ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bah63h03 | 617 | BJ482092 | not_full | emb|X53580.1|HVGLN2R Barley gln mRNA for glutamine synthetase 2 (EC 6.3.1.2) Length = 1600 | 273 | not_full | GLNA2_HORVU (P13564) Glutamine synthetase leaf isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Chloroplast GS2) Length = 434 | 111 | -- | --- | - | -- | --- | - |
| bah63h02 | 608 | BJ551604 | full | emb|X62388.1|HV1433PH H.vulgare mRNA for 14-3-3 protein homologue (14-3-3a) Length = 1361 | 500 | full | 1433A_HORVU (P29305) 14-3-3-like protein A (14-3-3A) Length = 262 | 165 | -- | --- | - | -- | --- | - |
| bah63h01 | 612 | BJ482091 | full | gb|AY236152.1| Triticum aestivum cytosolic malate dehydrogenase mRNA, partial cds Length = 683 | 134 | full | MDHC_MAIZE (Q08062) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) Length = 332 | 354 | -- | --- | - | -- | --- | - |
| bah63g24 | 570 | BJ482090 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 403 | full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| bah63g23 | 622 | BJ482089 | not_full | gb|DQ019635.1| Triticum aestivum U2AF large subunit (U2AF65) mRNA, complete cds Length = 1786 | 63 | not_full | CADHO_XENLA (P33147) Neural-cadherin 2 precursor (N-cadherin 2) Length = 906 | 1 | -- | --- | - | -- | --- | - |
| bah63g22 | 534 | BJ551603 | not_full | gb|AF262984.1|AF262984 Triticum aestivum cyclophilin A-3 (CyP3) mRNA, complete cds Length = 869 | 500 | not_full | CYPH_MAIZE (P21569) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) Length = 172 | 224 | -- | --- | - | -- | --- | - |
| bah63g20 | 625 | BJ551602 | full | emb|AJ234400.1|HVU234400 Hordeum vulgare partial mRNA; clone cMWG0645 Length = 1050 | 500 | not_full | ACT7_ARATH (P53492) Actin-7 (Actin-2) Length = 377 | 412 | -- | --- | - | -- | --- | - |
| bah63g19 | 596 | BJ551601 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 76 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 139 | -- | --- | - | -- | --- | - |
| bah63g18 | 598 | BJ482088 | full | ref|XM_468478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 393 | 62 | not_full | VATF_ARATH (Q9ZQX4) Probable vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 128 | 32 | -- | --- | - | -- | --- | - |
| bah63g17 | 545 | BJ482087 | not_full | ref|XM_468732.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2367 | 47 | not_full | KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) Length = 817 | 28 | -- | --- | - | -- | --- | - |
| bah63g16 | 562 | BJ482086 | not_full | dbj|AK120928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P13, full insert sequence Length = 4399 | 50 | not_full | CLPP_CARHZ (Q3AF96) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) Length = 195 | 349 | -- | --- | - | -- | --- | - |
| bah63g15 | 480 | BJ482085 | not_full | ref|NM_189108.2| Oryza sativa (japonica cultivar-group), mRNA Length = 934 | 42 | not_full | WHRN_RAT (Q810W9) Whirlin (CASK-interacting protein CIP98) Length = 920 | 92 | -- | --- | - | -- | --- | - |
| bah63g13 | 572 | BJ482084 | not_full | dbj|AK069426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020D04, full insert sequence Length = 1801 | 79 | not_full | ARP1_YEAST (P38696) Centractin (Actin-like protein) Length = 384 | 396 | -- | --- | - | -- | --- | - |
| bah63g09 | 552 | BJ482083 | not_full | ref|NM_194620.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase ZRP4 (OSJNBa0023I19.18), mRNA Length = 1101 | 69 | not_full | ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) Length = 364 | 20 | -- | --- | - | -- | --- | - |
| bah63g07 | 615 | BJ482082 | full | gb|BT018674.1| Zea mays clone EL01N0510E08.d mRNA sequence Length = 1769 | 126 | not_full | CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A) Length = 659 | 52 | -- | --- | - | -- | --- | - |
| bah63g05 | 634 | BJ482081 | not_full | ref|XM_464580.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2963 | 74 | not_full | NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein homolog) Length = 561 | 66 | -- | --- | - | -- | --- | - |
| bah63g04 | 409 | BJ482080 | full | gb|BT009239.1| Triticum aestivum clone wlk1.pk0004.e7:fis, full insert mRNA sequence Length = 1415 | 131 | not_full | LPAT_MAIZE (Q41745) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC 2.3.1.51) (Phospholipid synthesis protein 1) Length = 374 | 37 | -- | --- | - | -- | --- | - |
| bah63g03 | 640 | BJ482079 | not_full | gb|BT009239.1| Triticum aestivum clone wlk1.pk0004.e7:fis, full insert mRNA sequence Length = 1415 | 127 | not_full | LPAT_MAIZE (Q41745) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC 2.3.1.51) (Phospholipid synthesis protein 1) Length = 374 | 22 | -- | --- | - | -- | --- | - |
| bah63g01 | 601 | BJ551600 | not_full | gb|AY106832.1| Zea mays PCO074808 mRNA sequence Length = 1378 | 46 | not_full | YAI5_SCHPO (Q09893) Hypothetical protein C24B11.05 in chromosome I Length = 226 | 26 | -- | --- | - | -- | --- | - |
| bah63f24 | 619 | BJ482078 | not_full | gb|AY103974.1| Zea mays PCO123560 mRNA sequence Length = 1889 | 500 | not_full | G3PB_ARATH (P25857) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) Length = 447 | 267 | -- | --- | - | -- | --- | - |
| bah63f23 | 524 | BJ482077 | not_full | ref|XM_466605.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2494 | 22 | not_full | ISPG_PARUW (Q6MD85) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 654 | 48 | -- | --- | - | -- | --- | - |
| bah63f21 | 541 | BJ551599 | full | emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 | 500 | not_full | PIP11_ORYSA (Q6EU94) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) Length = 289 | 196 | -- | --- | - | -- | --- | - |
| bah63f20 | 612 | BJ482076 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 75 | not_full | NORA_STAAW (P0A0J6) Quinolone resistance protein norA Length = 388 | 48 | -- | --- | - | -- | --- | - |
| bah63f17 | 535 | BJ551598 | not_full | emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide pyrophosphatase/phosphodiesterase (npp gene) Length = 1268 | 59 | not_full | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) Length = 368 | 14 | -- | --- | - | -- | --- | - |
| bah63f16 | 567 | BJ482075 | not_full | gb|AC102554.7| Mus musculus chromosome 9, clone RP23-159E10, complete sequence Length = 197397 | 14 | not_full | FBX44_HUMAN (Q9H4M3) F-box only protein 44 (F-box protein FBX30) (F-box/G-domain protein 3) Length = 255 | 9 | -- | --- | - | -- | --- | - |
| bah63f15 | 510 | BJ482074 | not_full | ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 | 114 | not_full | GOX2_ARATH (Q9LRR9) Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 (EC 1.1.3.15) (Glycolate oxidase 2) (GOX 2) (Short chain alpha-hydroxy acid oxidase 2) Length = 367 | 47 | -- | --- | - | -- | --- | - |
| bah63f14 | 545 | BJ482073 | not_full | ref|XM_465059.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2568 | 500 | not_full | CH602_MYCLE (P09239) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2) (65 kDa antigen) Length = 540 | 11 | -- | --- | - | -- | --- | - |
| bah63f12 | 677 | BJ482072 | not_full | ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125 mRNA Length = 1513 | 81 | not_full | QORL_ARATH (Q9ZUC1) Quinone oxidoreductase-like protein At1g23740, chloroplast precursor (EC 1.-.-.-) Length = 386 | 246 | -- | --- | - | -- | --- | - |
| bah63f11 | 623 | BJ482071 | not_full | ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125 mRNA Length = 1513 | 79 | not_full | QORL_ARATH (Q9ZUC1) Quinone oxidoreductase-like protein At1g23740, chloroplast precursor (EC 1.-.-.-) Length = 386 | 255 | -- | --- | - | -- | --- | - |
| bah63f10 | 529 | BJ482070 | not_full | gb|AY104909.1| Zea mays PCO111730 mRNA sequence Length = 1169 | 24 | not_full | ELMO1_MOUSE (Q8BPU7) Engulfment and cell motility protein 1 (CED-12 homolog) Length = 727 | 14 | -- | --- | - | -- | --- | - |
| bah63f09 | 621 | BJ551597 | not_full | emb|AJ310426.1|HVU310426 Hordeum vulgare mRNA for cathepsin B (cathB gene) Length = 1277 | 218 | not_full | CATB_MOUSE (P10605) Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) [Contains: Cathepsin B light chain; Cathepsin B heavy chain] Length = 339 | 178 | -- | --- | - | -- | --- | - |
| bah63f08 | 603 | BJ482069 | not_full | ref|XM_463361.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1656 | 57 | not_full | ZHX2_PONPY (Q5R7F2) Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) Length = 837 | 9 | -- | --- | - | -- | --- | - |
| bah63f06 | 639 | BJ482068 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 425 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 161 | -- | --- | - | -- | --- | - |
| bah63f05 | 679 | BJ482067 | not_full | ref|XM_474331.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 14001 | 50 | not_full | SACS_MOUSE (Q9JLC8) Sacsin Length = 3830 | 11 | -- | --- | - | -- | --- | - |
| bah63f03 | 648 | BJ482066 | not_full | ref|XM_450263.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2132 | 247 | not_full | MAD47_ORYSA (Q5K4R0) MADS-box transcription factor 47 (OsMADS47) Length = 246 | 3 | -- | --- | - | -- | --- | - |
| bah63e23 | 452 | BJ551596 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 235 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 59 | -- | --- | - | -- | --- | - |
| bah63e22 | 615 | BJ482065 | full | gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 | 81 | not_full | RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 | 20 | -- | --- | - | -- | --- | - |
| bah63e21 | 399 | BJ482064 | not_full | emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving protein of photosystem II Length = 967 | 118 | not_full | PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 | 28 | -- | --- | - | -- | --- | - |
| bah63e20 | 579 | BJ482063 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 24 | not_full | TRUA_DESVH (Q72DL8) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I) Length = 297 | 13 | -- | --- | - | -- | --- | - |
| bah63e19 | 610 | BJ482062 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 124 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 40 | -- | --- | - | -- | --- | - |
| bah63e18 | 617 | BJ482061 | full | gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 | 81 | full | RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 | 20 | -- | --- | - | -- | --- | - |
| bah63e17 | 510 | BJ551595 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 235 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 33 | -- | --- | - | -- | --- | - |
| bah63e15 | 549 | BJ551594 | full | dbj|D13153.1|WHTCYS1 Triticum aestivum mRNA for O-acetylserine (thiol) lyase Length = 1371 | 129 | full | CYSK_WHEAT (P38076) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (OAS-TL A) Length = 325 | 110 | -- | --- | - | -- | --- | - |
| bah63e14 | 499 | BJ482060 | not_full | gb|BT008940.1| Triticum aestivum clone wdi1c.pk007.m16:fis, full insert mRNA sequence Length = 1878 | 28 | not_full | PABL_STRGR (P33585) Protein Y (ORF-3) (Fragment) Length = 307 | 81 | -- | --- | - | -- | --- | - |
| bah63e13 | 650 | BJ551593 | not_full | gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1577 | 182 | not_full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 69 | -- | --- | - | -- | --- | - |
| bah63e11 | 479 | BJ482059 | not_full | dbj|AK065635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030N19, full insert sequence Length = 1502 | 80 | not_full | APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1) Length = 412 | 412 | -- | --- | - | -- | --- | - |
| bah63e07 | 527 | BJ482058 | not_full | dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H01, full insert sequence Length = 957 | 75 | not_full | Y5161_ARATH (Q9M015) Protein At5g01610 Length = 170 | 24 | -- | --- | - | -- | --- | - |
| bah63e06 | 704 | BJ551592 | full | gb|AF493562.1| Hordeum vulgare subsp. vulgare sucrose-phosphatase mRNA, complete cds Length = 1583 | 111 | not_full | SPS_ORYSA (Q43802) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1049 | 13 | -- | --- | - | -- | --- | - |
| bah63e05 | 518 | BJ482057 | not_full | ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 | 500 | full | PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast precursor (CP22) Length = 274 | 31 | -- | --- | - | -- | --- | - |
| bah63e02 | 521 | BJ551591 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 244 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 33 | -- | --- | - | -- | --- | - |
