Clone Name | bah63e05 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 319 bits (161), Expect = 5e-84 Identities = 218/237 (91%) Strand = Plus / Plus Query: 282 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 341 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 219 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 278 Query: 342 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 401 ||| |||||||| ||||| |||||| | || || |||||||||||| |||| |||||||| Sbjct: 279 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 338 Query: 402 caccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 461 |||||| ||||| |||||| | ||||||||||| ||||| || ||||||||||||||||| Sbjct: 339 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 398 Query: 462 ggagcccctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 399 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 455 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 218 tggccctgttcggcaagtccaagaccaaggccgcgcc 254 |||| |||||||||| ||||||||||||||||||||| Sbjct: 152 tggcgctgttcggcaggtccaagaccaaggccgcgcc 188 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgtcggccg 356 |||| |||||||||| |||||||| ||||||||||| Sbjct: 572 tcggcttcaccaaggccaacgagctgttcgtcggccg 608
>dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B11, full insert sequence Length = 1055 Score = 319 bits (161), Expect = 5e-84 Identities = 218/237 (91%) Strand = Plus / Plus Query: 282 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 341 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 304 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 363 Query: 342 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 401 ||| |||||||| ||||| |||||| | || || |||||||||||| |||| |||||||| Sbjct: 364 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 423 Query: 402 caccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 461 |||||| ||||| |||||| | ||||||||||| ||||| || ||||||||||||||||| Sbjct: 424 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 483 Query: 462 ggagcccctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 484 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 540 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 218 tggccctgttcggcaagtccaagaccaaggccgcgcc 254 |||| |||||||||| ||||||||||||||||||||| Sbjct: 237 tggcgctgttcggcaggtccaagaccaaggccgcgcc 273 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgtcggccg 356 |||| |||||||||| |||||||| ||||||||||| Sbjct: 657 tcggcttcaccaaggccaacgagctgttcgtcggccg 693
>dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118A05, full insert sequence Length = 1057 Score = 319 bits (161), Expect = 5e-84 Identities = 218/237 (91%) Strand = Plus / Plus Query: 282 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 341 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 307 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 366 Query: 342 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 401 ||| |||||||| ||||| |||||| | || || |||||||||||| |||| |||||||| Sbjct: 367 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 426 Query: 402 caccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 461 |||||| ||||| |||||| | ||||||||||| ||||| || ||||||||||||||||| Sbjct: 427 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 486 Query: 462 ggagcccctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 487 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 543 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 218 tggccctgttcggcaagtccaagaccaaggccgcgcc 254 |||| |||||||||| ||||||||||||||||||||| Sbjct: 240 tggcgctgttcggcaggtccaagaccaaggccgcgcc 276 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgtcggccg 356 |||| |||||||||| |||||||| ||||||||||| Sbjct: 660 tcggcttcaccaaggccaacgagctgttcgtcggccg 696
>dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D09, full insert sequence Length = 1064 Score = 319 bits (161), Expect = 5e-84 Identities = 218/237 (91%) Strand = Plus / Plus Query: 282 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 341 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 304 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 363 Query: 342 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 401 ||| |||||||| ||||| |||||| | || || |||||||||||| |||| |||||||| Sbjct: 364 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 423 Query: 402 caccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 461 |||||| ||||| |||||| | ||||||||||| ||||| || ||||||||||||||||| Sbjct: 424 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 483 Query: 462 ggagcccctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 484 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 540 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 218 tggccctgttcggcaagtccaagaccaaggccgcgcc 254 |||| |||||||||| ||||||||||||||||||||| Sbjct: 237 tggcgctgttcggcaggtccaagaccaaggccgcgcc 273 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgtcggccg 356 |||| |||||||||| |||||||| ||||||||||| Sbjct: 657 tcggcttcaccaaggccaacgagctgttcgtcggccg 693
>gb|AY104328.1| Zea mays PCO078649 mRNA sequence Length = 1252 Score = 299 bits (151), Expect = 5e-78 Identities = 264/302 (87%), Gaps = 6/302 (1%) Strand = Plus / Plus Query: 220 gccctgttcggcaagtccaagaccaaggccgcgccggccaagaaggtcgttgcgcccaag 279 |||||||||||||| |||||| |||| |||||||||| ||||||| | |||||||||| Sbjct: 346 gccctgttcggcaaatccaaggtcaagaccgcgccggcgaagaaggctgctgcgcccaag 405 Query: 280 cccaagacg------gaggacggcatcttcggcacgtccggcgggatcggtttcaccaag 333 |||||| || ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 406 cccaagccgaaggttgaggatggtatcttcggcacgtccggcgggatcggtttcaccaag 465 Query: 334 gagaacgagctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttggga 393 ||||||||||| ||||||||||| ||||||||| ||||||| ||||| ||| | | ||| Sbjct: 466 gagaacgagctgttcgtcggccgcgttgccatgcttggctttgccgcatcgctacttgga 525 Query: 394 gaggccatcaccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatc 453 |||||||| ||||| ||||| ||||| ||||||||||||| ||||| |||||||| ||| Sbjct: 526 gaggccattaccgggaagggcatccttgcccagctgaacctcgagacgggcatccccatc 585 Query: 454 tacgaggcggagcccctcctcctcttcttcatcctctttaccctcctcggcgccatcggc 513 |||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 586 tacgaggcggagcctctcctcctgttcttcatcctcttcaccctccttggcgccatcggc 645 Query: 514 gc 515 || Sbjct: 646 gc 647
>gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 283 bits (143), Expect = 3e-73 Identities = 262/302 (86%), Gaps = 6/302 (1%) Strand = Plus / Plus Query: 220 gccctgttcggcaagtccaagaccaaggccgcgccggccaagaaggtcgttgcgcccaag 279 |||||||||||||| |||||| |||| |||||||||| ||||||| | |||||||||| Sbjct: 156 gccctgttcggcaaatccaaggtcaagaccgcgccggcgaagaaggctgctgcgcccaag 215 Query: 280 cccaagacg------gaggacggcatcttcggcacgtccggcgggatcggtttcaccaag 333 |||||| || ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 216 cccaagccgaaggttgaggatggtatcttcggcacgtccggcgggatcggtttcaccaag 275 Query: 334 gagaacgagctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttggga 393 ||||||||||| ||||||||||| ||||||||| ||||||| ||||| ||| | | ||| Sbjct: 276 gagaacgagctgttcgtcggccgcgttgccatgcttggctttgccgcatcgctacttgga 335 Query: 394 gaggccatcaccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatc 453 |||||||| ||||| ||||| ||||| | ||||||||||| ||||| |||||||| ||| Sbjct: 336 gaggccattaccgggaagggcatccttgcgcagctgaacctggagacgggcatccccatc 395 Query: 454 tacgaggcggagcccctcctcctcttcttcatcctctttaccctcctcggcgccatcggc 513 ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 396 tacgaagcggaacccctcctcctgttcttcatcctcttcaccctccttggcgccatcggc 455 Query: 514 gc 515 || Sbjct: 456 gc 457
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 198 bits (100), Expect = 1e-47 Identities = 130/140 (92%) Strand = Plus / Plus Query: 379 gcgtcgatcttgggagaggccatcaccggcaagggtatcctgtcccagctgaaccttgag 438 ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| ||| Sbjct: 37692178 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 37692237 Query: 439 accggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctttaccctc 498 || || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 37692238 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 37692297 Query: 499 ctcggcgccatcggcgcgct 518 |||||||||||||||||||| Sbjct: 37692298 ctcggcgccatcggcgcgct 37692317 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 282 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 341 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 37690702 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 37690761 Query: 342 gctcttcgtcggccgtgttgccatg 366 ||| |||||||| ||||| |||||| Sbjct: 37690762 gctgttcgtcgggcgtgtcgccatg 37690786 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 218 tggccctgttcggcaagtccaagaccaaggccgcgcc 254 |||| |||||||||| ||||||||||||||||||||| Sbjct: 37690519 tggcgctgttcggcaggtccaagaccaaggccgcgcc 37690555 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 7516479 cctcctcctcttcttcatcctc 7516458 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgtcggccg 356 |||| |||||||||| |||||||| ||||||||||| Sbjct: 37692434 tcggcttcaccaaggccaacgagctgttcgtcggccg 37692470 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gctcgcgctctcctcctcctcggc 176 ||||||| |||||||||||||||| Sbjct: 29416860 gctcgcggtctcctcctcctcggc 29416883
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 198 bits (100), Expect = 1e-47 Identities = 130/140 (92%) Strand = Plus / Plus Query: 379 gcgtcgatcttgggagaggccatcaccggcaagggtatcctgtcccagctgaaccttgag 438 ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| ||| Sbjct: 152652 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 152711 Query: 439 accggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctttaccctc 498 || || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 152712 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 152771 Query: 499 ctcggcgccatcggcgcgct 518 |||||||||||||||||||| Sbjct: 152772 ctcggcgccatcggcgcgct 152791 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 282 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 341 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 151176 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 151235 Query: 342 gctcttcgtcggccgtgttgccatg 366 ||| |||||||| ||||| |||||| Sbjct: 151236 gctgttcgtcgggcgtgtcgccatg 151260 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 218 tggccctgttcggcaagtccaagaccaaggccgcgcc 254 |||| |||||||||| ||||||||||||||||||||| Sbjct: 150993 tggcgctgttcggcaggtccaagaccaaggccgcgcc 151029 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgtcggccg 356 |||| |||||||||| |||||||| ||||||||||| Sbjct: 152908 tcggcttcaccaaggccaacgagctgttcgtcggccg 152944
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 198 bits (100), Expect = 1e-47 Identities = 130/140 (92%) Strand = Plus / Plus Query: 379 gcgtcgatcttgggagaggccatcaccggcaagggtatcctgtcccagctgaaccttgag 438 ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| ||| Sbjct: 20479 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 20538 Query: 439 accggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctttaccctc 498 || || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 20539 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 20598 Query: 499 ctcggcgccatcggcgcgct 518 |||||||||||||||||||| Sbjct: 20599 ctcggcgccatcggcgcgct 20618 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 282 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 341 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19003 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 19062 Query: 342 gctcttcgtcggccgtgttgccatg 366 ||| |||||||| ||||| |||||| Sbjct: 19063 gctgttcgtcgggcgtgtcgccatg 19087 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 218 tggccctgttcggcaagtccaagaccaaggccgcgcc 254 |||| |||||||||| ||||||||||||||||||||| Sbjct: 18820 tggcgctgttcggcaggtccaagaccaaggccgcgcc 18856 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgtcggccg 356 |||| |||||||||| |||||||| ||||||||||| Sbjct: 20735 tcggcttcaccaaggccaacgagctgttcgtcggccg 20771
>ref|XM_474468.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 747 Score = 188 bits (95), Expect = 1e-44 Identities = 197/231 (85%) Strand = Plus / Plus Query: 288 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 347 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 168 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 227 Query: 348 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 407 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 228 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 287 Query: 408 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 467 |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 288 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 347 Query: 468 cctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 || |||||||||||||||||||| || || || ||||||||||||||||| Sbjct: 348 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 398 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgt 350 |||| |||||||||| ||||||||||||||| Sbjct: 509 tcgggttcaccaaggcgaacgagctcttcgt 539 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 436 gagaccggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 ||||||||| |||| ||| ||||| ||||| |||||||||||| ||||||||| Sbjct: 625 gagaccggcgtccccatcaacgagatcgagccgctcctcctcttcaacatcctctt 680
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 188 bits (95), Expect = 1e-44 Identities = 197/231 (85%) Strand = Plus / Plus Query: 288 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 347 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 35372522 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 35372581 Query: 348 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 407 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 35372582 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 35372641 Query: 408 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 467 |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 35372642 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 35372701 Query: 468 cctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 || |||||||||||||||||||| || || || ||||||||||||||||| Sbjct: 35372702 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 35372752 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgt 350 |||| |||||||||| ||||||||||||||| Sbjct: 35372863 tcgggttcaccaaggcgaacgagctcttcgt 35372893 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 gctcgcgctctcctcctcctcg 174 |||||||||||||||||||||| Sbjct: 26671091 gctcgcgctctcctcctcctcg 26671112 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 436 gagaccggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 ||||||||| |||| ||| ||||| ||||| |||||||||||| ||||||||| Sbjct: 35372979 gagaccggcgtccccatcaacgagatcgagccgctcctcctcttcaacatcctctt 35373034 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ctcgcgctctcctcctcctc 173 |||||||||||||||||||| Sbjct: 13677175 ctcgcgctctcctcctcctc 13677194
>dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA for 22 kDa protein of photosystem II precursor, complete cds Length = 1108 Score = 188 bits (95), Expect = 1e-44 Identities = 197/231 (85%) Strand = Plus / Plus Query: 288 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 347 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 316 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 375 Query: 348 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 407 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 376 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 435 Query: 408 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 467 |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 436 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 495 Query: 468 cctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 || |||||||||||||||||||| || || || ||||||||||||||||| Sbjct: 496 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 546 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgt 350 |||| |||||||||| ||||||||||||||| Sbjct: 657 tcgggttcaccaaggcgaacgagctcttcgt 687 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 436 gagaccggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 ||||||||| |||| ||| ||||| ||||| |||||||||||| ||||||||| Sbjct: 773 gagaccggcgtccccatcaacgagatcgagccgctcctcctcttcaacatcctctt 828
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 188 bits (95), Expect = 1e-44 Identities = 197/231 (85%) Strand = Plus / Plus Query: 288 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 347 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 168366 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 168425 Query: 348 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 407 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 168426 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 168485 Query: 408 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 467 |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 168486 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 168545 Query: 468 cctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 || |||||||||||||||||||| || || || ||||||||||||||||| Sbjct: 168546 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 168596 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgt 350 |||| |||||||||| ||||||||||||||| Sbjct: 168707 tcgggttcaccaaggcgaacgagctcttcgt 168737 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 436 gagaccggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 ||||||||| |||| ||| ||||| ||||| |||||||||||| ||||||||| Sbjct: 168823 gagaccggcgtccccatcaacgagatcgagccgctcctcctcttcaacatcctctt 168878
>dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101I15, full insert sequence Length = 1116 Score = 180 bits (91), Expect = 3e-42 Identities = 196/231 (84%) Strand = Plus / Plus Query: 288 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 347 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 332 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 391 Query: 348 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 407 ||| || | || |||||| | || ||||| ||||| || | | ||||| ||||||| Sbjct: 392 cgtggggagggtggccatgctggggttcgcggcgtccctcctcagcgaggcggtcaccgg 451 Query: 408 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 467 |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 452 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 511 Query: 468 cctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 || |||||||||||||||||||| || || || ||||||||||||||||| Sbjct: 512 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 562 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgt 350 |||| |||||||||| ||||||||||||||| Sbjct: 673 tcgggttcaccaaggcgaacgagctcttcgt 703 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 436 gagaccggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 ||||||||| |||| ||| ||||| ||||| |||||||||||| ||||||||| Sbjct: 789 gagaccggcgtccccatcaacgagatcgagccgctcctcctcttcaacatcctctt 844
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 180 bits (91), Expect = 3e-42 Identities = 196/231 (84%) Strand = Plus / Plus Query: 288 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 347 ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || || Sbjct: 4352 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgaactgtt 4411 Query: 348 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 407 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 4412 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 4471 Query: 408 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 467 |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 4472 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 4531 Query: 468 cctcctcctcttcttcatcctctttaccctcctcggcgccatcggcgcgct 518 || |||||||||||||||||||| || || || ||||||||||||||||| Sbjct: 4532 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 4582 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 320 tcggtttcaccaaggagaacgagctcttcgt 350 |||| |||||||||| ||||||||||||||| Sbjct: 4693 tcgggttcaccaaggcgaacgagctcttcgt 4723 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 436 gagaccggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 ||||||||| |||| ||| ||||| ||||| |||||||||||| ||||||||| Sbjct: 4809 gagaccggcgtccccatcaacgagatcgagccgctcctcctcttcaacatcctctt 4864
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 445 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 7553031 atcccgatctacgaggtggagcccctcctcatcttcttcatcctctt 7552985
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 445 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 131345 atcccgatctacgaggtggagcccctcctcatcttcttcatcctctt 131299
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 445 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 58441 atcccgatctacgaggtggagcccctcctcatcttcttcatcctctt 58395
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 445 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctttaccctcctcggc 504 ||||| ||||| |||| |||||| ||||||||||| |||| |||||| |||||||||||| Sbjct: 154363 atcccaatctatgaggtggagcctctcctcctcttgttcaacctcttcaccctcctcggc 154422 Query: 505 gccat 509 |||| Sbjct: 154423 accat 154427
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 445 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctttaccctcctcggc 504 ||||| ||||| |||| |||||| ||||||||||| |||| |||||| |||||||||||| Sbjct: 13239 atcccaatctatgaggtggagcctctcctcctcttgttcaacctcttcaccctcctcggc 13298 Query: 505 gccat 509 |||| Sbjct: 13299 accat 13303
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 445 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctttaccctcctcggc 504 ||||| ||||| |||| |||||| ||||||||||| |||| |||||| |||||||||||| Sbjct: 4643896 atcccaatctatgaggtggagcctctcctcctcttgttcaacctcttcaccctcctcggc 4643955 Query: 505 gccat 509 |||| Sbjct: 4643956 accat 4643960
>ref|XR_003080.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC619909), mRNA Length = 635 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||||||||||| ||||||| Sbjct: 604 tcctcctcttcttcatcctctttatcctcctc 573
>ref|XR_004825.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC619909), mRNA Length = 635 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||||||||||| ||||||| Sbjct: 604 tcctcctcttcttcatcctctttatcctcctc 573
>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence Length = 226595 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||||||||||| ||||||| Sbjct: 183490 tcctcctcttcttcatcctctttatcctcctc 183521
>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete sequence Length = 220233 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||||| Sbjct: 24503 cccctcctcctcttcttcatcctctt 24528
>gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosome 9, complete sequence Length = 196461 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccct 497 |||||||||||||||| ||||||||||||| Sbjct: 49501 cctcctcctcttcttcctcctctttaccct 49472
>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete sequence Length = 220275 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctctt 491 ||||||||||||||||||||||||| Sbjct: 79816 ccctcctcctcttcttcatcctctt 79840
>ref|XM_641716.1| Dictyostelium discoideum nucleomorphin (DDB0231257), partial mRNA Length = 1023 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||| Sbjct: 430 cctcctcctcttcttcatcctctt 407
>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence Length = 161504 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||||||||| | ||||||| Sbjct: 38489 tcctcctcttcttcatcctcttcatcctcctc 38520
>gb|AF140042.2| Dictyostelium discoideum putative calmodulin-binding protein CaM-BP38 mRNA, complete cds Length = 1557 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||| Sbjct: 916 cctcctcctcttcttcatcctctt 893
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence Length = 237814 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||| Sbjct: 23761 cctcctcctcttcttcatcctctt 23784
>gb|AC167023.2| Mus musculus BAC clone RP23-21J7 from chromosome 7, complete sequence Length = 214762 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 469 ctcctcctcttcttcatcctcttt 492 |||||||||||||||||||||||| Sbjct: 62588 ctcctcctcttcttcatcctcttt 62611
>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence Length = 181742 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||| Sbjct: 41783 cctcctcctcttcttcatcctctt 41806
>ref|XM_987483.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC671507), mRNA Length = 1254 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||||||||| | ||||||| Sbjct: 701 tcctcctcttcttcatcctcttcatcctcctc 670
>ref|XM_986380.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC666836), mRNA Length = 1254 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||||||||| | ||||||| Sbjct: 701 tcctcctcttcttcatcctcttcatcctcctc 670
>ref|XM_380871.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00695.1) partial mRNA Length = 1965 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||| Sbjct: 1666 cctcctcctcttcttcatcctctt 1643
>gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosome 14, complete sequence Length = 180177 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||| Sbjct: 42152 cctcctcctcttcttcatcctctt 42129
>gb|AC122001.2| Mus musculus BAC clone RP24-330I1 from chromosome 7, complete sequence Length = 155051 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 469 ctcctcctcttcttcatcctcttt 492 |||||||||||||||||||||||| Sbjct: 106795 ctcctcctcttcttcatcctcttt 106818
>emb|AL450463.20| Human DNA sequence from clone RP13-299C14 on chromosome 20, complete sequence Length = 27854 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||||| ||||||| |||||||| Sbjct: 27160 cccctcctcctcttcttcctcctcttccccctcctc 27195
>gb|AC023385.10| Homo sapiens chromosome 8, clone RP11-675P19, complete sequence Length = 167118 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 474 cctcttcttcatcctctttaccctcctc 501 |||||||||| ||||||||||||||||| Sbjct: 30085 cctcttcttcctcctctttaccctcctc 30112
>gb|AC034111.6| Homo sapiens, clone RP11-1E4, complete sequence Length = 177756 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 474 cctcttcttcatcctctttaccctcctc 501 |||||||||| ||||||||||||||||| Sbjct: 7515 cctcttcttcctcctctttaccctcctc 7488
>gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 204302 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 469 ctcctcctcttcttcatcctcttt 492 |||||||||||||||||||||||| Sbjct: 75629 ctcctcctcttcttcatcctcttt 75606
>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds, alternatively spliced Length = 379048 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 474 cctcttcttcatcctctttaccctcctc 501 |||||||||| ||||||||||||||||| Sbjct: 25963 cctcttcttcctcctctttaccctcctc 25990
>dbj|AB071078.1| Macaca fascicularis testis cDNA clone:QtsA-16933, similar to human tripartite motif-containing 37 protein (TRIM37), mRNA, NM_001005207 Length = 2712 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 469 ctcctcctcttcttcatcctcttt 492 |||||||||||||||||||||||| Sbjct: 1031 ctcctcctcttcttcatcctcttt 1008
>gb|AY631855.1| Dictyostelium discoideum nucleomorphin B (numB) mRNA, complete cds Length = 2318 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||| Sbjct: 1678 cctcctcctcttcttcatcctctt 1655
>gb|DQ176000.1| Xenopus laevis RPGR ORF15 isoform mRNA, partial cds Length = 1845 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 |||||||||||||||||||||||| Sbjct: 1247 ccctcctcctcttcttcatcctct 1224 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 |||||||||||||||||||||||| Sbjct: 1175 ccctcctcctcttcttcatcctct 1152 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 |||||||||||||||||||||||| Sbjct: 1151 ccctcctcctcttcttcatcctct 1128 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 |||||||||||||||||||||||| Sbjct: 953 ccctcctcctcttcttcatcctct 930 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctct 490 ||||||||||||||||||||| Sbjct: 1196 tcctcctcttcttcatcctct 1176 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctct 490 ||||||||||||||||||||| Sbjct: 902 tcctcctcttcttcatcctct 882 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 |||||||| ||||||||||||||| Sbjct: 1295 ccctcctcttcttcttcatcctct 1272 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 ||||||||||||||||| |||||| Sbjct: 1271 ccctcctcctcttcttcctcctct 1248 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatc 486 |||||||||||||||||||| Sbjct: 1127 ccctcctcctcttcttcatc 1108 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatc 486 |||||||||||||||||||| Sbjct: 1103 ccctcctcctcttcttcatc 1084 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatc 486 |||||||||||||||||||| Sbjct: 1079 ccctcctcctcttcttcatc 1060 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 ||||||| |||||||||||||||| Sbjct: 1025 ccctcctgctcttcttcatcctct 1002 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 |||||||| ||||||||||||||| Sbjct: 1001 ccctcctcttcttcttcatcctct 978 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 ||||||||||||||||| |||||| Sbjct: 977 ccctcctcctcttcttcctcctct 954 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctct 490 ||||||||||||||||| |||||| Sbjct: 734 ccctcctcctcttcttcgtcctct 711
>dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-356B22, complete sequences Length = 190116 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctc 489 |||||||||||||||||||||||| Sbjct: 135530 cccctcctcctcttcttcatcctc 135553
>gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, complete sequence Length = 241046 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||||||||||| Sbjct: 181080 cctcctcctcttcttcatcctctt 181103
>gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome 16, complete sequence Length = 190373 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcctc 489 |||||||||||||||||||||||| Sbjct: 74672 cccctcctcctcttcttcatcctc 74649
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctc 489 ||||||||||||||||||||||| Sbjct: 58404 ccctcctcctcttcttcatcctc 58426 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 58314 cctcctcctcttcttcatcctc 58335 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctc 489 |||||||||||||||||| ||||| Sbjct: 58453 cccctcctcctcttcttcctcctc 58476
>gb|AY752997.1| Penaeus monodon clone ct108 microsatellite sequence Length = 679 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctct 490 ||||||||||||||||||||||| Sbjct: 347 cctcctcctcttcttcatcctct 369
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 cttcttcatcctctttaccctcc 499 ||||||||||||||||||||||| Sbjct: 994629 cttcttcatcctctttaccctcc 994607
>gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, complete sequence Length = 175586 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctcttt 492 |||||||||||||||||| |||||||| Sbjct: 51438 cccctcctcctcttcttcttcctcttt 51464
>gb|AC122737.7| Mus musculus chromosome 3, clone RP23-302O3, complete sequence Length = 179544 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcctcttt 492 |||||||||||||||||| |||||||| Sbjct: 101994 cccctcctcctcttcttcctcctcttt 101968
>gb|AC130220.3| Mus musculus BAC clone RP23-140M6 from chromosome 6, complete sequence Length = 200785 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccctc 498 |||||||||||||||| |||||||| ||||| Sbjct: 50417 cctcctcctcttcttcttcctctttcccctc 50447
>ref|XR_002989.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC670474), mRNA Length = 980 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctc 498 ||||||||||||| |||||||||||| |||| Sbjct: 942 cctcctcctcttcctcatcctctttatcctc 912
>ref|XR_001720.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC665371), mRNA Length = 980 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctc 498 ||||||||||||| |||||||||||| |||| Sbjct: 942 cctcctcctcttcctcatcctctttatcctc 912
>ref|XM_567922.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK03380) partial mRNA Length = 3111 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 cttcttcatcctctttaccctcc 499 ||||||||||||||||||||||| Sbjct: 2600 cttcttcatcctctttaccctcc 2622
>gb|AC123049.4| Mus musculus BAC clone RP24-360B3 from chromosome 5, complete sequence Length = 166292 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctc 489 ||||||||||||||||||||||| Sbjct: 165148 ccctcctcctcttcttcatcctc 165170 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 165058 cctcctcctcttcttcatcctc 165079 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctc 489 |||||||||||||||||| ||||| Sbjct: 165197 cccctcctcctcttcttcctcctc 165220
>gb|AY211044.1| Tribolium castaneum strain cSM microsatellite sequence Length = 264 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctct 490 ||||||||||||||||||||||| Sbjct: 178 cctcctcctcttcttcatcctct 156
>ref|XM_967760.1| PREDICTED: Tribolium castaneum similar to Fms interacting protein (LOC661609), mRNA Length = 2118 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctct 490 ||||||||||||||||||||||| Sbjct: 983 cctcctcctcttcttcatcctct 961
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctc 498 |||||||||||||||| ||||||| |||||| Sbjct: 960794 cctcctcctcttcttcctcctcttcaccctc 960764
>gb|AC104779.4| Homo sapiens BAC clone RP11-26P13 from 4, complete sequence Length = 152861 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctctttaccct 497 ||||||||||||||||| |||||||| |||| Sbjct: 102637 ccctcctcctcttcttcttcctcttttccct 102607
>gb|AC155930.3| Mus musculus BAC clone RP23-412K9 from chromosome 7, complete sequence Length = 187418 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctcttt 492 ||||||||||||||||||||||| Sbjct: 88734 tcctcctcttcttcatcctcttt 88712
>gb|AC155840.8| Mus musculus 6 BAC RP24-223C8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188181 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctc 498 |||||||||||||||| |||||||| ||||| Sbjct: 16055 cctcctcctcttcttcttcctctttcccctc 16025
>gb|AC078931.9|AC078931 Mus musculus BAC RP23-419E4 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 188750 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccctc 498 ||||||||||||| |||||||||||| |||| Sbjct: 18550 cctcctcctcttcctcatcctctttatcctc 18580
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctcttt 492 ||||||||||||||||||||||| Sbjct: 93942 tcctcctcttcttcatcctcttt 93964
>gb|AC164412.9| Mus musculus chromosome 3, clone RP24-360M7, complete sequence Length = 172583 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctcttt 492 |||||||||||||||||| |||||||| Sbjct: 165204 cccctcctcctcttcttcttcctcttt 165230
>gb|AC126052.4| Mus musculus BAC clone RP23-277H6 from 7, complete sequence Length = 202833 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctcttt 492 ||||||||||||||||||||||| Sbjct: 13504 tcctcctcttcttcatcctcttt 13482
>emb|CT030713.5| Mouse DNA sequence from clone RP24-94C21 on chromosome 17, complete sequence Length = 190764 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccctc 498 ||||||||||||| |||||||||||| |||| Sbjct: 100785 cctcctcctcttcctcatcctctttatcctc 100815
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 170493 tcctcctcttcttcatcctctt 170514
>ref|XM_633380.1| Dictyostelium discoideum hypothetical protein (DDB0186138), partial mRNA Length = 1221 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 1172 tcctcctcttcttcatcctctt 1151
>ref|NM_188668.1| Oryza sativa (japonica cultivar-group), Ozsa8271 predicted mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 166 cctcctcctcttcttcatcctc 145
>gb|AC120878.10| Mus musculus chromosome 1, clone RP24-548K2, complete sequence Length = 232085 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||| |||||||| ||||||| Sbjct: 168449 cctcctcctcttcttcctcctctttctcctcctc 168482
>ref|XM_531426.1| PREDICTED: Pan troglodytes similar to Homo sapiens C21orf63 isoform B protein,variant1 (LOC473956), mRNA Length = 1471 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1058 cctcctcctcttcttcatcctc 1037
>gb|AC167021.3| Mus musculus BAC clone RP23-152D8 from chromosome 6, complete sequence Length = 222021 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||| | ||||||||| ||||||| Sbjct: 28227 cctcctcctcttctgcctcctctttatcctcctc 28260 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||| | ||||||||| ||||||| Sbjct: 28092 cctcctcctcttctgcctcctctttatcctcctc 28125
>gb|AC165948.2| Mus musculus BAC clone RP24-430M9 from chromosome 17, complete sequence Length = 176267 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||| |||||||| ||||||| Sbjct: 102080 cctcctcctcttcttcttcctctttctcctcctc 102113 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||| Sbjct: 102107 cctcctcctcttcttcttcctctt 102130
>ref|XM_509001.1| PREDICTED: Pan troglodytes kinesin family member 21A (LOC451832), mRNA Length = 3282 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 298 cctcctcctcttcttcatcctc 277
>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence Length = 41204 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 32237 tcctcctcttcttcatcctctt 32216
>ref|NM_177977.1| Homo sapiens huntingtin-associated protein 1 (neuroan 1) (HAP1), transcript variant 2, mRNA Length = 3981 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 821 cctcctcctcttcttcatcctc 800
>ref|NM_003949.2| Homo sapiens huntingtin-associated protein 1 (neuroan 1) (HAP1), transcript variant 1, mRNA Length = 4084 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 821 cctcctcctcttcttcatcctc 800
>gb|AY023444.1| Oryza sativa microsatellite MRG5769 containing (TCC)X8, closest to marker C955, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 117 cctcctcctcttcttcatcctc 138
>gb|AC164101.4| Mus musculus BAC clone RP23-421F16 from chromosome 8, complete sequence Length = 218236 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccct 497 |||||||||||||||| |||||||| |||| Sbjct: 158183 cctcctcctcttcttcctcctctttcccct 158154
>gb|AC139062.10| Mus musculus chromosome 17, clone RP23-69L11, complete sequence Length = 136224 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 14635 tcctcctcttcttcatcctctt 14614
>gb|BC049854.1| Mus musculus chromodomain helicase DNA binding protein 8, mRNA (cDNA clone IMAGE:5136179) Length = 3105 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 2225 cctcctcctcttcttcatcctc 2246
>gb|AC130138.9| Rattus norvegicus 2 BAC CH230-204B23 (Children's Hospital Oakland Research Institute) complete sequence Length = 189178 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 172109 cctcctcctcttcttcatcctc 172088
>ref|XM_451900.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B08305g predicted mRNA Length = 2208 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 1523 tcctcctcttcttcatcctctt 1502
>ref|NM_058187.3| Homo sapiens chromosome 21 open reading frame 63 (C21orf63), mRNA Length = 1977 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1548 cctcctcctcttcttcatcctc 1527
>gb|AC123683.6| Mus musculus chromosome 9, clone RP23-296I6, complete sequence Length = 189100 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 23047 cctcctcctcttcttcatcctc 23068
>gb|AC026478.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-135F23, complete sequence Length = 188103 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 77431 cctcctcctcttcttcatcctc 77410
>gb|AC121533.6| Mus musculus chromosome 9, clone RP24-555P22, complete sequence Length = 175009 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccct 497 |||||||||||||||| ||||| ||||||| Sbjct: 50353 cctcctcctcttcttcctcctccttaccct 50382
>ref|XM_987619.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 8 (Chd8), mRNA Length = 7719 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 5768 cctcctcctcttcttcatcctc 5789
>ref|XM_907992.2| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 8 (Chd8), mRNA Length = 8196 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 6245 cctcctcctcttcttcatcctc 6266
>ref|XM_619244.3| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 8 (Chd8), mRNA Length = 8196 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 6245 cctcctcctcttcttcatcctc 6266
>gb|AC115900.11| Mus musculus chromosome 6, clone RP24-464A7, complete sequence Length = 175003 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||| | ||||||||| ||||||| Sbjct: 55543 cctcctcctcttctgcctcctctttatcctcctc 55510 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||| | ||||||||| ||||||| Sbjct: 55408 cctcctcctcttctgcctcctctttatcctcctc 55375
>gb|AC132093.3| Mus musculus BAC clone RP24-506H13 from chromosome 10, complete sequence Length = 148364 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 73251 cccctcctcctcttcttcttcctctt 73276
>ref|XM_542453.2| PREDICTED: Canis familiaris similar to CG17150-PA, isoform A (LOC485335), mRNA Length = 7746 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1828 cctcctcctcttcttcatcctc 1807
>emb|AL954209.1| Pan troglodytes chromosome 22 clone PTB-126B09 map q21.1, complete sequence Length = 208417 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 126543 cctcctcctcttcttcatcctc 126522
>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence Length = 293695 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 138826 cccctcctcctcttcttcctcctctt 138851
>gb|AY368076.1| Homo sapiens kinesin family member 21A (KIF21A) mRNA, complete cds, alternatively spliced Length = 5044 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1868 cctcctcctcttcttcatcctc 1847
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence Length = 229312 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 103473 cccctcctcctcttcttcttcctctt 103498
>gb|AC125517.4| Mus musculus BAC clone RP24-261P6 from chromosome 3, complete sequence Length = 193517 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 98856 cctcctcctcttcttcatcctc 98835
>gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complete sequence Length = 195041 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 ctcctcctcttcttcatcctct 490 |||||||||||||||||||||| Sbjct: 165325 ctcctcctcttcttcatcctct 165346
>gb|AC132684.3| Mus musculus BAC clone RP23-277L20 from 9, complete sequence Length = 182976 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccct 497 |||||||||||||||| ||||| ||||||| Sbjct: 142997 cctcctcctcttcttcctcctccttaccct 142968
>ref|XM_948281.1| Theileria annulata strain Ankara eukaryotic translation initiation factor 3 (subunit 8) (TA10240) partial mRNA Length = 2820 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 589 cctcctcctcttcttcatcctc 568
>gb|BC038710.1| Homo sapiens chromosome 21 open reading frame 63, mRNA (cDNA clone MGC:26677 IMAGE:4813873), complete cds Length = 1752 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1281 cctcctcctcttcttcatcctc 1260
>gb|AY358787.1| Homo sapiens clone DNA100276 C21orf63 (UNQ2504) mRNA, complete cds Length = 1971 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1548 cctcctcctcttcttcatcctc 1527
>gb|AC036121.11| Mus musculus chromosome 6, clone RP23-158O9, complete sequence Length = 215685 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 30329 cccctcctcctcttcttcctcctctt 30354
>ref|NM_017641.2| Homo sapiens kinesin family member 21A (KIF21A), mRNA Length = 6335 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1959 cctcctcctcttcttcatcctc 1938
>gb|AC091783.9| Genomic sequence for Mus musculus, clone RP23-16G10, complete sequence Length = 228160 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 216064 tcctcctcttcttcatcctctt 216043
>gb|BC057382.1| Mus musculus chromodomain helicase DNA binding protein 8, mRNA (cDNA clone IMAGE:5721164), complete cds Length = 4301 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 2334 cctcctcctcttcttcatcctc 2355
>gb|AF450487.1| Homo sapiens kinesin-like protein KIF2 mRNA, complete cds Length = 6338 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1962 cctcctcctcttcttcatcctc 1941
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 aaggccgcgccggccaagaagg 265 |||||||||||||||||||||| Sbjct: 119343 aaggccgcgccggccaagaagg 119322
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 aaggccgcgccggccaagaagg 265 |||||||||||||||||||||| Sbjct: 692115 aaggccgcgccggccaagaagg 692136
>gb|AC091618.3| Rattus norvegicus strain Brown Norway clone RP31-494C9, complete sequence Length = 137008 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||| |||||||| ||||||| Sbjct: 111548 cctcctcctcttcttcctcctctttctcctcctc 111515 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||| Sbjct: 124496 cctcctcctcttcttcttcctctt 124519
>gb|AC115452.4| Rattus norvegicus 7 BAC CH230-309G3 (Children's Hospital Oakland Research Institute) complete sequence Length = 169133 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 78175 cccctcctcctcttcttcctcctctt 78200
>ref|XM_969698.1| PREDICTED: Tribolium castaneum similar to KIBRA protein (LOC663662), mRNA Length = 3678 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 2860 cctcctcctcttcttcatcctc 2839
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 ||||||||||||||||||| |||| ||| ||||| Sbjct: 1251092 cctcctcctcttcttcatcttcttcaccgtcctc 1251125
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 739489 tcctcctcttcttcatcctctt 739468
>gb|AC159634.2| Mus musculus BAC clone RP24-127K13 from chromosome 12, complete sequence Length = 146684 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttacc 495 |||||||||||||| ||||||||||| Sbjct: 87065 tcctcctcttcttcttcctctttacc 87040
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 153 gctcgcgctctcctcctcctcg 174 |||||||||||||||||||||| Sbjct: 112104 gctcgcgctctcctcctcctcg 112083
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 gctcgcgctctcctcctcctcg 174 |||||||||||||||||||||| Sbjct: 110653 gctcgcgctctcctcctcctcg 110674
>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224664 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||||| Sbjct: 198613 cccctcctcctcttctgcatcctctt 198638 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 ||||||||||| |||||||||| | ||||||| Sbjct: 154842 tcctcctcttcctcatcctcttcatcctcctc 154873
>emb|CR936843.10| Mouse DNA sequence from clone RP23-270K2 on chromosome 4, complete sequence Length = 128921 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||| |||||||| ||||||| Sbjct: 28406 cctcctcctcttcttcctcctctttctcctcctc 28373
>emb|CR762431.9| Zebrafish DNA sequence from clone DKEY-220O10 in linkage group 13, complete sequence Length = 96564 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcc 487 |||||||||||||||||||||| Sbjct: 95110 cccctcctcctcttcttcatcc 95131
>emb|AL596083.21| Mouse DNA sequence from clone RP23-293L24 on chromosome 11 Contains four novel genes and the 3' end of the Zfp403 gene for zinc finger protein 403, complete sequence Length = 186526 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctcttt 492 ||||||||||||||||| |||||||| Sbjct: 121534 ccctcctcctcttcttcctcctcttt 121559 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||| Sbjct: 97280 cctcctcctcttcttcttcctctt 97257
>emb|AL596450.8| Mouse DNA sequence from clone RP23-373H2 on chromosome 11 Contains the 3' end of the Ddc gene for dopa decarboxylase, the Fignl1 gene for fidgetin-like 1, the Znfn1a1 gene for zinc finger protein, subfamily 1A, 1 (Ikaros), two novel genes and two CpG islands, complete sequence Length = 203257 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||| ||||| || |||||||| Sbjct: 124342 cctcctcctcttcttcctcctccttcccctcctc 124309
>emb|BX324113.14| Zebrafish DNA sequence from clone DKEYP-68B7 in linkage group 2, complete sequence Length = 188968 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 186559 cctcctcctcttcttcatcctc 186580
>emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 in linkage group 12, complete sequence Length = 150475 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcc 487 |||||||||||||||||||||| Sbjct: 546 cccctcctcctcttcttcatcc 567
>gb|AC127343.3| Mus musculus BAC clone RP23-194I18 from chromosome 10, complete sequence Length = 198624 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||||| Sbjct: 111674 cccctcctcctcttctgcatcctctt 111699 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 ||||||||||| |||||||||| | ||||||| Sbjct: 67905 tcctcctcttcctcatcctcttcatcctcctc 67936
>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3, complete sequence Length = 240105 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 228827 cctcctcctcttcttcatcctc 228806 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctc 489 |||||||||||||||||||| Sbjct: 233411 tcctcctcttcttcatcctc 233392
>emb|CR615783.1| full-length cDNA clone CS0DK012YE21 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1513 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1161 cctcctcctcttcttcatcctc 1140
>gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 14, complete sequence Length = 223640 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 199070 cctcctcctcttcttcatcctc 199049
>gb|AC090668.7| Homo sapiens 12 BAC RP11-791O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111375 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 94229 cctcctcctcttcttcatcctc 94208
>emb|AL954208.1| Pan troglodytes chromosome 22 clone RP43-007L22 map q21.1, complete sequence Length = 214722 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 140801 cctcctcctcttcttcatcctc 140780
>dbj|AK125013.1| Homo sapiens cDNA FLJ43023 fis, clone BRTHA2018624, weakly similar to Oncorhynchus mykiss stl3 mRNA for rhamnose binding lectin STL3 Length = 2490 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 2105 cctcctcctcttcttcatcctc 2084
>emb|CR608969.1| full-length cDNA clone CS0DI030YB01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1607 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1254 cctcctcctcttcttcatcctc 1233
>emb|CR608735.1| full-length cDNA clone CS0DI019YM12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1604 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1228 cctcctcctcttcttcatcctc 1207
>emb|CR608560.1| full-length cDNA clone CS0DI029YI18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1619 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1268 cctcctcctcttcttcatcctc 1247
>emb|CR605246.1| full-length cDNA clone CS0DJ011YB14 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1716 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1358 cctcctcctcttcttcatcctc 1337
>emb|CR604238.1| full-length cDNA clone CS0DI003YB14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1712 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1358 cctcctcctcttcttcatcctc 1337
>dbj|AK022007.1| Homo sapiens cDNA FLJ11945 fis, clone HEMBB1000693, highly similar to Homo sapiens neuroan1 mRNA Length = 3876 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 844 cctcctcctcttcttcatcctc 823
>dbj|AK141273.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430015G24 product:Chromodomain-helicase-DNA-binding protein HELSNF1 (Helicase with SNF2 domain 1) (Fragment) homolog [Homo sapiens], full insert sequence Length = 4018 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 2386 cctcctcctcttcttcatcctc 2407
>dbj|AK146690.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920042E14 product:unclassifiable, full insert sequence Length = 1278 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 93 cctcctcctcttcttcatcctc 72
>dbj|AK160299.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830451P18 product:hypothetical BRK/Aspartic acid-rich region profile/Histidine-rich region profile/Serine-rich region profile containing protein, full insert sequence Length = 1904 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 188 cctcctcctcttcttcatcctc 209
>gb|AC160567.2| Pan troglodytes BAC clone CH251-304P1 from chromosome unknown, complete sequence Length = 174998 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 143557 cctcctcctcttcttcatcctc 143578
>gb|AF358258.1|AF358258 Homo sapiens C21orf63 isoform A protein (C21orf63) mRNA, complete cds, alternatively spliced Length = 1326 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1138 cctcctcctcttcttcatcctc 1117
>gb|AY040087.1| Homo sapiens C21orf63 isoform B protein (C21orf63) mRNA, complete cds, alternatively spliced Length = 1129 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 941 cctcctcctcttcttcatcctc 920
>gb|AC157481.2| Pan troglodytes BAC clone CH251-445P21 from chromosome unknown, complete sequence Length = 184485 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 140515 cctcctcctcttcttcatcctc 140494
>gb|AC109319.17| Homo sapiens chromosome 17, clone RP11-899O23, complete sequence Length = 99701 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 26986 cctcctcctcttcttcatcctc 27007
>gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome 12, complete sequence Length = 179631 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 26572 cccctcctcctcttcttcttcctctt 26597
>dbj|AK040336.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430087M16 product:similar to KIAA1564 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 2444 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1555 cctcctcctcttcttcatcctc 1576
>dbj|AK031711.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030495H03 product:hypothetical Serine-rich region containing protein, full insert sequence Length = 3543 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1142 cctcctcctcttcttcatcctc 1163
>gb|AC102461.15| Mus musculus chromosome 8, clone RP24-319H6, complete sequence Length = 169510 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 95309 cctcctcctcttcttcatcctc 95288
>gb|AC157949.1| Mus musculus BAC clone RP23-148A16 from chromosome 9, complete sequence Length = 204674 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcct 488 |||||||||||||||||||||| Sbjct: 37962 ccctcctcctcttcttcatcct 37983
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 19103 tcctcctcttcttcatcctctt 19124
>gb|AC152168.2| Mus musculus BAC clone RP23-96H18 from chromosome 8, complete sequence Length = 219434 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctttaccct 497 |||||||||||||||| |||||||| |||| Sbjct: 199138 cctcctcctcttcttcctcctctttcccct 199167
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 65271 cctcctcctcttcttcatcctc 65250
>gb|AY261363.1| African swine fever virus isolate Pretorisuskop/96/4, complete genome Length = 190324 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 174766 cctcctcctcttcttcatcctc 174787
>ref|NM_001003618.1| Danio rerio zgc:100960 (zgc:100960), mRNA Length = 1330 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 408 tcctcctcttcttcatcctctt 387
>dbj|AK129393.1| Mus musculus mRNA for mKIAA1564 protein Length = 3696 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1268 cctcctcctcttcttcatcctc 1289
>emb|X84225.1|NTPHIIPRC N.tabacum mRNA for precursor of photosysten II 22 kDa protein Length = 1081 Score = 44.1 bits (22), Expect = 0.45 Identities = 43/50 (86%) Strand = Plus / Plus Query: 322 ggtttcaccaaggagaacgagctcttcgtcggccgtgttgccatgattgg 371 |||||||| ||| | || |||||||| || ||||||||||| |||||||| Sbjct: 340 ggtttcactaagcaaaatgagctctttgttggccgtgttgctatgattgg 389
>gb|AF155117.1|AF155117 Homo sapiens NY-REN-62 antigen mRNA, partial cds Length = 2436 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1963 cctcctcctcttcttcatcctc 1942
>dbj|AK103012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116K10, full insert sequence Length = 2199 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 gctcgcgctctcctcctcctcg 174 |||||||||||||||||||||| Sbjct: 553 gctcgcgctctcctcctcctcg 574
>gb|AC154848.2| Mus musculus BAC clone RP23-38J19 from 13, complete sequence Length = 140465 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcc 487 |||||||||||||||||||||| Sbjct: 130055 cccctcctcctcttcttcatcc 130034
>emb|AJ012824.1|HSA012824 Homo sapiens HAP-1 gene Length = 18656 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 5058 cctcctcctcttcttcatcctc 5037
>gb|BC078314.1| Danio rerio zgc:100960, mRNA (cDNA clone MGC:100960 IMAGE:7147354), complete cds Length = 1330 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 408 tcctcctcttcttcatcctctt 387
>gb|AC154829.2| Mus musculus BAC clone RP24-550F10 from 14, complete sequence Length = 136754 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 135161 tcctcctcttcttcatcctctt 135140
>emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 in linkage group 4, complete sequence Length = 92140 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 472 ctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||||||| | ||||||| Sbjct: 41924 ctcctcttcttcatcctcttcatcctcctc 41953
>dbj|AK059412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C11, full insert sequence Length = 1370 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 gctcgcgctctcctcctcctcg 174 |||||||||||||||||||||| Sbjct: 392 gctcgcgctctcctcctcctcg 413
>emb|Z71559.1|SCYNL283C S.cerevisiae chromosome XIV reading frame ORF YNL283c Length = 3584 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 2047 tcctcctcttcttcatcctctt 2026
>gb|DQ340567.1| Nicotiana benthamiana chloroplast photosystem II 22 kDa component (psbS1) gene, complete cds; nuclear gene for chloroplast product Length = 3207 Score = 44.1 bits (22), Expect = 0.45 Identities = 43/50 (86%) Strand = Plus / Plus Query: 322 ggtttcaccaaggagaacgagctcttcgtcggccgtgttgccatgattgg 371 |||||||| ||| | || |||||||| || ||||||||||| |||||||| Sbjct: 416 ggtttcactaagcaaaatgagctctttgttggccgtgttgctatgattgg 465
>gb|DQ340566.1| Nicotiana benthamiana chloroplast photosystem II 22 kDa component (psbS2) gene, complete cds; nuclear gene for chloroplast product Length = 3212 Score = 44.1 bits (22), Expect = 0.45 Identities = 43/50 (86%) Strand = Plus / Plus Query: 322 ggtttcaccaaggagaacgagctcttcgtcggccgtgttgccatgattgg 371 |||||||| ||| | || |||||||| || ||||||||||| |||||||| Sbjct: 396 ggtttcactaagcaaaatgagctctttgttggccgtgttgctatgattgg 445
>dbj|AP000272.2| Homo sapiens genomic DNA, chromosome 21 clone:CMF21-1G6, complete sequence Length = 30331 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 6453 cctcctcctcttcttcatcctc 6432
>dbj|AP001714.1| Homo sapiens genomic DNA, chromosome 21q, section 58/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 140946 cctcctcctcttcttcatcctc 140925
>gb|AC115761.12| Mus musculus chromosome 7, clone RP23-62N10, complete sequence Length = 215013 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcct 488 |||||||||||||||||||||| Sbjct: 107207 ccctcctcctcttcttcatcct 107186
>dbj|AB051495.2| Homo sapiens KIAA1708 mRNA, partial cds Length = 6170 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1802 cctcctcctcttcttcatcctc 1781
>gb|DQ332622.1| Synthetic construct Saccharomyces cerevisiae clone FLH201648.01X WSC2 gene, complete sequence Length = 1512 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 547 tcctcctcttcttcatcctctt 568
>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete sequence Length = 209191 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||| |||||||| ||||||| Sbjct: 29433 cctcctcctcttcttcttcctctttctcctcctc 29400 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||| Sbjct: 29406 cctcctcctcttcttcttcctctt 29383
>gb|U38371.1|HSU38371 Human HAP1-like protein (hHLP1) mRNA, complete cds Length = 960 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 49 cctcctcctcttcttcatcctc 28
>emb|CT572990.6| Mouse DNA sequence from clone RP24-393N9 on chromosome 12, complete sequence Length = 90243 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 61677 cccctcctcctcttcttcttcctctt 61652
>gb|AF040723.1|AF040723 Homo sapiens neuroan1 mRNA, complete cds Length = 3978 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 821 cctcctcctcttcttcatcctc 800
>emb|AL732610.16| Zebrafish DNA sequence from clone CH211-12N8, complete sequence Length = 176982 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 ||||||||||||| || ||||||||| ||||||| Sbjct: 138645 cctcctcctcttcatcctcctctttatcctcctc 138612 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 469 ctcctcctcttcttcatcctctttaccctcctc 501 ||||||||||||||| |||||||| ||||||| Sbjct: 138863 ctcctcctcttcttcctcctctttctcctcctc 138831
>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete sequence Length = 209214 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||| |||||||| ||||||| Sbjct: 129126 cctcctcctcttcttcctcctctttctcctcctc 129093
>emb|AL845267.2| Mouse DNA sequence from clone RP23-426D2 on chromosome 2, complete sequence Length = 216597 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 467 ccctcctcctcttcttcatcctcttt 492 ||||||||||||||||| |||||||| Sbjct: 116746 ccctcctcctcttcttcttcctcttt 116721
>gb|AC126037.4| Mus musculus BAC clone RP24-223I19 from 14, complete sequence Length = 189127 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 145050 cctcctcctcttcttcatcctc 145071
>gb|AC131189.3| Mus musculus BAC clone RP24-330P2 from 8, complete sequence Length = 157757 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 107275 cccctcctcctcttcttcctcctctt 107250
>emb|CT025608.12| Mouse DNA sequence from clone RP23-292F17 on chromosome 9, complete sequence Length = 200204 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 93238 cctcctcctcttcttcatcctc 93259
>emb|CT025639.13| Mouse DNA sequence from clone RP23-233I11 on chromosome 13, complete sequence Length = 219226 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcc 487 |||||||||||||||||||||| Sbjct: 160349 cccctcctcctcttcttcatcc 160370
>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence Length = 171495 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcct 488 |||||||||||||||||||||| Sbjct: 143255 ccctcctcctcttcttcatcct 143276
>gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, complete sequence Length = 167842 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 53373 cccctcctcctcttcttcctcctctt 53348
>emb|AM177179.1| Homo sapiens mRNA for kinesin-like protein KIF21A variant (KIF21A gene) Length = 4866 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 1813 cctcctcctcttcttcatcctc 1792
>emb|AL731665.23| Mouse DNA sequence from clone RP23-62L9 on chromosome 4, complete sequence Length = 160873 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||||| |||||||| ||||||| Sbjct: 59821 cctcctcctcttcttcctcctctttctcctcctc 59788 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctcctc 501 |||||||||||||| |||||||| ||||||| Sbjct: 59786 tcctcctcttcttcctcctctttctcctcctc 59755
>emb|AL772342.12| Mouse DNA sequence from clone RP23-105D19 on chromosome 2, complete sequence Length = 206806 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 59068 cccctcctcctcttcttcctcctctt 59043
>dbj|AB209105.1| Homo sapiens mRNA for huntingtin-associated protein 1 isoform 2 variant protein Length = 5667 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 808 cctcctcctcttcttcatcctc 787
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence Length = 219548 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctt 491 |||||||||||||||||||||| Sbjct: 155157 tcctcctcttcttcatcctctt 155178
>emb|AL772347.6| Mouse DNA sequence from clone RP23-160G19 on chromosome 2, complete sequence Length = 184583 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcctctt 491 ||||||||||||||||||||| |||| Sbjct: 19784 cccctcctcctcttcttcatcttctt 19759
>emb|AL670223.7| Mouse DNA sequence from clone RP23-29O24 on chromosome 4, complete sequence Length = 184644 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 169501 cctcctcctcttcttcatcctc 169522
>emb|AL772188.8| Mouse DNA sequence from clone RP23-143O19 on chromosome 2, complete sequence Length = 207403 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 ctcctcctcttcttcatcctct 490 |||||||||||||||||||||| Sbjct: 24447 ctcctcctcttcttcatcctct 24468
>gb|AC164161.2| Mus musculus BAC clone RP23-274G21 from chromosome 9, complete sequence Length = 198367 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 140034 cctcctcctcttcttcatcctc 140055
>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete sequence Length = 222330 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cccctcctcctcttcttcatcctctt 491 |||||||||||||||||| ||||||| Sbjct: 67811 cccctcctcctcttcttcctcctctt 67836
>emb|AJ224877.1|HSAJ4877 Homo sapiens hap1 gene, complete CDS Length = 16068 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 2470 cctcctcctcttcttcatcctc 2449
>dbj|AB004794.2| Xenopus laevis mRNA for DUF140, complete cds Length = 3988 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 3148 cctcctcctcttcttcatcctc 3127
>dbj|AP000180.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 7/21, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 42785 cctcctcctcttcttcatcctc 42764
>dbj|AP000104.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 7/20 Length = 100000 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctc 489 |||||||||||||||||||||| Sbjct: 42785 cctcctcctcttcttcatcctc 42764
>ref|NM_122171.2| Arabidopsis thaliana HD2B (HISTONE DEACETYLASE 2B) AT5G22650 (HD2B) transcript variant AT5G22650.2 mRNA, complete cds Length = 1200 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcctcctcttcttcatcctc 489 ||||||||||||||||||||| Sbjct: 654 ctcctcctcttcttcatcctc 634
>ref|NM_180725.1| Arabidopsis thaliana HD2B (HISTONE DEACETYLASE 2B) AT5G22650 (HD2B) transcript variant AT5G22650.1 mRNA, complete cds Length = 1195 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcctcctcttcttcatcctc 489 ||||||||||||||||||||| Sbjct: 668 ctcctcctcttcttcatcctc 648
>gb|AC116121.8| Mus musculus chromosome 8, clone RP23-79K4, complete sequence Length = 216001 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 141593 cctcctcctcttcttcctcctcttt 141569
>gb|AC169520.2| Mus musculus BAC clone RP23-35C6 from chromosome 19, complete sequence Length = 209374 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 184746 cctcctcctcttcttcttcctcttt 184722
>gb|AC165162.4| Mus musculus BAC clone RP23-173L24 from chromosome 3, complete sequence Length = 211699 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctc 498 ||||||||||| |||||||||||| |||| Sbjct: 13023 tcctcctcttcctcatcctctttatcctc 12995
>gb|AC166346.5| Mus musculus BAC clone RP24-83P13 from chromosome 16, complete sequence Length = 199678 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 138902 cctcctcctcttcttcctcctcttt 138926
>gb|AC166832.2| Mus musculus BAC clone RP23-220N17 from chromosome 16, complete sequence Length = 172644 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 169639 cctcctcctcttcttcctcctcttt 169663
>gb|AC109257.8| Mus musculus chromosome 7, clone RP23-362F15, complete sequence Length = 158694 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 87031 cctcctcctcttcttcctcctcttt 87007
>gb|BC063247.1| Mus musculus zinc finger protein of the cerebellum 1, mRNA (cDNA clone MGC:62379 IMAGE:5694793), complete cds Length = 3087 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctctt 491 ||||||||||||||||| ||||||| Sbjct: 623 ccctcctcctcttcttcctcctctt 647
>gb|BC060247.1| Mus musculus zinc finger protein of the cerebellum 1, mRNA (cDNA clone MGC:67128 IMAGE:6813617), complete cds Length = 2703 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctctt 491 ||||||||||||||||| ||||||| Sbjct: 241 ccctcctcctcttcttcctcctctt 265
>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence Length = 200423 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcct 488 ||||||||||||||||||||| Sbjct: 129008 cctcctcctcttcttcatcct 129028
>gb|AC166063.4| Mus musculus BAC clone RP23-21L22 from chromosome 19, complete sequence Length = 232698 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 77509 cctcctcctcttcttcttcctcttt 77533
>gb|BC081839.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:93599 IMAGE:7132958), complete cds Length = 2256 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctcctcg 502 ||||||||||| |||||||||| | |||||||| Sbjct: 659 tcctcctcttcctcatcctcttcatcctcctcg 627
>gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, complete sequence Length = 147125 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 469 ctcctcctcttcttcatcctctttaccctcctc 501 ||||||||||||||| |||||||| ||||||| Sbjct: 76330 ctcctcctcttcttcttcctctttctcctcctc 76362
>gb|AC110180.10| Mus musculus chromosome 19, clone RP24-358B11, complete sequence Length = 144511 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 466 cccctcctcctcttcttcatcctct 490 |||||||||||||||||| |||||| Sbjct: 40667 cccctcctcctcttcttcctcctct 40643
>gb|AC102285.7| Mus musculus chromosome 19, clone RP24-329P13, complete sequence Length = 174894 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 127969 cctcctcctcttcttcctcctcttt 127993 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 127916 cctcctcctcttcttcctcctcttt 127940
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 55609 cctcctcctcttcttcctcctcttt 55633
>gb|BC061779.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:72533 IMAGE:5623285), complete cds Length = 1214 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctcctcg 502 ||||||||||| |||||||||| | |||||||| Sbjct: 647 tcctcctcttcctcatcctcttcatcctcctcg 615
>ref|NM_003412.3| Homo sapiens Zic family member 1 (odd-paired homolog, Drosophila) (ZIC1), mRNA Length = 5231 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctctt 491 ||||||||||||||||| ||||||| Sbjct: 596 ccctcctcctcttcttcctcctctt 620
>gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome 19, complete sequence Length = 209035 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctctt 491 ||||||||||||||||| ||||||| Sbjct: 123485 ccctcctcctcttcttcctcctctt 123509 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctctt 491 ||||||||||||||||| ||||||| Sbjct: 123214 ccctcctcctcttcttcctcctctt 123238
>gb|AC146098.3| Pan troglodytes BAC clone RP43-51J12 from 7, complete sequence Length = 195811 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcct 488 ||||||||||||||||||||| Sbjct: 188870 cctcctcctcttcttcatcct 188890
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 tcctcctcttcttcatcctctttaccctc 498 |||||||| |||||||||||||| ||||| Sbjct: 101618 tcctcctcctcttcatcctcttttccctc 101590
>gb|AC120147.8| Mus musculus chromosome 19, clone RP24-223N20, complete sequence Length = 172853 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 tcctcctcttcttcatcctctttaccctcctcg 502 ||||||||||| |||||||||| | |||||||| Sbjct: 97038 tcctcctcttcctcatcctcttcatcctcctcg 97070
>gb|AC163746.5| Mus musculus BAC clone RP23-394B5 from chromosome 17, complete sequence Length = 199852 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||| |||||||||||||||||||| Sbjct: 196624 cctcatcctcttcttcatcctcttt 196600
>gb|AY539907.1| Rattus norvegicus LRRGT00156 mRNA, complete cds Length = 183 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 97 cctcctcctcttcttcctcctcttt 73
>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete sequence Length = 225721 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 104790 cctcctcctcttcttcctcctcttt 104814 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 104701 cctcctcctcttcttcctcctcttt 104725
>gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosome 17, complete sequence Length = 206180 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcct 488 ||||||||||||||||||||| Sbjct: 44370 cctcctcctcttcttcatcct 44350
>gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome 14, complete sequence Length = 181842 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 100959 cctcctcctcttcttcctcctcttt 100983
>gb|AC000121.1| Homo sapiens BAC clone CTA-249A12 from 7, complete sequence Length = 93163 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 465 gcccctcctcctcttcttcatcctc 489 ||||||||||||||||||| ||||| Sbjct: 8867 gcccctcctcctcttcttcctcctc 8891
>ref|XR_003360.1| PREDICTED: Mus musculus hypothetical protein LOC671300 (LOC671300), mRNA Length = 329 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 67 cctcctcctcttcttcctcctcttt 43
>gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosome 19, complete sequence Length = 182582 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 150926 cctcctcctcttcttcctcctcttt 150902
>gb|DQ483833.1| Gymnogyps californianus clone 256F microsatellite sequence Length = 1251 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 621 cctcctcctcttcttcttcctcttt 597 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||| Sbjct: 302 cctcctcctcttcttcctcctctt 279
>gb|DQ483952.1| Gymnogyps californianus clone 118G microsatellite sequence Length = 470 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||| |||||||||||||| Sbjct: 417 cctcctcctcctcttcatcctcttt 393
>emb|CR955008.2| Medicago truncatula chromosome 5 clone mte1-51b2, COMPLETE SEQUENCE Length = 110446 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 24435 cctcctcctcttcttcttcctcttt 24411
>gb|AC132148.3| Mus musculus BAC clone RP23-6N21 from chromosome 19, complete sequence Length = 191402 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 96 cctcctcctcttcttcctcctcttt 72
>gb|AC132452.3| Mus musculus BAC clone RP23-195K10 from chromosome 19, complete sequence Length = 218688 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctctt 491 ||||||||||||||||| ||||||| Sbjct: 79702 ccctcctcctcttcttcctcctctt 79726 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 79565 cctcctcctcttcttcctcctcttt 79589 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctctt 491 |||||||||||||||| ||||||| Sbjct: 79727 cctcctcctcttcttcctcctctt 79750
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence Length = 176369 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 162748 cctcctcctcttcttcctcctcttt 162724
>ref|XM_816281.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511127.369) partial mRNA Length = 1320 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 691 cctcctcctcttcttcctcctcttt 667
>gb|AC125535.4| Mus musculus BAC clone RP24-69I6 from chromosome 12, complete sequence Length = 178473 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 469 ctcctcctcttcttcatcctctttaccctcctc 501 ||||||||||||||| ||||| || |||||||| Sbjct: 75161 ctcctcctcttcttcttcctccttcccctcctc 75193
>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence Length = 178746 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 147898 cctcctcctcttcttcctcctcttt 147922
>gb|AC137605.3| Mus musculus BAC clone RP23-117H14 from 19, complete sequence Length = 180560 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 78690 cctcctcctcttcttcctcctcttt 78714
>gb|AC125191.4| Mus musculus BAC clone RP23-262C22 from 16, complete sequence Length = 196580 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 469 ctcctcctcttcttcatcctctttaccctcctc 501 ||||||||||||||| |||||||| ||||||| Sbjct: 66445 ctcctcctcttcttcttcctctttctcctcctc 66413
>ref|NM_009573.3| Mus musculus zinc finger protein of the cerebellum 1 (Zic1), mRNA Length = 3350 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccctcctcctcttcttcatcctctt 491 ||||||||||||||||| ||||||| Sbjct: 661 ccctcctcctcttcttcctcctctt 685
>gb|AC122904.2| Mus musculus BAC clone RP23-46H15 from 1, complete sequence Length = 139848 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcct 488 ||||||||||||||||||||| Sbjct: 119498 cctcctcctcttcttcatcct 119478
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 cctcctcctcttcttcatcctcttt 492 |||||||||||||||| |||||||| Sbjct: 182708 cctcctcctcttcttcctcctcttt 182684 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,495,737 Number of Sequences: 3902068 Number of extensions: 4495737 Number of successful extensions: 163672 Number of sequences better than 10.0: 1369 Number of HSP's better than 10.0 without gapping: 1375 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 155652 Number of HSP's gapped (non-prelim): 8009 length of query: 518 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 495 effective length of database: 17,143,297,704 effective search space: 8485932363480 effective search space used: 8485932363480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)