ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3n02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464101.1| Oryza sativa (japonica cultivar-group), mRNA 80 9e-12
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
3dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
4ref|XM_633242.1| Dictyostelium discoideum hypothetical protein (... 46 0.13
5gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cance... 44 0.52
6gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complet... 44 0.52
7emb|AL929257.9| Mouse DNA sequence from clone RP23-75A23 on chro... 44 0.52
8gb|AC147086.3| Pan troglodytes BAC clone RP43-58O23 from 7, comp... 42 2.0
9gb|AC099551.2| Homo sapiens BAC clone RP11-685O3 from 7, complet... 42 2.0
10emb|AL590135.5| Human DNA sequence from clone RP11-307O1 on chro... 42 2.0
11emb|AL353611.19| Human DNA sequence from clone RP11-447M12 on ch... 42 2.0
12gb|AC131205.3| Homo sapiens 12 BAC RP11-185H22 (Roswell Park Can... 42 2.0
13emb|AL603662.11| Mouse DNA sequence from clone RP23-396M19 on ch... 42 2.0
14gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
15gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.0
16ref|XM_396531.2| PREDICTED: Apis mellifera similar to ENSANGP000... 42 2.0
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
18gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, comple... 42 2.0
19ref|XM_311308.2| Anopheles gambiae str. PEST ENSANGP00000017680 ... 42 2.0
20gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
21emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chro... 42 2.0
22emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chro... 42 2.0
23emb|AL671867.8| Mouse DNA sequence from clone RP23-131J17 on chr... 42 2.0
24ref|XM_629930.1| Dictyostelium discoideum hypothetical protein (... 40 8.1
25gb|AC161342.10| Mus musculus chromosome 1, clone RP23-313K17, co... 40 8.1
26gb|AC145508.3| Dasypus novemcinctus clone VMRC5-464O17, complete... 40 8.1
27ref|NG_002432.1| Homo sapiens major histocompatibility complex, ... 40 8.1
28gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, comp... 40 8.1
29gb|AC002433.2| Homo sapiens BAC clone CTA-317M2 from 7, complete... 40 8.1
30emb|CR450852.9| Zebrafish DNA sequence from clone DKEY-67C24 in ... 40 8.1
31gb|AC146510.3| Pan troglodytes BAC clone RP43-64B24 from 7, comp... 40 8.1
32gb|AC124694.3| Mus musculus BAC clone RP24-171H8 from chromosome... 40 8.1
33gb|AC002288.1|HUAC002288 Homo sapiens Chromosome 16 BAC clone CI... 40 8.1
34gb|AC083964.3| Homo sapiens chromosome 8, clone RP11-91J19, comp... 40 8.1
35gb|AC130451.2| Homo sapiens chromosome 16 clone CTA-249B10, comp... 40 8.1
36gb|AC124355.3| Mus musculus BAC clone RP24-483G17 from chromosom... 40 8.1
37gb|AC107707.10| Mus musculus chromosome 1, clone RP24-268C13, co... 40 8.1
38gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, comp... 40 8.1
39gb|AC146549.8| Medicago truncatula clone mth2-7p18, complete seq... 40 8.1
40emb|AL713966.7| Human DNA sequence from clone XXbac-161M6 on chr... 40 8.1
41emb|AL445984.6| Human DNA sequence from clone RP11-360A9 on chro... 40 8.1
42emb|AL359920.15| Human DNA sequence from clone RP11-359P14 on ch... 40 8.1
43emb|AL353148.8| Human DNA sequence from clone RP11-298H24 on chr... 40 8.1
44emb|CR857614.1| Pongo pygmaeus mRNA; cDNA DKFZp459O2030 (from cl... 40 8.1
45gb|AC079075.6| Homo sapiens chromosome 15, clone RP11-300G22, co... 40 8.1
46gb|AC013787.15| Homo sapiens chromosome 15, clone RP11-531E13, c... 40 8.1
47gb|AC091206.3| Drosophila melanogaster 3L BAC RP98-19M9 (Roswell... 40 8.1
48gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswel... 40 8.1
49dbj|AK074938.1| Homo sapiens cDNA FLJ90457 fis, clone NT2RP30016... 40 8.1
50dbj|AP007215.1| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 8.1
51ref|NM_206266.1| Drosophila melanogaster karst CG12008-RB, trans... 40 8.1
52ref|NM_206265.1| Drosophila melanogaster karst CG12008-RC, trans... 40 8.1
53dbj|AB034628.1| Equus caballus microsatellite TKY319, TKY320 DNA 40 8.1
54ref|NM_079176.1| Drosophila melanogaster karst CG12008-RA, trans... 40 8.1
55gb|AC093900.3| Homo sapiens BAC clone RP11-730E1 from 4, complet... 40 8.1
56gb|AC068234.8| Homo sapiens chromosome 17, clone RP11-290H9, com... 40 8.1
57gb|AC034205.4| Homo sapiens chromosome 5 clone CTB-23I7, complet... 40 8.1
58gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 8.1
59gb|AC008562.5| Homo sapiens chromosome 5 clone CTC-535M15, compl... 40 8.1
60gb|AC153362.4| Mus musculus BAC clone RP23-92N20 from chromosome... 40 8.1
61dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
62dbj|AP006345.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.1
63gb|AC154524.2| Mus musculus BAC clone RP24-68D23 from chromosome... 40 8.1
64gb|AC078920.17| Homo sapiens 12 BAC RP11-121G22 (Roswell Park Ca... 40 8.1
65gb|AF330194.1| Pythium torulosum internal transcribed spacer 1, ... 40 8.1
66gb|AF265340.1|AF265340 Homo sapiens chromosome 16 clone BAC 504N... 40 8.1
67ref|NM_024560.2| Homo sapiens FLJ21963 protein (FLJ21963), mRNA 40 8.1
68dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
69dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
70dbj|AK074267.1| Homo sapiens cDNA FLJ23687 fis, clone HEP10109 40 8.1
71dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
72emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 ... 40 8.1
73gb|AC147513.16| Mus musculus chromosome 1, clone RP23-105K16, co... 40 8.1
74gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11... 40 8.1
75gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 8.1
76gb|AC120425.12| Mus musculus chromosome 14, clone RP24-510K2, co... 40 8.1
77dbj|AP006240.1| Homo sapiens genomic DNA, chromosome 3, clone:RP... 40 8.1
78gb|AC132321.2| Mus musculus BAC clone RP24-261H23 from 8, comple... 40 8.1
79gb|AF022656.1|AF022656 Drosophila melanogaster beta-H spectrin (... 40 8.1
80emb|AL662809.14| Mouse DNA sequence from clone RP23-441I8 on chr... 40 8.1
81emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on ch... 40 8.1
82gb|AC142105.7| Mus musculus BAC clone RP24-240E7 from chromosome... 40 8.1
83emb|AL671914.9| Mouse DNA sequence from clone RP23-1A3 on chromo... 40 8.1
84gb|AC090135.13| Homo sapiens chromosome 8, clone RP11-18D5, comp... 40 8.1
85dbj|AP000494.1| Homo sapiens genomic DNA, chromosome 3p21.3, clo... 40 8.1
86dbj|AP004370.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.1
87dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.1
88dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response fac... 40 8.1 
>ref|XM_464101.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3420

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 136/168 (80%)
 Strand = Plus / Plus

                                                                        
Query: 6    cttgcaaggcagttatatatgcagaaccatatactacaacagaatagcatgcagtttaat 65
            |||||||||||  ||||| | |||||| || | || ||||||||  |||| |||||||||
Sbjct: 1423 cttgcaaggcaactatatgtccagaacaatctccttcaacagaactgcatacagtttaat 1482

                                                                        
Query: 66   cctcccaagctccatcagcaaatgaaacctattaatgatttgtcaaatgcagcacttcca 125
             |||||||||||| |||||||||| || | || || ||| |||| || || ||| |||| 
Sbjct: 1483 tctcccaagctccctcagcaaatgcaaaccatgaacgatctgtccaaggcggcaattccg 1542

                                                            
Query: 126  ttgaatcaactaggtgccatcagaaatcaccaagatcagaagcaagat 173
            |||||||| || ||||| ||||  ||||  ||||||||||| ||||||
Sbjct: 1543 ttgaatcagcttggtgctatcatcaatcctcaagatcagaaacaagat 1590



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 56/62 (90%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                        
Query: 531  atgcaacagcagttgtcgaattcacatttcacttgcccaacaacaagtgatgccccaaca 590
            |||||| |||||||||| |||||||||| ||||||| || |||||| |||||||||||||
Sbjct: 2041 atgcaaaagcagttgtcaaattcacatt-cacttgctcagcaacaaatgatgccccaaca 2099

              
Query: 591  ag 592
            ||
Sbjct: 2100 ag 2101



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                        
Query: 379  aatctggcaagtcagcaaacacaactgtctgatcaggaactccacttgcagctgttacag 438
            |||||||||||||||||  |  |  ||| |||| |||| || || |||||| | ||||||
Sbjct: 1891 aatctggcaagtcagcagtctaagttgtttgatgaggagcttcagttgcagatattacag 1950

                                             
Query: 439  aaactacagcagcagtcactgatgtcacaatcc 471
            ||||| |||||||| ||||||||||||||||||
Sbjct: 1951 aaactgcagcagcaatcactgatgtcacaatcc 1983
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 136/168 (80%)
 Strand = Plus / Minus

                                                                           
Query: 6       cttgcaaggcagttatatatgcagaaccatatactacaacagaatagcatgcagtttaat 65
               |||||||||||  ||||| | |||||| || | || ||||||||  |||| |||||||||
Sbjct: 2210379 cttgcaaggcaactatatgtccagaacaatctccttcaacagaactgcatacagtttaat 2210320

                                                                           
Query: 66      cctcccaagctccatcagcaaatgaaacctattaatgatttgtcaaatgcagcacttcca 125
                |||||||||||| |||||||||| || | || || ||| |||| || || ||| |||| 
Sbjct: 2210319 tctcccaagctccctcagcaaatgcaaaccatgaacgatctgtccaaggcggcaattccg 2210260

                                                               
Query: 126     ttgaatcaactaggtgccatcagaaatcaccaagatcagaagcaagat 173
               |||||||| || ||||| ||||  ||||  ||||||||||| ||||||
Sbjct: 2210259 ttgaatcagcttggtgctatcatcaatcctcaagatcagaaacaagat 2210212



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 56/62 (90%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                           
Query: 531     atgcaacagcagttgtcgaattcacatttcacttgcccaacaacaagtgatgccccaaca 590
               |||||| |||||||||| |||||||||| ||||||| || |||||| |||||||||||||
Sbjct: 2209761 atgcaaaagcagttgtcaaattcacatt-cacttgctcagcaacaaatgatgccccaaca 2209703

                 
Query: 591     ag 592
               ||
Sbjct: 2209702 ag 2209701



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                           
Query: 379     aatctggcaagtcagcaaacacaactgtctgatcaggaactccacttgcagctgttacag 438
               |||||||||||||||||  |  |  ||| |||| |||| || || |||||| | ||||||
Sbjct: 2209911 aatctggcaagtcagcagtctaagttgtttgatgaggagcttcagttgcagatattacag 2209852

                                                
Query: 439     aaactacagcagcagtcactgatgtcacaatcc 471
               ||||| |||||||| ||||||||||||||||||
Sbjct: 2209851 aaactgcagcagcaatcactgatgtcacaatcc 2209819
to top
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1679_B08
          Length = 142529

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 136/168 (80%)
 Strand = Plus / Minus

                                                                          
Query: 6      cttgcaaggcagttatatatgcagaaccatatactacaacagaatagcatgcagtttaat 65
              |||||||||||  ||||| | |||||| || | || ||||||||  |||| |||||||||
Sbjct: 125072 cttgcaaggcaactatatgtccagaacaatctccttcaacagaactgcatacagtttaat 125013

                                                                          
Query: 66     cctcccaagctccatcagcaaatgaaacctattaatgatttgtcaaatgcagcacttcca 125
               |||||||||||| |||||||||| || | || || ||| |||| || || ||| |||| 
Sbjct: 125012 tctcccaagctccctcagcaaatgcaaaccatgaacgatctgtccaaggcggcaattccg 124953

                                                              
Query: 126    ttgaatcaactaggtgccatcagaaatcaccaagatcagaagcaagat 173
              |||||||| || ||||| ||||  ||||  ||||||||||| ||||||
Sbjct: 124952 ttgaatcagcttggtgctatcatcaatcctcaagatcagaaacaagat 124905



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 56/62 (90%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                          
Query: 531    atgcaacagcagttgtcgaattcacatttcacttgcccaacaacaagtgatgccccaaca 590
              |||||| |||||||||| |||||||||| ||||||| || |||||| |||||||||||||
Sbjct: 124454 atgcaaaagcagttgtcaaattcacatt-cacttgctcagcaacaaatgatgccccaaca 124396

                
Query: 591    ag 592
              ||
Sbjct: 124395 ag 124394



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                          
Query: 379    aatctggcaagtcagcaaacacaactgtctgatcaggaactccacttgcagctgttacag 438
              |||||||||||||||||  |  |  ||| |||| |||| || || |||||| | ||||||
Sbjct: 124604 aatctggcaagtcagcagtctaagttgtttgatgaggagcttcagttgcagatattacag 124545

                                               
Query: 439    aaactacagcagcagtcactgatgtcacaatcc 471
              ||||| |||||||| ||||||||||||||||||
Sbjct: 124544 aaactgcagcagcaatcactgatgtcacaatcc 124512
to top
>ref|XM_633242.1| Dictyostelium discoideum hypothetical protein (DDB0218690), partial
           mRNA
          Length = 612

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 279 caacaaaaacaaccaccaccatctcca 305
           |||||| ||||||||||||||||||||
Sbjct: 202 caacaacaacaaccaccaccatctcca 228
to top
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 250218

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 280    aacaaaaacaaccaccaccatctccaacag 309
              ||||| ||||||||||||| ||||||||||
Sbjct: 177602 aacaacaacaaccaccaccctctccaacag 177631
to top
>gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complete sequence
          Length = 218283

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 364    cctgggcagctagctaatctgg 385
              ||||||||||||||||||||||
Sbjct: 130053 cctgggcagctagctaatctgg 130074
to top
>emb|AL929257.9| Mouse DNA sequence from clone RP23-75A23 on chromosome 2, complete
              sequence
          Length = 180619

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 158    agatcagaagcaagatcagcag 179
              ||||||||||||||||||||||
Sbjct: 125912 agatcagaagcaagatcagcag 125891
to top
>gb|AC147086.3| Pan troglodytes BAC clone RP43-58O23 from 7, complete sequence
          Length = 154679

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 273   atgcagcaacaaaaacaacca 293
             |||||||||||||||||||||
Sbjct: 17871 atgcagcaacaaaaacaacca 17851
to top
>gb|AC099551.2| Homo sapiens BAC clone RP11-685O3 from 7, complete sequence
          Length = 22367

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 273  atgcagcaacaaaaacaacca 293
            |||||||||||||||||||||
Sbjct: 3126 atgcagcaacaaaaacaacca 3146
to top
>emb|AL590135.5| Human DNA sequence from clone RP11-307O1 on chromosome 1 Contains a
             ribosomal protein L39 (RPL39) pseudogene, complete
             sequence
          Length = 77427

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   aacaaaaacaaccaccaccat 300
             |||||||||||||||||||||
Sbjct: 69540 aacaaaaacaaccaccaccat 69560
to top
>emb|AL353611.19| Human DNA sequence from clone RP11-447M12 on chromosome 9 Contains the
             FCN1 gene for ficolin (collagen/fibrinogen domain
             containing) 1 and a novel gene, complete sequence
          Length = 104972

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   caacaaaaacaaccaccacca 299
             |||||||||||||||||||||
Sbjct: 31145 caacaaaaacaaccaccacca 31125
to top
>gb|AC131205.3| Homo sapiens 12 BAC RP11-185H22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 110790

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   caacaaaaacaaccaccacca 299
             |||||||||||||||||||||
Sbjct: 76528 caacaaaaacaaccaccacca 76508
to top
>emb|AL603662.11| Mouse DNA sequence from clone RP23-396M19 on chromosome 11 Contains the
             3' end of the Myh10 gene for non-muscle myosin heavy chain
             10, the Ndel1 gene for nuclear distribution gene E-like
             homolog 1 (A. nidulans), three genes for novel proteins
             (9930039A11Rik, 1810012H11Rik and D130071N09), the Rpl26
             gene for ribosomal protein L26, gene Oppo1-pending (oppo
             1), gene RAN guanine nucleotide release factor
             (Rangnrf-pending) and three CpG islands, complete sequence
          Length = 201275

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    ctcccaagctccatcagcaaa 87
             |||||||||||||||||||||
Sbjct: 12900 ctcccaagctccatcagcaaa 12920
to top
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03,
              complete sequence
          Length = 165933

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 291    ccaccaccatctccaacagct 311
              |||||||||||||||||||||
Sbjct: 122943 ccaccaccatctccaacagct 122963
to top
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0081F12 from chromosome 10, complete sequence
          Length = 128388

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 291   ccaccaccatctccaacagct 311
             |||||||||||||||||||||
Sbjct: 17010 ccaccaccatctccaacagct 17030
to top
>ref|XM_396531.2| PREDICTED: Apis mellifera similar to ENSANGP00000019586
           (LOC413080), mRNA
          Length = 1572

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 98  taatgatttgtcaaatgcagcactt 122
           ||||||||||||||||| |||||||
Sbjct: 585 taatgatttgtcaaatgaagcactt 609
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 291     ccaccaccatctccaacagct 311
               |||||||||||||||||||||
Sbjct: 4355402 ccaccaccatctccaacagct 4355422
to top
>gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, complete sequence
          Length = 177385

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 280    aacaaaaacaaccaccaccatctccaaca 308
              |||||||||||||||||||| | ||||||
Sbjct: 126123 aacaaaaacaaccaccaccaccaccaaca 126095
to top
>ref|XM_311308.2| Anopheles gambiae str. PEST ENSANGP00000017680
           (ENSANGG00000015191), partial mRNA
          Length = 860

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 275 gcagcaacaaaaacaaccaccacca 299
           |||||||||| ||||||||||||||
Sbjct: 827 gcagcaacaacaacaaccaccacca 851
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 291     ccaccaccatctccaacagct 311
               |||||||||||||||||||||
Sbjct: 4356223 ccaccaccatctccaacagct 4356243
to top
>emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chromosome 2, complete
             sequence
          Length = 181014

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   caacaaaaacaaccaccacca 299
             |||||||||||||||||||||
Sbjct: 74669 caacaaaaacaaccaccacca 74689
to top
>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete
              sequence
          Length = 232587

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    ccaggcccaggctcaaactaa 238
              |||||||||||||||||||||
Sbjct: 169890 ccaggcccaggctcaaactaa 169910
to top
>emb|AL671867.8| Mouse DNA sequence from clone RP23-131J17 on chromosome 4, complete
             sequence
          Length = 202342

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   caacaaaaacaaccaccacca 299
             |||||||||||||||||||||
Sbjct: 12122 caacaaaaacaaccaccacca 12142
to top
>ref|XM_629930.1| Dictyostelium discoideum hypothetical protein (DDB0184068), partial
           mRNA
          Length = 2541

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 276 cagcaacaaaaacaaccaccacca 299
           ||||||||| ||||||||||||||
Sbjct: 703 cagcaacaacaacaaccaccacca 726
to top
>gb|AC161342.10| Mus musculus chromosome 1, clone RP23-313K17, complete sequence
          Length = 181572

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   aaaacaaccaccaccatctc 303
             ||||||||||||||||||||
Sbjct: 40254 aaaacaaccaccaccatctc 40235
to top
>gb|AC145508.3| Dasypus novemcinctus clone VMRC5-464O17, complete sequence
          Length = 169201

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   aacaaaaacaaccaccacca 299
             ||||||||||||||||||||
Sbjct: 66685 aacaaaaacaaccaccacca 66666
to top
>ref|NG_002432.1| Homo sapiens major histocompatibility complex, class II, DR51 haplotype
             (DR51) on chromosome 6
          Length = 137374

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   aacaaaaacaaccaccacca 299
             ||||||||||||||||||||
Sbjct: 53865 aacaaaaacaaccaccacca 53884
to top
>gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 278  gcaacaaaaacaaccaccaccatc 301
            ||||||| ||||||||||||||||
Sbjct: 5068 gcaacaacaacaaccaccaccatc 5091
to top
>gb|AC002433.2| Homo sapiens BAC clone CTA-317M2 from 7, complete sequence
          Length = 139919

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   gcaacaaaaacaaccaccaccatc 301
             ||||||| ||||||||||||||||
Sbjct: 74738 gcaacaacaacaaccaccaccatc 74715
to top
>emb|CR450852.9| Zebrafish DNA sequence from clone DKEY-67C24 in linkage group 12,
              complete sequence
          Length = 165449

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    aaatgcagcacttccattga 129
              ||||||||||||||||||||
Sbjct: 134651 aaatgcagcacttccattga 134670
to top
>gb|AC146510.3| Pan troglodytes BAC clone RP43-64B24 from 7, complete sequence
          Length = 153089

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 278    gcaacaaaaacaaccaccaccatc 301
              ||||||| ||||||||||||||||
Sbjct: 143899 gcaacaacaacaaccaccaccatc 143922
to top
>gb|AC124694.3| Mus musculus BAC clone RP24-171H8 from chromosome 14, complete sequence
          Length = 154741

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ctccatcagcaaatgaaacc 94
              ||||||||||||||||||||
Sbjct: 105573 ctccatcagcaaatgaaacc 105554
to top
>gb|AC002288.1|HUAC002288 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-249B10, complete
             sequence
          Length = 213633

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   accaccaccatctccaacag 309
             ||||||||||||||||||||
Sbjct: 22770 accaccaccatctccaacag 22789
to top
>gb|AC083964.3| Homo sapiens chromosome 8, clone RP11-91J19, complete sequence
          Length = 161160

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    aacaaaaacaaccaccacca 299
              ||||||||||||||||||||
Sbjct: 129628 aacaaaaacaaccaccacca 129609
to top
>gb|AC130451.2| Homo sapiens chromosome 16 clone CTA-249B10, complete sequence
          Length = 215866

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    accaccaccatctccaacag 309
              ||||||||||||||||||||
Sbjct: 193091 accaccaccatctccaacag 193072
to top
>gb|AC124355.3| Mus musculus BAC clone RP24-483G17 from chromosome 18, complete sequence
          Length = 161461

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 276    cagcaacaaaaacaaccaccacca 299
              ||||||||| ||||||||||||||
Sbjct: 132421 cagcaacaacaacaaccaccacca 132398
to top
>gb|AC107707.10| Mus musculus chromosome 1, clone RP24-268C13, complete sequence
          Length = 178000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    aaaacaaccaccaccatctc 303
              ||||||||||||||||||||
Sbjct: 170697 aaaacaaccaccaccatctc 170678
to top
>gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, complete sequence
          Length = 188373

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 278    gcaacaaaaacaaccaccaccatc 301
              ||||||| ||||||||||||||||
Sbjct: 129890 gcaacaacaacaaccaccaccatc 129867
to top
>gb|AC146549.8| Medicago truncatula clone mth2-7p18, complete sequence
          Length = 96612

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   tccagaatcagatgcagcaacaaa 285
             ||||||||||||| ||||||||||
Sbjct: 44122 tccagaatcagattcagcaacaaa 44099



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   tccagaatcagatgcagcaacaaa 285
             ||||||||||||| ||||||||||
Sbjct: 33300 tccagaatcagattcagcaacaaa 33277
to top
>emb|AL713966.7| Human DNA sequence from clone XXbac-161M6 on chromosome 6 contains the
             HLA-DRB5 gene for major histocompatibility complex, class
             II, DR beta 5, the HLA-DRB6 pseudogene for major
             histocompatibility complex, class II, DR beta 6, the
             HLA-DRB1 gene for major histocompatibility complex, class
             II, DR beta 1 and one CpG island, complete sequence
          Length = 124047

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   aacaaaaacaaccaccacca 299
             ||||||||||||||||||||
Sbjct: 40538 aacaaaaacaaccaccacca 40557
to top
>emb|AL445984.6| Human DNA sequence from clone RP11-360A9 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 181419

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     atactacaacagaatagcat 55
              ||||||||||||||||||||
Sbjct: 119039 atactacaacagaatagcat 119020
to top
>emb|AL359920.15| Human DNA sequence from clone RP11-359P14 on chromosome 13 Contains a
             novel gene and a TAR DNA binding protein (TARDBP)
             pseudogene, the 5' UTR of a novel gene (FLJ21007) and 2
             CpG islands, complete sequence
          Length = 226860

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 142   ccatcagaaatcaccaagatcagaagca 169
             |||||||||||||| ||| |||||||||
Sbjct: 69066 ccatcagaaatcacaaaggtcagaagca 69039
to top
>emb|AL353148.8| Human DNA sequence from clone RP11-298H24 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 181308

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 515   aatttttcttgtagaaatgcaaca 538
             ||||||||||||| ||||||||||
Sbjct: 69753 aatttttcttgtaaaaatgcaaca 69776
to top
>emb|CR857614.1| Pongo pygmaeus mRNA; cDNA DKFZp459O2030 (from clone DKFZp459O2030)
          Length = 3949

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 513  aaaatttttcttgtagaaat 532
            ||||||||||||||||||||
Sbjct: 2496 aaaatttttcttgtagaaat 2515
to top
>gb|AC079075.6| Homo sapiens chromosome 15, clone RP11-300G22, complete sequence
          Length = 209955

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    aacaaaaacaaccaccacca 299
              ||||||||||||||||||||
Sbjct: 103715 aacaaaaacaaccaccacca 103734
to top
>gb|AC013787.15| Homo sapiens chromosome 15, clone RP11-531E13, complete sequence
          Length = 176304

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    aacaaaaacaaccaccacca 299
              ||||||||||||||||||||
Sbjct: 173595 aacaaaaacaaccaccacca 173576
to top
>gb|AC091206.3| Drosophila melanogaster 3L BAC RP98-19M9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 178019

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   cacttgcagctgttacagaa 440
             ||||||||||||||||||||
Sbjct: 46518 cacttgcagctgttacagaa 46499
to top
>gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 172284

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   cacttgcagctgttacagaa 440
             ||||||||||||||||||||
Sbjct: 79691 cacttgcagctgttacagaa 79710
to top
>dbj|AK074938.1| Homo sapiens cDNA FLJ90457 fis, clone NT2RP3001685, weakly similar to
            PRPE PROTEIN
          Length = 2214

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 513  aaaatttttcttgtagaaat 532
            ||||||||||||||||||||
Sbjct: 1731 aaaatttttcttgtagaaat 1750
to top
>dbj|AP007215.1| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-22B7, complete
            sequence
          Length = 38311

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 277  agcaacaaaaacaaccaccaccat 300
            ||||||| ||||||||||||||||
Sbjct: 8368 agcaacagaaacaaccaccaccat 8391
to top
>ref|NM_206266.1| Drosophila melanogaster karst CG12008-RB, transcript variant B (kst),
            mRNA
          Length = 12762

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  cacttgcagctgttacagaa 440
            ||||||||||||||||||||
Sbjct: 5597 cacttgcagctgttacagaa 5616
to top
>ref|NM_206265.1| Drosophila melanogaster karst CG12008-RC, transcript variant C (kst),
            mRNA
          Length = 13029

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  cacttgcagctgttacagaa 440
            ||||||||||||||||||||
Sbjct: 5597 cacttgcagctgttacagaa 5616
to top
>dbj|AB034628.1| Equus caballus microsatellite TKY319, TKY320 DNA
          Length = 780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 553 cacatttcacttgcccaaca 572
           ||||||||||||||||||||
Sbjct: 409 cacatttcacttgcccaaca 390
to top
>ref|NM_079176.1| Drosophila melanogaster karst CG12008-RA, transcript variant A (kst),
            mRNA
          Length = 12699

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  cacttgcagctgttacagaa 440
            ||||||||||||||||||||
Sbjct: 5597 cacttgcagctgttacagaa 5616
to top
>gb|AC093900.3| Homo sapiens BAC clone RP11-730E1 from 4, complete sequence
          Length = 152581

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    aacaaaaacaaccaccacca 299
              ||||||||||||||||||||
Sbjct: 149791 aacaaaaacaaccaccacca 149772
to top
>gb|AC068234.8| Homo sapiens chromosome 17, clone RP11-290H9, complete sequence
          Length = 174566

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   acaaaaacaaccaccaccat 300
             ||||||||||||||||||||
Sbjct: 85081 acaaaaacaaccaccaccat 85100
to top
>gb|AC034205.4| Homo sapiens chromosome 5 clone CTB-23I7, complete sequence
          Length = 159562

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    caacagaatagcatgcagtt 61
             ||||||||||||||||||||
Sbjct: 78900 caacagaatagcatgcagtt 78881
to top
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 514    aaatttttcttgtagaaatgcaac 537
              |||||||||||||| |||||||||
Sbjct: 447783 aaatttttcttgtaaaaatgcaac 447760
to top
>gb|AC008562.5| Homo sapiens chromosome 5 clone CTC-535M15, complete sequence
          Length = 127259

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    tacaacagaatagcatgcag 59
             ||||||||||||||||||||
Sbjct: 30092 tacaacagaatagcatgcag 30111
to top
>gb|AC153362.4| Mus musculus BAC clone RP23-92N20 from chromosome 10, complete sequence
          Length = 214898

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 276    cagcaacaaaaacaaccaccacca 299
              ||||||||| ||||||||||||||
Sbjct: 196702 cagcaacaacaacaaccaccacca 196679
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 560      cacttgcccaacaacaagtgatgccccaacaa 591
                ||||| ||||||||||| ||||||| ||||||
Sbjct: 29146845 cactttcccaacaacaaatgatgcctcaacaa 29146876
to top
>dbj|AP006345.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-186D19, complete
              sequence
          Length = 150214

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 277    agcaacaaaaacaaccaccaccat 300
              ||||||| ||||||||||||||||
Sbjct: 101464 agcaacagaaacaaccaccaccat 101487
to top
>gb|AC154524.2| Mus musculus BAC clone RP24-68D23 from chromosome 16, complete sequence
          Length = 252926

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 275   gcagcaacaaaaacaaccaccacc 298
             |||||||||| |||||||||||||
Sbjct: 95077 gcagcaacaacaacaaccaccacc 95054
to top
>gb|AC078920.17| Homo sapiens 12 BAC RP11-121G22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 156323

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   aaaatttttcttgtagaaat 532
             ||||||||||||||||||||
Sbjct: 90139 aaaatttttcttgtagaaat 90120
to top
>gb|AF330194.1| Pythium torulosum internal transcribed spacer 1, 5.8S ribosomal RNA
           gene, and internal transcribed spacer 2, complete
           sequence
          Length = 775

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 501 tccaagagcagcaaaatttt 520
           ||||||||||||||||||||
Sbjct: 704 tccaagagcagcaaaatttt 685
to top
>gb|AF265340.1|AF265340 Homo sapiens chromosome 16 clone BAC 504N19, complete sequence
          Length = 180348

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    accaccaccatctccaacag 309
              ||||||||||||||||||||
Sbjct: 129911 accaccaccatctccaacag 129930
to top
>ref|NM_024560.2| Homo sapiens FLJ21963 protein (FLJ21963), mRNA
          Length = 3033

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 513  aaaatttttcttgtagaaat 532
            ||||||||||||||||||||
Sbjct: 2550 aaaatttttcttgtagaaat 2569
to top
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0596H10
          Length = 166570

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 560    cacttgcccaacaacaagtgatgccccaacaa 591
              ||||| ||||||||||| ||||||| ||||||
Sbjct: 161832 cactttcccaacaacaaatgatgcctcaacaa 161863
to top
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1215_E11
          Length = 105301

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 560   cacttgcccaacaacaagtgatgccccaacaa 591
             ||||| ||||||||||| ||||||| ||||||
Sbjct: 14132 cactttcccaacaacaaatgatgcctcaacaa 14163
to top
>dbj|AK074267.1| Homo sapiens cDNA FLJ23687 fis, clone HEP10109
          Length = 2421

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 513 aaaatttttcttgtagaaat 532
           ||||||||||||||||||||
Sbjct: 974 aaaatttttcttgtagaaat 993
to top
>dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G19, full
            insert sequence
          Length = 3550

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 560  cacttgcccaacaacaagtgatgccccaacaa 591
            ||||| ||||||||||| ||||||| ||||||
Sbjct: 2425 cactttcccaacaacaaatgatgcctcaacaa 2456
to top
>emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 in linkage group 22,
             complete sequence
          Length = 206348

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   aaatgcagcacttccattga 129
             ||||||||||||||||||||
Sbjct: 56681 aaatgcagcacttccattga 56662
to top
>gb|AC147513.16| Mus musculus chromosome 1, clone RP23-105K16, complete sequence
          Length = 209834

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   aaaacaaccaccaccatctc 303
             ||||||||||||||||||||
Sbjct: 80062 aaaacaaccaccaccatctc 80043
to top
>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete
              sequence
          Length = 297894

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    cacttgcagctgttacagaa 440
              ||||||||||||||||||||
Sbjct: 288756 cacttgcagctgttacagaa 288775
to top
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 308     agcttttacttcaccaacag 327
               ||||||||||||||||||||
Sbjct: 1279698 agcttttacttcaccaacag 1279679
to top
>gb|AC120425.12| Mus musculus chromosome 14, clone RP24-510K2, complete sequence
          Length = 209178

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   ctccatcagcaaatgaaacc 94
            ||||||||||||||||||||
Sbjct: 3746 ctccatcagcaaatgaaacc 3727
to top
>dbj|AP006240.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-359D8, complete
             sequence
          Length = 193414

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    cagaatagcatgcagtttaa 64
             ||||||||||||||||||||
Sbjct: 43645 cagaatagcatgcagtttaa 43664
to top
>gb|AC132321.2| Mus musculus BAC clone RP24-261H23 from 8, complete sequence
          Length = 173138

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    aacaaaaacaaccaccacca 299
              ||||||||||||||||||||
Sbjct: 134643 aacaaaaacaaccaccacca 134624
to top
>gb|AF022656.1|AF022656 Drosophila melanogaster beta-H spectrin (karst) gene, partial cds
          Length = 2976

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 cacttgcagctgttacagaa 440
           ||||||||||||||||||||
Sbjct: 661 cacttgcagctgttacagaa 680
to top
>emb|AL662809.14| Mouse DNA sequence from clone RP23-441I8 on chromosome 11, complete
             sequence
          Length = 103129

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    cagaatagcatgcagtttaa 64
             ||||||||||||||||||||
Sbjct: 54117 cagaatagcatgcagtttaa 54098
to top
>emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on chromosome 16, complete
              sequence
          Length = 220149

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 433    ttacagaaactacagcagcagtcactga 460
              ||||||| |||| |||||||||||||||
Sbjct: 148007 ttacagagactaaagcagcagtcactga 148034
to top
>gb|AC142105.7| Mus musculus BAC clone RP24-240E7 from chromosome 10, complete sequence
          Length = 163869

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 276   cagcaacaaaaacaaccaccacca 299
             ||||||||| ||||||||||||||
Sbjct: 40856 cagcaacaacaacaaccaccacca 40833
to top
>emb|AL671914.9| Mouse DNA sequence from clone RP23-1A3 on chromosome X, complete
             sequence
          Length = 229809

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   aacaaaaacaaccaccacca 299
             ||||||||||||||||||||
Sbjct: 27667 aacaaaaacaaccaccacca 27686
to top
>gb|AC090135.13| Homo sapiens chromosome 8, clone RP11-18D5, complete sequence
          Length = 103709

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   aacaaaaacaaccaccacca 299
             ||||||||||||||||||||
Sbjct: 51104 aacaaaaacaaccaccacca 51123
to top
>dbj|AP000494.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308,
             anti-oncogene region, section 2/5
          Length = 200000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    cagaatagcatgcagtttaa 64
             ||||||||||||||||||||
Sbjct: 40931 cagaatagcatgcagtttaa 40950
to top
>dbj|AP004370.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-512I24, complete
              sequences
          Length = 193212

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     gctccatcagcaaatgaaac 93
              ||||||||||||||||||||
Sbjct: 146298 gctccatcagcaaatgaaac 146279
to top
>dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-169D4, complete
             sequences
          Length = 98501

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   gcagcaacaaaaacaaccac 294
             ||||||||||||||||||||
Sbjct: 82967 gcagcaacaaaaacaaccac 82986
to top
>dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response factor 7a, partial cds
          Length = 3372

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 560  cacttgcccaacaacaagtgatgccccaacaa 591
            ||||| ||||||||||| ||||||| ||||||
Sbjct: 2000 cactttcccaacaacaaatgatgcctcaacaa 2031


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,528,655
Number of Sequences: 3902068
Number of extensions: 6528655
Number of successful extensions: 138368
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137937
Number of HSP's gapped (non-prelim): 431
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top