>CH602_MYCLE (P09239) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
           (65 kDa antigen)
          Length = 540

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +2

Query: 236 MAGQWVPETQENEAVFDALREAYRLLVSKHFSTIQDWISVLVRV 367
           ++G +V + +  EAV   L E Y LLVS   ST++D + +L +V
Sbjct: 197 ISGYFVTDAERQEAV---LEEPYILLVSSKVSTVKDLLPLLEKV 237

>APOL3_HUMAN (O95236) Apolipoprotein-L3 (Apolipoprotein L-III) (ApoL-III)|
           (TNF-inducible protein CG12-1) (CG12_1)
          Length = 402

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 23/69 (33%), Positives = 35/69 (50%)
 Frame = +2

Query: 284 DALREAYRLLVSKHFSTIQDWISVLVRVNLADNRFRDSALKEFIDVKNEIRAVRGQCNEL 463
           DAL EA + L  + ++ I+D       V   D +FR+  LKEF  VK +I+    +   L
Sbjct: 121 DALYEALKKL--RTYAAIEDEY-----VQQKDEQFREWFLKEFPQVKRKIQESIEKLRAL 173

Query: 464 GLDLDNVHR 490
              ++ VHR
Sbjct: 174 ANGIEEVHR 182

>KPBA_CAEEL (P34335) Probable phosphorylase b kinase alpha regulatory chain|
            (Phosphorylase kinase alpha subunit)
          Length = 1226

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +3

Query: 306  GSLYRSISAPFRIGYLCLLGSILQIIASEIPR*RNSSMLRMKYVL*EASAMSLVSILIMF 485
            GSL R+    F   +   +G I+Q++ASE+ R RN S       L   S   L S++   
Sbjct: 922  GSLVRTEPKLFLEMFRLRIGLIIQVLASELSRLRNISGAEAAETLLTVSPFELKSMIFSL 981

Query: 486  IGRRM 500
            +  R+
Sbjct: 982  LSGRL 986

>CH60_TSUPA (Q9AFA5) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock protein 60)
          Length = 540

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +2

Query: 236 MAGQWVPETQENEAVFDALREAYRLLVSKHFSTIQDWISVLVRV 367
           ++G +  + +  EAV   L +AY LLVS   ST++D + +L +V
Sbjct: 198 ISGYFATDAERQEAV---LEDAYILLVSSKISTVKDLLPLLEKV 238

>TRXB_MYCPU (Q98PK9) Thioredoxin reductase (EC 1.8.1.9) (TRXR)|
          Length = 307

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -2

Query: 475 KIETKLIALAS----HSTYFILNIDEFLQRGISEAIICKIDPNKHRYPILNG 332
           KI+ K + +AS         ILN DEF  RG+S  +IC      H   I+ G
Sbjct: 104 KIQAKSVIIASGMVSRKPREILNYDEFENRGVSYCVICDGPMYGHNPAIIIG 155

>COLA_VIBPA (Q56696) Microbial collagenase precursor (EC 3.4.24.3) (prtVp)|
          Length = 816

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 248 WVPETQENEAVFDALREAYRLLVSKHFSTIQDWISVLVRV 367
           W  +T  N  VF+ALRE  RLL S    T +  ++V+ +V
Sbjct: 234 WALDTDANFIVFNALRETGRLLASPDQETKRKALAVMQQV 273

>KCY_MYCGE (P47572) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine|
           monophosphate kinase) (CMP kinase)
          Length = 217

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 13/66 (19%)
 Frame = +2

Query: 347 ISVLVRVNLADNR-------------FRDSALKEFIDVKNEIRAVRGQCNELGLDLDNVH 487
           I+V+ +  LA+N+              +++ LK F+D K EIRA R +  ++G+ L N  
Sbjct: 102 IAVIKQQKLAENKNIVMDGRDIGTVVLKNAQLKFFLDAKVEIRAQR-RLQDMGISLSNEK 160

Query: 488 RKKDVL 505
           + K+++
Sbjct: 161 KLKELI 166

>ATG3_NEUCR (Q7SDY2) Autophagy-related protein 3 (Autophagy-related E2-like|
           conjugation enzyme atg-3)
          Length = 352

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 193 DCFDGDAEHQDSIVDGRAMGARDSG 267
           D F GDA H++++V+G   GA D G
Sbjct: 84  DDFAGDAGHEEALVEGNKGGADDDG 108

>CH602_MYCTU (P0A520) 60 kDa chaperonin 2 (Protein Cpn60-2) (groEL protein 2)|
           (65 kDa antigen) (Heat shock protein 65) (Cell wall
           protein A) (Antigen A)
          Length = 539

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +2

Query: 236 MAGQWVPETQENEAVFDALREAYRLLVSKHFSTIQDWISVLVRV 367
           ++G +V + +  EAV   L + Y LLVS   ST++D + +L +V
Sbjct: 197 ISGYFVTDPERQEAV---LEDPYILLVSSKVSTVKDLLPLLEKV 237

>CH602_MYCBO (P0A521) 60 kDa chaperonin 2 (Protein Cpn60-2) (groEL protein 2)|
           (65 kDa antigen) (Heat shock protein 65) (Cell wall
           protein A) (Antigen A)
          Length = 539

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +2

Query: 236 MAGQWVPETQENEAVFDALREAYRLLVSKHFSTIQDWISVLVRV 367
           ++G +V + +  EAV   L + Y LLVS   ST++D + +L +V
Sbjct: 197 ISGYFVTDPERQEAV---LEDPYILLVSSKVSTVKDLLPLLEKV 237

>STE16_SCHPO (Q09743) Protein ste16|
          Length = 1309

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
 Frame = -2

Query: 463 KLIALASHSTYFILNIDEFLQRGISEAIICKI----DPNKHRYPILNGAEMLRYKE---P 305
           K ++L  H T  +L I  FL+ G+ E+I+C I    DP+  R       E+LR  +   P
Sbjct: 555 KYMSLRQHFTAVLLFI--FLELGLVESIVCMIRASDDPSASRKATYLLGEVLRLSDELLP 612

Query: 304 VRLPQRIKN 278
           + L  +I++
Sbjct: 613 IHLGAKIQS 621


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,329,546
Number of Sequences: 219361
Number of extensions: 1472855
Number of successful extensions: 4467
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4467
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)