Clone Name | bah63f17 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide pyrophosphatase/phosphodiesterase (npp gene) Length = 1268 Score = 1019 bits (514), Expect = 0.0 Identities = 529/534 (99%) Strand = Plus / Plus Query: 2 ctcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcggagagggacggatcaaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 ctcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcggagagggacggatcaaa 126 Query: 62 cgagttcgccaactaccagccggggtcgctcaacacgacggacaggctgattgaagactt 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 127 cgagttcgccaactaccagccggggtcgctcaacacgacggacaggctgattgaagatct 186 Query: 122 ggacaactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 ggacaactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctc 246 Query: 182 ccagtgggaccagttcaccgcacaggtcgcccccatcagcgccaagaaaccctacatggt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ccagtgggaccagttcaccgcacaggtcgcccccatcagcgccaagaaaccctacatggt 306 Query: 242 tgcaagcggcaaccacgagagggactggcccaacaccggcgggttcttcgacgtcaagga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 tgcaagcggcaaccacgagagggactggcccaacaccggcgggttcttcgacgtcaagga 366 Query: 302 ctccggcggcgaatgcggcgtgccggccgagaccatgtattactaccccgccgaaaacag 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 367 ctccggcggcgaatgcggcgtgccggccgagaccatgtactactaccccgccgaaaacag 426 Query: 362 agcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggactcgga 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ggcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggactcgga 486 Query: 422 gcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 gcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggt 546 Query: 482 ggaccggaagcaccagccgtggctcatcttcacggcgcaccgggttctgggcta 535 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 547 ggaccggaagcaccagccgtggctcatcttcacggcgcaccgggtgctgggcta 600
>ref|XM_483478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2234 Score = 662 bits (334), Expect = 0.0 Identities = 484/534 (90%) Strand = Plus / Plus Query: 2 ctcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcggagagggacggatcaaa 61 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 923 ctcgctgcaacgcatcatcgtcttcggcgacatgggcaaggcggagagagacggatcaaa 982 Query: 62 cgagttcgccaactaccagccggggtcgctcaacacgacggacaggctgattgaagactt 121 ||||||||||||||||||||| || || || |||||||||||||||||| | || || | Sbjct: 983 cgagttcgccaactaccagccaggatctctgaacacgacggacaggctggtcgaggatct 1042 Query: 122 ggacaactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctc 181 ||||||||||||||| |||||||||||||| || | || |||||||| || ||| |||| Sbjct: 1043 ggacaactacgacattgtcttccacatcggtgatcttccgtacgccaatggctacatctc 1102 Query: 182 ccagtgggaccagttcaccgcacaggtcgcccccatcagcgccaagaaaccctacatggt 241 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| | Sbjct: 1103 ccagtgggaccagttcaccgcccaggtcgcccccatcaccgccaagaagccctacatgat 1162 Query: 242 tgcaagcggcaaccacgagagggactggcccaacaccggcgggttcttcgacgtcaagga 301 ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1163 tgcaagcggtaaccatgagagggactggcccaacaccggagggttcttcgacgtcaagga 1222 Query: 302 ctccggcggcgaatgcggcgtgccggccgagaccatgtattactaccccgccgaaaacag 361 |||||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| || | Sbjct: 1223 ctccggcggcgagtgcggcgttccggcagagaccatgtactactacccggccgagaatcg 1282 Query: 362 agcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggactcgga 421 ||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1283 agccaacttctggtacaaggtggactacgggatgttccggttctgcatcgcggactcgga 1342 Query: 422 gcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggt 481 |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| Sbjct: 1343 gcacgactggagggagggtaccgaccagtacaagttcatcgagcagtgcctgtcgacggt 1402 Query: 482 ggaccggaagcaccagccgtggctcatcttcacggcgcaccgggttctgggcta 535 ||||||||||||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 1403 ggaccggaagcaccagccgtggctcatcttcgcggcgcaccgcgtgctgggcta 1456
>dbj|AK061879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E10, full insert sequence Length = 1355 Score = 662 bits (334), Expect = 0.0 Identities = 484/534 (90%) Strand = Plus / Plus Query: 2 ctcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcggagagggacggatcaaa 61 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 94 ctcgctgcaacgcatcatcgtcttcggcgacatgggcaaggcggagagagacggatcaaa 153 Query: 62 cgagttcgccaactaccagccggggtcgctcaacacgacggacaggctgattgaagactt 121 ||||||||||||||||||||| || || || |||||||||||||||||| | || || | Sbjct: 154 cgagttcgccaactaccagccaggatctctgaacacgacggacaggctggtcgaggatct 213 Query: 122 ggacaactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctc 181 ||||||||||||||| |||||||||||||| || | || |||||||| || ||| |||| Sbjct: 214 ggacaactacgacattgtcttccacatcggtgatcttccgtacgccaatggctacatctc 273 Query: 182 ccagtgggaccagttcaccgcacaggtcgcccccatcagcgccaagaaaccctacatggt 241 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| | Sbjct: 274 ccagtgggaccagttcaccgcccaggtcgcccccatcaccgccaagaagccctacatgat 333 Query: 242 tgcaagcggcaaccacgagagggactggcccaacaccggcgggttcttcgacgtcaagga 301 ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 334 tgcaagcggtaaccatgagagggactggcccaacaccggagggttcttcgacgtcaagga 393 Query: 302 ctccggcggcgaatgcggcgtgccggccgagaccatgtattactaccccgccgaaaacag 361 |||||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| || | Sbjct: 394 ctccggcggcgagtgcggcgttccggcagagaccatgtactactacccggccgagaatcg 453 Query: 362 agcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggactcgga 421 ||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 454 agccaacttctggtacaaggtggactacgggatgttccggttctgcatcgcggactcgga 513 Query: 422 gcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggt 481 |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| Sbjct: 514 gcacgactggagggagggtaccgaccagtacaagttcatcgagcagtgcctgtcgacggt 573 Query: 482 ggaccggaagcaccagccgtggctcatcttcacggcgcaccgggttctgggcta 535 ||||||||||||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 574 ggaccggaagcaccagccgtggctcatcttcgcggcgcaccgcgtgctgggcta 627
>dbj|AK072408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083H19, full insert sequence Length = 2233 Score = 662 bits (334), Expect = 0.0 Identities = 484/534 (90%) Strand = Plus / Plus Query: 2 ctcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcggagagggacggatcaaa 61 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 922 ctcgctgcaacgcatcatcgtcttcggcgacatgggcaaggcggagagagacggatcaaa 981 Query: 62 cgagttcgccaactaccagccggggtcgctcaacacgacggacaggctgattgaagactt 121 ||||||||||||||||||||| || || || |||||||||||||||||| | || || | Sbjct: 982 cgagttcgccaactaccagccaggatctctgaacacgacggacaggctggtcgaggatct 1041 Query: 122 ggacaactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctc 181 ||||||||||||||| |||||||||||||| || | || |||||||| || ||| |||| Sbjct: 1042 ggacaactacgacattgtcttccacatcggtgatcttccgtacgccaatggctacatctc 1101 Query: 182 ccagtgggaccagttcaccgcacaggtcgcccccatcagcgccaagaaaccctacatggt 241 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| | Sbjct: 1102 ccagtgggaccagttcaccgcccaggtcgcccccatcaccgccaagaagccctacatgat 1161 Query: 242 tgcaagcggcaaccacgagagggactggcccaacaccggcgggttcttcgacgtcaagga 301 ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1162 tgcaagcggtaaccatgagagggactggcccaacaccggagggttcttcgacgtcaagga 1221 Query: 302 ctccggcggcgaatgcggcgtgccggccgagaccatgtattactaccccgccgaaaacag 361 |||||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| || | Sbjct: 1222 ctccggcggcgagtgcggcgttccggcagagaccatgtactactacccggccgagaatcg 1281 Query: 362 agcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggactcgga 421 ||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1282 agccaacttctggtacaaggtggactacgggatgttccggttctgcatcgcggactcgga 1341 Query: 422 gcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggt 481 |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| Sbjct: 1342 gcacgactggagggagggtaccgaccagtacaagttcatcgagcagtgcctgtcgacggt 1401 Query: 482 ggaccggaagcaccagccgtggctcatcttcacggcgcaccgggttctgggcta 535 ||||||||||||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 1402 ggaccggaagcaccagccgtggctcatcttcgcggcgcaccgcgtgctgggcta 1455
>gb|AY107847.1| Zea mays PCO116807 mRNA sequence Length = 1174 Score = 365 bits (184), Expect = 1e-97 Identities = 360/416 (86%), Gaps = 2/416 (0%) Strand = Plus / Plus Query: 121 tggacaactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctct 180 ||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| ||| Sbjct: 20 tggacaactacgacatcgtgttccacatcggggacatgccctacgccaacggctacatct 79 Query: 181 cccagtgggaccagttcaccgcacaggtcgcccccatcagcgccaagaaaccctacatgg 240 | ||||||||||||||||| || ||||| || ||||||| |||| || |||||||||| Sbjct: 80 cgcagtgggaccagttcacggcgcaggtggcgcccatcaccgcccgcaagccctacatgg 139 Query: 241 ttgcaagcggcaaccacgagagggactggcccaacaccggcgg-gttcttcgacgtcaag 299 | | ||||||||||||||| ||||||||||| ||| |||||| ||||| ||||| | | Sbjct: 140 tgggcagcggcaaccacgagcgggactggcccgaca-cggcggcgttctgggacgtgatg 198 Query: 300 gactccggcggcgaatgcggcgtgccggccgagaccatgtattactaccccgccgaaaac 359 ||||| |||||||| |||||||| || ||||||||| || |||||||||||||| ||| Sbjct: 199 gactcgggcggcgagtgcggcgtccccgccgagacctactactactaccccgccgagaac 258 Query: 360 agagcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggactcg 419 | || |||||||||||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 259 cgggccaacttctggtacaaggtggactacggcatgttccgcttctgcgtgggcgactcg 318 Query: 420 gagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacg 479 |||||||||||| | | ||||| ||||||||| | ||||||||| | |||||||| ||| Sbjct: 319 gagcacgactggcgcgtcggcacgccgcagtacgacttcatcgagcactgcctgtccacg 378 Query: 480 gtggaccggaagcaccagccgtggctcatcttcacggcgcaccgggttctgggcta 535 |||||||| |||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 379 gtggaccgcaagcaccagccgtggctcatcttcgccacgcaccgcgtgctgggcta 434
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 236 bits (119), Expect = 6e-59 Identities = 152/163 (93%) Strand = Plus / Plus Query: 373 ggtacaaggtggactacgggatgttccggttctgcgtgggggactcggagcacgactgga 432 ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| Sbjct: 26437291 ggtacaaggtggactacgggatgttccggttctgcatcgcggactcggagcacgactgga 26437350 Query: 433 gggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagc 492 ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 26437351 gggagggtaccgaccagtacaagttcatcgagcagtgcctgtcgacggtggaccggaagc 26437410 Query: 493 accagccgtggctcatcttcacggcgcaccgggttctgggcta 535 |||||||||||||||||||| |||||||||| || |||||||| Sbjct: 26437411 accagccgtggctcatcttcgcggcgcaccgcgtgctgggcta 26437453 Score = 230 bits (116), Expect = 4e-57 Identities = 185/208 (88%) Strand = Plus / Plus Query: 40 aggcggagagggacggatcaaacgagttcgccaactaccagccggggtcgctcaacacga 99 |||||||||| |||||||||||||||||||||||||||||||| || || || ||||||| Sbjct: 26436330 aggcggagagagacggatcaaacgagttcgccaactaccagccaggatctctgaacacga 26436389 Query: 100 cggacaggctgattgaagacttggacaactacgacatcgtcttccacatcggcgacatgc 159 ||||||||||| | || || |||||||||||||||| |||||||||||||| || | | Sbjct: 26436390 cggacaggctggtcgaggatctggacaactacgacattgtcttccacatcggtgatcttc 26436449 Query: 160 cctacgccaacgggtacctctcccagtgggaccagttcaccgcacaggtcgcccccatca 219 | |||||||| || ||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 26436450 cgtacgccaatggctacatctcccagtgggaccagttcaccgcccaggtcgcccccatca 26436509 Query: 220 gcgccaagaaaccctacatggttgcaag 247 ||||||||| ||||||||| ||||||| Sbjct: 26436510 ccgccaagaagccctacatgattgcaag 26436537 Score = 167 bits (84), Expect = 5e-38 Identities = 120/132 (90%) Strand = Plus / Plus Query: 246 agcggcaaccacgagagggactggcccaacaccggcgggttcttcgacgtcaaggactcc 305 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 26436631 agcggtaaccatgagagggactggcccaacaccggagggttcttcgacgtcaaggactcc 26436690 Query: 306 ggcggcgaatgcggcgtgccggccgagaccatgtattactaccccgccgaaaacagagca 365 |||||||| |||||||| ||||| ||||||||||| |||||||| ||||| || |||| Sbjct: 26436691 ggcggcgagtgcggcgttccggcagagaccatgtactactacccggccgagaatcgagcc 26436750 Query: 366 aacttctggtac 377 |||||||||||| Sbjct: 26436751 aacttctggtac 26436762 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 2 ctcgctgcagcgtatcatcgtcttcggtgacatgggaaagg 42 ||||||||| || |||||||||||||| |||||||| |||| Sbjct: 26436078 ctcgctgcaacgcatcatcgtcttcggcgacatgggcaagg 26436118
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 236 bits (119), Expect = 6e-59 Identities = 152/163 (93%) Strand = Plus / Plus Query: 373 ggtacaaggtggactacgggatgttccggttctgcgtgggggactcggagcacgactgga 432 ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| Sbjct: 86843 ggtacaaggtggactacgggatgttccggttctgcatcgcggactcggagcacgactgga 86902 Query: 433 gggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagc 492 ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 86903 gggagggtaccgaccagtacaagttcatcgagcagtgcctgtcgacggtggaccggaagc 86962 Query: 493 accagccgtggctcatcttcacggcgcaccgggttctgggcta 535 |||||||||||||||||||| |||||||||| || |||||||| Sbjct: 86963 accagccgtggctcatcttcgcggcgcaccgcgtgctgggcta 87005 Score = 230 bits (116), Expect = 4e-57 Identities = 185/208 (88%) Strand = Plus / Plus Query: 40 aggcggagagggacggatcaaacgagttcgccaactaccagccggggtcgctcaacacga 99 |||||||||| |||||||||||||||||||||||||||||||| || || || ||||||| Sbjct: 85882 aggcggagagagacggatcaaacgagttcgccaactaccagccaggatctctgaacacga 85941 Query: 100 cggacaggctgattgaagacttggacaactacgacatcgtcttccacatcggcgacatgc 159 ||||||||||| | || || |||||||||||||||| |||||||||||||| || | | Sbjct: 85942 cggacaggctggtcgaggatctggacaactacgacattgtcttccacatcggtgatcttc 86001 Query: 160 cctacgccaacgggtacctctcccagtgggaccagttcaccgcacaggtcgcccccatca 219 | |||||||| || ||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 86002 cgtacgccaatggctacatctcccagtgggaccagttcaccgcccaggtcgcccccatca 86061 Query: 220 gcgccaagaaaccctacatggttgcaag 247 ||||||||| ||||||||| ||||||| Sbjct: 86062 ccgccaagaagccctacatgattgcaag 86089 Score = 167 bits (84), Expect = 5e-38 Identities = 120/132 (90%) Strand = Plus / Plus Query: 246 agcggcaaccacgagagggactggcccaacaccggcgggttcttcgacgtcaaggactcc 305 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86183 agcggtaaccatgagagggactggcccaacaccggagggttcttcgacgtcaaggactcc 86242 Query: 306 ggcggcgaatgcggcgtgccggccgagaccatgtattactaccccgccgaaaacagagca 365 |||||||| |||||||| ||||| ||||||||||| |||||||| ||||| || |||| Sbjct: 86243 ggcggcgagtgcggcgttccggcagagaccatgtactactacccggccgagaatcgagcc 86302 Query: 366 aacttctggtac 377 |||||||||||| Sbjct: 86303 aacttctggtac 86314 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 2 ctcgctgcagcgtatcatcgtcttcggtgacatgggaaagg 42 ||||||||| || |||||||||||||| |||||||| |||| Sbjct: 85630 ctcgctgcaacgcatcatcgtcttcggcgacatgggcaagg 85670
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 236 bits (119), Expect = 6e-59 Identities = 152/163 (93%) Strand = Plus / Plus Query: 373 ggtacaaggtggactacgggatgttccggttctgcgtgggggactcggagcacgactgga 432 ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| Sbjct: 166872 ggtacaaggtggactacgggatgttccggttctgcatcgcggactcggagcacgactgga 166931 Query: 433 gggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagc 492 ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 166932 gggagggtaccgaccagtacaagttcatcgagcagtgcctgtcgacggtggaccggaagc 166991 Query: 493 accagccgtggctcatcttcacggcgcaccgggttctgggcta 535 |||||||||||||||||||| |||||||||| || |||||||| Sbjct: 166992 accagccgtggctcatcttcgcggcgcaccgcgtgctgggcta 167034 Score = 230 bits (116), Expect = 4e-57 Identities = 185/208 (88%) Strand = Plus / Plus Query: 40 aggcggagagggacggatcaaacgagttcgccaactaccagccggggtcgctcaacacga 99 |||||||||| |||||||||||||||||||||||||||||||| || || || ||||||| Sbjct: 165911 aggcggagagagacggatcaaacgagttcgccaactaccagccaggatctctgaacacga 165970 Query: 100 cggacaggctgattgaagacttggacaactacgacatcgtcttccacatcggcgacatgc 159 ||||||||||| | || || |||||||||||||||| |||||||||||||| || | | Sbjct: 165971 cggacaggctggtcgaggatctggacaactacgacattgtcttccacatcggtgatcttc 166030 Query: 160 cctacgccaacgggtacctctcccagtgggaccagttcaccgcacaggtcgcccccatca 219 | |||||||| || ||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 166031 cgtacgccaatggctacatctcccagtgggaccagttcaccgcccaggtcgcccccatca 166090 Query: 220 gcgccaagaaaccctacatggttgcaag 247 ||||||||| ||||||||| ||||||| Sbjct: 166091 ccgccaagaagccctacatgattgcaag 166118 Score = 167 bits (84), Expect = 5e-38 Identities = 120/132 (90%) Strand = Plus / Plus Query: 246 agcggcaaccacgagagggactggcccaacaccggcgggttcttcgacgtcaaggactcc 305 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 166212 agcggtaaccatgagagggactggcccaacaccggagggttcttcgacgtcaaggactcc 166271 Query: 306 ggcggcgaatgcggcgtgccggccgagaccatgtattactaccccgccgaaaacagagca 365 |||||||| |||||||| ||||| ||||||||||| |||||||| ||||| || |||| Sbjct: 166272 ggcggcgagtgcggcgttccggcagagaccatgtactactacccggccgagaatcgagcc 166331 Query: 366 aacttctggtac 377 |||||||||||| Sbjct: 166332 aacttctggtac 166343 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 2 ctcgctgcagcgtatcatcgtcttcggtgacatgggaaagg 42 ||||||||| || |||||||||||||| |||||||| |||| Sbjct: 165659 ctcgctgcaacgcatcatcgtcttcggcgacatgggcaagg 165699
>dbj|AK106533.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-A11, full insert sequence Length = 2322 Score = 89.7 bits (45), Expect = 9e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 357 aacagagcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggac 416 ||||| ||||||| |||||||||| |||||||||||||||| | |||||||||| |||| Sbjct: 1530 aacagggcaaactactggtacaagacggactacgggatgttcagattctgcgtggcggac 1589 Query: 417 tcggagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcg 476 |||||||||||| |||| ||||| ||||||| |||||||||| ||||| | Sbjct: 1590 agcgagcacgactggcgggaaggcacggagcagtacgcgttcatcgagagctgcctcgcc 1649 Query: 477 acggtggaccggaagcaccagccgtggct 505 ||||||||||||||| | ||||| ||||| Sbjct: 1650 acggtggaccggaagaagcagccatggct 1678 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 27 ggtgacatgggaaaggcggagagggacggatcaaacgagttcgccaactaccagccgggg 86 ||||| ||||||||||| |||||||| ||| ||||||| | |||||||||||| || Sbjct: 1200 ggtgatatgggaaaggccgagagggatggaagcaacgagtacagcaactaccagcctgga 1259 Query: 87 tcgctcaacacgacggacaggctgattgaagacttggacaactacgacatcgtcttccac 146 || || ||||| || |||| ||||| | ||| | |||||| |||||| || || ||| Sbjct: 1260 tcactgaacacaactgacacactgatcaaggaccttgacaacatcgacattgtatttcac 1319 Query: 147 atcggcgacatgccctacgccaacgggtacctctcccagtgggaccagttcac 199 ||||| ||||| |||| |||||||||||| | ||||||||||| |||||||| Sbjct: 1320 atcggtgacattacctatgccaacgggtacatttcccagtgggatcagttcac 1372
>dbj|AK102346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C10, full insert sequence Length = 2294 Score = 89.7 bits (45), Expect = 9e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 357 aacagagcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggac 416 ||||| ||||||| |||||||||| |||||||||||||||| | |||||||||| |||| Sbjct: 1504 aacagggcaaactactggtacaagacggactacgggatgttcagattctgcgtggcggac 1563 Query: 417 tcggagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcg 476 |||||||||||| |||| ||||| ||||||| |||||||||| ||||| | Sbjct: 1564 agcgagcacgactggcgggaaggcacggagcagtacgcgttcatcgagagctgcctcgcc 1623 Query: 477 acggtggaccggaagcaccagccgtggct 505 ||||||||||||||| | ||||| ||||| Sbjct: 1624 acggtggaccggaagaagcagccatggct 1652 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 27 ggtgacatgggaaaggcggagagggacggatcaaacgagttcgccaactaccagccgggg 86 ||||| ||||||||||| |||||||| ||| ||||||| | |||||||||||| || Sbjct: 1174 ggtgatatgggaaaggccgagagggatggaagcaacgagtacagcaactaccagcctgga 1233 Query: 87 tcgctcaacacgacggacaggctgattgaagacttggacaactacgacatcgtcttccac 146 || || ||||| || |||| ||||| | ||| | |||||| |||||| || || ||| Sbjct: 1234 tcactgaacacaactgacacactgatcaaggaccttgacaacatcgacattgtatttcac 1293 Query: 147 atcggcgacatgccctacgccaacgggtacctctcccagtgggaccagttcac 199 ||||| ||||| |||| |||||||||||| | ||||||||||| |||||||| Sbjct: 1294 atcggtgacattacctatgccaacgggtacatttcccagtgggatcagttcac 1346
>dbj|AK073291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024B14, full insert sequence Length = 1832 Score = 89.7 bits (45), Expect = 9e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 357 aacagagcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggac 416 ||||| ||||||| |||||||||| |||||||||||||||| | |||||||||| |||| Sbjct: 1042 aacagggcaaactactggtacaagacggactacgggatgttcagattctgcgtggcggac 1101 Query: 417 tcggagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcg 476 |||||||||||| |||| ||||| ||||||| |||||||||| ||||| | Sbjct: 1102 agcgagcacgactggcgggaaggcacggagcagtacgcgttcatcgagagctgcctcgcc 1161 Query: 477 acggtggaccggaagcaccagccgtggct 505 ||||||||||||||| | ||||| ||||| Sbjct: 1162 acggtggaccggaagaagcagccatggct 1190 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 27 ggtgacatgggaaaggcggagagggacggatcaaacgagttcgccaactaccagccgggg 86 ||||| ||||||||||| |||||||| ||| ||||||| | |||||||||||| || Sbjct: 712 ggtgatatgggaaaggccgagagggatggaagcaacgagtacagcaactaccagcctgga 771 Query: 87 tcgctcaacacgacggacaggctgattgaagacttggacaactacgacatcgtcttccac 146 || || ||||| || |||| ||||| | ||| | |||||| |||||| || || ||| Sbjct: 772 tcactgaacacaactgacacactgatcaaggaccttgacaacatcgacattgtatttcac 831 Query: 147 atcggcgacatgccctacgccaacgggtacctctcccagtgggaccagttcac 199 ||||| ||||| |||| |||||||||||| | ||||||||||| |||||||| Sbjct: 832 atcggtgacattacctatgccaacgggtacatttcccagtgggatcagttcac 884
>dbj|AK073281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028M10, full insert sequence Length = 1519 Score = 89.7 bits (45), Expect = 9e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 357 aacagagcaaacttctggtacaaggtggactacgggatgttccggttctgcgtgggggac 416 ||||| ||||||| |||||||||| |||||||||||||||| | |||||||||| |||| Sbjct: 1295 aacagggcaaactactggtacaagacggactacgggatgttcagattctgcgtggcggac 1354 Query: 417 tcggagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcg 476 |||||||||||| |||| ||||| ||||||| |||||||||| ||||| | Sbjct: 1355 agcgagcacgactggcgggaaggcacggagcagtacgcgttcatcgagagctgcctcgcc 1414 Query: 477 acggtggaccggaagcaccagccgtggct 505 ||||||||||||||| | ||||| ||||| Sbjct: 1415 acggtggaccggaagaagcagccatggct 1443 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 27 ggtgacatgggaaaggcggagagggacggatcaaacgagttcgccaactaccagccgggg 86 ||||| ||||||||||| |||||||| ||| ||||||| | |||||||||||| || Sbjct: 965 ggtgatatgggaaaggccgagagggatggaagcaacgagtacagcaactaccagcctgga 1024 Query: 87 tcgctcaacacgacggacaggctgattgaagacttggacaactacgacatcgtcttccac 146 || || ||||| || |||| ||||| | ||| | |||||| |||||| || || ||| Sbjct: 1025 tcactgaacacaactgacacactgatcaaggaccttgacaacatcgacattgtatttcac 1084 Query: 147 atcggcgacatgccctacgccaacgggtacctctcccagtgggaccagttcac 199 ||||| ||||| |||| |||||||||||| | ||||||||||| |||||||| Sbjct: 1085 atcggtgacattacctatgccaacgggtacatttcccagtgggatcagttcac 1137
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 73.8 bits (37), Expect = 5e-10 Identities = 109/133 (81%) Strand = Plus / Minus Query: 373 ggtacaaggtggactacgggatgttccggttctgcgtgggggactcggagcacgactgga 432 |||||||| |||||||||||||||| | |||||||||| |||| |||||||||||| Sbjct: 6498 ggtacaagacggactacgggatgttcagattctgcgtggcggacagcgagcacgactggc 6439 Query: 433 gggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagc 492 |||| ||||| ||||||| |||||||||| ||||| | ||||||||||||||| Sbjct: 6438 gggaaggcacggagcagtacgcgttcatcgagagctgcctcgccacggtggaccggaaga 6379 Query: 493 accagccgtggct 505 | ||||| ||||| Sbjct: 6378 agcagccatggct 6366 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 125 caactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctccca 184 |||||||||| ||||||||||||||||||| | |||||||||| || | ||| | || Sbjct: 4361 caactacgacgccgtcttccacatcggcgacctctcctacgccaatggcttcctggcgca 4420 Query: 185 gtgggaccagttcac 199 ||||||||||||||| Sbjct: 4421 gtgggaccagttcac 4435 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 131 cgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctcccagtggga 190 |||||| || || |||||||| ||||| |||| |||||||||||| | ||||||||||| Sbjct: 7358 cgacattgtatttcacatcggtgacattacctatgccaacgggtacatttcccagtggga 7299 Query: 191 ccagttcac 199 |||||||| Sbjct: 7298 tcagttcac 7290 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 388 acgggatgttccggttctgcgtgggggactcggagcacgactgg 431 |||| |||||||| |||||||| || ||| |||||||||||||| Sbjct: 4627 acggcatgttccgcttctgcgtcggcgacacggagcacgactgg 4670 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 ccctacatggttgcaagcggcaaccacgag 260 ||||||||||| || ||||||||||||||| Sbjct: 4467 ccctacatggtggcgagcggcaaccacgag 4496 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 482 ggaccggaagcaccagccgtggct 505 |||||| ||||||||||||||||| Sbjct: 4721 ggaccgtaagcaccagccgtggct 4744
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 73.8 bits (37), Expect = 5e-10 Identities = 109/133 (81%) Strand = Plus / Minus Query: 373 ggtacaaggtggactacgggatgttccggttctgcgtgggggactcggagcacgactgga 432 |||||||| |||||||||||||||| | |||||||||| |||| |||||||||||| Sbjct: 70488 ggtacaagacggactacgggatgttcagattctgcgtggcggacagcgagcacgactggc 70429 Query: 433 gggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagc 492 |||| ||||| ||||||| |||||||||| ||||| | ||||||||||||||| Sbjct: 70428 gggaaggcacggagcagtacgcgttcatcgagagctgcctcgccacggtggaccggaaga 70369 Query: 493 accagccgtggct 505 | ||||| ||||| Sbjct: 70368 agcagccatggct 70356 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 125 caactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctccca 184 |||||||||| ||||||||||||||||||| | |||||||||| || | ||| | || Sbjct: 68323 caactacgacgccgtcttccacatcggcgacctctcctacgccaatggcttcctggcgca 68382 Query: 185 gtgggaccagttcac 199 ||||||||||||||| Sbjct: 68383 gtgggaccagttcac 68397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 131 cgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctcccagtggga 190 |||||| || || |||||||| ||||| |||| |||||||||||| | ||||||||||| Sbjct: 71348 cgacattgtatttcacatcggtgacattacctatgccaacgggtacatttcccagtggga 71289 Query: 191 ccagttcac 199 |||||||| Sbjct: 71288 tcagttcac 71280 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 388 acgggatgttccggttctgcgtgggggactcggagcacgactgg 431 |||| |||||||| |||||||| || ||| |||||||||||||| Sbjct: 68589 acggcatgttccgcttctgcgtcggcgacacggagcacgactgg 68632 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 ccctacatggttgcaagcggcaaccacgag 260 ||||||||||| || ||||||||||||||| Sbjct: 68429 ccctacatggtggcgagcggcaaccacgag 68458 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 482 ggaccggaagcaccagccgtggct 505 |||||| ||||||||||||||||| Sbjct: 68683 ggaccgtaagcaccagccgtggct 68706
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 73.8 bits (37), Expect = 5e-10 Identities = 109/133 (81%) Strand = Plus / Minus Query: 373 ggtacaaggtggactacgggatgttccggttctgcgtgggggactcggagcacgactgga 432 |||||||| |||||||||||||||| | |||||||||| |||| |||||||||||| Sbjct: 19287272 ggtacaagacggactacgggatgttcagattctgcgtggcggacagcgagcacgactggc 19287213 Query: 433 gggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagc 492 |||| ||||| ||||||| |||||||||| ||||| | ||||||||||||||| Sbjct: 19287212 gggaaggcacggagcagtacgcgttcatcgagagctgcctcgccacggtggaccggaaga 19287153 Query: 493 accagccgtggct 505 | ||||| ||||| Sbjct: 19287152 agcagccatggct 19287140 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 125 caactacgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctccca 184 |||||||||| ||||||||||||||||||| | |||||||||| || | ||| | || Sbjct: 19285107 caactacgacgccgtcttccacatcggcgacctctcctacgccaatggcttcctggcgca 19285166 Query: 185 gtgggaccagttcac 199 ||||||||||||||| Sbjct: 19285167 gtgggaccagttcac 19285181 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 131 cgacatcgtcttccacatcggcgacatgccctacgccaacgggtacctctcccagtggga 190 |||||| || || |||||||| ||||| |||| |||||||||||| | ||||||||||| Sbjct: 19288132 cgacattgtatttcacatcggtgacattacctatgccaacgggtacatttcccagtggga 19288073 Query: 191 ccagttcac 199 |||||||| Sbjct: 19288072 tcagttcac 19288064 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 388 acgggatgttccggttctgcgtgggggactcggagcacgactgg 431 |||| |||||||| |||||||| || ||| |||||||||||||| Sbjct: 19285373 acggcatgttccgcttctgcgtcggcgacacggagcacgactgg 19285416 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 ccctacatggttgcaagcggcaaccacgag 260 ||||||||||| || ||||||||||||||| Sbjct: 19285213 ccctacatggtggcgagcggcaaccacgag 19285242 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 482 ggaccggaagcaccagccgtggct 505 |||||| ||||||||||||||||| Sbjct: 19285467 ggaccgtaagcaccagccgtggct 19285490
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Plus Query: 420 gagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacg 479 |||| |||||||||| |||||| ||||||||||||||||||| | ||| | || | Sbjct: 5945857 gagctcgactggaggccaggcaccgagcagtacaagttcatcgagcactgcttctcctcc 5945916 Query: 480 gtggaccggaagcaccagccgtggctcatcttc 512 || |||||| || | |||||||||||||||||| Sbjct: 5945917 gtcgaccggcagaaacagccgtggctcatcttc 5945949
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Plus Query: 420 gagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacg 479 |||| |||||||||| |||||| ||||||||||||||||||| | ||| | || | Sbjct: 95479 gagctcgactggaggccaggcaccgagcagtacaagttcatcgagcactgcttctcctcc 95538 Query: 480 gtggaccggaagcaccagccgtggctcatcttc 512 || |||||| || | |||||||||||||||||| Sbjct: 95539 gtcgaccggcagaaacagccgtggctcatcttc 95571
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Plus Query: 420 gagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacg 479 |||| |||||||||| |||||| ||||||||||||||||||| | ||| | || | Sbjct: 4392 gagctcgactggaggccaggcaccgagcagtacaagttcatcgagcactgcttctcctcc 4451 Query: 480 gtggaccggaagcaccagccgtggctcatcttc 512 || |||||| || | |||||||||||||||||| Sbjct: 4452 gtcgaccggcagaaacagccgtggctcatcttc 4484
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Plus Query: 420 gagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacg 479 |||| |||||||||| |||||| ||||||||||||||||||| | ||| | || | Sbjct: 5945070 gagctcgactggaggccaggcaccgagcagtacaagttcatcgagcactgcttctcctcc 5945129 Query: 480 gtggaccggaagcaccagccgtggctcatcttc 512 || |||||| || | |||||||||||||||||| Sbjct: 5945130 gtcgaccggcagaaacagccgtggctcatcttc 5945162
>dbj|AK101976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076O10, full insert sequence Length = 2093 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Plus Query: 420 gagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacg 479 |||| |||||||||| |||||| ||||||||||||||||||| | ||| | || | Sbjct: 1427 gagctcgactggaggccaggcaccgagcagtacaagttcatcgagcactgcttctcctcc 1486 Query: 480 gtggaccggaagcaccagccgtggctcatcttc 512 || |||||| || | |||||||||||||||||| Sbjct: 1487 gtcgaccggcagaaacagccgtggctcatcttc 1519
>dbj|AK063756.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A07, full insert sequence Length = 1617 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Plus Query: 420 gagcacgactggagggagggcaccccgcagtacaagttcatcgaggagtgcctgtcgacg 479 |||| |||||||||| |||||| ||||||||||||||||||| | ||| | || | Sbjct: 934 gagctcgactggaggccaggcaccgagcagtacaagttcatcgagcactgcttctcctcc 993 Query: 480 gtggaccggaagcaccagccgtggctcatcttc 512 || |||||| || | |||||||||||||||||| Sbjct: 994 gtcgaccggcagaaacagccgtggctcatcttc 1026
>ref|NM_124422.2| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT5G50400 mRNA, complete cds Length = 1836 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 234 tacatggttgcaagcggcaaccacgagagggactggcc 271 |||||||| ||||| |||||||||||| |||| ||||| Sbjct: 1081 tacatggtcgcaagtggcaaccacgagcgggattggcc 1118
>ref|NM_118621.2| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT4G24890 mRNA, complete cds Length = 1875 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 166 ccaacgggtacctctcccagtgggaccagttcac 199 |||| ||||| |||||||||||||| |||||||| Sbjct: 1025 ccaatgggtatctctcccagtgggatcagttcac 1058
>gb|AY842027.1| Arabidopsis thaliana putative purple acid phosphatase (PAP27) mRNA, complete cds Length = 1836 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 234 tacatggttgcaagcggcaaccacgagagggactggcc 271 |||||||| ||||| |||||||||||| |||| ||||| Sbjct: 1081 tacatggtcgcaagtggcaaccacgagcgggattggcc 1118
>gb|AY842025.1| Arabidopsis thaliana putative purple acid phosphatase (PAP24) mRNA, complete cds Length = 1848 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 166 ccaacgggtacctctcccagtgggaccagttcac 199 |||| ||||| |||||||||||||| |||||||| Sbjct: 1025 ccaatgggtatctctcccagtgggatcagttcac 1058
>gb|AC011252.5| Drosophila melanogaster clone BACR23H21, complete sequence Length = 157965 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 310 gcgaatgcggcgtgccggccgagacc 335 |||||||||||||||| ||||||||| Sbjct: 71171 gcgaatgcggcgtgccagccgagacc 71146
>gb|AY142520.1| Arabidopsis thaliana unknown protein (At4g24890) mRNA, complete cds Length = 1879 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 166 ccaacgggtacctctcccagtgggaccagttcac 199 |||| ||||| |||||||||||||| |||||||| Sbjct: 1025 ccaatgggtatctctcccagtgggatcagttcac 1058
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 166 ccaacgggtacctctcccagtgggaccagttcac 199 |||| ||||| |||||||||||||| |||||||| Sbjct: 86878 ccaatgggtatctctcccagtgggatcagttcac 86845
>emb|AL035523.1|ATF13M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F13M23 (ESSAII project) Length = 99688 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 166 ccaacgggtacctctcccagtgggaccagttcac 199 |||| ||||| |||||||||||||| |||||||| Sbjct: 5130 ccaatgggtatctctcccagtgggatcagttcac 5097
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 166 ccaacgggtacctctcccagtgggaccagttcac 199 |||| ||||| |||||||||||||| |||||||| Sbjct: 57453 ccaatgggtatctctcccagtgggatcagttcac 57420
>ref|NM_141348.1| Drosophila melanogaster CG14677-RA (CG14677), mRNA Length = 2526 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 310 gcgaatgcggcgtgccggccgagacc 335 |||||||||||||||| ||||||||| Sbjct: 879 gcgaatgcggcgtgccagccgagacc 904
>gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 of 118 of the complete sequence Length = 305165 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 310 gcgaatgcggcgtgccggccgagacc 335 |||||||||||||||| ||||||||| Sbjct: 141004 gcgaatgcggcgtgccagccgagacc 140979
>ref|XM_463875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2337 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 acatcggcgacatgccctacgccaa 169 |||| |||||||||||||||||||| Sbjct: 1704 acatgggcgacatgccctacgccaa 1728
>ref|XM_506684.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1442_E05.16 mRNA Length = 2344 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 acatcggcgacatgccctacgccaa 169 |||| |||||||||||||||||||| Sbjct: 1708 acatgggcgacatgccctacgccaa 1732
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ccggcggcgaatgcggcgtgc 324 ||||||||||||||||||||| Sbjct: 2031031 ccggcggcgaatgcggcgtgc 2031011 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 cgagttcgccaactaccagccggg 85 |||||||||||||| ||||||||| Sbjct: 700209 cgagttcgccaactcccagccggg 700186
>emb|AJ421012.3|LLU421012 Lupinus luteus mRNA for putative metallophosphatase (ppd4 gene) Length = 2136 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 7 tgcagcgtatcatcgtcttcggtgacatgggaaaggc 43 |||||||| | ||| | |||||||||||||||||||| Sbjct: 1027 tgcagcgtgttatcatattcggtgacatgggaaaggc 1063
>dbj|AB190917.1| Oryza sativa (japonica cultivar-group) osysl7 mRNA for hypothetical protein, complete cds Length = 2052 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 acatcggcgacatgccctacgccaa 169 |||| |||||||||||||||||||| Sbjct: 1577 acatgggcgacatgccctacgccaa 1601
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 acatcggcgacatgccctacgccaa 169 |||| |||||||||||||||||||| Sbjct: 864246 acatgggcgacatgccctacgccaa 864270
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 acatcggcgacatgccctacgccaa 169 |||| |||||||||||||||||||| Sbjct: 73454 acatgggcgacatgccctacgccaa 73478
>dbj|AK100087.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B17, full insert sequence Length = 2337 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 acatcggcgacatgccctacgccaa 169 |||| |||||||||||||||||||| Sbjct: 1704 acatgggcgacatgccctacgccaa 1728
>dbj|AK070691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058J05, full insert sequence Length = 2343 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 acatcggcgacatgccctacgccaa 169 |||| |||||||||||||||||||| Sbjct: 1707 acatgggcgacatgccctacgccaa 1731
>gb|BC060203.1| Mus musculus caspase recruitment domain family, member 10, mRNA (cDNA clone MGC:73485 IMAGE:6855024), complete cds Length = 4748 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ggagcacgactggagggagg 438 |||||||||||||||||||| Sbjct: 1150 ggagcacgactggagggagg 1169
>ref|NM_130859.2| Mus musculus caspase recruitment domain family, member 10 (Card10), mRNA Length = 4748 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ggagcacgactggagggagg 438 |||||||||||||||||||| Sbjct: 1150 ggagcacgactggagggagg 1169
>ref|XM_652731.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0219.2), mRNA Length = 1797 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 cagtacaagttcatcgaggagtgc 470 ||||||||||||||||| |||||| Sbjct: 1216 cagtacaagttcatcgacgagtgc 1239
>ref|XM_001000894.1| PREDICTED: Mus musculus caspase recruitment domain family, member 10 (Card10), mRNA Length = 3522 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ggagcacgactggagggagg 438 |||||||||||||||||||| Sbjct: 1092 ggagcacgactggagggagg 1111
>ref|XM_984896.1| PREDICTED: Mus musculus caspase recruitment domain family, member 10 (Card10), mRNA Length = 621 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ggagcacgactggagggagg 438 |||||||||||||||||||| Sbjct: 51 ggagcacgactggagggagg 70
>gb|AF363456.1|AF363456 Mus musculus BIMP1 (Bimp1) mRNA, complete cds Length = 4438 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ggagcacgactggagggagg 438 |||||||||||||||||||| Sbjct: 999 ggagcacgactggagggagg 1018
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 446 gcagtacaagttcatcgaggagtgcctgtcgacggt 481 |||||| |||||||||||| | ||||||||| |||| Sbjct: 23853656 gcagtataagttcatcgagcaatgcctgtcgtcggt 23853621 Score = 40.1 bits (20), Expect = 7.2 Identities = 68/84 (80%) Strand = Plus / Minus Query: 446 gcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagcaccagccgtggct 505 ||||||||||||||||||| | ||||| ||| | || ||| || || | ||||| ||||| Sbjct: 23845161 gcagtacaagttcatcgagcaatgcctatcgtccgtcgacaggcagaagcagccatggct 23845102 Query: 506 catcttcacggcgcaccgggttct 529 ||| ||| |||||||| ||||| Sbjct: 23845101 catattccttgcgcaccgagttct 23845078
>gb|AC009204.5|AC009204 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone BACR03E19, complete sequence Length = 167777 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 atgggaaaggcggagaggga 52 |||||||||||||||||||| Sbjct: 41095 atgggaaaggcggagaggga 41076
>gb|AC009203.5|AC009203 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone BACR07J05, complete sequence Length = 172061 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 atgggaaaggcggagaggga 52 |||||||||||||||||||| Sbjct: 163736 atgggaaaggcggagaggga 163717
>gb|AC118019.11| Mus musculus chromosome 8, clone RP23-458N4, complete sequence Length = 185749 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 gaagcaccagccgtggctca 507 |||||||||||||||||||| Sbjct: 132616 gaagcaccagccgtggctca 132597
>dbj|AB095267.1| Babesia caballi BC134 mRNA for hypothetical protein, complete cds Length = 3227 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 gacttggacaactacgacatcgtcttcc 144 ||||||||||| |||||||||| ||||| Sbjct: 3099 gacttggacaagtacgacatcgacttcc 3126
>dbj|AK073512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043B10, full insert sequence Length = 2019 Score = 40.1 bits (20), Expect = 7.2 Identities = 68/84 (80%) Strand = Plus / Plus Query: 446 gcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagcaccagccgtggct 505 ||||||||||||||||||| | ||||| ||| | || ||| || || | ||||| ||||| Sbjct: 1337 gcagtacaagttcatcgagcaatgcctatcgtccgtcgacaggcagaagcagccatggct 1396 Query: 506 catcttcacggcgcaccgggttct 529 ||| ||| |||||||| ||||| Sbjct: 1397 catattccttgcgcaccgagttct 1420
>gb|AE003660.2| Drosophila melanogaster chromosome 2L, section 69 of 83 of the complete sequence Length = 232737 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 atgggaaaggcggagaggga 52 |||||||||||||||||||| Sbjct: 189496 atgggaaaggcggagaggga 189477
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 caccagccgtggctcatcttcacg 515 |||||||||| ||||||||||||| Sbjct: 2292444 caccagccgtcgctcatcttcacg 2292467
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 446 gcagtacaagttcatcgaggagtgcctgtcgacggt 481 |||||| |||||||||||| | ||||||||| |||| Sbjct: 23781861 gcagtataagttcatcgagcaatgcctgtcgtcggt 23781826 Score = 40.1 bits (20), Expect = 7.2 Identities = 68/84 (80%) Strand = Plus / Minus Query: 446 gcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagcaccagccgtggct 505 ||||||||||||||||||| | ||||| ||| | || ||| || || | ||||| ||||| Sbjct: 23773366 gcagtacaagttcatcgagcaatgcctatcgtccgtcgacaggcagaagcagccatggct 23773307 Query: 506 catcttcacggcgcaccgggttct 529 ||| ||| |||||||| ||||| Sbjct: 23773306 catattccttgcgcaccgagttct 23773283
>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144767 Score = 40.1 bits (20), Expect = 7.2 Identities = 68/84 (80%) Strand = Plus / Plus Query: 446 gcagtacaagttcatcgaggagtgcctgtcgacggtggaccggaagcaccagccgtggct 505 ||||||||||||||||||| | ||||| ||| | || ||| || || | ||||| ||||| Sbjct: 128022 gcagtacaagttcatcgagcaatgcctatcgtccgtcgacaggcagaagcagccatggct 128081 Query: 506 catcttcacggcgcaccgggttct 529 ||| ||| |||||||| ||||| Sbjct: 128082 catattccttgcgcaccgagttct 128105 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 446 gcagtacaagttcatcgaggagtgcctgtcgacggt 481 |||||| |||||||||||| | ||||||||| |||| Sbjct: 119527 gcagtataagttcatcgagcaatgcctgtcgtcggt 119562
>emb|AL592169.14| Mouse DNA sequence from clone RP23-305P10 on chromosome 15, complete sequence Length = 161985 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ggagcacgactggagggagg 438 |||||||||||||||||||| Sbjct: 131031 ggagcacgactggagggagg 131050
>gb|AY912081.1| Uncultured proteobacterium DelRiverFos13D03 clone DelRiverFos13D03, complete sequence Length = 34908 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tcgcccccatcagcgccaag 227 |||||||||||||||||||| Sbjct: 6894 tcgcccccatcagcgccaag 6875 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,553,768 Number of Sequences: 3902068 Number of extensions: 2553768 Number of successful extensions: 44629 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 44173 Number of HSP's gapped (non-prelim): 441 length of query: 535 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 512 effective length of database: 17,143,297,704 effective search space: 8777368424448 effective search space used: 8777368424448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)