ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63g18 |
|---|---|
| Clone Library Name | barley_pub |
>VATF_ARATH (Q9ZQX4) Probable vacuolar ATP synthase subunit F (EC 3.6.3.14)| (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 128 Score = 222 bits (565), Expect = 7e-58 Identities = 108/126 (85%), Positives = 122/126 (96%) Frame = +3 Query: 201 MAGRSNIPANNSALIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFK 380 MAGR+ IPA NSALIA+IADEDTV GFLMAGVGNVD+R+KTNYL+VD+KTTV+QIEDAFK Sbjct: 1 MAGRATIPARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFK 60 Query: 381 EFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLF 560 EF+AR+DIAI+L+SQYIANMIRFLVDSYNKP+PAILEIPSKDHPYDPA DSVLSRVKYLF Sbjct: 61 EFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120 Query: 561 SADSVA 578 SA+SV+ Sbjct: 121 SAESVS 126
>VATF_CAEEL (Q23680) Probable vacuolar ATP synthase subunit F (EC 3.6.3.14)| (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 121 Score = 137 bits (346), Expect = 2e-32 Identities = 63/115 (54%), Positives = 91/115 (79%) Frame = +3 Query: 225 ANNSALIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDI 404 A ++A+I DEDTV GFL+ GVG ++ +K NYL+VD +TTV++IE+AF F AR+DI Sbjct: 4 AAKGKILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDI 63 Query: 405 AIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSAD 569 AI+LI+Q+IA MIR+ VD++ + IPA+LEIPSK+ PYDP+ DS+L+R + LF+ + Sbjct: 64 AIILINQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPE 118
>VATF_RAT (P50408) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 119 Score = 136 bits (342), Expect = 5e-32 Identities = 60/117 (51%), Positives = 88/117 (75%) Frame = +3 Query: 225 ANNSALIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDI 404 A LIA+I DEDTVTGFL+ G+G ++ + N+L+V+ TT+ +IED F++F R+DI Sbjct: 2 AGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDI 61 Query: 405 AIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 575 I+LI+QYIA M+R +D++ + IPA+LEIPSK+HPYD A DS+L R K +F+A+ + Sbjct: 62 GIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118
>VATF_MOUSE (Q9D1K2) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 119 Score = 136 bits (342), Expect = 5e-32 Identities = 60/117 (51%), Positives = 88/117 (75%) Frame = +3 Query: 225 ANNSALIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDI 404 A LIA+I DEDTVTGFL+ G+G ++ + N+L+V+ TT+ +IED F++F R+DI Sbjct: 2 AGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDI 61 Query: 405 AIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 575 I+LI+QYIA M+R +D++ + IPA+LEIPSK+HPYD A DS+L R K +F+A+ + Sbjct: 62 GIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118
>VATF_HUMAN (Q16864) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 119 Score = 132 bits (333), Expect = 6e-31 Identities = 58/117 (49%), Positives = 87/117 (74%) Frame = +3 Query: 225 ANNSALIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDI 404 A L A+I DEDTVTGFL+ G+G ++ + N+L+V+ TT+ +IED F++F R+DI Sbjct: 2 AGRGKLTAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDI 61 Query: 405 AIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 575 I+LI+QYIA M+R +D++ + IPA+LEIPSK+HPYD A DS+L R + +F+A+ + Sbjct: 62 GIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDL 118
>VATF_BOVIN (Q28029) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) (Fragment) Length = 110 Score = 129 bits (324), Expect = 6e-30 Identities = 55/109 (50%), Positives = 84/109 (77%) Frame = +3 Query: 249 IIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLISQY 428 +I DEDTVTGFL+ G+G ++ + N+L+V+ TT+ +IED F++F R+DI I+LI+QY Sbjct: 1 VIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQY 60 Query: 429 IANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 575 IA M+R +D++ + IPA+LEIPSK+HPYD A DS+L R + +F+A+ + Sbjct: 61 IAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDL 109
>VATF_ANOGA (Q17029) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 127 Score = 129 bits (323), Expect = 8e-30 Identities = 58/123 (47%), Positives = 85/123 (69%) Frame = +3 Query: 219 IPANNSALIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTARE 398 + A LI++I DEDT GFL+ GVG ++ + N+++VD T V +IED FK F R+ Sbjct: 4 LSAMKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSEIEDCFKRFIKRD 63 Query: 399 DIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSVA 578 DI I+LI+Q A +IR ++DS+ P PA+LEIPSKDHPYD + DS+L R K +F+ + + Sbjct: 64 DIDIILINQNYAELIRHVIDSHTAPTPAVLEIPSKDHPYDASKDSILRRAKGMFNPEDMI 123 Query: 579 SDR 587 ++R Sbjct: 124 ANR 126
>VATF_XENLA (Q9I8H3) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) (Fragment) Length = 110 Score = 124 bits (312), Expect = 2e-28 Identities = 54/109 (49%), Positives = 83/109 (76%) Frame = +3 Query: 249 IIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLISQY 428 +I DEDTVTGFL+ G+G ++ +K N+L+V+ +T+V +IE+ F+ F R+DI I+LI+Q+ Sbjct: 1 VIGDEDTVTGFLLGGIGELNKNRKPNFLVVEKETSVTEIEETFRSFLNRDDIGIILINQF 60 Query: 429 IANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 575 IA MIR ++D++ IPA+LEIPSK+HPYD DS+L R K +F+ + + Sbjct: 61 IAEMIRHVIDTHTISIPAVLEIPSKEHPYDATKDSILRRAKGMFTMEDL 109
>VATF1_DROME (Q24583) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 124 Score = 124 bits (312), Expect = 2e-28 Identities = 53/112 (47%), Positives = 81/112 (72%) Frame = +3 Query: 240 LIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLI 419 LI++I DEDT GFL+ GVG ++ + N+++VD T V ++ED FK F R+DI I+LI Sbjct: 11 LISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSELEDCFKRFLKRDDIDIILI 70 Query: 420 SQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 575 +Q A +IR ++D++ P+PA+LEIPSKDHPYD + DS+L R + +F+ + + Sbjct: 71 NQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRARGMFNPEDL 122
>VATF_MANSE (P31478) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 124 Score = 124 bits (311), Expect = 2e-28 Identities = 51/112 (45%), Positives = 82/112 (73%) Frame = +3 Query: 240 LIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLI 419 LI++I DEDT GFL+ G+G ++ + N+++VD T V +IE+ FK F R+DI I+LI Sbjct: 11 LISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTPVSEIEECFKRFVKRDDIDIILI 70 Query: 420 SQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 575 +Q +A ++R ++D++ P+P++LEIPSKDHPYD + DS+L R K +F+ + + Sbjct: 71 NQNVAELVRHVIDAHTAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPEDL 122
>VATF_YEAST (P39111) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 118 Score = 120 bits (300), Expect = 4e-27 Identities = 63/115 (54%), Positives = 81/115 (70%), Gaps = 3/115 (2%) Frame = +3 Query: 225 ANNSALIAIIADEDTVTGFLMAGVGNV--DLRKKTNYLLVDNKTTVKQIEDAFKEFTA-R 395 A LIA+IADEDT TG L+AG+G + + ++K ++ + KTT ++I D F FT R Sbjct: 2 AEKRTLIAVIADEDTTTGLLLAGIGQITPETQEKNFFVYQEGKTTKEEITDKFNHFTEER 61 Query: 396 EDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLF 560 +DIAI+LI+Q+IA IR VDS+ PAILEIPSKDHPYDP DSVL RV+ LF Sbjct: 62 DDIAILLINQHIAENIRARVDSFTNAFPAILEIPSKDHPYDPEKDSVLKRVRKLF 116
>VATF_NEUCR (Q9Y756) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 124 Score = 117 bits (293), Expect = 3e-26 Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 3/119 (2%) Frame = +3 Query: 213 SNIPANNSALIAIIADEDTVTGFLMAGVGNVDLR--KKTNYLLVDNKTTVKQIEDAFKEF 386 S A + +A+I DED+VTG L+AG+G+V + N+L+VDNKT IE AF F Sbjct: 4 SQADARDRQFLAVIGDEDSVTGLLLAGIGHVTAPPDSQKNFLVVDNKTDNAAIEAAFDRF 63 Query: 387 TA-REDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLF 560 T R+DI IVLI+Q+IA+ IR VD++ P +LEIPSKDHPYDP DSVL RV+ LF Sbjct: 64 TTERKDIGIVLINQHIADRIRHRVDTHTAAFPTVLEIPSKDHPYDPEKDSVLRRVRRLF 122
>VATF_SCHPO (O43046) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 120 Score = 108 bits (269), Expect = 2e-23 Identities = 52/105 (49%), Positives = 76/105 (72%), Gaps = 1/105 (0%) Frame = +3 Query: 240 LIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTA-REDIAIVL 416 L+++I D+DTVTG L+AG G V+ N+ ++ KTT +QI +AF ++T R+DIAIVL Sbjct: 11 LVSVIGDDDTVTGMLLAGTGQVNENGDKNFFIITQKTTDEQIAEAFDDYTTKRKDIAIVL 70 Query: 417 ISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVK 551 I+Q+ A IR ++++ + PA+LEIPSKD PYDP DS+L RV+ Sbjct: 71 INQFAAERIRDRIENHVQAFPAVLEIPSKDDPYDPEKDSILRRVR 115
>VATF1_DROPS (O44091) Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F| subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) (Fragment) Length = 90 Score = 106 bits (264), Expect = 6e-23 Identities = 45/87 (51%), Positives = 64/87 (73%) Frame = +3 Query: 258 DEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLISQYIAN 437 DEDT GFL+ GVG ++ + N+++VD T V ++ED FK F R+DI I+LI+Q A Sbjct: 1 DEDTCVGFLLGGVGEINKNRHPNFMVVDKNTPVSELEDCFKRFLKRDDIDIILINQNCAE 60 Query: 438 MIRFLVDSYNKPIPAILEIPSKDHPYD 518 +IR ++D++ P+PA+LEIPSKDHPYD Sbjct: 61 LIRHVIDAHTSPVPAVLEIPSKDHPYD 87
>VATF2_DROME (Q9VNL3) Probable vacuolar ATP synthase subunit F 2 (EC 3.6.3.14)| (V-ATPase F subunit 2) (Vacuolar proton pump F subunit 2) (V-ATPase 14 kDa subunit 2) Length = 129 Score = 81.6 bits (200), Expect = 2e-15 Identities = 38/68 (55%), Positives = 50/68 (73%) Frame = +3 Query: 348 TTVKQIEDAFKEFTAREDIAIVLISQYIANMIRFLVDSYNKPIPAILEIPSKDHPYDPAS 527 TT KQIE+ FK+F R DI I+LI+Q A+MIR VD++N +P +LEIPSK HPYD + Sbjct: 52 TTPKQIEECFKKFLRRPDIVIILINQVYADMIRPTVDAHNLAVPTVLEIPSKQHPYDSSR 111 Query: 528 DSVLSRVK 551 DS+L R + Sbjct: 112 DSILKRAQ 119
>VATF_PYRKO (Q5JIR4) V-type ATP synthase subunit F (EC 3.6.3.14) (V-type ATPase| subunit F) Length = 102 Score = 47.0 bits (110), Expect = 4e-05 Identities = 26/87 (29%), Positives = 46/87 (52%) Frame = +3 Query: 243 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLIS 422 IA++ D DTV GF +AGV Y + ++++++ E RED+ I+LI+ Sbjct: 3 IAVLGDSDTVLGFRLAGVHEA-------YAFEETPLDIERLKNKLNELIEREDVGIILIT 55 Query: 423 QYIANMIRFLVDSYNKPIPAILEIPSK 503 + +A V+ + +P IL++P K Sbjct: 56 ERLAEK----VEIPDVKLPIILQVPDK 78
>VATF_PYRAB (Q9UXU6) V-type ATP synthase subunit F (EC 3.6.3.14) (V-type ATPase| subunit F) Length = 103 Score = 46.2 bits (108), Expect = 7e-05 Identities = 27/87 (31%), Positives = 46/87 (52%) Frame = +3 Query: 243 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLIS 422 + ++ D DTVTGF +AGV Y ++ ++++ + KE R+D+ I+LI+ Sbjct: 3 VVVMGDSDTVTGFRLAGVHEA-------YEFDFSELSIERARNKLKELVERDDVGIILIT 55 Query: 423 QYIANMIRFLVDSYNKPIPAILEIPSK 503 + +A I D +P IL+IP K Sbjct: 56 ERLAQRIG---DLPQVNLPIILQIPDK 79
>VATF_METTH (O27037) V-type ATP synthase subunit F (EC 3.6.3.14) (V-type ATPase| subunit F) Length = 106 Score = 46.2 bits (108), Expect = 7e-05 Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Frame = +3 Query: 234 SALIAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIV 413 S+ IA++ D DTVTGF + GV + Y++ T + E+ + R+ +I+ Sbjct: 2 SSNIAVVGDRDTVTGFRLGGV-------REGYVV----ETPDEAEETIRNL-IRDGFSII 49 Query: 414 LISQYIANMIRFLVD--SYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSADSV 575 ++++ I + +R ++ + + +P I+EIP K P + +D + +K + + V Sbjct: 50 IVTEKIGDELREFIEETTSSSALPMIIEIPDKTGPSERETDPLRDLIKRVIGVEMV 105
>VATF_DESSY (O06503) V-type ATP synthase subunit F (EC 3.6.3.14) (V-type ATPase| subunit F) Length = 102 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/87 (31%), Positives = 43/87 (49%) Frame = +3 Query: 243 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLIS 422 IA++ D DT GF +AG V Y D ++++ + KE R D+ I+LI+ Sbjct: 3 IAVLGDRDTALGFKLAGAHEV-------YAFEDTPLEMERLRNKLKELVERGDVGIILIT 55 Query: 423 QYIANMIRFLVDSYNKPIPAILEIPSK 503 + A V+ + IP IL++P K Sbjct: 56 ERFAQR----VEIPDVTIPIILQVPDK 78
>VATF_PYRFU (Q8U4A7) V-type ATP synthase subunit F (EC 3.6.3.14) (V-type ATPase| subunit F) Length = 103 Score = 43.9 bits (102), Expect = 4e-04 Identities = 27/87 (31%), Positives = 45/87 (51%) Frame = +3 Query: 243 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLIS 422 I ++ D DTV GF +AGV Y ++ +V++ + +E R+D+ I+LI+ Sbjct: 3 IVVMGDSDTVVGFRLAGVHEA-------YEYDESLESVERARNKLRELLERDDVGIILIT 55 Query: 423 QYIANMIRFLVDSYNKPIPAILEIPSK 503 + +A I L + P IL+IP K Sbjct: 56 ERLAQRIGSLPE---VKFPIILQIPDK 79
>VATF_PYRHO (O57727) V-type ATP synthase subunit F (EC 3.6.3.14) (V-type ATPase| subunit F) Length = 103 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/87 (29%), Positives = 45/87 (51%) Frame = +3 Query: 243 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLIS 422 + I+ D DTV GF +AG+ Y ++ ++++ + KE R+D+ I+LI+ Sbjct: 3 VVIMGDSDTVVGFRLAGIHEA-------YEFDLSELSIERARNKLKELVERDDVGIILIT 55 Query: 423 QYIANMIRFLVDSYNKPIPAILEIPSK 503 + +A I L +P IL+IP K Sbjct: 56 ERLAQKIGELP---QVNLPIILQIPDK 79
>VATF_ARCFU (O29102) V-type ATP synthase subunit F (EC 3.6.3.14) (V-type ATPase| subunit F) Length = 101 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%) Frame = +3 Query: 243 IAIIADEDTVTGFLMAGVGNVDLRKKTNYLLVDNKTTVKQIEDAFKEFTAREDIAIVLIS 422 +A++ D D GF++AG+ ++ Y + ++ VK +ED K R+D+ +V+I Sbjct: 4 LAVVGDPDFTIGFMLAGISDI-------YEVTSDEEIVKAVEDVLK----RDDVGVVIIK 52 Query: 423 QYIANMIRFLVDSYNKPIPAIL--EIPSKDHP 512 Q Y K +P +L EI K P Sbjct: 53 Q-----------EYLKKLPPVLRREIDEKVEP 73
>END4_MYCPN (P75457) Probable endonuclease 4 (EC 3.1.21.2) (Endonuclease IV)| (Endodeoxyribonuclease IV) Length = 286 Score = 33.9 bits (76), Expect = 0.36 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +3 Query: 435 NMIRFLVDSYNKPIPAILEIPSKDHPYDPASDSVLSRVKYLFSA 566 N++RF+ K IP +LE PS H Y + + R++ F A Sbjct: 242 NLMRFIAQPQIKQIPIVLETPSDKHNYPAVYGAEIERIRAWFGA 285
>DEDD_RAT (Q9Z2K0) Death effector domain-containing protein (Death effector| domain-containing testicular molecule) Length = 318 Score = 32.0 bits (71), Expect = 1.4 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = -3 Query: 209 PRHY---CCQKPTGCKESCSRYESRNHRH-GSRRKKERVGDPVVQEKKNMEAKRRVR 51 P HY CC PT + CS+ +R GS+RK+ + P +EK+ + + RVR Sbjct: 146 PPHYPVVCC--PTSGSQMCSKRPARGRTTLGSQRKRRKSVTPDPKEKQTCDIRLRVR 200
>DEDD_MOUSE (Q9Z1L3) Death effector domain-containing protein (DEDPro1)| Length = 318 Score = 32.0 bits (71), Expect = 1.4 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = -3 Query: 209 PRHY---CCQKPTGCKESCSRYESRNHRH-GSRRKKERVGDPVVQEKKNMEAKRRVR 51 P HY CC PT + CS+ +R GS+RK+ + P +EK+ + + RVR Sbjct: 146 PPHYPVVCC--PTSGSQMCSKRPARGRTTLGSQRKRRKSVTPDPKEKQTCDIRLRVR 200
>DEDD_HUMAN (O75618) Death effector domain-containing protein (Death effector| domain-containing testicular molecule) (DEDPro1) (FLDED-1) Length = 318 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = -3 Query: 209 PRHY---CCQKPTGCKESCSRYESRNHRH-GSRRKKERVGDPVVQEKKNMEAKRRVR 51 P HY CC PT + CS+ +R GS+RK+ + P +EK+ + + RVR Sbjct: 146 PPHYPVVCC--PTSGPQMCSKRPARGRATLGSQRKRRKSVTPDPKEKQTCDIRLRVR 200
>SC160_YEAST (P06105) Protein SCP160 (Protein HX)| Length = 1222 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = +3 Query: 351 TVKQIEDAFKEFTAREDIAIVLISQYIANMI---RFLVDSYNKPIPAILEIPSK 503 +VK+ D E T ++ L+S AN+ R LV KPI A++E+PSK Sbjct: 134 SVKKNHDVSVESTLSKNARTFLVSGVAANVHEAKRELVKKLTKPINAVIEVPSK 187
>SCAR2_ARATH (Q5XPJ9) Protein SCAR2 (AtSCAR2) (Protein WAVE4) (Protein| DISTORTED3) (Protein IRREGULAR TRICHOME BRANCH1) Length = 1399 Score = 31.2 bits (69), Expect = 2.4 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = -3 Query: 215 GPPRHYCCQK--PTGCKESCSRYESRNHRHGSRRKKERVGDPVVQEKKNMEAKRRVRRGL 42 GPPR + K +G RY + E D + +EKK+ +AKRR + Sbjct: 139 GPPRLFLLDKFDISGAGACLKRYTDPSFVRLETSSYEESWDDIQREKKSQKAKRRASQWR 198 Query: 41 GAGEPE 24 G PE Sbjct: 199 NGGTPE 204
>VNS1_BTV20 (P32931) Nonstructural protein NS1| Length = 552 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = -3 Query: 587 PIRSNRVSRK*ILHTRKDRITCWIIWMVL---GWDFQYRRDWLVVAIHQKSNHVCNILAD 417 P R + + + + W++ MVL G D Q + +WL+ + +K H+C + Sbjct: 285 PTRDRNIVEARVKRSGDENWQSWLLPMVLVREGLDQQEKWEWLLEYMDRK--HICQLCYL 342 Query: 416 EHNSNILPCS 387 +H+ I CS Sbjct: 343 KHSKQIQTCS 352
>VNS1_BTV1A (P33471) Nonstructural protein NS1| Length = 552 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = -3 Query: 587 PIRSNRVSRK*ILHTRKDRITCWIIWMVL---GWDFQYRRDWLVVAIHQKSNHVCNILAD 417 P R + + + + W++ MVL G D Q + +WL+ + +K H+C + Sbjct: 285 PTRDRNIVEARVKRSGDENWQSWLLPMVLVREGLDQQEKWEWLLEYMDRK--HICQLCYL 342 Query: 416 EHNSNILPCS 387 +H+ I CS Sbjct: 343 KHSKQIQTCS 352
>GLB1_MAIZE (P15590) Globulin-1 S allele precursor (GLB1-S) (7S-like)| Length = 573 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = -3 Query: 179 GCKESCSRYESRNHRHGSRRKKERVGDPVVQEKKNMEAKRRVRRGLGAGE 30 G +E E R RHG R ++ER G +E++ E +R R G G E Sbjct: 513 GHEEREQEEEEREERHGGRGERERHGR---EEREKEEEEREGRHGRGRRE 559
>SEN54_HUMAN (Q7Z6J9) tRNA-splicing endonuclease subunit Sen54 (tRNA-intron| endonuclease Sen54) (HsSen54) Length = 526 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 6/55 (10%) Frame = -3 Query: 194 CQKPTGCKESCSRYESRNHRHGSRRKKERVGDPVVQ------EKKNMEAKRRVRR 48 CQK KE+ SR E +H ++ +++ DP VQ E K + +R+V+R Sbjct: 338 CQKLNQRKENLSRREREHHAEAAQFQEDVNADPEVQRCSSWREYKELLQRRQVQR 392 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,970,992 Number of Sequences: 219361 Number of extensions: 1923116 Number of successful extensions: 6379 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 6048 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6373 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
