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 253 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 254 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 313 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 314 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 373 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 374 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 432
>emb|BX841789.1|CNS09Y7L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 508 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 189 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 248 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 249 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 308 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 309 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 368 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 369 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 427
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Minus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 22079 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 22020 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 22019 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 21960 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 21959 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 21900 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 21899 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 21841
>emb|AJ493060.1|ATH493060 Arabidopsis thaliana mRNA for photosystem I subunit O (psaO gene) Length = 558 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 213 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 272 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 273 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 332 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 333 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 392 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 393 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 451
>emb|BX818690.1|CNS0ACKT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 527 Score = 67.9 bits (34), Expect = 3e-08 Identities = 178/226 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 187 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 246 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 247 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 306 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 307 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 366 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggac 405 | ||| || ||||| ||||| || ||||| |||||||||||||| Sbjct: 367 tcttcctctgcctcactttcggacaaatcggattcaagggcaggac 412
>emb|BX814042.1|CNS0ADIH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB53ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 541 Score = 61.9 bits (31), Expect = 2e-06 Identities = 187/239 (78%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 239 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 213 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 272 Query: 240 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 299 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 273 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 332 Query: 300 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 359 | | || || |||||| || ||||||||| |||||||||| ||||||||| || | Sbjct: 333 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcactaaggcc 392 Query: 360 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 393 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 451
>emb|BX814740.1|CNS0ADI3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 531 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 323 cagttctggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggc 382 ||||||||| |||||||||| ||||||||| || || ||| || | ||||| ||||| Sbjct: 348 cagttctggttgtggttggttacgtggcactgaggcctcttcctctccctcactttcgga 407 Query: 383 cagatcgggttcaagggcaggaccgaggactacttc 418 || ||||| |||||||||||||| || || |||||| Sbjct: 408 caaatcggattcaagggcaggactgaagattacttc 443 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcat 228 |||||||| | || || ||||||||||| ||||| || ||||||||||| Sbjct: 205 tgaacgtggtaggatttgggctgatcggatggctcgctccgtcgagcat 253
>gb|DQ099068.1| Arachis stenosperma clone AS2ML1G04 microsatellite sequence Length = 322 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 323 cagttctggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggc 382 ||||| ||| ||||| |||| |||||||||||||| || ||| || |||||||| ||| Sbjct: 108 cagttttggttgtggctggttacgtggcacctgggcctcttcctctgcctcacctttggc 167 Query: 383 cagatcgggttcaagggcaggaccgaggactactt 417 || || || |||||||| ||||| || |||||||| Sbjct: 168 caaattggattcaagggaaggactgaagactactt 202
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ctcgccggcgccgcactcgcccgccg 48 ||||||| |||||||||||||||||| Sbjct: 6021608 ctcgccgccgccgcactcgcccgccg 6021633 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 21136123 gcatcggcgaggagctcgcc 21136104
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 caccgtctacggcctcgccggcgccg 35 |||||||||||| ||||||||||||| Sbjct: 8290558 caccgtctacgggctcgccggcgccg 8290533
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 tctacggcctcgccggcgccgc 36 |||||||||||||||||||||| Sbjct: 5005353 tctacggcctcgccggcgccgc 5005332
>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644A02 Length = 144954 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ctcgccggcgccgcactcgcccgccg 48 ||||||| |||||||||||||||||| Sbjct: 26107 ctcgccgccgccgcactcgcccgccg 26132
>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence Length = 42022 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 cgccggcgccgcactcgcccgccgg 49 |||||||||||||| |||||||||| Sbjct: 34149 cgccggcgccgcacccgcccgccgg 34173
>emb|BX813728.1|CNS0ADHP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 485 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 180 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcat 228 |||||||| | || || ||||||||||| ||||| || ||||||||||| Sbjct: 164 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcat 212 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 371 ctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 418 ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 355 ctcactttcggacaaatcggattcaagggcaggactgaagattacttc 402
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 185 gtgatcgggttcgggctgatcgggtggct 213 ||||||||||||||| ||||||| ||||| Sbjct: 235 gtgatcgggttcgggttgatcggatggct 207
>ref|XM_549878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 483 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcg 41 |||||||||||| || ||||||||||| ||| |||| Sbjct: 95 cctccaccgtctccgacctcgccggcgtcgcgctcg 130
>ref|NM_188440.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 1109 gcatcggcgaggagctcgcc 1128
>ref|XM_475953.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 1148 gcatcggcgaggagctcgcc 1167
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cggcagaatcacctgcatga 149 |||||||||||||||||||| Sbjct: 1212241 cggcagaatcacctgcatga 1212260
>gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, complete sequence Length = 202156 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tgtgttcaatgtaaaatctgtcat 519 |||||||||||||||||| ||||| Sbjct: 116167 tgtgttcaatgtaaaatcggtcat 116190
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 103728 gcatcggcgaggagctcgcc 103747
>gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome 6, complete sequence Length = 222892 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 115 gaacctggagaggaacggcagaatcacc 142 |||| ||||||||||||| ||||||||| Sbjct: 185827 gaacatggagaggaacgggagaatcacc 185854
>gb|AC021744.14| Homo sapiens chromosome 8, clone RP11-284H18, complete sequence Length = 175636 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cccacttcccctcgcccccggctc 314 ||||| |||||||||||||||||| Sbjct: 4463 cccacatcccctcgcccccggctc 4486
>emb|AL353894.14| Human DNA sequence from clone RP11-452O22 on chromosome 1q21.1-22 Contains the OR10Z1 gene for olfactory receptor, family 10, subfamily Z, member 1, the SPTA1 gene for spectrin, alpha, erythrocytic 1 (elliptocytosis 2) and the OR6K1P olfactory receptor, family 6, subfamily K, member 1 pseudogene, complete sequence Length = 112670 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cttttggatcatgcatgtgc 459 |||||||||||||||||||| Sbjct: 50150 cttttggatcatgcatgtgc 50131
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 tcgcgctcaccttcggccagatcg 389 ||||||||||||||||||| |||| Sbjct: 1816 tcgcgctcaccttcggccacatcg 1839
>gb|AC144342.26| Medicago truncatula clone mth2-10n2, complete sequence Length = 145497 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 catgtgtgttcaatgtaaaa 511 |||||||||||||||||||| Sbjct: 141224 catgtgtgttcaatgtaaaa 141243
>gb|AE009904.1|AE009904 Pyrobaculum aerophilum strain IM2 section 159 of 201 of the complete genome Length = 11414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cggcgaggagctcgcccact 296 |||||||||||||||||||| Sbjct: 4283 cggcgaggagctcgcccact 4302
>gb|AC158664.5| Mus musculus 6 BAC RP23-24F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232894 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 115 gaacctggagaggaacggcagaatcacc 142 |||| ||||||||||||| ||||||||| Sbjct: 48904 gaacatggagaggaacgggagaatcacc 48931
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 363 tcatcgcgctcaccttcggccagatcgg 390 ||||||||||||||||||| ||| |||| Sbjct: 19205267 tcatcgcgctcaccttcggtcagctcgg 19205240
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 28785015 gcatcggcgaggagctcgcc 28785034
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 6296153 gcatcggcgaggagctcgcc 6296172 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcg 41 |||||||||||| || ||||||||||| ||| |||| Sbjct: 585057 cctccaccgtctccgacctcgccggcgtcgcgctcg 585092
>gb|AE004835.1| Pseudomonas aeruginosa PAO1, section 396 of 529 of the complete genome Length = 10876 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 caccgtctacggcctcgccg 29 |||||||||||||||||||| Sbjct: 6019 caccgtctacggcctcgccg 6038
>gb|AE004729.1| Pseudomonas aeruginosa PAO1, section 290 of 529 of the complete genome Length = 12189 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tggcgccgtcgagcatcccg 232 |||||||||||||||||||| Sbjct: 733 tggcgccgtcgagcatcccg 714
>gb|AC021636.16| Homo sapiens chromosome 8, clone RP11-637F16, complete sequence Length = 148687 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 cccacttcccctcgcccccggctc 314 ||||| |||||||||||||||||| Sbjct: 11990 cccacatcccctcgcccccggctc 11967
>ref|NM_001014853.1| Bos taurus hypothetical protein LOC505393 (LOC505393), mRNA Length = 2632 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ggggctcttcttctccagca 275 |||||||||||||||||||| Sbjct: 1096 ggggctcttcttctccagca 1077
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 158351 gcatcggcgaggagctcgcc 158370
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 67219 gcatcggcgaggagctcgcc 67238
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 gccgtcgagcatcccgctga 236 |||||||||||||||||||| Sbjct: 5348399 gccgtcgagcatcccgctga 5348380
>dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456F09 Length = 141336 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 34784 gcatcggcgaggagctcgcc 34765
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 133124 gcatcggcgaggagctcgcc 133105
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 6 cctccaccgtctacggcctcgccggcgccgcactcg 41 |||||||||||| || ||||||||||| ||| |||| Sbjct: 59662 cctccaccgtctccgacctcgccggcgtcgcgctcg 59697
>gb|AE005009.1| Halobacterium sp. NRC-1 section 40 of 170 of the complete genome Length = 10525 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 2223 gcatcggcgaggagctcgcc 2204
>gb|BT021733.1| Bos taurus hypothetical protein FLJ12770 (FLJ12770), mRNA, complete cds Length = 2632 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ggggctcttcttctccagca 275 |||||||||||||||||||| Sbjct: 1096 ggggctcttcttctccagca 1077
>dbj|AK106219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H06, full insert sequence Length = 1626 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 363 tcatcgcgctcaccttcggccagatcgg 390 ||||||||||||||||||| ||| |||| Sbjct: 250 tcatcgcgctcaccttcggtcagctcgg 277
>dbj|AK105906.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G02, full insert sequence Length = 1482 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 1182 gcatcggcgaggagctcgcc 1201
>dbj|AK073792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068M22, full insert sequence Length = 1745 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 363 tcatcgcgctcaccttcggccagatcgg 390 ||||||||||||||||||| ||| |||| Sbjct: 251 tcatcgcgctcaccttcggtcagctcgg 278
>dbj|AK072750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134K21, full insert sequence Length = 2066 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 363 tcatcgcgctcaccttcggccagatcgg 390 ||||||||||||||||||| ||| |||| Sbjct: 627 tcatcgcgctcaccttcggtcagctcgg 654
>dbj|AK069785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H02, full insert sequence Length = 1705 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 1218 gcatcggcgaggagctcgcc 1237
>dbj|AK058620.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B07, full insert sequence Length = 1587 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 363 tcatcgcgctcaccttcggccagatcgg 390 ||||||||||||||||||| ||| |||| Sbjct: 209 tcatcgcgctcaccttcggtcagctcgg 236
>emb|CT009690.15| Pig DNA sequence from clone CH242-207C21 on chromosome 7, complete sequence Length = 94949 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 cgcccacttcccctcgcccccggc 312 ||||||||||||||| |||||||| Sbjct: 49249 cgcccacttcccctcccccccggc 49272
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 363 tcatcgcgctcaccttcggccagatcgg 390 ||||||||||||||||||| ||| |||| Sbjct: 19131494 tcatcgcgctcaccttcggtcagctcgg 19131467
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 363 tcatcgcgctcaccttcggccagatcgg 390 ||||||||||||||||||| ||| |||| Sbjct: 20714 tcatcgcgctcaccttcggtcagctcgg 20741
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136155 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 363 tcatcgcgctcaccttcggccagatcgg 390 ||||||||||||||||||| ||| |||| Sbjct: 38597 tcatcgcgctcaccttcggtcagctcgg 38570
>gb|L36050.1|RABMMPN Oryctolagus cuniculus matrix metalloproteinase (MMP9) gene, exons 1-3 Length = 1862 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 ctcgcccgccggccagccttctct 61 |||||| ||||||||||||||||| Sbjct: 729 ctcgccagccggccagccttctct 706
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcatcggcgaggagctcgcc 292 |||||||||||||||||||| Sbjct: 88452 gcatcggcgaggagctcgcc 88433
>dbj|AP002533.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 2/4 Length = 300000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cttttggatcatgcatgtgc 459 |||||||||||||||||||| Sbjct: 158978 cttttggatcatgcatgtgc 158959
>dbj|AB045360.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:987d5, complete sequence Length = 163186 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cttttggatcatgcatgtgc 459 |||||||||||||||||||| Sbjct: 69263 cttttggatcatgcatgtgc 69244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,658,868 Number of Sequences: 3902068 Number of extensions: 3658868 Number of successful extensions: 79141 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78401 Number of HSP's gapped (non-prelim): 728 length of query: 542 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 519 effective length of database: 17,143,297,704 effective search space: 8897371508376 effective search space used: 8897371508376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)