Clone Name | basd3n02 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y46K_DROME (P53404) Hypothetical protein CG10349 in chromosome 3 | 30 | 4.0 | 2 | LCTP_BACSU (P55910) L-lactate permease | 30 | 4.0 |
---|
>Y46K_DROME (P53404) Hypothetical protein CG10349 in chromosome 3| Length = 404 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 24 MQNHILQQNSMQFNPPKLHQQMKPINDLSNAALPLN-QLGAIRN 152 M+ ++S+ F PP +QQM +N AA+P++ QL IRN Sbjct: 1 MEEQSPPRDSLLFGPPTEYQQMPKVNLFRVAAIPVDVQLQRIRN 44
>LCTP_BACSU (P55910) L-lactate permease| Length = 541 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/40 (30%), Positives = 26/40 (65%) Frame = +3 Query: 12 RQLYMQNHILQQNSMQFNPPKLHQQMKPINDLSNAALPLN 131 + L+ + +L Q+++ F P LHQQ+ + ++ +A+PL+ Sbjct: 315 KALFQEGGLLYQSTLLFKMPFLHQQIMKMPPIAPSAMPLD 354 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,705,523 Number of Sequences: 219361 Number of extensions: 813066 Number of successful extensions: 1485 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1466 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1485 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)