ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63f08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463361.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1656 Score = 391 bits (197), Expect = e-105 Identities = 266/289 (92%) Strand = Plus / Plus Query: 18 gagtttcggcgcgccttcaggatgggccgggagacgttcgacatgatctgcgatgcgctc 77 ||||| || ||||| ||| ||||||| || ||||||||||||||||||||||| ||||| Sbjct: 670 gagttccgtcgcgcgttccggatggggcgcgagacgttcgacatgatctgcgaggcgctg 729 Query: 78 ggctccgcggtggctaaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgc 137 |||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 730 ggctccgcggtggccaaggaggacaccatgctccgcgccgccatccccgtgcgccagcgc 789 Query: 138 gtcgccgtctgcatctggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgc 197 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 790 gtcgccgtctgcatctggcgcctcgccacgggcgagccgctccgcctcgtctccaagcgc 849 Query: 198 ttcggcctcggcatctccacatgccacaagctcgtcctcgaggtctgcggggccatcaag 257 ||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||||| Sbjct: 850 ttcggcctcgggatctccacctgccacaagctcgtcctcgaggtgtgcgccgccatcaag 909 Query: 258 tctgtcctcatgccgcgcttcctccaatggcccgatgaggccgccgccg 306 || ||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 910 tccgtcctcatgccgcgcttcctccagtggcccgacgaggccgccgccg 958 Score = 353 bits (178), Expect = 4e-94 Identities = 238/258 (92%) Strand = Plus / Plus Query: 339 ggcgttccgggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaag 398 ||||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 991 ggcgtcccgggcgtgatcggcgccatgtacaccacccacatccccatcatcgcgcccaag 1050 Query: 399 atctccgtcgccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctac 458 ||||| |||||||||||||||||||| || |||||||||||||| |||||||| |||||| Sbjct: 1051 atctcggtcgccgcctacttcaaccgccgccacacggagcgcaaccagaagacgtcctac 1110 Query: 459 tccatcacgctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||| Sbjct: 1111 tccatcacgctccagggggtggtcggccccgacggcgccttcaccgacgtgtgcatcggc 1170 Query: 519 tggccgggctccatgccagacgatcaggtgctcgagaaatccatgctgcaccagcgcgcc 578 |||||||| |||||||| ||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 1171 tggccggggtccatgccggacgaccaggtgctggagaagtccatgctgcaccagcgcgcc 1230 Query: 579 gcggcgggtatgatgcac 596 |||||||| ||||||||| Sbjct: 1231 gcggcggggatgatgcac 1248
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 391 bits (197), Expect = e-105 Identities = 266/289 (92%) Strand = Plus / Plus Query: 18 gagtttcggcgcgccttcaggatgggccgggagacgttcgacatgatctgcgatgcgctc 77 ||||| || ||||| ||| ||||||| || ||||||||||||||||||||||| ||||| Sbjct: 22601492 gagttccgtcgcgcgttccggatggggcgcgagacgttcgacatgatctgcgaggcgctg 22601551 Query: 78 ggctccgcggtggctaaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgc 137 |||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 22601552 ggctccgcggtggccaaggaggacaccatgctccgcgccgccatccccgtgcgccagcgc 22601611 Query: 138 gtcgccgtctgcatctggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgc 197 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 22601612 gtcgccgtctgcatctggcgcctcgccacgggcgagccgctccgcctcgtctccaagcgc 22601671 Query: 198 ttcggcctcggcatctccacatgccacaagctcgtcctcgaggtctgcggggccatcaag 257 ||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||||| Sbjct: 22601672 ttcggcctcgggatctccacctgccacaagctcgtcctcgaggtgtgcgccgccatcaag 22601731 Query: 258 tctgtcctcatgccgcgcttcctccaatggcccgatgaggccgccgccg 306 || ||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 22601732 tccgtcctcatgccgcgcttcctccagtggcccgacgaggccgccgccg 22601780 Score = 353 bits (178), Expect = 4e-94 Identities = 238/258 (92%) Strand = Plus / Plus Query: 339 ggcgttccgggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaag 398 ||||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 22601813 ggcgtcccgggcgtgatcggcgccatgtacaccacccacatccccatcatcgcgcccaag 22601872 Query: 399 atctccgtcgccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctac 458 ||||| |||||||||||||||||||| || |||||||||||||| |||||||| |||||| Sbjct: 22601873 atctcggtcgccgcctacttcaaccgccgccacacggagcgcaaccagaagacgtcctac 22601932 Query: 459 tccatcacgctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||| Sbjct: 22601933 tccatcacgctccagggggtggtcggccccgacggcgccttcaccgacgtgtgcatcggc 22601992 Query: 519 tggccgggctccatgccagacgatcaggtgctcgagaaatccatgctgcaccagcgcgcc 578 |||||||| |||||||| ||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 22601993 tggccggggtccatgccggacgaccaggtgctggagaagtccatgctgcaccagcgcgcc 22602052 Query: 579 gcggcgggtatgatgcac 596 |||||||| ||||||||| Sbjct: 22602053 gcggcggggatgatgcac 22602070 Score = 167 bits (84), Expect = 5e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 51 acgttcgacatgatctgcgatgcgctcggctccgcggtggctaaggaagacaccatgctt 110 |||||||| || ||||||| | ||||| | |||| || || ||||| ||||||||||| Sbjct: 4645943 acgttcgaggtggtctgcgacgagctcgccgccgccgtcgccaaggaggacaccatgctc 4646002 Query: 111 cgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggt 170 ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 4646003 cgcgccgccatcccggtgcgcaagcgcgtcgccgtctgcgtctggcgcctcgccacgggg 4646062 Query: 171 gagccgctccgcctcgtctccaagcgcttcggcctcggcatctccacatgccacaagctc 230 ||||| || | || || |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 4646063 gagcccctgaggctggtgtccaagcgcttcggcctcgggatctccacctgccacaagctc 4646122 Query: 231 gtcctcgaggtctgcg 246 || ||||||||||||| Sbjct: 4646123 gtgctcgaggtctgcg 4646138 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 348 ggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtc 407 |||||| |||| || || |||||||| |||||||| ||||||||||||||| | |||| Sbjct: 4646240 ggcgtcgtcggcgcgatctacaccacccacatccccatcatcgcgcccaagtccaacgtc 4646299 Query: 408 gccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctactccatcacg 467 ||| |||||| |||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct: 4646300 gcctcctactacaaccgccgccacacggagcgcaaccagaagacctcctactccatgacc 4646359 Query: 468 ctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggc 527 ||||| | || |||| | | |||||||||||||||||||||||||||||||||| Sbjct: 4646360 gtccagtgcgtcgtcgactccaccggcgccttcaccgacgtctgcatcggctggccgggg 4646419 Query: 528 tccatgccagacgatcaggtgctcgagaa 556 |||| | ||||| ||||||||||||| Sbjct: 4646420 tccaactccgacgaggaggtgctcgagaa 4646448 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 118 ccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggtgagccgc 177 ||||||| |||| |||||||| ||||||||| ||||||||||| |||||| |||||| Sbjct: 23546266 ccatccctgtgccccagcgcgttgccgtctgcctctggcgcctcaccaccgacaagccgc 23546325 Query: 178 tccgc 182 ||||| Sbjct: 23546326 tccgc 23546330
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 391 bits (197), Expect = e-105 Identities = 266/289 (92%) Strand = Plus / Plus Query: 18 gagtttcggcgcgccttcaggatgggccgggagacgttcgacatgatctgcgatgcgctc 77 ||||| || ||||| ||| ||||||| || ||||||||||||||||||||||| ||||| Sbjct: 117229 gagttccgtcgcgcgttccggatggggcgcgagacgttcgacatgatctgcgaggcgctg 117288 Query: 78 ggctccgcggtggctaaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgc 137 |||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 117289 ggctccgcggtggccaaggaggacaccatgctccgcgccgccatccccgtgcgccagcgc 117348 Query: 138 gtcgccgtctgcatctggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgc 197 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 117349 gtcgccgtctgcatctggcgcctcgccacgggcgagccgctccgcctcgtctccaagcgc 117408 Query: 198 ttcggcctcggcatctccacatgccacaagctcgtcctcgaggtctgcggggccatcaag 257 ||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||||| Sbjct: 117409 ttcggcctcgggatctccacctgccacaagctcgtcctcgaggtgtgcgccgccatcaag 117468 Query: 258 tctgtcctcatgccgcgcttcctccaatggcccgatgaggccgccgccg 306 || ||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 117469 tccgtcctcatgccgcgcttcctccagtggcccgacgaggccgccgccg 117517 Score = 353 bits (178), Expect = 4e-94 Identities = 238/258 (92%) Strand = Plus / Plus Query: 339 ggcgttccgggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaag 398 ||||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 117550 ggcgtcccgggcgtgatcggcgccatgtacaccacccacatccccatcatcgcgcccaag 117609 Query: 399 atctccgtcgccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctac 458 ||||| |||||||||||||||||||| || |||||||||||||| |||||||| |||||| Sbjct: 117610 atctcggtcgccgcctacttcaaccgccgccacacggagcgcaaccagaagacgtcctac 117669 Query: 459 tccatcacgctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||| Sbjct: 117670 tccatcacgctccagggggtggtcggccccgacggcgccttcaccgacgtgtgcatcggc 117729 Query: 519 tggccgggctccatgccagacgatcaggtgctcgagaaatccatgctgcaccagcgcgcc 578 |||||||| |||||||| ||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 117730 tggccggggtccatgccggacgaccaggtgctggagaagtccatgctgcaccagcgcgcc 117789 Query: 579 gcggcgggtatgatgcac 596 |||||||| ||||||||| Sbjct: 117790 gcggcggggatgatgcac 117807
>dbj|AK120510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123H20, full insert sequence Length = 2353 Score = 323 bits (163), Expect = 4e-85 Identities = 226/247 (91%) Strand = Plus / Plus Query: 18 gagtttcggcgcgccttcaggatgggccgggagacgttcgacatgatctgcgatgcgctc 77 ||||| || ||||| ||| ||||||| || ||||||||||||||||||||||| ||||| Sbjct: 865 gagttccgtcgcgcgttccggatggggcgcgagacgttcgacatgatctgcgaggcgctg 924 Query: 78 ggctccgcggtggctaaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgc 137 |||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 925 ggctccgcggtggccaaggaggacaccatgctccgcgccgccatccccgtgcgccagcgc 984 Query: 138 gtcgccgtctgcatctggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgc 197 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 985 gtcgccgtctgcatctggcgcctcgccacgggcgagccgctccgcctcgtctccaagcgc 1044 Query: 198 ttcggcctcggcatctccacatgccacaagctcgtcctcgaggtctgcggggccatcaag 257 ||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||||| Sbjct: 1045 ttcggcctcgggatctccacctgccacaagctcgtcctcgaggtgtgcgccgccatcaag 1104 Query: 258 tctgtcc 264 || |||| Sbjct: 1105 tccgtcc 1111
>ref|XM_476023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1272 Score = 208 bits (105), Expect = 2e-50 Identities = 198/229 (86%) Strand = Plus / Plus Query: 64 tctgcgatgcgctcggctccgcggtggctaaggaagacaccatgcttcgcgcggccatcc 123 ||||||| ||||||| | |||| || || ||||| |||||| || ||||| ||||||| Sbjct: 329 tctgcgacgcgctcgccgccgccgtcgccaaggaggacaccgccctccgcgccgccatcc 388 Query: 124 ccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggtgagccgctccgcc 183 |||| || |||||||||||||||||| |||||||||||||||| || ||||| |||||| Sbjct: 389 ccgtccgccagcgcgtcgccgtctgcgtctggcgcctcgccacgggggagccactccgcg 448 Query: 184 tcgtctccaagcgcttcggcctcggcatctccacatgccacaagctcgtcctcgaggtct 243 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 449 tcgtctccaagcgcttcggcctcggcatctccacctgccacaagctcatcctcgaggtct 508 Query: 244 gcggggccatcaagtctgtcctcatgccgcgcttcctccaatggcccga 292 ||| |||||| |||||||||||||||||||||| |||||||| Sbjct: 509 gcgccgccatccgcaacctcctcatgccgcgcttcctccactggcccga 557 Score = 206 bits (104), Expect = 6e-50 Identities = 170/192 (88%) Strand = Plus / Plus Query: 360 gccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtcgccgcctacttc 419 ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| Sbjct: 625 gccatgtacaccacgcacatccccatcatcgcccccaaggtctccgtcgccgcctacttg 684 Query: 420 aaccgtcggcacacggagcgcaatcagaagacatcctactccatcacgctccagggggtg 479 ||||| || |||||||||||||| || ||||| |||||||||||||| |||||||| || Sbjct: 685 aaccgccgccacacggagcgcaaccacaagacctcctactccatcaccctccagggcgtc 744 Query: 480 gtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggctccatgccagac 539 ||||| || ||| || |||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 745 gtcggccccgacggcaccttcaccgacgtctgcatcgggtggccggggtccatgagcgac 804 Query: 540 gatcaggtgctc 551 || ||||||||| Sbjct: 805 gagcaggtgctc 816
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 208 bits (105), Expect = 2e-50 Identities = 198/229 (86%) Strand = Plus / Minus Query: 64 tctgcgatgcgctcggctccgcggtggctaaggaagacaccatgcttcgcgcggccatcc 123 ||||||| ||||||| | |||| || || ||||| |||||| || ||||| ||||||| Sbjct: 104567 tctgcgacgcgctcgccgccgccgtcgccaaggaggacaccgccctccgcgccgccatcc 104508 Query: 124 ccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggtgagccgctccgcc 183 |||| || |||||||||||||||||| |||||||||||||||| || ||||| |||||| Sbjct: 104507 ccgtccgccagcgcgtcgccgtctgcgtctggcgcctcgccacgggggagccactccgcg 104448 Query: 184 tcgtctccaagcgcttcggcctcggcatctccacatgccacaagctcgtcctcgaggtct 243 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 104447 tcgtctccaagcgcttcggcctcggcatctccacctgccacaagctcatcctcgaggtct 104388 Query: 244 gcggggccatcaagtctgtcctcatgccgcgcttcctccaatggcccga 292 ||| |||||| |||||||||||||||||||||| |||||||| Sbjct: 104387 gcgccgccatccgcaacctcctcatgccgcgcttcctccactggcccga 104339 Score = 206 bits (104), Expect = 6e-50 Identities = 170/192 (88%) Strand = Plus / Minus Query: 360 gccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtcgccgcctacttc 419 ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| Sbjct: 104271 gccatgtacaccacgcacatccccatcatcgcccccaaggtctccgtcgccgcctacttg 104212 Query: 420 aaccgtcggcacacggagcgcaatcagaagacatcctactccatcacgctccagggggtg 479 ||||| || |||||||||||||| || ||||| |||||||||||||| |||||||| || Sbjct: 104211 aaccgccgccacacggagcgcaaccacaagacctcctactccatcaccctccagggcgtc 104152 Query: 480 gtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggctccatgccagac 539 ||||| || ||| || |||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 104151 gtcggccccgacggcaccttcaccgacgtctgcatcgggtggccggggtccatgagcgac 104092 Query: 540 gatcaggtgctc 551 || ||||||||| Sbjct: 104091 gagcaggtgctc 104080
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 208 bits (105), Expect = 2e-50 Identities = 198/229 (86%) Strand = Plus / Minus Query: 64 tctgcgatgcgctcggctccgcggtggctaaggaagacaccatgcttcgcgcggccatcc 123 ||||||| ||||||| | |||| || || ||||| |||||| || ||||| ||||||| Sbjct: 29325910 tctgcgacgcgctcgccgccgccgtcgccaaggaggacaccgccctccgcgccgccatcc 29325851 Query: 124 ccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggtgagccgctccgcc 183 |||| || |||||||||||||||||| |||||||||||||||| || ||||| |||||| Sbjct: 29325850 ccgtccgccagcgcgtcgccgtctgcgtctggcgcctcgccacgggggagccactccgcg 29325791 Query: 184 tcgtctccaagcgcttcggcctcggcatctccacatgccacaagctcgtcctcgaggtct 243 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 29325790 tcgtctccaagcgcttcggcctcggcatctccacctgccacaagctcatcctcgaggtct 29325731 Query: 244 gcggggccatcaagtctgtcctcatgccgcgcttcctccaatggcccga 292 ||| |||||| |||||||||||||||||||||| |||||||| Sbjct: 29325730 gcgccgccatccgcaacctcctcatgccgcgcttcctccactggcccga 29325682 Score = 206 bits (104), Expect = 6e-50 Identities = 170/192 (88%) Strand = Plus / Minus Query: 360 gccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtcgccgcctacttc 419 ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| Sbjct: 29325614 gccatgtacaccacgcacatccccatcatcgcccccaaggtctccgtcgccgcctacttg 29325555 Query: 420 aaccgtcggcacacggagcgcaatcagaagacatcctactccatcacgctccagggggtg 479 ||||| || |||||||||||||| || ||||| |||||||||||||| |||||||| || Sbjct: 29325554 aaccgccgccacacggagcgcaaccacaagacctcctactccatcaccctccagggcgtc 29325495 Query: 480 gtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggctccatgccagac 539 ||||| || ||| || |||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 29325494 gtcggccccgacggcaccttcaccgacgtctgcatcgggtggccggggtccatgagcgac 29325435 Query: 540 gatcaggtgctc 551 || ||||||||| Sbjct: 29325434 gagcaggtgctc 29325423 Score = 133 bits (67), Expect = 7e-28 Identities = 139/163 (85%) Strand = Plus / Minus Query: 93 aaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatc 152 ||||| ||||||| ||| ||||| ||||||||||||| |||||||||||||||||| || Sbjct: 5131533 aaggaggacaccacgctccgcgccgccatccccgtgccccagcgcgtcgccgtctgcctc 5131474 Query: 153 tggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgcttcggcctcggcatc 212 ||||||||||||||||| || ||||||||| || ||| |||||||||||||||||| Sbjct: 5131473 tggcgcctcgccaccggcgacccgctccgcgaggtgtcccgccgcttcggcctcggcatc 5131414 Query: 213 tccacatgccacaagctcgtcctcgaggtctgcggggccatca 255 ||||| ||||||| || ||||| ||||||||| ||||||| Sbjct: 5131413 tccacctgccacagcatcatcctccaggtctgcgccgccatca 5131371 Score = 105 bits (53), Expect = 2e-19 Identities = 131/157 (83%) Strand = Plus / Plus Query: 99 gacaccatgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgc 158 ||||||| ||| ||| | ||||||||||||| |||||||||||||||||| |||||||| Sbjct: 5056768 gacaccacgctccgctccgccatccccgtgccgcagcgcgtcgccgtctgcctctggcgc 5056827 Query: 159 ctcgccaccggtgagccgctccgcctcgtctccaagcgcttcggcctcggcatctccaca 218 ||||||||||| || || |||||| || ||| ||||| ||||||||||||||||| Sbjct: 5056828 ctcgccaccggcgacccactccgcgaggtgtcccgccgctttggcctcggcatctccacc 5056887 Query: 219 tgccacaagctcgtcctcgaggtctgcggggccatca 255 |||||||| || || || ||||||||| ||||||| Sbjct: 5056888 tgccacaacatcatcgtccaggtctgcgccgccatca 5056924 Score = 101 bits (51), Expect = 3e-18 Identities = 135/163 (82%) Strand = Plus / Plus Query: 93 aaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatc 152 ||||| ||||||| ||| ||| | |||||||| |||| ||||||||| ||||||||||| Sbjct: 5092698 aaggaggacaccacgctgcgcaccgccatccctgtgccccagcgcgtcaccgtctgcatc 5092757 Query: 153 tggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgcttcggcctcggcatc 212 ||||||||||||||||| || || |||||| || ||| |||||||||||||||||| Sbjct: 5092758 tggcgcctcgccaccggcgacccactccgcgaggtgtcccgccgcttcggcctcggcatc 5092817 Query: 213 tccacatgccacaagctcgtcctcgaggtctgcggggccatca 255 || || |||||||| || || || ||||||||| ||||||| Sbjct: 5092818 tctacctgccacaacatcatcgtccaggtctgcgccgccatca 5092860 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctggcg 157 ||||||||||||| |||||||||||||||||||||||||| Sbjct: 22595092 gccatccccgtgcaccagcgcgtcgccgtctgcatctggcg 22595052 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 118 ccatccccgtgcgtcagcgcgtcgccgtctgcatctggcg 157 |||||| | |||| |||||||||||||||||||||||||| Sbjct: 22594795 ccatcctcatgcgccagcgcgtcgccgtctgcatctggcg 22594756 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 493 gcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| Sbjct: 5131142 gcgccttcaccgacgtctgcatcggc 5131117 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 493 gcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| Sbjct: 5104104 gcgccttcaccgacgtctgcatcggc 5104129 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 493 gcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| Sbjct: 5057156 gcgccttcaccgacgtctgcatcggc 5057181
>dbj|AK064253.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-C07, full insert sequence Length = 1538 Score = 208 bits (105), Expect = 2e-50 Identities = 198/229 (86%) Strand = Plus / Plus Query: 64 tctgcgatgcgctcggctccgcggtggctaaggaagacaccatgcttcgcgcggccatcc 123 ||||||| ||||||| | |||| || || ||||| |||||| || ||||| ||||||| Sbjct: 405 tctgcgacgcgctcgccgccgccgtcgccaaggaggacaccgccctccgcgccgccatcc 464 Query: 124 ccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggtgagccgctccgcc 183 |||| || |||||||||||||||||| |||||||||||||||| || ||||| |||||| Sbjct: 465 ccgtccgccagcgcgtcgccgtctgcgtctggcgcctcgccacgggggagccactccgcg 524 Query: 184 tcgtctccaagcgcttcggcctcggcatctccacatgccacaagctcgtcctcgaggtct 243 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 525 tcgtctccaagcgcttcggcctcggcatctccacctgccacaagctcatcctcgaggtct 584 Query: 244 gcggggccatcaagtctgtcctcatgccgcgcttcctccaatggcccga 292 ||| |||||| |||||||||||||||||||||| |||||||| Sbjct: 585 gcgccgccatccgcaacctcctcatgccgcgcttcctccactggcccga 633 Score = 198 bits (100), Expect = 1e-47 Identities = 169/192 (88%) Strand = Plus / Plus Query: 360 gccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtcgccgcctacttc 419 ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| Sbjct: 701 gccatgtacaccacgcacatccccatcatcgcccccaaggtctccgtcgccgcctacttg 760 Query: 420 aaccgtcggcacacggagcgcaatcagaagacatcctactccatcacgctccagggggtg 479 ||||| || |||||||||||||| || ||||| |||||||||||||| |||||||| || Sbjct: 761 aaccgccgccacacggagcgcaaccacaagacctcctactccatcaccctccagggcgtc 820 Query: 480 gtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggctccatgccagac 539 ||||| || ||| || |||||||||||| ||||||||| |||||||| |||||| ||| Sbjct: 821 gtcggccccgacggcaccttcaccgacgcctgcatcgggtggccggggtccatgagcgac 880 Query: 540 gatcaggtgctc 551 || ||||||||| Sbjct: 881 gagcaggtgctc 892
>gb|AY109036.1| Zea mays PCO143873 mRNA sequence Length = 1057 Score = 168 bits (85), Expect = 1e-38 Identities = 163/189 (86%) Strand = Plus / Plus Query: 345 ccgggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctcc 404 ||||||||| | || ||||||||||||||||||||||| ||||||||||||||| | | Sbjct: 16 ccgggcgtcgtgggcgccatgtacaccacgcacatccccatcatcgcgcccaaggccaac 75 Query: 405 gtcgccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctactccatc 464 ||||||||||||| |||||| || |||||||||||||| |||||||| |||||||||||| Sbjct: 76 gtcgccgcctactacaaccgccgccacacggagcgcaaccagaagacgtcctactccatc 135 Query: 465 acgctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccg 524 ||| | ||||| || || | | | | | |||||||| ||||||||||||||||||||| Sbjct: 136 acggtgcagggcgtcgtggacgcgggcggtgccttcacggacgtctgcatcggctggccg 195 Query: 525 ggctccatg 533 ||||||||| Sbjct: 196 ggctccatg 204
>ref|NM_189629.1| Oryza sativa (japonica cultivar-group), Ozsa8057 predicted mRNA Length = 1716 Score = 167 bits (84), Expect = 5e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 51 acgttcgacatgatctgcgatgcgctcggctccgcggtggctaaggaagacaccatgctt 110 |||||||| || ||||||| | ||||| | |||| || || ||||| ||||||||||| Sbjct: 757 acgttcgaggtggtctgcgacgagctcgccgccgccgtcgccaaggaggacaccatgctc 816 Query: 111 cgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggt 170 ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 817 cgcgccgccatcccggtgcgcaagcgcgtcgccgtctgcgtctggcgcctcgccacgggg 876 Query: 171 gagccgctccgcctcgtctccaagcgcttcggcctcggcatctccacatgccacaagctc 230 ||||| || | || || |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 877 gagcccctgaggctggtgtccaagcgcttcggcctcgggatctccacctgccacaagctc 936 Query: 231 gtcctcgaggtctgcg 246 || ||||||||||||| Sbjct: 937 gtgctcgaggtctgcg 952 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 348 ggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtc 407 |||||| |||| || || |||||||| |||||||| ||||||||||||||| | |||| Sbjct: 1054 ggcgtcgtcggcgcgatctacaccacccacatccccatcatcgcgcccaagtccaacgtc 1113 Query: 408 gccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctactccatcacg 467 ||| |||||| |||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct: 1114 gcctcctactacaaccgccgccacacggagcgcaaccagaagacctcctactccatgacc 1173 Query: 468 ctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggc 527 ||||| | || |||| | | |||||||||||||||||||||||||||||||||| Sbjct: 1174 gtccagtgcgtcgtcgactccaccggcgccttcaccgacgtctgcatcggctggccgggg 1233 Query: 528 tccatgccagacgatcaggtgctcgagaa 556 |||| | ||||| ||||||||||||| Sbjct: 1234 tccaactccgacgaggaggtgctcgagaa 1262
>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512G09 Length = 146921 Score = 167 bits (84), Expect = 5e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 51 acgttcgacatgatctgcgatgcgctcggctccgcggtggctaaggaagacaccatgctt 110 |||||||| || ||||||| | ||||| | |||| || || ||||| ||||||||||| Sbjct: 6188 acgttcgaggtggtctgcgacgagctcgccgccgccgtcgccaaggaggacaccatgctc 6247 Query: 111 cgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggt 170 ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 6248 cgcgccgccatcccggtgcgcaagcgcgtcgccgtctgcgtctggcgcctcgccacgggg 6307 Query: 171 gagccgctccgcctcgtctccaagcgcttcggcctcggcatctccacatgccacaagctc 230 ||||| || | || || |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 6308 gagcccctgaggctggtgtccaagcgcttcggcctcgggatctccacctgccacaagctc 6367 Query: 231 gtcctcgaggtctgcg 246 || ||||||||||||| Sbjct: 6368 gtgctcgaggtctgcg 6383 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 348 ggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtc 407 |||||| |||| || || |||||||| |||||||| ||||||||||||||| | |||| Sbjct: 6485 ggcgtcgtcggcgcgatctacaccacccacatccccatcatcgcgcccaagtccaacgtc 6544 Query: 408 gccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctactccatcacg 467 ||| |||||| |||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct: 6545 gcctcctactacaaccgccgccacacggagcgcaaccagaagacctcctactccatgacc 6604 Query: 468 ctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggc 527 ||||| | || |||| | | |||||||||||||||||||||||||||||||||| Sbjct: 6605 gtccagtgcgtcgtcgactccaccggcgccttcaccgacgtctgcatcggctggccgggg 6664 Query: 528 tccatgccagacgatcaggtgctcgagaa 556 |||| | ||||| ||||||||||||| Sbjct: 6665 tccaactccgacgaggaggtgctcgagaa 6693
>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695A04 Length = 158133 Score = 167 bits (84), Expect = 5e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 51 acgttcgacatgatctgcgatgcgctcggctccgcggtggctaaggaagacaccatgctt 110 |||||||| || ||||||| | ||||| | |||| || || ||||| ||||||||||| Sbjct: 53159 acgttcgaggtggtctgcgacgagctcgccgccgccgtcgccaaggaggacaccatgctc 53218 Query: 111 cgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggt 170 ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 53219 cgcgccgccatcccggtgcgcaagcgcgtcgccgtctgcgtctggcgcctcgccacgggg 53278 Query: 171 gagccgctccgcctcgtctccaagcgcttcggcctcggcatctccacatgccacaagctc 230 ||||| || | || || |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 53279 gagcccctgaggctggtgtccaagcgcttcggcctcgggatctccacctgccacaagctc 53338 Query: 231 gtcctcgaggtctgcg 246 || ||||||||||||| Sbjct: 53339 gtgctcgaggtctgcg 53354 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 348 ggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtc 407 |||||| |||| || || |||||||| |||||||| ||||||||||||||| | |||| Sbjct: 53456 ggcgtcgtcggcgcgatctacaccacccacatccccatcatcgcgcccaagtccaacgtc 53515 Query: 408 gccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctactccatcacg 467 ||| |||||| |||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct: 53516 gcctcctactacaaccgccgccacacggagcgcaaccagaagacctcctactccatgacc 53575 Query: 468 ctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggc 527 ||||| | || |||| | | |||||||||||||||||||||||||||||||||| Sbjct: 53576 gtccagtgcgtcgtcgactccaccggcgccttcaccgacgtctgcatcggctggccgggg 53635 Query: 528 tccatgccagacgatcaggtgctcgagaa 556 |||| | ||||| ||||||||||||| Sbjct: 53636 tccaactccgacgaggaggtgctcgagaa 53664
>dbj|AK106168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B09, full insert sequence Length = 1205 Score = 167 bits (84), Expect = 5e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 51 acgttcgacatgatctgcgatgcgctcggctccgcggtggctaaggaagacaccatgctt 110 |||||||| || ||||||| | ||||| | |||| || || ||||| ||||||||||| Sbjct: 192 acgttcgaggtggtctgcgacgagctcgccgccgccgtcgccaaggaggacaccatgctc 251 Query: 111 cgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggt 170 ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 252 cgcgccgccatcccggtgcgcaagcgcgtcgccgtctgcgtctggcgcctcgccacgggg 311 Query: 171 gagccgctccgcctcgtctccaagcgcttcggcctcggcatctccacatgccacaagctc 230 ||||| || | || || |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 312 gagcccctgaggctggtgtccaagcgcttcggcctcgggatctccacctgccacaagctc 371 Query: 231 gtcctcgaggtctgcg 246 || ||||||||||||| Sbjct: 372 gtgctcgaggtctgcg 387 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 348 ggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtc 407 |||||| |||| || || |||||||| |||||||| ||||||||||||||| | |||| Sbjct: 489 ggcgtcgtcggcgcgatctacaccacccacatccccatcatcgcgcccaagtccaacgtc 548 Query: 408 gccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctactccatcacg 467 ||| |||||| |||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct: 549 gcctcctactacaaccgccgccacacggagcgcaaccagaagacctcctactccatgacc 608 Query: 468 ctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggc 527 ||||| | || |||| | | |||||||||||||||||||||||||||||||||| Sbjct: 609 gtccagtgcgtcgtcgactccaccggcgccttcaccgacgtctgcatcggctggccgggg 668 Query: 528 tccatgccagacgatcaggtgctcgagaa 556 |||| | ||||| ||||||||||||| Sbjct: 669 tccaactccgacgaggaggtgctcgagaa 697
>dbj|AK105331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C05, full insert sequence Length = 1182 Score = 167 bits (84), Expect = 5e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 51 acgttcgacatgatctgcgatgcgctcggctccgcggtggctaaggaagacaccatgctt 110 |||||||| || ||||||| | ||||| | |||| || || ||||| ||||||||||| Sbjct: 510 acgttcgaggtggtctgcgacgagctcgccgccgccgtcgccaaggaggacaccatgctc 569 Query: 111 cgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggt 170 ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 570 cgcgccgccatcccggtgcgcaagcgcgtcgccgtctgcgtctggcgcctcgccacgggg 629 Query: 171 gagccgctccgcctcgtctccaagcgcttcggcctcggcatctccacatgccacaagctc 230 ||||| || | || || |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 630 gagcccctgaggctggtgtccaagcgcttcggcctcgggatctccacctgccacaagctc 689 Query: 231 gtcctcgaggtctgcg 246 || ||||||||||||| Sbjct: 690 gtgctcgaggtctgcg 705 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 348 ggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtc 407 |||||| |||| || || |||||||| |||||||| ||||||||||||||| | |||| Sbjct: 807 ggcgtcgtcggcgcgatctacaccacccacatccccatcatcgcgcccaagtccaacgtc 866 Query: 408 gccgcctacttcaaccg 424 ||| |||||| |||||| Sbjct: 867 gcctcctactacaaccg 883
>dbj|AK105323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G12, full insert sequence Length = 1523 Score = 167 bits (84), Expect = 5e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 51 acgttcgacatgatctgcgatgcgctcggctccgcggtggctaaggaagacaccatgctt 110 |||||||| || ||||||| | ||||| | |||| || || ||||| ||||||||||| Sbjct: 510 acgttcgaggtggtctgcgacgagctcgccgccgccgtcgccaaggaggacaccatgctc 569 Query: 111 cgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggt 170 ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 570 cgcgccgccatcccggtgcgcaagcgcgtcgccgtctgcgtctggcgcctcgccacgggg 629 Query: 171 gagccgctccgcctcgtctccaagcgcttcggcctcggcatctccacatgccacaagctc 230 ||||| || | || || |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 630 gagcccctgaggctggtgtccaagcgcttcggcctcgggatctccacctgccacaagctc 689 Query: 231 gtcctcgaggtctgcg 246 || ||||||||||||| Sbjct: 690 gtgctcgaggtctgcg 705 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 348 ggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtc 407 |||||| |||| || || |||||||| |||||||| ||||||||||||||| | |||| Sbjct: 807 ggcgtcgtcggcgcgatctacaccacccacatccccatcatcgcgcccaagtccaacgtc 866 Query: 408 gccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctactccatcacg 467 ||| |||||| |||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct: 867 gcctcctactacaaccgccgccacacggagcgcaaccagaagacctcctactccatgacc 926 Query: 468 ctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggc 527 ||||| | || |||| | | |||||||||||||||||||||||||||||||||| Sbjct: 927 gtccagtgcgtcgtcgactccaccggcgccttcaccgacgtctgcatcggctggccgggg 986 Query: 528 tccatgccagacgatcaggtgctcgagaa 556 |||| | ||||| ||||||||||||| Sbjct: 987 tccaactccgacgaggaggtgctcgagaa 1015
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 133 bits (67), Expect = 7e-28 Identities = 139/163 (85%) Strand = Plus / Minus Query: 93 aaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatc 152 ||||| ||||||| ||| ||||| ||||||||||||| |||||||||||||||||| || Sbjct: 46036 aaggaggacaccacgctccgcgccgccatccccgtgccccagcgcgtcgccgtctgcctc 45977 Query: 153 tggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgcttcggcctcggcatc 212 ||||||||||||||||| || ||||||||| || ||| |||||||||||||||||| Sbjct: 45976 tggcgcctcgccaccggcgacccgctccgcgaggtgtcccgccgcttcggcctcggcatc 45917 Query: 213 tccacatgccacaagctcgtcctcgaggtctgcggggccatca 255 ||||| ||||||| || ||||| ||||||||| ||||||| Sbjct: 45916 tccacctgccacagcatcatcctccaggtctgcgccgccatca 45874 Score = 101 bits (51), Expect = 3e-18 Identities = 135/163 (82%) Strand = Plus / Plus Query: 93 aaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatc 152 ||||| ||||||| ||| ||| | |||||||| |||| ||||||||| ||||||||||| Sbjct: 7201 aaggaggacaccacgctgcgcaccgccatccctgtgccccagcgcgtcaccgtctgcatc 7260 Query: 153 tggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgcttcggcctcggcatc 212 ||||||||||||||||| || || |||||| || ||| |||||||||||||||||| Sbjct: 7261 tggcgcctcgccaccggcgacccactccgcgaggtgtcccgccgcttcggcctcggcatc 7320 Query: 213 tccacatgccacaagctcgtcctcgaggtctgcggggccatca 255 || || |||||||| || || || ||||||||| ||||||| Sbjct: 7321 tctacctgccacaacatcatcgtccaggtctgcgccgccatca 7363 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 493 gcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| Sbjct: 45645 gcgccttcaccgacgtctgcatcggc 45620 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 493 gcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| Sbjct: 18607 gcgccttcaccgacgtctgcatcggc 18632
>dbj|AK120573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134I11, full insert sequence Length = 822 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 348 ggcgtcatcggagccatgtacaccacgcacatccctatcatcgcgcccaagatctccgtc 407 |||||| |||| || || |||||||| |||||||| ||||||||||||||| | |||| Sbjct: 153 ggcgtcgtcggcgcgatctacaccacccacatccccatcatcgcgcccaagtccaacgtc 212 Query: 408 gccgcctacttcaaccgtcggcacacggagcgcaatcagaagacatcctactccatcacg 467 ||| |||||| |||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct: 213 gcctcctactacaaccgccgccacacggagcgcaaccagaagacctcctactccatgacc 272 Query: 468 ctccagggggtggtcggtcctgaccgcgccttcaccgacgtctgcatcggctggccgggc 527 ||||| | || |||| | | |||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtgcgtcgtcgactccaccggcgccttcaccgacgtctgcatcggctggccgggg 332 Query: 528 tccatgccagacgatcaggtgctcgagaa 556 |||| | ||||| ||||||||||||| Sbjct: 333 tccaactccgacgaggaggtgctcgagaa 361 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 196 gcttcggcctcggcatctccacatgccacaagctcgtcctcgaggtctgcg 246 ||||||||||||| |||||||| |||||||||||||| ||||||||||||| Sbjct: 1 gcttcggcctcgggatctccacctgccacaagctcgtgctcgaggtctgcg 51
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 105 bits (53), Expect = 2e-19 Identities = 131/157 (83%) Strand = Plus / Plus Query: 99 gacaccatgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgc 158 ||||||| ||| ||| | ||||||||||||| |||||||||||||||||| |||||||| Sbjct: 151353 gacaccacgctccgctccgccatccccgtgccgcagcgcgtcgccgtctgcctctggcgc 151412 Query: 159 ctcgccaccggtgagccgctccgcctcgtctccaagcgcttcggcctcggcatctccaca 218 ||||||||||| || || |||||| || ||| ||||| ||||||||||||||||| Sbjct: 151413 ctcgccaccggcgacccactccgcgaggtgtcccgccgctttggcctcggcatctccacc 151472 Query: 219 tgccacaagctcgtcctcgaggtctgcggggccatca 255 |||||||| || || || ||||||||| ||||||| Sbjct: 151473 tgccacaacatcatcgtccaggtctgcgccgccatca 151509 Score = 101 bits (51), Expect = 3e-18 Identities = 135/163 (82%) Strand = Plus / Plus Query: 93 aaggaagacaccatgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgtctgcatc 152 ||||| ||||||| ||| ||| | |||||||| |||| ||||||||| ||||||||||| Sbjct: 187283 aaggaggacaccacgctgcgcaccgccatccctgtgccccagcgcgtcaccgtctgcatc 187342 Query: 153 tggcgcctcgccaccggtgagccgctccgcctcgtctccaagcgcttcggcctcggcatc 212 ||||||||||||||||| || || |||||| || ||| |||||||||||||||||| Sbjct: 187343 tggcgcctcgccaccggcgacccactccgcgaggtgtcccgccgcttcggcctcggcatc 187402 Query: 213 tccacatgccacaagctcgtcctcgaggtctgcggggccatca 255 || || |||||||| || || || ||||||||| ||||||| Sbjct: 187403 tctacctgccacaacatcatcgtccaggtctgcgccgccatca 187445 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 493 gcgccttcaccgacgtctgcatcggc 518 |||||||||||||||||||||||||| Sbjct: 151741 gcgccttcaccgacgtctgcatcggc 151766
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 87 gtggctaaggaagacacc-atgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgt 145 ||||| ||||| |||||| ||||| ||||| ||||||||||||| ||||| |||||||| Sbjct: 30061756 gtggccaaggaggacacccatgctccgcgcctccatccccgtgcgccagcgtgtcgccgt 30061697 Query: 146 ctgcatctggcg 157 |||||||||||| Sbjct: 30061696 ctgcatctggcg 30061685 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctgg 155 |||||||||||||| |||||||||||| ||||||||||| Sbjct: 9167809 gccatccccgtgcgccagcgcgtcgccatctgcatctgg 9167847 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatct 153 |||||||| ||||| |||||||||||||||||||||| Sbjct: 30062368 gccatccctgtgcgccagcgcgtcgccgtctgcatct 30062332 Score = 48.1 bits (24), Expect = 0.034 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 87 gtggctaaggaagacacc-atgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgt 145 ||||| ||||| |||||| |||| ||||| |||||||| |||| |||||| ||||||| Sbjct: 9168046 gtggccaaggaggacacccatgccccgcgccgccatccctatgcgccagcgcatcgccgt 9168105 Query: 146 ctgcatctggcg 157 ||||||||||| Sbjct: 9168106 ttgcatctggcg 9168117 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctg 148 ||||||||||| || |||| |||||||||||| Sbjct: 1111640 gccatccccgtccgccagcacgtcgccgtctg 1111609
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 71.9 bits (36), Expect = 2e-09 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 87 gtggctaaggaagacacc-atgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgt 145 ||||| ||||| |||||| ||||| ||||| ||||||||||||| ||||| |||||||| Sbjct: 162289 gtggccaaggaggacacccatgctccgcgcctccatccccgtgcgccagcgtgtcgccgt 162348 Query: 146 ctgcatctggcg 157 |||||||||||| Sbjct: 162349 ctgcatctggcg 162360 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatct 153 |||||||| ||||| |||||||||||||||||||||| Sbjct: 161677 gccatccctgtgcgccagcgcgtcgccgtctgcatct 161713
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 87 gtggctaaggaagacacc-atgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgt 145 ||||| ||||| |||||| ||||| ||||| ||||||||||||| ||||| |||||||| Sbjct: 45995 gtggccaaggaggacacccatgctccgcgcctccatccccgtgcgccagcgtgtcgccgt 46054 Query: 146 ctgcatctggcg 157 |||||||||||| Sbjct: 46055 ctgcatctggcg 46066 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatct 153 |||||||| ||||| |||||||||||||||||||||| Sbjct: 45383 gccatccctgtgcgccagcgcgtcgccgtctgcatct 45419
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 87 gtggctaaggaagacacc-atgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgt 145 ||||| ||||| |||||| ||||| ||||| ||||||||||||| ||||| |||||||| Sbjct: 30153178 gtggccaaggaggacacccatgctccgcgcctccatccccgtgcgccagcgtgtcgccgt 30153119 Query: 146 ctgcatctggcg 157 |||||||||||| Sbjct: 30153118 ctgcatctggcg 30153107 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctgg 155 |||||||||||||| |||||||||||| ||||||||||| Sbjct: 9165642 gccatccccgtgcgccagcgcgtcgccatctgcatctgg 9165680 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatct 153 |||||||| ||||| |||||||||||||||||||||| Sbjct: 30153790 gccatccctgtgcgccagcgcgtcgccgtctgcatct 30153754 Score = 48.1 bits (24), Expect = 0.034 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 87 gtggctaaggaagacacc-atgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgt 145 ||||| ||||| |||||| |||| ||||| |||||||| |||| |||||| ||||||| Sbjct: 9165879 gtggccaaggaggacacccatgccccgcgccgccatccctatgcgccagcgcatcgccgt 9165938 Query: 146 ctgcatctggcg 157 ||||||||||| Sbjct: 9165939 ttgcatctggcg 9165950 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctg 148 ||||||||||| || |||| |||||||||||| Sbjct: 1111638 gccatccccgtccgccagcacgtcgccgtctg 1111607
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctggcg 157 ||||||||||||| |||||||||||||||||||||||||| Sbjct: 7630 gccatccccgtgcaccagcgcgtcgccgtctgcatctggcg 7590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 118 ccatccccgtgcgtcagcgcgtcgccgtctgcatctggcg 157 |||||| | |||| |||||||||||||||||||||||||| Sbjct: 7333 ccatcctcatgcgccagcgcgtcgccgtctgcatctggcg 7294
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctggcg 157 ||||||||||||| |||||||||||||||||||||||||| Sbjct: 90142 gccatccccgtgcaccagcgcgtcgccgtctgcatctggcg 90102 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 118 ccatccccgtgcgtcagcgcgtcgccgtctgcatctggcg 157 |||||| | |||| |||||||||||||||||||||||||| Sbjct: 89845 ccatcctcatgcgccagcgcgtcgccgtctgcatctggcg 89806
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctgg 155 |||||||||||||| |||||||||||| ||||||||||| Sbjct: 118582 gccatccccgtgcgccagcgcgtcgccatctgcatctgg 118544 Score = 48.1 bits (24), Expect = 0.034 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 87 gtggctaaggaagacacc-atgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgt 145 ||||| ||||| |||||| |||| ||||| |||||||| |||| |||||| ||||||| Sbjct: 118345 gtggccaaggaggacacccatgccccgcgccgccatccctatgcgccagcgcatcgccgt 118286 Query: 146 ctgcatctggcg 157 ||||||||||| Sbjct: 118285 ttgcatctggcg 118274
>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0016G06, complete sequence Length = 119910 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctgg 155 |||||||||||||| |||||||||||| ||||||||||| Sbjct: 110989 gccatccccgtgcgccagcgcgtcgccatctgcatctgg 111027 Score = 48.1 bits (24), Expect = 0.034 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 87 gtggctaaggaagacacc-atgcttcgcgcggccatccccgtgcgtcagcgcgtcgccgt 145 ||||| ||||| |||||| |||| ||||| |||||||| |||| |||||| ||||||| Sbjct: 111226 gtggccaaggaggacacccatgccccgcgccgccatccctatgcgccagcgcatcgccgt 111285 Query: 146 ctgcatctggcg 157 ||||||||||| Sbjct: 111286 ttgcatctggcg 111297
>ref|XM_463393.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 118 ccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggtgagccgc 177 ||||||| |||| |||||||| ||||||||| ||||||||||| |||||| |||||| Sbjct: 775 ccatccctgtgccccagcgcgttgccgtctgcctctggcgcctcaccaccgacaagccgc 716 Query: 178 tccgc 182 ||||| Sbjct: 715 tccgc 711
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 118 ccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggtgagccgc 177 ||||||| |||| |||||||| ||||||||| ||||||||||| |||||| |||||| Sbjct: 8965 ccatccctgtgccccagcgcgttgccgtctgcctctggcgcctcaccaccgacaagccgc 9024 Query: 178 tccgc 182 ||||| Sbjct: 9025 tccgc 9029
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 118 ccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccggtgagccgc 177 ||||||| |||| |||||||| ||||||||| ||||||||||| |||||| |||||| Sbjct: 109571 ccatccctgtgccccagcgcgttgccgtctgcctctggcgcctcaccaccgacaagccgc 109630 Query: 178 tccgc 182 ||||| Sbjct: 109631 tccgc 109635
>ref|XM_475384.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 118 ccatccccgtgcgtcagcgcgtcgccgtctgcatctggcg 157 |||||| | |||| |||||||||||||||||||||||||| Sbjct: 128 ccatcctcatgcgccagcgcgtcgccgtctgcatctggcg 167
>dbj|AP006407.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT23O19, TM0297a, complete sequence Length = 61781 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 120 atccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgccaccgg 169 |||||||| || |||||||||||||||||||| ||| | || |||||||| Sbjct: 31142 atccccgtccgccagcgcgtcgccgtctgcatatggaggcttgccaccgg 31093
>ref|XM_467257.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgcca 165 ||||||||||| || |||||| || |||| ||| ||||||||||||||| Sbjct: 340 gccatccccgtccgccagcgcatcaccgtatgcgtctggcgcctcgcca 388
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgcca 165 ||||||||||| || |||||| || |||| ||| ||||||||||||||| Sbjct: 28504808 gccatccccgtccgccagcgcatcaccgtatgcgtctggcgcctcgcca 28504856
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgcca 165 ||||||||||| || |||||| || |||| ||| ||||||||||||||| Sbjct: 128929 gccatccccgtccgccagcgcatcaccgtatgcgtctggcgcctcgcca 128977
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctgcatctggcgcctcgcca 165 ||||||||||| || |||||| || |||| ||| ||||||||||||||| Sbjct: 73649 gccatccccgtccgccagcgcatcaccgtatgcgtctggcgcctcgcca 73697
>gb|AE004961.1| Pseudomonas aeruginosa PAO1, section 522 of 529 of the complete genome Length = 10766 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 cgatgcgctcggctccgcggtgg 90 ||||||||||||||||||||||| Sbjct: 7447 cgatgcgctcggctccgcggtgg 7469
>gb|AE009034.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 60 of 256 of the complete sequence Length = 9948 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 gctgcaccagcgcgccgcggc 583 ||||||||||||||||||||| Sbjct: 9135 gctgcaccagcgcgccgcggc 9115
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 566 gcaccagcgcgccgcggcggg 586 ||||||||||||||||||||| Sbjct: 2812623 gcaccagcgcgccgcggcggg 2812603
>gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179164 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgccttcaggatgggccggga 49 ||||||||||||||||||||| Sbjct: 74723 cgccttcaggatgggccggga 74703
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 gctgcaccagcgcgccgcggc 583 ||||||||||||||||||||| Sbjct: 658125 gctgcaccagcgcgccgcggc 658105 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tctgcatcggctggccgggc 527 |||||||||||||||||||| Sbjct: 1446134 tctgcatcggctggccgggc 1446115
>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete sequence Length = 289141 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 cgccttcaggatgggccggga 49 ||||||||||||||||||||| Sbjct: 72767 cgccttcaggatgggccggga 72787
>ref|XM_958160.1| Neurospora crassa OR74A ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR (NCU05430.1) partial mRNA Length = 1563 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 gccacaagctcgtcctcgaggtct 243 |||| ||||||||||||||||||| Sbjct: 245 gccagaagctcgtcctcgaggtct 268
>ref|XM_325284.1| Neurospora crassa OR74A ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR (NCU05430.1) partial mRNA Length = 1563 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 gccacaagctcgtcctcgaggtct 243 |||| ||||||||||||||||||| Sbjct: 245 gccagaagctcgtcctcgaggtct 268
>gb|AE009105.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 131 of 256 of the complete sequence Length = 13124 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tctgcatcggctggccgggc 527 |||||||||||||||||||| Sbjct: 5519 tctgcatcggctggccgggc 5500
>gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 map q32, complete sequence Length = 137003 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 taaggaagacaccatgcttc 111 |||||||||||||||||||| Sbjct: 85753 taaggaagacaccatgcttc 85734
>emb|BX640506.12| Zebrafish DNA sequence from clone DKEY-271E14 in linkage group 12, complete sequence Length = 196667 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tctccacatgccacaagctc 230 |||||||||||||||||||| Sbjct: 195373 tctccacatgccacaagctc 195392
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cgatgaggccgccgccggca 309 |||||||||||||||||||| Sbjct: 2644142 cgatgaggccgccgccggca 2644161
>emb|X53720.1|NCF1ATPB Neurospora crassa mRNA for mitochondrial F(1)-ATPase beta-subunit precursor Length = 1722 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 gccacaagctcgtcctcgaggtct 243 |||| ||||||||||||||||||| Sbjct: 272 gccagaagctcgtcctcgaggtct 295
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gcccgatgaggccgccgccg 306 |||||||||||||||||||| Sbjct: 145374 gcccgatgaggccgccgccg 145393
>emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BAC clone B8B20 Length = 86476 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 gccacaagctcgtcctcgaggtct 243 |||| ||||||||||||||||||| Sbjct: 59432 gccagaagctcgtcctcgaggtct 59409
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cgtcgccgcctacttcaacc 423 |||||||||||||||||||| Sbjct: 1209453 cgtcgccgcctacttcaacc 1209472 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgtgcgtcagcgcgtcgccg 144 |||||||||||||||||||| Sbjct: 1173456 cgtgcgtcagcgcgtcgccg 1173437
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 117 gccatccccgtgcgtcagcgcgtcgccgtctg 148 ||||||||||| || |||| |||||||||||| Sbjct: 15344 gccatccccgtccgccagcacgtcgccgtctg 15313
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ccaagcgcttcggcctcggc 209 |||||||||||||||||||| Sbjct: 2486744 ccaagcgcttcggcctcggc 2486763
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 gcaccagcgcgccgcggcgg 585 |||||||||||||||||||| Sbjct: 1189377 gcaccagcgcgccgcggcgg 1189396
>gb|AF123319.1|AF123319 Streptomyces coelicolor hypothetical protein gene, partial cds; FtsI (ftsI) gene, complete cds; and UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase MurE (murE) gene, partial cds Length = 2951 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcccgatgaggccgccgccg 306 |||||||||||||||||||| Sbjct: 76 gcccgatgaggccgccgccg 57
>gb|M84192.1|NEUATPB N.crassa mitochondrial ATPase beta-subunit (ATP-2) gene, complete cds Length = 3755 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 gccacaagctcgtcctcgaggtct 243 |||| ||||||||||||||||||| Sbjct: 1812 gccagaagctcgtcctcgaggtct 1835
>gb|AC162441.11| Mus musculus chromosome 1, clone RP23-2E23, complete sequence Length = 225487 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 catctccacatgccacaagc 228 |||||||||||||||||||| Sbjct: 159307 catctccacatgccacaagc 159288 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,376,695 Number of Sequences: 3902068 Number of extensions: 3376695 Number of successful extensions: 64239 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62799 Number of HSP's gapped (non-prelim): 1440 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
