>ELMO1_MOUSE (Q8BPU7) Engulfment and cell motility protein 1 (CED-12 homolog)|
          Length = 727

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
 Frame = +3

Query: 48  ANEEYLKALNALLSNF--PRLRVTEPATICIPHLVTSLKTGS----EATQEAALDSLYLL 209
           AN EY    +A  SNF        E     I  L TS    +    E  Q +++D+    
Sbjct: 44  ANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEA 103

Query: 210 RQAWSACPAEVFKAQSVAASEAIPLLQYLIQSGPPRFQEKAELLLQCLPGTLTVTI 377
            +  ++   +V  AQ     + I LL  +++SG  R+Q+  +++  C    L+ T+
Sbjct: 104 LKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTL 159

>ELMO1_HUMAN (Q92556) Engulfment and cell motility protein 1 (CED-12 homolog)|
          Length = 727

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
 Frame = +3

Query: 48  ANEEYLKALNALLSNF--PRLRVTEPATICIPHLVTSLKTGS----EATQEAALDSLYLL 209
           AN EY    +A  SNF        E     I  L TS    +    E  Q +++D+    
Sbjct: 44  ANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEA 103

Query: 210 RQAWSACPAEVFKAQSVAASEAIPLLQYLIQSGPPRFQEKAELLLQCLPGTLTVTI 377
            +  ++   +V  AQ     + I LL  +++SG  R+Q+  +++  C    L+ T+
Sbjct: 104 LKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTL 159

>RNH2_BACHD (Q9Z9S0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 263

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +3

Query: 3   EELLQSEKDIWASGSANEEYLKAL--NALLSNFPRLRVTEPATICIPHLVTSLKTGSEAT 176
           EE+L  EKD+WA G  +   L  +    L        V  P  + +P L  S K   E T
Sbjct: 59  EEMLAYEKDLWAKGYEHVAGLDEVGRGPLAGPVVTAAVILPKDVQLPGLTDSKKLAKE-T 117

Query: 177 QEAALDSLYLLRQAWS 224
           +E+  D +  +  AWS
Sbjct: 118 RESFYDRIKEVALAWS 133

>UN13C_RAT (Q62770) Unc-13 homolog C (Munc13-3)|
          Length = 2204

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +3

Query: 360  TLTVTIKRGNNLRQSVGNASAFCKLTLGNNPARLTKIVSTGESPEWDEAF 509
            T+TV   +G   +   G++  +  + +G N  R TK +    +P WDE F
Sbjct: 1213 TITVVSAQGLQAKDKTGSSDPYVTVQVGKNKRR-TKTIFGNLNPVWDEKF 1261

>UN13C_HUMAN (Q8NB66) Unc-13 homolog C (Munc13-3) (Fragment)|
          Length = 1190

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +3

Query: 360 TLTVTIKRGNNLRQSVGNASAFCKLTLGNNPARLTKIVSTGESPEWDEAF 509
           T+TV   +G   +   G++  +  + +G N  R TK +    +P WDE F
Sbjct: 199 TITVVSAQGLQAKDKTGSSDPYVTVQVGKNKRR-TKTIFGNLNPVWDEKF 247

>UN13C_MOUSE (Q8K0T7) Unc-13 homolog C (Munc13-3) (Fragment)|
          Length = 1430

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +3

Query: 360  TLTVTIKRGNNLRQSVGNASAFCKLTLGNNPARLTKIVSTGESPEWDEAF 509
            T+TV   +G   +   G++  +  + +G N  R TK +    +P WDE F
Sbjct: 1219 TITVVSAQGLQAKDKTGSSDPYVTVQVGKNKRR-TKTIFGNLNPVWDEKF 1267

>YKH3_SCHPO (Q9UT00) Hypothetical protein PYUK71.03c in chromosome I|
          Length = 1225

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 354 PGTLTVTIKRGNNLRQSVGNA-SAFCKLTLGNNPARLTKIVSTGESPEWDEAF 509
           PG L  T+ +   L        +A+ KL + N     T+ +    +P W+E+F
Sbjct: 570 PGVLQFTVHQCKELSNDPSKRPTAYAKLIINNKEVYTTRKIKKNNNPSWEESF 622

>BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell|
           apoptosis protein)
          Length = 611

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +3

Query: 45  SANEEYLKALNALLSNFPRLRVTEPATICIPHLVTSLKTGSEATQEAALDSLYLLRQAWS 224
           S + E +   +   S+FPR  VT  A   + HL + L+  S +T+EA L + +    AW 
Sbjct: 132 SPSFEQVGYFSGSFSSFPRDPVTTRAAEDLSHLRSKLQNPSMSTEEARLRTSH----AWP 187

Query: 225 AC---PAEVFKA 251
                PAEV KA
Sbjct: 188 LMCLWPAEVAKA 199

>SPEA_PROMM (Q7TUJ9) Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ADC)|
          Length = 648

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +3

Query: 96  PRLRVTEPATICIPHLVTSLKTGSEATQEAALDSLYLLRQAWSACPAEVFKAQSVAA 266
           P+  V EP TI   H +    +G  ATQ+ A+  +  L++AW+   A  FK  ++AA
Sbjct: 371 PKQTVEEPLTI---HNLRETLSGVMATQKGAVSEISRLQEAWN--DAIKFKEDALAA 422

>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 24/71 (33%), Positives = 34/71 (47%)
 Frame = +2

Query: 170 SNSRSSTGFTISAKTSMVGLPSGSV*SSISCCLRGYSSTSVLDTVWPTTVSREGRVATSV 349
           S+S SST  + SA +S   L S S+ S+ S      S +S + +  P T S     ATS 
Sbjct: 210 SSSLSSTAASNSATSS--SLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSA 267

Query: 350 LAWDTYSYYKT 382
            A  + + Y T
Sbjct: 268 SATSSSAQYNT 278

>TRRAP_MOUSE (Q80YV3) Transformation/transcription domain-associated protein (Tra1|
            homolog)
          Length = 2565

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +3

Query: 51   NEEYLKALNALLSNFPRLRVTEPATICIPHLVTSLKTGSEATQEAALDSLYLLRQAWSAC 230
            N + L+A+++LLS    +  TEP+T  +      L+    A  +   + L    +A SA 
Sbjct: 903  NTKVLRAVHSLLSRLMSIFPTEPSTSSVASKYEELECLYAAVGKVIYEGLTNYEKATSAN 962

Query: 231  PAEVF 245
            P+++F
Sbjct: 963  PSQLF 967

>SN_MOUSE (Q62230) Sialoadhesin precursor (Sialic acid-binding Ig-like|
            lectin-1) (Siglec-1) (Sheep erythrocyte receptor) (SER)
            (CD169 antigen)
          Length = 1694

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
 Frame = +2

Query: 275  YSSTSVLDTVWPTTVSREG-RVATSVLAWDT------YSYYKTWQQ---SEAISGKC*RI 424
            + + +V  TVWP    +EG +V  + L W T      Y++YK  QQ   + +I+    ++
Sbjct: 1077 FDAQAVRVTVWPNATVQEGQQVNLTCLVWSTHQDSLSYTWYKGGQQLLGARSITLPSVKV 1136

Query: 425  LQAYSWK 445
            L A S++
Sbjct: 1137 LDATSYR 1143

>FA62A_PONPY (Q5RAG2) Protein FAM62A|
          Length = 1104

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = +3

Query: 255  SVAASEAIPLLQYLIQSGPPRFQEKAELLLQCLPGTLTVTIKRGNNL--RQSVGNASAFC 428
            + A  E +  +  LIQ+     Q+ AEL        L++ ++R  +L  R+   + S + 
Sbjct: 773  TAAELEEVLQVNSLIQT-----QKSAELAA----ALLSIYMERAEDLPLRKGTKHPSPYA 823

Query: 429  KLTLGNNPARLTKIVSTGESPEWDEA 506
             LT+G+   + TK VS   +P WDE+
Sbjct: 824  TLTVGDTSHK-TKTVSQTSAPVWDES 848

>FA62A_HUMAN (Q9BSJ8) Protein FAM62A (Membrane bound C2 domain-containing protein)|
          Length = 1104

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
 Frame = +3

Query: 255  SVAASEAIPLLQYLIQSGPPRFQEKAELLLQCLPGTLTVTIKRGNNL--RQSVGNASAFC 428
            + A  E +  +  LIQ+     Q+ AEL        L++ ++R  +L  R+   + S + 
Sbjct: 773  TAAELEEVLQVNSLIQT-----QKSAELAA----ALLSIYMERAEDLPLRKGTKHLSPYA 823

Query: 429  KLTLGNNPARLTKIVSTGESPEWDEA 506
             LT+G++  + TK +S   +P WDE+
Sbjct: 824  TLTVGDSSHK-TKTISQTSAPVWDES 848


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,061,527
Number of Sequences: 219361
Number of extensions: 1255293
Number of successful extensions: 3221
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3220
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)