ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63f20 |
|---|---|
| Clone Library Name | barley_pub |
>NORA_STAAW (P0A0J6) Quinolone resistance protein norA| Length = 388 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 5/148 (3%) Frame = +2 Query: 179 FSVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGI 358 F++ LI + + ++ +LP K++G +DLG L + I SP G Sbjct: 10 FNIFLIFLGIGLVIP-----VLPVYLKDLGLT----GSDLGLLVAAFALSQMIISPFGGT 60 Query: 359 LALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY 538 LA + ++ IG + +++S V +F ++ R I G+ +V+P + IAD Sbjct: 61 LADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGGMSAGMVMPGVTGLIADIS 120 Query: 539 KDGTRGAGFGLLSLIGAVG-----GIGG 607 + FG +S I G GIGG Sbjct: 121 PSHQKAKNFGYMSAIINSGFILGPGIGG 148
>NORA_STAAU (P0A0J7) Quinolone resistance protein norA| Length = 388 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 5/148 (3%) Frame = +2 Query: 179 FSVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGI 358 F++ LI + + ++ +LP K++G +DLG L + I SP G Sbjct: 10 FNIFLIFLGIGLVIP-----VLPVYLKDLGLT----GSDLGLLVAAFALSQMIISPFGGT 60 Query: 359 LALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY 538 LA + ++ IG + +++S V +F ++ R I G+ +V+P + IAD Sbjct: 61 LADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGGMSAGMVMPGVTGLIADIS 120 Query: 539 KDGTRGAGFGLLSLIGAVG-----GIGG 607 + FG +S I G GIGG Sbjct: 121 PSHQKAKNFGYMSAIINSGFILGPGIGG 148
>NORA_STAAS (Q6GBD5) Quinolone resistance protein norA| Length = 388 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 5/148 (3%) Frame = +2 Query: 179 FSVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGI 358 F++ LI + + ++ +LP K++G +DLG L + I SP G Sbjct: 10 FNIFLIFLGIGLVIP-----VLPVYLKDLGLT----GSDLGLLVAAFALSQMIISPFGGT 60 Query: 359 LALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY 538 LA + ++ IG + +++S V +F ++ R I G+ +V+P + IAD Sbjct: 61 LADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGGMSAGMVMPGVTGLIADIS 120 Query: 539 KDGTRGAGFGLLSLIGAVG-----GIGG 607 + FG +S I G GIGG Sbjct: 121 PSHQKAKNFGYMSAIINSGFILGPGIGG 148
>NORA_STAAR (Q6GIU7) Quinolone resistance protein norA| Length = 388 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 5/148 (3%) Frame = +2 Query: 179 FSVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGI 358 F++ LI + + ++ +LP K++G +DLG L + I SP G Sbjct: 10 FNIFLIFLGIGLVIP-----VLPVYLKDLGLT----GSDLGLLVAAFALSQMIISPFGGT 60 Query: 359 LALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY 538 LA + ++ IG + +++S V +F ++ R I G+ +V+P + IAD Sbjct: 61 LADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGGMSAGMVMPGVTGLIADVS 120 Query: 539 KDGTRGAGFGLLSLIGAVG-----GIGG 607 + FG +S I G GIGG Sbjct: 121 PSHQKAKNFGYMSAIINSGFILGPGIGG 148
>NORA_STAAN (P0A0J5) Quinolone resistance protein norA| Length = 388 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 5/148 (3%) Frame = +2 Query: 179 FSVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGI 358 F++ LI + + ++ +LP K++G +DLG L + I SP G Sbjct: 10 FNIFLIFLGIGLVIP-----VLPVYLKDLGLT----GSDLGLLVAAFALSQMIISPFGGT 60 Query: 359 LALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY 538 LA + ++ IG + +++S V +F ++ R I G+ +V+P + IAD Sbjct: 61 LADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGGMSAGMVMPGVTGLIADIS 120 Query: 539 KDGTRGAGFGLLSLIGAVG-----GIGG 607 + FG +S I G GIGG Sbjct: 121 PSHQKAKNFGYMSAIINSGFILGPGIGG 148
>NORA_STAAM (P0A0J4) Quinolone resistance protein norA| Length = 388 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 5/148 (3%) Frame = +2 Query: 179 FSVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGI 358 F++ LI + + ++ +LP K++G +DLG L + I SP G Sbjct: 10 FNIFLIFLGIGLVIP-----VLPVYLKDLGLT----GSDLGLLVAAFALSQMIISPFGGT 60 Query: 359 LALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY 538 LA + ++ IG + +++S V +F ++ R I G+ +V+P + IAD Sbjct: 61 LADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGGMSAGMVMPGVTGLIADIS 120 Query: 539 KDGTRGAGFGLLSLIGAVG-----GIGG 607 + FG +S I G GIGG Sbjct: 121 PSHQKAKNFGYMSAIINSGFILGPGIGG 148
>NORA_STAAC (Q5HHX4) Quinolone resistance protein norA| Length = 388 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 5/148 (3%) Frame = +2 Query: 179 FSVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGI 358 F++ LI + + ++ +LP K++G +DLG L + I SP G Sbjct: 10 FNIFLIFLGIGLVIP-----VLPVYLKDLGLT----GSDLGLLVAAFALSQMIISPFGGT 60 Query: 359 LALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY 538 LA + ++ IG + +++S V +F ++ R I G+ +V+P + IAD Sbjct: 61 LADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGGMSAGMVMPGVTGLIADIS 120 Query: 539 KDGTRGAGFGLLSLIGAVG-----GIGG 607 + FG +S I G GIGG Sbjct: 121 PSHQKAKNFGYMSAIINSGFILGPGIGG 148
>EMRB_ECOLI (P0AEJ0) Multidrug resistance protein B| Length = 512 Score = 52.4 bits (124), Expect = 1e-06 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%) Frame = +2 Query: 185 VSLILINLASIMERADENL----LPAVYKEVGAAFNAGP---TDLGYLNFVMNFLKSIAS 343 + I ++LA+ M+ D + +P + +G++ + G T G N +I+ Sbjct: 14 IMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVAN-------AISI 66 Query: 344 PLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSF 523 PL G LA + T+ +A+++ A GVS ++F+R I G+ +IP QS Sbjct: 67 PLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPLSQSL 126 Query: 524 IADSYKDGTRGAGFGLLSLIGAVGGIGG 607 + ++Y R L S+ V I G Sbjct: 127 LLNNYPPAKRSIALALWSMTVIVAPICG 154
>EMRB_ECO57 (P0AEJ1) Multidrug resistance protein B| Length = 512 Score = 52.4 bits (124), Expect = 1e-06 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%) Frame = +2 Query: 185 VSLILINLASIMERADENL----LPAVYKEVGAAFNAGP---TDLGYLNFVMNFLKSIAS 343 + I ++LA+ M+ D + +P + +G++ + G T G N +I+ Sbjct: 14 IMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVAN-------AISI 66 Query: 344 PLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSF 523 PL G LA + T+ +A+++ A GVS ++F+R I G+ +IP QS Sbjct: 67 PLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPLSQSL 126 Query: 524 IADSYKDGTRGAGFGLLSLIGAVGGIGG 607 + ++Y R L S+ V I G Sbjct: 127 LLNNYPPAKRSIALALWSMTVIVAPICG 154
>BMR1_BACSU (P33449) Multidrug resistance protein 1 (Multidrug-efflux| transporter 1) Length = 389 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%) Frame = +2 Query: 290 TDLGYLNFVMNFLKSIASPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFW 469 T +GY+ + I SP+AG + R ++ IG +F+++S G+ + + Sbjct: 41 TAVGYMVACFAITQLIVSPIAGRWVDRFGRKIMIVIGLLFFSVSEFLFGIGKTVEMLFIS 100 Query: 470 RAINGLGLAIVIPALQSFIADSYKDGTRGAGFGLLSLIGAVG-----GIGG 607 R + G+ ++P + +FIAD TR G +S + G GIGG Sbjct: 101 RMLGGISAPFIMPGVTAFIADITTIKTRPKALGYMSAAISTGFIIGPGIGG 151
>BMR2_BACSU (P39843) Multidrug resistance protein 2 (Multidrug-efflux| transporter 2) Length = 400 Score = 45.8 bits (107), Expect = 1e-04 Identities = 28/104 (26%), Positives = 48/104 (46%) Frame = +2 Query: 296 LGYLNFVMNFLKSIASPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRA 475 +GYL + I SP AG + R ++ +G + ++LS G+ H F R Sbjct: 47 MGYLVAAFAISQLITSPFAGRWVDRFGRKKMIILGLLIFSLSELIFGLGTHVSIFYFSRI 106 Query: 476 INGLGLAIVIPALQSFIADSYKDGTRGAGFGLLSLIGAVGGIGG 607 + G+ A ++PA+ +++AD R G +S + G I G Sbjct: 107 LGGVSAAFIMPAVTAYVADITTLKERSKAMGYVSAAISTGFIIG 150
>EMRY_ECOLI (P52600) Multidrug resistance protein Y| Length = 512 Score = 43.9 bits (102), Expect = 4e-04 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 7/145 (4%) Frame = +2 Query: 194 ILINLASIMERADENL----LPAVYKEVGAAFNAGP---TDLGYLNFVMNFLKSIASPLA 352 I ++LA+ M+ D + +P + +GA+ + G T G N +IA P+ Sbjct: 21 IALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVITSFGVAN-------AIAIPVT 73 Query: 353 GILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIAD 532 G LA + + F++LS+ +S + ++F+R + GL +IP QS + Sbjct: 74 GRLAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMAGPLIPLSQSLLLR 133 Query: 533 SYKDGTRGAGFGLLSLIGAVGGIGG 607 +Y R L S+ + I G Sbjct: 134 NYPPEKRTFALALWSMTVIIAPICG 158
>YJJL_ECOLI (P39398) Inner membrane transport protein yjjL| Length = 453 Score = 43.1 bits (100), Expect = 6e-04 Identities = 32/138 (23%), Positives = 55/138 (39%) Frame = +2 Query: 182 SVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGIL 361 + +++L+ A+++ D + L + T++G L V + IA G L Sbjct: 41 TTAMLLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPL 100 Query: 362 ALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSYK 541 +L +G FW+L G+ +F Q V R G+G A + P I D + Sbjct: 101 LDRKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVINDWFN 160 Query: 542 DGTRGAGFGLLSLIGAVG 595 RG G + +G Sbjct: 161 IKERGRPMGFFNAASTIG 178
>YHCA_BACSU (P54585) Hypothetical transport protein yhcA| Length = 532 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/133 (19%), Positives = 59/133 (44%), Gaps = 1/133 (0%) Frame = +2 Query: 185 VSLILINLASI-MERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGIL 361 +SL+++ +A + + ++ LL + F T + +L + + PL+ L Sbjct: 13 MSLLIVLMAGLFLAILNQTLLNVAMPHLMTEFGVSATTIQWLTTGYMLVNGVLIPLSAFL 72 Query: 362 ALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSYK 541 + + ++ + + L T G++ +F ++ R I +G I+ P + + I + Sbjct: 73 ITRFGQRSLFLVAMFCFTLGTLVCGIAPNFSTMLIGRLIQAVGGGILQPLVMTTILLIFP 132 Query: 542 DGTRGAGFGLLSL 580 +RG G G+ L Sbjct: 133 PESRGKGMGIFGL 145
>BAIG_EUBSP (P32369) Bile acid transporter| Length = 477 Score = 40.4 bits (93), Expect = 0.004 Identities = 33/138 (23%), Positives = 56/138 (40%) Frame = +2 Query: 176 GFSVSLILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAG 355 GF I L S++ L PA + G +N + +++ + + +P+ G Sbjct: 12 GFVPFAIAALLVSLIGGFTAVLGPAFVADQGIDYN----NTTWISLALAMSSAACAPILG 67 Query: 356 ILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADS 535 L R L +G V +A V+ ++ R I G+G A + P + ++I Sbjct: 68 KLGDVLGRRTTLLLGIVIFAAGNVLTAVATSLIFMLAARFIVGIGTAAISPIVMAYIVTE 127 Query: 536 YKDGTRGAGFGLLSLIGA 589 Y G FGL LI + Sbjct: 128 YPQEETGKAFGLYMLISS 145
>PHDK_NOCSK (O24723) Probable 1-hydroxy-2-naphthoate transporter| Length = 473 Score = 39.3 bits (90), Expect = 0.009 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Frame = +2 Query: 332 SIASPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPA 511 +I + ++G +A + R V +G V + L+T +G++ R I+ GL V+P Sbjct: 75 AIGALVSGPVADRWGRKGVTVVGFVLFCLATAGLGLTGDIHSFAALRIISCFGLGAVMPV 134 Query: 512 LQSFIADSYKDGTRG-------AGFGLLSLIGA 589 + +AD R AG G+ S+IGA Sbjct: 135 ALTIVADWMPKARRAQMVSIAFAGVGVGSIIGA 167
>YAN6_SCHPO (Q10072) Putative transporter C3H1.06c| Length = 589 Score = 38.5 bits (88), Expect = 0.016 Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 7/142 (4%) Frame = +2 Query: 206 LASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILALHYDRPA 385 L+ + D+ ++ + A + G + ++ ++ P GI++ R Sbjct: 98 LSIFLSALDQTVITTAIPTIVANLDGG-SSYSWIGTAYTLAQTSILPFCGIMSEVVGRKI 156 Query: 386 VLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLG-------LAIVIPALQSFIADSYKD 544 VL V + + G +Q+ +V RA+ G+G + IVI + Y Sbjct: 157 VLYTSIVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGITSLVTIVIADITPLQTRPYYT 216 Query: 545 GTRGAGFGLLSLIGAVGGIGGS 610 G G +GL S++G + IGG+ Sbjct: 217 GCMGVTWGLASVMGPL--IGGA 236
>YM8M_YEAST (Q03263) Hypothetical transport protein YMR279C| Length = 540 Score = 38.1 bits (87), Expect = 0.020 Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 3/137 (2%) Frame = +2 Query: 206 LASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILALHYDRPA 385 LA ++ +A + + + +FN+ + +L ++G L Y Sbjct: 78 LAQLLNQAGQTHALCIMNVLSKSFNSEANNQAWLMASFPLAAGSFILISGRLGDIYGLKK 137 Query: 386 VLAIGTVF---WALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSYKDGTRG 556 +L +G V W++ +G S + RA G+G+A ++P + + YK G+ Sbjct: 138 MLIVGYVIVIVWSIISGLSKYSNSDAFFITSRAFQGVGIAFILPNIMGLVGHVYKVGSFR 197 Query: 557 AGFGLLSLIGAVGGIGG 607 ++S IGA GG Sbjct: 198 KNI-VISFIGACAPTGG 213
>TCR_STAES (P62967) Tetracycline resistance protein| Length = 459 Score = 38.1 bits (87), Expect = 0.020 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 3/152 (1%) Frame = +2 Query: 164 KKIFGFSVSLIL-INLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIA 340 KK G S++ + + S +E +L ++ FN P ++N SI Sbjct: 6 KKFKGLFYSVLFWLCILSFFSVLNEMVLNVSLPDIANHFNTTPGITNWVNTAYMLTFSIG 65 Query: 341 SPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQ-HFRQVVFWRAINGLGLAIVIPALQ 517 + + G L+ + + +L IG L + + HF ++F R + G+G A + Sbjct: 66 TAVYGKLSDYINIKKLLIIGISLSCLGSLIAFIGHNHFFILIFGRLVQGVGSAAFPSLIM 125 Query: 518 SFIADSYKDGTRGAGFGLLSLIGAVG-GIGGS 610 +A + +G FG + I A+G G+G S Sbjct: 126 VVVARNITRKKQGKAFGFIGSIVALGEGLGPS 157
>TCR_STAAU (P02983) Tetracycline resistance protein (Tetracycline efflux| protein) Length = 459 Score = 38.1 bits (87), Expect = 0.020 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 3/152 (1%) Frame = +2 Query: 164 KKIFGFSVSLIL-INLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIA 340 KK G S++ + + S +E +L ++ FN P ++N SI Sbjct: 6 KKFKGLFYSVLFWLCILSFFSVLNEMVLNVSLPDIANHFNTTPGITNWVNTAYMLTFSIG 65 Query: 341 SPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQ-HFRQVVFWRAINGLGLAIVIPALQ 517 + + G L+ + + +L IG L + + HF ++F R + G+G A + Sbjct: 66 TAVYGKLSDYINIKKLLIIGISLSCLGSLIAFIGHNHFFILIFGRLVQGVGSAAFPSLIM 125 Query: 518 SFIADSYKDGTRGAGFGLLSLIGAVG-GIGGS 610 +A + +G FG + I A+G G+G S Sbjct: 126 VVVARNITRKKQGKAFGFIGSIVALGEGLGPS 157
>ATR1_YEAST (P13090) Aminotriazole resistance protein| Length = 542 Score = 37.7 bits (86), Expect = 0.027 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Frame = +2 Query: 347 LAGILALHYDRPAVLAIG---TVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQ 517 ++G L Y +L +G + W+L G S + RA GLG+A V+P + Sbjct: 124 ISGRLGDIYGLKKMLLVGYVLVIIWSLICGITKYSGSDTFFIISRAFQGLGIAFVLPNVL 183 Query: 518 SFIADSYKDGTRGAGFGLLSLIGAVGGIGGS 610 I + Y GT ++S +GA+ IG + Sbjct: 184 GIIGNIYVGGTFRKNI-VISFVGAMAPIGAT 213
>TCRB_BACSU (P23054) Tetracycline resistance protein| Length = 458 Score = 37.0 bits (84), Expect = 0.045 Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 4/142 (2%) Frame = +2 Query: 191 LILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILALH 370 LI + + S +E +L ++ FN P ++N SI + L G L+ Sbjct: 16 LIWLCVLSFFSVLNEMVLNVSLPDIANEFNKLPASANWVNTAFMLTFSIGTALYGKLSDQ 75 Query: 371 YDRPAVLAIGTVFWALST--GAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY-K 541 +L G + L + G VG S F ++ R I G+G A PAL + Y Sbjct: 76 LGIKNLLLFGIMVNGLGSIIGFVGHS-FFPILILARFIQGIGAA-AFPALVMVVVARYIP 133 Query: 542 DGTRGAGFGLLSLIGAVG-GIG 604 RG FGL+ + A+G G+G Sbjct: 134 KENRGKAFGLIGSLVAMGEGVG 155
>UNC17_CAEEL (P34711) Vesicular acetylcholine transporter unc-17 (Uncoordinated| protein 17) Length = 532 Score = 37.0 bits (84), Expect = 0.045 Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 5/110 (4%) Frame = +2 Query: 257 KEVGAAFNA--GPTDLGYLNFVMNFLKSIASPLAGILA--LHYDRPAVLAIGTVFWALST 424 +EVG N +LG+L L+ +P +G + + Y+ P +L + T+F++ + Sbjct: 87 REVGGRINFLDEELELGWLFASKALLQIFVNPFSGYIIDRVGYEIPMILGLCTMFFSTAI 146 Query: 425 GAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSY-KDGTRGAGFGL 571 A+G S + ++F R++ G G A + + IAD + ++ R A G+ Sbjct: 147 FALGKS--YGVLLFARSLQGFGSAFADTSGLAMIADRFTEENERSAALGI 194
>YCEI_BACSU (O34691) Hypothetical metabolite transport protein yceI| Length = 400 Score = 36.6 bits (83), Expect = 0.059 Identities = 26/135 (19%), Positives = 56/135 (41%) Frame = +2 Query: 206 LASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILALHYDRPA 385 L + + D +L + + +N P ++ ++ V + + + L G+LA R Sbjct: 18 LGWLFDAMDVGILSFIIAALHVEWNLSPEEMKWIGSVNSIGMAAGAFLFGLLADRIGRKK 77 Query: 386 VLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSYKDGTRGAGF 565 V I + +++ +G + R + G+GL +P + ++++ RG Sbjct: 78 VFIITLLCFSIGSGISAFVTSLSAFLILRFVIGMGLGGELPVASTLVSEAVVPEKRGRVI 137 Query: 566 GLLSLIGAVGGIGGS 610 LL AVG + + Sbjct: 138 VLLESFWAVGWLAAA 152
>EXUT_BACSU (O34456) Hexuronate transporter| Length = 422 Score = 35.4 bits (80), Expect = 0.13 Identities = 25/136 (18%), Positives = 57/136 (41%) Frame = +2 Query: 191 LILINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILALH 370 ++ + LA ++ D + L + T +G + + +I + L G+ + Sbjct: 10 ILFLFLAGVINYLDRSALSIAAPFIQDDLTLSATQMGLIFSSFSIGYAIFNFLGGVASDR 69 Query: 371 YDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSYKDGT 550 Y L + V W+L +GAV ++ F ++ R + G+G + + + + + Sbjct: 70 YGAKLTLFVAMVVWSLFSGAVALAFGFVSLLIIRILFGMGEGPLSATINKMVNNWFPPTQ 129 Query: 551 RGAGFGLLSLIGAVGG 598 R + G+ + +GG Sbjct: 130 RASVIGVTNSGTPLGG 145
>YWFA_BACSU (P39637) Hypothetical protein ywfA| Length = 412 Score = 34.3 bits (77), Expect = 0.29 Identities = 24/116 (20%), Positives = 49/116 (42%) Frame = +2 Query: 227 ADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILALHYDRPAVLAIGTV 406 ++E ++ + ++ AF++ + L + + I +PL L Y R L G + Sbjct: 32 SEELVISPLLPDLAKAFSSDVSVLALSISIYGVMIFIGAPLLVPLGDKYSRELSLLAGLM 91 Query: 407 FWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSYKDGTRGAGFGLL 574 + + T ++Q+ RA++GL +P + + D RG GL+ Sbjct: 92 IFIIGTVICALAQNIFFFFLGRALSGLAAGAFVPTAYAVVGDRVPYTYRGKVMGLI 147
>GLCP_SYNY3 (P15729) Glucose transport protein| Length = 468 Score = 33.9 bits (76), Expect = 0.38 Identities = 22/84 (26%), Positives = 37/84 (44%) Frame = +2 Query: 350 AGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIA 529 AG +A + R + + V + LS+ G+ +FWR + G+G+ ++IA Sbjct: 74 AGPIADRHGRIKTMILAAVLFTLSSIGSGLPFTIWDFIFWRVLGGIGVGAASVIAPAYIA 133 Query: 530 DSYKDGTRGAGFGLLSLIGAVGGI 601 + RG G L + V GI Sbjct: 134 EVSPAHLRGR-LGSLQQLAIVSGI 156
>PMRA_STRR6 (P0A4K5) Multi-drug resistance efflux pump pmrA| Length = 399 Score = 33.5 bits (75), Expect = 0.50 Identities = 24/89 (26%), Positives = 41/89 (46%) Frame = +2 Query: 332 SIASPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPA 511 ++ SP+ GILA Y R ++ + ++ G + + ++F R +NG+ A +P Sbjct: 61 ALFSPIWGILADKYGRKPMMIRAGLAMTITMGGLAFVPNIYWLIFLRLLNGV-FAGFVPN 119 Query: 512 LQSFIADSYKDGTRGAGFGLLSLIGAVGG 598 + IA G+ G LS G V G Sbjct: 120 ATALIASQVPKEKSGSALGTLS-TGVVAG 147
>PMRA_STRPN (P0A4K4) Multi-drug resistance efflux pump pmrA| Length = 399 Score = 33.5 bits (75), Expect = 0.50 Identities = 24/89 (26%), Positives = 41/89 (46%) Frame = +2 Query: 332 SIASPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPA 511 ++ SP+ GILA Y R ++ + ++ G + + ++F R +NG+ A +P Sbjct: 61 ALFSPIWGILADKYGRKPMMIRAGLAMTITMGGLAFVPNIYWLIFLRLLNGV-FAGFVPN 119 Query: 512 LQSFIADSYKDGTRGAGFGLLSLIGAVGG 598 + IA G+ G LS G V G Sbjct: 120 ATALIASQVPKEKSGSALGTLS-TGVVAG 147
>VACHT_RAT (Q62666) Vesicular acetylcholine transporter (VAChT) (Solute| carrier family 18 member 3) (rVAT) Length = 530 Score = 32.3 bits (72), Expect = 1.1 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2 Query: 296 LGYLNFVMNFLKSIASPLAG--ILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFW 469 +G L L+ + +PL+G I + YD P ++ +G +F ST ++ + + Sbjct: 124 IGVLFASKAILQLLVNPLSGPFIDRMSYDVPLLIGLGVMF--ASTVMFAFAEDYATLFAA 181 Query: 470 RAINGLGLAIVIPALQSFIADSYKD 544 R++ GLG A + + IAD Y + Sbjct: 182 RSLQGLGSAFADTSGIAMIADKYPE 206
>VACHT_HUMAN (Q16572) Vesicular acetylcholine transporter (VAChT) (Solute| carrier family 18 member 3) Length = 532 Score = 32.3 bits (72), Expect = 1.1 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2 Query: 296 LGYLNFVMNFLKSIASPLAG--ILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFW 469 +G L L+ + +PL+G I + YD P ++ +G +F ST ++ + + Sbjct: 124 IGVLFASKAILQLLVNPLSGPFIDRMSYDVPLLIGLGVMF--ASTVLFAFAEDYATLFAA 181 Query: 470 RAINGLGLAIVIPALQSFIADSYKD 544 R++ GLG A + + IAD Y + Sbjct: 182 RSLQGLGSAFADTSGIAMIADKYPE 206
>LGT_RHOBA (Q7UMF7) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 492 Score = 32.0 bits (71), Expect = 1.5 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = +2 Query: 344 PLAGI-LALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQS 520 P+ GI AL + AVLA V W G +G S RQ+ + + + L +V+P + Sbjct: 39 PIFGIGWALLFLLIAVLAY--VGWESRRGGLGASTAIRQIAGFAVMAAVILVVVVPRTEL 96 Query: 521 FIADSYKDGTRGAGFGLLSLIGAVGGIG 604 G G+G+ ++ A+ +G Sbjct: 97 VNTLGDPVGVAVRGYGMFLMLAAIASVG 124
>ARAE_BACSU (P96710) Arabinose-proton symporter (Arabinose transporter)| Length = 464 Score = 32.0 bits (71), Expect = 1.5 Identities = 19/83 (22%), Positives = 38/83 (45%) Frame = +2 Query: 347 LAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFI 526 ++G L+ + R +L + +A+S +SQ ++ R I GLG+ + ++I Sbjct: 79 ISGFLSDRFGRRKILMTAALLFAISAIVSALSQDVSTLIIARIIGGLGIGMGSSLSVTYI 138 Query: 527 ADSYKDGTRGAGFGLLSLIGAVG 595 ++ RG+ L L +G Sbjct: 139 TEAAPPAIRGSLSSLYQLFTILG 161
>FNX1_SCHPO (Q09752) Multidrug resistance protein fnx1| Length = 531 Score = 32.0 bits (71), Expect = 1.5 Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 1/135 (0%) Frame = +2 Query: 206 LASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILALHYDRPA 385 + + D ++ ++Y +G+ F + Y+ + PL G L+ + R Sbjct: 39 VGGFLSALDMTIVASLYPVIGSEFKL-MNNASYIVTAYLITNTAFQPLYGRLSDIFGRRP 97 Query: 386 VLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIADSYKDGTRGAGF 565 + + L T G+S+ ++ RA+ G+G + +D RG Sbjct: 98 TVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSIISSDIVSLRERGTWQ 157 Query: 566 GLLSLIGAVGG-IGG 607 G+ +++ +GG +GG Sbjct: 158 GITNIVWGIGGSLGG 172
>VACHT_MOUSE (O35304) Vesicular acetylcholine transporter (VAChT) (Solute| carrier family 18 member 3) Length = 530 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%) Frame = +2 Query: 296 LGYLNFVMNFLKSIASPLAG--ILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFW 469 +G L L+ + +PL+G I + YD P ++ +G +F ST ++ + Sbjct: 124 IGVLFASKAILQLLVNPLSGPFIDRMSYDVPLLIGLGVMF--ASTVMFAFAEDYATFFAA 181 Query: 470 RAINGLGLAIVIPALQSFIADSYKD 544 R++ GLG A + + IAD Y + Sbjct: 182 RSLQGLGSAFADTSGIAMIADKYPE 206
>PROP_STAHJ (Q4L3Q4) Putative proline/betaine transporter| Length = 468 Score = 31.2 bits (69), Expect = 2.5 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 11/100 (11%) Frame = +2 Query: 326 LKSIASPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFW--------RAIN 481 L+ I + GI+ Y R VL + ALST +GV ++ + W R + Sbjct: 72 LRPIGGIVFGIIGDKYGRKVVLTTTIILMALSTLTIGVLPNYDMIGLWAPALLLLARILQ 131 Query: 482 GLGLAIVIPALQSFIADSYKDGTR---GAGFGLLSLIGAV 592 G ++IA+ D R G+G + +L G + Sbjct: 132 GFSTGGEYAGAMTYIAEISPDKKRNSLGSGLEIGTLSGYI 171
>Y523_METJA (Q57943) Hypothetical protein MJ0523| Length = 234 Score = 30.8 bits (68), Expect = 3.3 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 15/111 (13%) Frame = +2 Query: 317 MNFLKSIASPLAGILALH------YDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAI 478 M LK+ LA IL ++ + AV+A G +F+ALS +GV W I Sbjct: 121 MEILKTSPKFLAIILIVYGAILSGFTGGAVIATGLLFYALSQRVIGVEISEELKTMWEGI 180 Query: 479 NGLGLAIVIPALQSFIA-----DSYKDGTRGAGFGLL----SLIGAVGGIG 604 +GL + FI D + AG GL+ S +G +G IG Sbjct: 181 SGLSGIAWALWIFGFIGFFVFPDKWLLCLLMAGLGLVIKVGSKLGLIGYIG 231
>YJHB_ECOLI (P39352) Hypothetical metabolite transport protein yjhB| Length = 405 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +2 Query: 461 VFWRAINGLGLAIVIPALQSFIADSYKDGTRGAGFGLLSLIGAVGGI 601 +F LG+A ++P FI D + RG G GL+ +GA GG+ Sbjct: 313 LFGLMFTNLGIAGLVP---KFIYDYFPTKLRGLGTGLIYNLGATGGM 356
>BENK_ACIAD (O30513) Benzoate transport protein| Length = 466 Score = 30.4 bits (67), Expect = 4.2 Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Frame = +2 Query: 242 LPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILA-----LHYDRPAVLAIGTV 406 LP + KE + P G++ + F + + G +A L R V+A+ + Sbjct: 45 LPLLMKE----WAIDPVTAGFIGSIALFGMMFGALIFGTIADKLEHLGVSRKKVIAVCII 100 Query: 407 FWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQSFIAD 532 ++L T G S+ Q +R + G+G+ V+P + + +++ Sbjct: 101 LFSLCTVLCGFSETTTQFSIFRFLAGVGIGGVMPNVIALVSE 142
>EXUT_ECOLI (P0AA78) Hexuronate transporter| Length = 472 Score = 30.4 bits (67), Expect = 4.2 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 1/147 (0%) Frame = +2 Query: 164 KKIFGFSVSLI-LINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIA 340 +KI G +I L+ L +++ N + A + N Y+ + ++ Sbjct: 42 RKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTVM 101 Query: 341 SPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQS 520 P+AG + A+ V WA+ GA ++ + + R G A +IPA Sbjct: 102 QPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGLK 161 Query: 521 FIADSYKDGTRGAGFGLLSLIGAVGGI 601 ++ + R G ++ ++G + Sbjct: 162 ASSEWFPAKERSIAVGYFNVGSSIGAM 188
>EXUT_ECO57 (P0AA79) Hexuronate transporter| Length = 472 Score = 30.4 bits (67), Expect = 4.2 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 1/147 (0%) Frame = +2 Query: 164 KKIFGFSVSLI-LINLASIMERADENLLPAVYKEVGAAFNAGPTDLGYLNFVMNFLKSIA 340 +KI G +I L+ L +++ N + A + N Y+ + ++ Sbjct: 42 RKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTVM 101 Query: 341 SPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPALQS 520 P+AG + A+ V WA+ GA ++ + + R G A +IPA Sbjct: 102 QPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGLK 161 Query: 521 FIADSYKDGTRGAGFGLLSLIGAVGGI 601 ++ + R G ++ ++G + Sbjct: 162 ASSEWFPAKERSIAVGYFNVGSSIGAM 188
>YYAJ_BACSU (P37514) Hypothetical metabolite transport protein yyaJ| Length = 451 Score = 30.0 bits (66), Expect = 5.6 Identities = 16/87 (18%), Positives = 39/87 (44%) Frame = +2 Query: 335 IASPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFWRAINGLGLAIVIPAL 514 + + L G L+ R L + +++++ + ++ +R + G G+A + Sbjct: 81 LGASLGGRLSDRIGRKKALNLFVFVFSIASLCNAAAWDIPSLMTFRFLTGFGVAAAMVIT 140 Query: 515 QSFIADSYKDGTRGAGFGLLSLIGAVG 595 S++A+ + RG ++IG +G Sbjct: 141 DSYLAEFFPSSVRGKYISFCAMIGLIG 167
>VACHT_BRARE (P59845) Probable vesicular acetylcholine transporter (VAChT)| Length = 493 Score = 30.0 bits (66), Expect = 5.6 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%) Frame = +2 Query: 296 LGYLNFVMNFLKSIASPLAG--ILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFW 469 +G L L+ + +PL+G I + YD P L IG + LST ++++ + Sbjct: 85 IGVLFASKALLQLLVNPLSGTFIDRVGYDLP--LLIGLLVMFLSTCIFAFAENYGTLFAA 142 Query: 470 RAINGLGLAIVIPALQSFIADSY-KDGTRGAGFGL 571 R++ GLG A + + IAD + ++ R G+ Sbjct: 143 RSLQGLGSAFADTSGIAMIADKFTEEAERSRALGI 177
>PROP_STAEQ (Q5HRH0) Putative proline/betaine transporter| Length = 464 Score = 30.0 bits (66), Expect = 5.6 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 12/109 (11%) Frame = +2 Query: 302 YLNFVMNFL-KSIASPLAGILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFW--- 469 + F + FL + I + GI+ Y R VL + A ST +GV + ++ W Sbjct: 54 FATFAIAFLLRPIGGIVFGIIGDKYGRKIVLTTTIILMAFSTLLIGVLPTYNEIGVWAPI 113 Query: 470 -----RAINGLGLAIVIPALQSFIADSYKDGTR---GAGFGLLSLIGAV 592 R + G ++A+S D R G G + +L G + Sbjct: 114 LLLLARVLQGFSTGGEYAGAMVYVAESSPDRKRNSLGCGLEIGTLSGYI 162
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 30.0 bits (66), Expect = 5.6 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = -1 Query: 603 PIPPTAPMRLNKPNPAPRVPSL*LSAIND*SAGITMASPRPFIALQ 466 P PP P + +P P P PS+ A A +SP PFIA Q Sbjct: 764 PPPPPPPQQQQQPPPPPPPPSMPQQA-----APAMKSSPPPFIATQ 804
>MOT1_CRILO (Q03064) Monocarboxylate transporter 1 (MCT 1)| Length = 494 Score = 29.3 bits (64), Expect = 9.5 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Frame = +2 Query: 254 YKEVGAAFNAGPTDLGYLNFVMNFLKSIASPLAGILALHY-DRPAVLAIGTVFWALSTGA 430 +KE+ FNA +++ +++ +M + P++ +L Y RP ++A G + A Sbjct: 44 FKEIEGIFNATTSEVSWISSIMLAVMYAGGPISSVLVNKYGSRPVMIAGGCLSGCGLIAA 103 Query: 431 VGVSQHFRQVVFWRAINGLGLAIVI-PAL 514 + + I GLGLA + PAL Sbjct: 104 SFCNTVQELYLCIGVIGGLGLAFNLNPAL 132
>Y467_MYCLE (Q49642) Hypothetical protein ML0467| Length = 214 Score = 29.3 bits (64), Expect = 9.5 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +2 Query: 326 LKSIASPLAGILALHYDR-PAVLAIGTVFWALSTGAV 433 L+ +A PLAG L +HY R A G + WA T A+ Sbjct: 124 LRILAGPLAGALKMHYPRFLAANVSGAICWAGGTTAL 160
>VACHT_TORCA (P81721) Vesicular acetylcholine transporter (VAChT) (TorVAChT)| Length = 515 Score = 29.3 bits (64), Expect = 9.5 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2 Query: 296 LGYLNFVMNFLKSIASPLAG--ILALHYDRPAVLAIGTVFWALSTGAVGVSQHFRQVVFW 469 +G L L+ +++P G I + YD P ++ + +F++ T A G S + + Sbjct: 111 IGVLFASKAILQLLSNPFTGTFIDRVGYDIPLLIGLTIMFFSTITFAFGES--YAVLFAA 168 Query: 470 RAINGLGLAIVIPALQSFIADSYKD 544 R++ GLG A + + IAD Y + Sbjct: 169 RSLQGLGSAFADTSGIAMIADKYTE 193 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,552,523 Number of Sequences: 219361 Number of extensions: 1560056 Number of successful extensions: 6852 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 6168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6832 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
