Clone Information

BLAST Search Result

Clone Name	bah63g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)	186	6e-47
2	CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)	186	6e-47
3	CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)	117	3e-26
4	CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)	114	2e-25
5	CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)	104	2e-22
6	CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)	104	2e-22
7	CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)	104	2e-22
8	CUL1_ARATH (Q94AH6) Cullin-1	93	7e-19
9	CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)	92	2e-18
10	CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 h...	84	3e-16
11	CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calc...	79	1e-14
12	CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)	79	1e-14
13	CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)	79	1e-14
14	CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calc...	79	1e-14
15	CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calciu...	78	2e-14
16	CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)	77	5e-14
17	CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)	77	5e-14
18	CUL6_CAEEL (Q21346) Cullin-6	74	3e-13
19	CUL4_SCHPO (O14122) Cullin-4 (Cul-4)	72	1e-12
20	CUL3_CAEEL (Q17391) Cullin-3	71	2e-12
21	CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A)...	71	3e-12
22	CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)	62	1e-09
23	CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)	62	1e-09
24	CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)	59	9e-09
25	CUL5_CAEEL (Q23639) Cullin-5	59	1e-08
26	CUL2_CAEEL (Q17390) Cullin-2	46	1e-04
27	COG3_MOUSE (Q8CI04) Conserved oligomeric Golgi complex component 3	35	0.23
28	COG3_HUMAN (Q96JB2) Conserved oligomeric Golgi complex component...	34	0.30
29	CAPP_THET8 (Q5SKL7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31...	33	0.51
30	CAPP_THET2 (Q72L05) Phosphoenolpyruvate carboxylase (EC 4.1.1.31...	33	0.51
31	DHB3_MOUSE (P70385) Estradiol 17-beta-dehydrogenase 3 (EC 1.1.1....	33	0.66
32	SYA_ANASP (Q8YUD4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	32	1.9
33	RPOA2_THEAC (Q03586) DNA-directed RNA polymerase subunit A'' (EC...	32	1.9
34	HAT1_CANGA (Q6FKS5) Histone acetyltransferase type B catalytic s...	31	2.5
35	DNAK_WOLTR (Q5GSE1) Chaperone protein dnaK (Heat shock protein 7...	31	2.5
36	LMX1A_MOUSE (Q9JKU8) LIM homeobox transcription factor 1 alpha (...	31	2.5
37	LMX1A_MESAU (Q04650) LIM homeobox transcription factor 1 alpha (...	31	2.5
38	LMX1A_HUMAN (Q8TE12) LIM homeobox transcription factor 1 alpha (...	31	2.5
39	G3P_STREQ (Q59906) Glyceraldehyde-3-phosphate dehydrogenase (EC ...	31	3.3
40	DYHC_NEUCR (P45443) Dynein heavy chain, cytosolic (DYHC)	31	3.3
41	UB2Q2_MOUSE (Q8K2Z8) Ubiquitin-conjugating enzyme E2 Q2 (EC 6.3....	30	4.3
42	KTN1_VULVU (O97961) Kinectin	30	5.6
43	DHB3_RAT (O54939) Estradiol 17-beta-dehydrogenase 3 (EC 1.1.1.62...	30	5.6
44	IL21R_HUMAN (Q9HBE5) Interleukin-21 receptor precursor (IL-21R) ...	30	5.6
45	SMUF1_XENLA (Q9PUN2) Smad ubiquitination regulatory factor 1 (EC...	30	7.3
46	MURB2_SYMTH (Q67Q47) UDP-N-acetylenolpyruvoylglucosamine reducta...	30	7.3
47	Y1851_PYRFU (Q8TZX4) Putative HTH-type transcriptional regulator...	30	7.3
48	RPOA2_THEVO (Q979F5) DNA-directed RNA polymerase subunit A'' (EC...	29	9.6
49	G6PD_CHLTR (O84188) Glucose-6-phosphate 1-dehydrogenase (EC 1.1....	29	9.6
50	TIG_GLOVI (Q7NDP0) Trigger factor (TF)	29	9.6
51	DYHC_FUSSO (P78716) Dynein heavy chain, cytosolic (DYHC)	29	9.6
52	BGAL_LEULA (Q02603) Beta-galactosidase large subunit (EC 3.2.1.2...	29	9.6

>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)|
          Length = 659

 Score =  186 bits (471), Expect = 6e-47
 Identities = 96/199 (48%), Positives = 136/199 (68%), Gaps = 1/199 (0%)
 Frame = +3

Query: 21  RXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYAT 200
           + ++ KT+ G+L LIE ER GEA+D++LL  LL M +DL +Y ++FE  FLE T+  YA 
Sbjct: 86  KMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQVYKDSFELKFLEETNCLYAA 145

Query: 201 EGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEK 380
           EG + +Q+ ++P+YL H   RL+EE DR I YL+ +T+KPLIA  EKQLL  H +AI++K
Sbjct: 146 EGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK 205

Query: 381 GFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTGQGIIMDEEKDKDLVPFL 557
           G   L++ NRV DL++MY LF RV    + L Q  S YI+  G  I+++ EKDKD+V  L
Sbjct: 206 GLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEYIKTFGTAIVINPEKDKDMVQDL 265

Query: 558 LEFKASLDKILEESFAKNE 614
           L+FK  +D ++E  F KNE
Sbjct: 266 LDFKDKVDHVIEVCFQKNE 284

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>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)|
          Length = 895

 Score =  186 bits (471), Expect = 6e-47
 Identities = 95/197 (48%), Positives = 135/197 (68%), Gaps = 1/197 (0%)
 Frame = +3

Query: 27  IEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYATEG 206
           +++KT+ G+L LIE ER GEAID++LL  LL M +DL +Y ++FE+ FLE T+  YA EG
Sbjct: 324 VQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEG 383

Query: 207 VKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKGF 386
            K +Q+ ++P+YL H   RL+EE DR I YL+  T+K LIAT EKQLL  H +AI++KG 
Sbjct: 384 QKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGL 443

Query: 387 TVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTGQGIIMDEEKDKDLVPFLLE 563
             L++ NR+ DLS +Y LF RV   +++L Q    YI+  G  I+++ EKDK +V  LL+
Sbjct: 444 NNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLD 503

Query: 564 FKASLDKILEESFAKNE 614
           FK  +D I++  F KNE
Sbjct: 504 FKDKVDHIIDICFLKNE 520

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>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)|
          Length = 768

 Score =  117 bits (292), Expect = 3e-26
 Identities = 66/208 (31%), Positives = 118/208 (56%), Gaps = 12/208 (5%)
 Frame = +3

Query: 15  CLRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM-----YSETFEKPFLEC 179
           C+R    +T   LL +I  ER GE +D+  + +  +M   LG+     Y E FE PFLE 
Sbjct: 156 CIRDHLRQT---LLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEM 212

Query: 180 TSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRH 359
           ++EF+  E  K+L ++    Y+K  E+R+ EE +R +  L+ +T +P++   E++L+ +H
Sbjct: 213 SAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKH 272

Query: 360 TSAIIE---KGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTGQGIIMDE 527
              I+E    G   +++  +  DL+ MY LF RV + ++ + + +S Y+R  G+ ++ +E
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEE 332

Query: 528 EKDK---DLVPFLLEFKASLDKILEESF 602
            + K   D +  LL+ K+  D+ L+ESF
Sbjct: 333 GEGKNPVDYIQGLLDLKSRFDRFLQESF 360

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>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)|
          Length = 768

 Score =  114 bits (285), Expect = 2e-25
 Identities = 66/208 (31%), Positives = 116/208 (55%), Gaps = 12/208 (5%)
 Frame = +3

Query: 15  CLRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM-----YSETFEKPFLEC 179
           C+R    +T   LL +I  ER GE +D+  + +  +M   LG+     Y E FE PFLE 
Sbjct: 156 CIRDHLRQT---LLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEM 212

Query: 180 TSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRH 359
           ++EF+  E  K+L ++    Y+K  E+R+ EE +R +  L+ +T +P++   E++L+ +H
Sbjct: 213 SAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKH 272

Query: 360 TSAIIE---KGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTGQGIIMDE 527
              I+E    G   +++  +  DL  MY LF RV + ++ + + +S Y+R  G+ ++ +E
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEE 332

Query: 528 EKDK---DLVPFLLEFKASLDKILEESF 602
            + K   D +  LL+ K+  D+ L ESF
Sbjct: 333 GEGKNPVDYIQGLLDLKSRFDRFLLESF 360

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>CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)|
          Length = 776

 Score =  104 bits (260), Expect = 2e-22
 Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
 Frame = +3

Query: 12  DCL-RXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM--------------Y 146
           DCL R +  +    +L+LIE ER GE I+  L+S +++ + +LG+              Y
Sbjct: 169 DCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVY 228

Query: 147 SETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLI 326
            E+FE  FL  T  FY  E  ++LQQ+ + +Y+K AE+RL EE  R  +YL  +T+  L 
Sbjct: 229 KESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELA 288

Query: 327 ATTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGT 503
              E+ L+++H   I    F  L++A++  DL RMY L  R+ D +  LK+ L  +I   
Sbjct: 289 RKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQ 347

Query: 504 GQGII 518
           G   I
Sbjct: 348 GLAAI 352

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>CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)|
          Length = 776

 Score =  104 bits (260), Expect = 2e-22
 Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
 Frame = +3

Query: 12  DCL-RXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM--------------Y 146
           DCL R +  +    +L+LIE ER GE I+  L+S +++ + +LG+              Y
Sbjct: 169 DCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVY 228

Query: 147 SETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLI 326
            E+FE  FL  T  FY  E  ++LQQ+ + +Y+K AE+RL EE  R  +YL  +T+  L 
Sbjct: 229 KESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELA 288

Query: 327 ATTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGT 503
              E+ L+++H   I    F  L++A++  DL RMY L  R+ D +  LK+ L  +I   
Sbjct: 289 RKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQ 347

Query: 504 GQGII 518
           G   I
Sbjct: 348 GLAAI 352

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>CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)|
          Length = 776

 Score =  104 bits (260), Expect = 2e-22
 Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
 Frame = +3

Query: 12  DCL-RXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM--------------Y 146
           DCL R +  +    +L+LIE ER GE I+  L+S +++ + +LG+              Y
Sbjct: 169 DCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVY 228

Query: 147 SETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLI 326
            E+FE  FL  T  FY  E  ++LQQ+ + +Y+K AE+RL EE  R  +YL  +T+  L 
Sbjct: 229 KESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELA 288

Query: 327 ATTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGT 503
              E+ L+++H   I    F  L++A++  DL RMY L  R+ D +  LK+ L  +I   
Sbjct: 289 RKCEQVLIEKHLE-IFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQ 347

Query: 504 GQGII 518
           G   I
Sbjct: 348 GLAAI 352

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>CUL1_ARATH (Q94AH6) Cullin-1|
          Length = 738

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
 Frame = +3

Query: 27  IEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM-----YSETFEKPFLECTSEF 191
           +  K    ++ L++ ER GE ID+ LL ++L ++ ++GM     Y E FE   L+ TS +
Sbjct: 144 LHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIGMGQMERYEEDFESFMLQDTSSY 203

Query: 192 YATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAI 371
           Y+ +   ++Q+   PDY+  +E  L++E +R   YL +++   L+   + +LL    S +
Sbjct: 204 YSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQL 263

Query: 372 IEK---GFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTGQGIIMDEE 530
           +EK   G   L+  ++V DLSRMY L+ ++   +E +      ++   G  ++   E
Sbjct: 264 LEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALVQQAE 320

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>CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)|
          Length = 780

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 25/221 (11%)
 Frame = +3

Query: 27  IEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM------------------YSE 152
           ++ K +  +L LI SER G  I+   +S +++   +LG+                  Y E
Sbjct: 171 LKDKVIDAMLELIRSERTGSMINSRYISGVVECLVELGVDDSETDAKKDAETKKLAVYKE 230

Query: 153 TFEKPFLECTSEFYATEGVKYLQQS-DIPDYLKHAESRLQEEHDRCILYLEANTRKPLIA 329
            FE  FLE T  FY  E   +L    ++ DY+   E+RL +E DRC LYL ++T+ PL  
Sbjct: 231 FFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTKTPLAT 290

Query: 330 TTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTG 506
             E  L+       +++ F  L+   R  DLSRM+ L  RV + ++ L+++L  +I   G
Sbjct: 291 CCESVLISNQLD-FLQRHFGGLLVDKRDDDLSRMFKLCDRVPNGLDELRKSLENHIAKEG 349

Query: 507 ----QGIIMDEEKDKDL-VPFLLEFKASLDKILEESFAKNE 614
               + + M+   D  L V  LLE       ++  SF KNE
Sbjct: 350 HQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSF-KNE 389

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>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)|
          Length = 767

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
 Frame = +3

Query: 6   HEDCLRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM------------YS 149
           H      I    +  LL +   +RL E  D   +   +   T L              Y 
Sbjct: 163 HHHVFSHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVDSITSLSFDKTDMTKPNLSSYK 222

Query: 150 ETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIA 329
             FE  F+E T  FYA E  +YL    I DYLK AE RL EE +   LYL  +T KPL+ 
Sbjct: 223 TFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLE 282

Query: 330 TTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTG 506
            TE  L+ +H   ++   F  +++ N   D+ RMY L  R  + ++ L+Q    +++ +G
Sbjct: 283 ATEDVLIAQH-EEVLHNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRSG 341

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>CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing|
           receptor) (VACM-1)
          Length = 780

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
 Frame = +3

Query: 6   HEDCLRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDL--------GMYSETFE 161
           +E     I+++     ++L+ +ERLGEA D  L+  + + + +L         +Y + FE
Sbjct: 144 NESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFE 203

Query: 162 KPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYL----EANTRKPLIA 329
           K +L+ T  FY T+   YLQQ+ + +Y+K+A+++L+EE  R + YL    E N+ + L+ 
Sbjct: 204 KAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALME 263

Query: 330 TTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTG 506
                L+      I+ +    +++ N    L  M++L  +V + IE + + L  +I   G
Sbjct: 264 CCVNALVTSFKETILAE-CQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAG 322

Query: 507 --------QGIIMDEEKDKDLVPFLLEFKASLDKILEESF 602
                   + I  D EK    V  LL       K+++E+F
Sbjct: 323 LADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAF 359

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>CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)|
          Length = 780

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
 Frame = +3

Query: 6   HEDCLRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDL--------GMYSETFE 161
           +E     I+++     ++L+ +ERLGEA D  L+  + + + +L         +Y + FE
Sbjct: 144 NESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFE 203

Query: 162 KPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYL----EANTRKPLIA 329
           K +L+ T  FY T+   YLQQ+ + +Y+K+A+++L+EE  R + YL    E N+ + L+ 
Sbjct: 204 KAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALME 263

Query: 330 TTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTG 506
                L+      I+ +    +++ N    L  M++L  +V + IE + + L  +I   G
Sbjct: 264 CCVNALVTSFKETILAE-CQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAG 322

Query: 507 --------QGIIMDEEKDKDLVPFLLEFKASLDKILEESF 602
                   + I  D EK    V  LL       K+++E+F
Sbjct: 323 LADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAF 359

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>CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)|
          Length = 780

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
 Frame = +3

Query: 6   HEDCLRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDL--------GMYSETFE 161
           +E     I+++     ++L+ +ERLGEA D  L+  + + + +L         +Y + FE
Sbjct: 144 NESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFE 203

Query: 162 KPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYL----EANTRKPLIA 329
           K +L+ T  FY T+   YLQQ+ + +Y+K+A+++L+EE  R + YL    E N+ + L+ 
Sbjct: 204 KAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALME 263

Query: 330 TTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTG 506
                L+      I+ +    +++ N    L  M++L  +V + IE + + L  +I   G
Sbjct: 264 CCVNALVTSFKETILAE-CQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAG 322

Query: 507 --------QGIIMDEEKDKDLVPFLLEFKASLDKILEESF 602
                   + I  D EK    V  LL       K+++E+F
Sbjct: 323 LADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAF 359

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>CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing|
           receptor) (VACM-1)
          Length = 780

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
 Frame = +3

Query: 6   HEDCLRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDL--------GMYSETFE 161
           +E     I+++     ++L+ +ERLGEA D  L+  + + + +L         +Y + FE
Sbjct: 144 NESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFE 203

Query: 162 KPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYL----EANTRKPLIA 329
           K +L+ T  FY T+   YLQQ+ + +Y+K+A+++L+EE  R + YL    E N+ + L+ 
Sbjct: 204 KAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALME 263

Query: 330 TTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTG 506
                L+      I+ +    +++ N    L  M++L  +V + IE + + L  +I   G
Sbjct: 264 CCVNALVTSFKETILAE-CQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAG 322

Query: 507 --------QGIIMDEEKDKDLVPFLLEFKASLDKILEESF 602
                   + I  D EK    V  LL       K+++E+F
Sbjct: 323 LADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAF 359

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>CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing|
           receptor) (VACM-1)
          Length = 780

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 21/220 (9%)
 Frame = +3

Query: 6   HEDCLRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDL--------GMYSETFE 161
           +E     I+++     ++L+ +ERLGEA D  L+  + + + +L         +Y + FE
Sbjct: 144 NESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFE 203

Query: 162 KPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYL----EANTRKPLIA 329
           K +L+ T  FY T+   YLQQ+ + +Y+K+A+++L+EE  R + YL    E N+ + L+ 
Sbjct: 204 KAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALME 263

Query: 330 TTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTG 506
                L+      I+ +    +++ N    L  M++L  +V   IE + + L  +I   G
Sbjct: 264 CCVNALVTSFKETILAE-CQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHIISAG 322

Query: 507 --------QGIIMDEEKDKDLVPFLLEFKASLDKILEESF 602
                   + I  D EK    V  LL       K+++E+F
Sbjct: 323 LADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAF 359

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>CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)|
          Length = 774

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
 Frame = +3

Query: 51  LLRLIESERLGEAIDKTLLSHLLKMFTDLG--------------MYSETFEKPFLECTSE 188
           +L+ IE ER G+ I+++L+  +++ + +L               +Y + FE  F+  TS 
Sbjct: 174 VLKSIEEERQGKLINRSLVRDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSA 233

Query: 189 FYATEGVKYLQQSDIPDYLKHAESRLQEEHDRC--------ILYLEANTRKPLIATTEKQ 344
           FY  E   +L  + + +YLKH E+RL+EE  R         + YL   T   L +T E+ 
Sbjct: 234 FYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEV 293

Query: 345 LLQRHTSAIIEKGFTVLMEANRVTDLSRMYTL 440
           L+++H   I    F  L+ A+R  DL RMY+L
Sbjct: 294 LIEKHLK-IFHTEFQNLLNADRNDDLKRMYSL 324

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>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)|
          Length = 785

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 11/172 (6%)
 Frame = +3

Query: 27  IEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLG-------MYSETFEKPFLECTS 185
           I  K V  +L L+  ER G  I++ L++  L M   L        +Y   F   FL  T 
Sbjct: 178 IGEKCVETILILVYLERKGNTINRPLINDCLDMLNSLPSENKKETLYDVLFAPKFLSYTR 237

Query: 186 EFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTS 365
            FY  E    +    + +YLK AE R +EE +R   YL      PL++  E +LL +H  
Sbjct: 238 NFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLD 297

Query: 366 AIIEK---GFTVLMEANRVTDLSRMYTLFQRVD-AIEMLKQALSLYIRGTGQ 509
            ++E    GF  +++++    L  +Y  F RV+  ++ LK+ L+ Y+   G+
Sbjct: 298 DLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAKYVAHHGK 349

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>CUL6_CAEEL (Q21346) Cullin-6|
          Length = 729

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
 Frame = +3

Query: 36  KTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYATEGVKY 215
           KT+  +L LI  ER G  I+ T +S +++  T+L +Y  +FE  FL+ T  FY  E +  
Sbjct: 149 KTIDAILELILLERCGSTINSTHISSVVECLTELDIYKVSFEPQFLDATKLFYKQEVLN- 207

Query: 216 LQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKGFTVL 395
             +  + +Y+   E+RL +E  R   YL  +T   LI + E  L+       +   F  L
Sbjct: 208 -SKETVIEYMITVENRLFQEEYRSRRYLGPSTNDLLIDSCESILISDRLK-FLHSEFERL 265

Query: 396 MEANRVTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTGQGIIMDEEKD-------KDLVP 551
           +EA +   L+RMY+L +RV   +E L+  L   I   G   +    KD       K+ + 
Sbjct: 266 LEARKDEHLTRMYSLCRRVTHGLEDLRVYLEKRILKEGHETLQRLAKDSGLKTTPKEYIT 325

Query: 552 FLLEFKASLDKILEESFAKN 611
            LLE       ++ ++F +N
Sbjct: 326 KLLEVHEIYFNLINKAFDRN 345

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>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)|
          Length = 734

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 53/199 (26%), Positives = 88/199 (44%)
 Frame = +3

Query: 18  LRXIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYA 197
           ++ I+   +  LL+  E+    ++ D   L   + M     MYS  F   +L   S FY 
Sbjct: 157 VKNIQIPFLNSLLQSFENLHSSKSTDHAYLQDAMLMLHRTEMYSSVFVPMYLVMLSRFYD 216

Query: 198 TEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIE 377
           TE  + +Q+  + +YL++A S L+ E      +     +K +  T ++ L+  H    + 
Sbjct: 217 TESSQKIQELPLEEYLEYAMSSLEREDAYVEKFDIVRDKKSIRETVQRCLITSHLDT-LT 275

Query: 378 KGFTVLMEANRVTDLSRMYTLFQRVDAIEMLKQALSLYIRGTGQGIIMDEEKDKDLVPFL 557
           KG +  +E         +Y L Q     E L Q  S  +   G  ++ DE KD  LV  L
Sbjct: 276 KGISQFIEKRDAHSCKLLYALLQFNHETEYLIQPWSDCLVDVGFKLVNDESKDDTLVQEL 335

Query: 558 LEFKASLDKILEESFAKNE 614
           L F   L  +++ESF  +E
Sbjct: 336 LSFHKFLQVVVDESFLHDE 354

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>CUL3_CAEEL (Q17391) Cullin-3|
          Length = 777

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
 Frame = +3

Query: 51  LLRLIESERLGEAIDKTLLSHLLKMFTDLGM-----YSETFEKPFLECTSEFYATEGVKY 215
           LL LI+ +R    I+   + +   M   LG+     Y + FE+P L+ TS++Y      +
Sbjct: 163 LLELIKLDRKSNQINWHGIKNACDMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNW 222

Query: 216 LQ-QSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAII---EKG 383
           L   +D   YL   E  + +E  R   YL+  T   ++   +  ++  H   I+     G
Sbjct: 223 LSGDNDACFYLAQVEIAMHDEASRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGG 282

Query: 384 FTVLMEANRVTDLSRMYTLFQRV--------DAIEMLKQALSLYIRGTGQGIIMDEEKDK 539
              ++E  ++ DL+R++ +F+R+          ++ L +A+S Y+  TG  I+ +E+  K
Sbjct: 283 VKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLKALLKAVSEYLNETGSNIVKNEDLLK 342

Query: 540 DLVPF---LLEFKASLDKILEESFA 605
           + V F   LL+ K     +L  +FA
Sbjct: 343 NPVNFVNELLQLKDYFSSLLTTAFA 367

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>CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A) (E3 ubiquitin|
           ligase complex SCF subunit CDC53)
          Length = 815

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
 Frame = +3

Query: 42  VTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGM------------YSETFEKPFLECTS 185
           +  LL  +   R G+ I ++ +S  +K    LG+            Y + FEKPFL+ T 
Sbjct: 174 INELLDQVTLGREGQIIQRSNISTAIKSLVALGIDPQDLKKLNLNVYIQVFEKPFLKKTQ 233

Query: 186 EFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTS 365
           E+Y      YL++  + +Y+  A   ++ E     +Y + +T+KPL     K L+  H  
Sbjct: 234 EYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTKKPLSMALNKVLITDHIE 293

Query: 366 AIIEKGFTVLMEANRVTDLSRMYTLFQR-VDAIEMLKQALSLYIRGTGQ----------- 509
             +E  F VL++A  +  ++ +Y L +R    I  +      Y++ TG+           
Sbjct: 294 K-LENEFVVLLDARDIEKITSLYALIRRDFTLIPRMASVFENYVKKTGENEISSLLAMHK 352

Query: 510 -GIIMDEEKD--------------KDLVPFLLEFKASLDKILEESF 602
             I+ +E  +              KD +  LLE      KI  ESF
Sbjct: 353 HNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKIFNESF 398

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>CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)|
          Length = 745

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
 Frame = +3

Query: 51  LLRLIESERLGEAIDKTLLSHLLKMFTD---------LGMYSETFEKPFLECTSEFYATE 203
           LLR I+++R GE  ++ ++  ++  F           L  Y E FE PFL  T E+Y  E
Sbjct: 163 LLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQE 222

Query: 204 GVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKG 383
               LQ+S+   Y++    RL++E  RC  YL  ++   +I   +++++  H   +  + 
Sbjct: 223 ASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHAEC 282

Query: 384 FTVLMEANRVTDLSRMYTLFQRVD-AIEMLKQALSLYIRGTG 506
             ++ +  +  D++ MY L + V   +  + Q L  +I   G
Sbjct: 283 HNIIRQEKK-NDMANMYVLLRAVSTGLPHMIQELQNHIHDEG 323

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>CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)|
          Length = 745

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
 Frame = +3

Query: 51  LLRLIESERLGEAIDKTLLSHLLKMFTD---------LGMYSETFEKPFLECTSEFYATE 203
           LLR I+++R GE  ++ ++  ++  F           L  Y E FE PFL  T E+Y  E
Sbjct: 163 LLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQE 222

Query: 204 GVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKG 383
               LQ+S+   Y++    RL++E  RC  YL  ++   +I   +++++  H   +  + 
Sbjct: 223 ASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHAEC 282

Query: 384 FTVLMEANRVTDLSRMYTLFQRVD-AIEMLKQALSLYIRGTG 506
             ++ +  +  D++ MY L + V   +  + Q L  +I   G
Sbjct: 283 HNIIRQEKK-NDMANMYVLLRAVSTGLPHMIQELQNHIHDEG 323

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>CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)|
          Length = 745

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
 Frame = +3

Query: 51  LLRLIESERLGEAIDKTLLSHLLKMFTDLGMYSETFE---------KPFLECTSEFYATE 203
           LLR I+++R GE  ++ ++  ++  F  +  Y + F           PFL  T E+Y  E
Sbjct: 163 LLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQGIFVSPFLTETGEYYKQE 222

Query: 204 GVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKG 383
               LQ+S+   Y++    RL++E  RC  YL  ++   +I   +++++  H   +  + 
Sbjct: 223 ASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHSEC 282

Query: 384 FTVLMEANRVTDLSRMYTLFQRVDA 458
            +++ +  R  D++ MY L + V +
Sbjct: 283 HSIIQQ-ERKNDMANMYVLLRAVSS 306

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>CUL5_CAEEL (Q23639) Cullin-5|
          Length = 741

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
 Frame = +3

Query: 27  IEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLG---------MYSETFEKPFLEC 179
           I  + +   LRL++ ER G  ID   +  + + F  L          +Y ++FE+ F+E 
Sbjct: 135 ISEQLLVEALRLVKEERDGNIIDAQNVIGIRESFVALNDRAGEDPLLVYRQSFERQFIEQ 194

Query: 180 TSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRH 359
           T+E+Y       L +  + +Y+ +A+ +L+EE  R   YLE N      + T  + +++ 
Sbjct: 195 TTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMN------SPTSGKHMEKA 248

Query: 360 TSAIIEK-GFTVLMEANR------VTDLSRMYTLFQRV-DAIEMLKQALSLYIRGTG 506
             A++E    T+L E ++      V  L R+Y L +R    I+ + + +  +IR  G
Sbjct: 249 VIALVESFEDTILAECSKLIASKDVERLQRLYRLIRRTRSGIDTVLKCIDTHIRTEG 305

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>CUL2_CAEEL (Q17390) Cullin-2|
          Length = 776

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
 Frame = +3

Query: 144 YSETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPL 323
           Y E+FEKP L  T ++Y+    K L      +Y++     L++E  R   YL  ++ + +
Sbjct: 219 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 278

Query: 324 IATTEKQLLQRHTSAIIEKGFTVLM-EANRVTDLSRMYTLFQRVDA-IEMLKQALSLYIR 497
           I   +K +++ H   +      ++  E N+  DL  MY L + + A + ++ +    Y++
Sbjct: 279 ITLCQKVMIKAHKDKLHAVCHDLITNEENK--DLRNMYRLLKPIQAGLSVMVKEFEEYVK 336

Query: 498 GTG 506
             G
Sbjct: 337 KKG 339

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>COG3_MOUSE (Q8CI04) Conserved oligomeric Golgi complex component 3|
          Length = 819

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
 Frame = +3

Query: 114 LLKMFTDLGMYSETFEKP------FLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEE 275
           LLK FT LGM  E  E        F +  ++    EG KY Q   + DYL    S  QE+
Sbjct: 79  LLKGFTSLGMEEERIETAQQFFSWFAKLQTQMDQDEGTKYRQ---MRDYL----SGFQEQ 131

Query: 276 HDRCILYLEANTRKPLIATTEKQLL--QRHTSAIIEKGFTVLMEANRVTDLS----RMYT 437
            D   +  + N+    + + +KQ L     T  + E    +L E + + DL+    +  +
Sbjct: 132 CD--AILNDVNSALQHLESLQKQYLFVSNKTGTLHEACEQLLKEQSELADLAEHIQQKLS 189

Query: 438 LFQRVDAIEMLKQALSLYIRGTGQGIIMDEEKD-----------KDLVPFLLEFKASLDK 584
            F  ++ I     + +L +   G   ++ +  D           KD   +LL+FK  L K
Sbjct: 190 YFNELETINTKLNSPTLSVNSEGFIPMLAKLDDCITYISSHPNFKDYPVYLLKFKQCLSK 249

Query: 585 IL 590
            L
Sbjct: 250 AL 251

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>COG3_HUMAN (Q96JB2) Conserved oligomeric Golgi complex component 3 (Vesicle|
           docking protein SEC34 homolog) (p94)
          Length = 827

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
 Frame = +3

Query: 114 LLKMFTDLGMYSETFEKP------FLECTSEFYATEGVKYLQQSDIPDYLKHAESRLQEE 275
           LLK FT LGM  E  E        F +  ++    EG KY Q   + DYL    S  QE+
Sbjct: 87  LLKGFTSLGMEEERIETAQQFFSWFAKLQTQMDQDEGTKYRQ---MRDYL----SGFQEQ 139

Query: 276 HDRCILYLEANTRKPLIATTEKQLL--QRHTSAIIEKGFTVLMEANRVTDLS----RMYT 437
            D   +  + N+    + + +KQ L     T  + E    +L E + + DL+    +  +
Sbjct: 140 CD--AILNDVNSALQHLESLQKQYLFVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLS 197

Query: 438 LFQRVDAIEMLKQALSLYIRGTGQGIIMDEEKD-----------KDLVPFLLEFKASLDK 584
            F  ++ I     + +L +   G   ++ +  D           KD   +LL+FK  L K
Sbjct: 198 YFNELETINTKLNSPTLSVNSDGFIPMLAKLDDCITYISSHPNFKDYPIYLLKFKQCLSK 257

Query: 585 IL 590
            L
Sbjct: 258 AL 259

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>CAPP_THET8 (Q5SKL7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 858

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +3

Query: 87  AIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRL 266
           A+++  L  L +M+     ++ T E   +       A  GV  L    +P+ L+    RL
Sbjct: 721 ALEELPLDLLREMYRGWPFFASTLEAAAMALAK---ADMGVARLYLRLVPEPLRFFYRRL 777

Query: 267 QEEHDRCILYLEANTRKPLI---ATTEKQLLQRH 359
            EEH R +  LEA  + PL+    T E+Q+  R+
Sbjct: 778 AEEHARTVALLEAVFQAPLLHNQRTLERQIRLRN 811

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>CAPP_THET2 (Q72L05) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 858

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +3

Query: 87  AIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRL 266
           A+++  L  L +M+     ++ T E   +       A  GV  L    +P+ L+    RL
Sbjct: 721 ALEELPLDLLREMYRGWPFFASTLEAAAMALAK---ADMGVARLYLRLVPEPLRFFYRRL 777

Query: 267 QEEHDRCILYLEANTRKPLI---ATTEKQLLQRH 359
            EEH R +  LEA  + PL+    T E+Q+  R+
Sbjct: 778 AEEHARTVALLEAVFQAPLLHNQRTLERQIRLRN 811

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>DHB3_MOUSE (P70385) Estradiol 17-beta-dehydrogenase 3 (EC 1.1.1.62)|
           (17-beta-HSD 3) (Testicular 17-beta-hydroxysteroid
           dehydrogenase)
          Length = 305

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 26/101 (25%), Positives = 44/101 (43%)
 Frame = -3

Query: 568 LNSRRKGTRSLSFSSSMIMPWPVPRIYKLSACFSISMASTL*KSVYILDRSVTRFASIRT 389
           + SRRKG      S + + PWP+  +Y  S  F  + +  L  SV   D+ +     I+ 
Sbjct: 168 MESRRKGLILNISSGAALRPWPLYSLYSASKAFVYTFSKAL--SVEYRDKGII----IQV 221

Query: 388 VNPFSIIADVCRCSNCFSVVAISGFLVLASKYRMHLSCSSC 266
           + P+SI   + +  N         F+  + KY + +   SC
Sbjct: 222 LTPYSISTPMTKYLNNKMTKTADEFVKESLKY-VTIGAESC 261

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>SYA_ANASP (Q8YUD4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
            (AlaRS)
          Length = 880

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 9/155 (5%)
 Frame = +3

Query: 147  SETFEKPFLECTSEFYATEGVKYLQQSD---IPDYLKHAESRLQEEHDRCILYLEA---- 305
            S T E    +  SE     GV+ ++      + DYL   +  +++  DR  +  E     
Sbjct: 674  SNTAEIGVFKIISEAGVASGVRRIEAVSGLAVLDYLNVRDKVVKDLSDRFKVKPEELPER 733

Query: 306  -NTRKPLIATTEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRVDAIEMLKQAL 482
              T +  + TTEKQL        I K  ++L  A+   D   +    + VD  E LK A 
Sbjct: 734  ITTLQNELRTTEKQLETLKGQLAIAKSDSLLQTADTCGDYKIIVAQLEGVDP-ESLKSAA 792

Query: 483  SLYIRGTGQG-IIMDEEKDKDLVPFLLEFKASLDK 584
               ++  G G +++    + D V  +  F   ++K
Sbjct: 793  ERLLQKIGNGAVVLGSVPEADKVSLVAAFSPEVNK 827

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>RPOA2_THEAC (Q03586) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)|
          Length = 508

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
 Frame = +3

Query: 57  RLIESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYAT-EGVKYLQQSDI 233
           RLIE E +  AI K      +K  T +    +   KP  E   + Y   E +K L    I
Sbjct: 289 RLIEMEDIMNAISK------IKGITVMEDSGQIIIKPQQESFKKLYLLQEQIKGLTIKGI 342

Query: 234 PDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKGFTVLMEANR 410
              +K A +R++ +  R ++Y + +  K ++   E    + +T+ I+E    + +EA R
Sbjct: 343 SG-IKRAIARVEGKEHRWVIYTQGSNLKDVLEVDEVDPTRTYTNDIVEIANVLGIEAAR 400

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>HAT1_CANGA (Q6FKS5) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 388

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 25/76 (32%), Positives = 38/76 (50%)
 Frame = +3

Query: 63  IESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYATEGVKYLQQSDIPDY 242
           IES RL   I+K   S LL+M   L   S  FE    +        +G++ ++ SDI D 
Sbjct: 296 IESTRLKYKIEKRQFSRLLEMIL-LSTGSNNFEYQVKQRLL-IKNKDGLEGMEVSDIKDA 353

Query: 243 LKHAESRLQEEHDRCI 290
           L  +   L+E++DR +
Sbjct: 354 LNKSFESLREDYDRIL 369

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>DNAK_WOLTR (Q5GSE1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 635

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
 Frame = +3

Query: 216 LQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQL------LQRHTSAIIE 377
           L +S+I   ++ AE + QE+  R       N    L+ +TEK L      +     + IE
Sbjct: 497 LSESEINRMIREAEEKAQEDEKRKKFVEVKNQADSLVHSTEKSLKEYGDKVSPEDKSAIE 556

Query: 378 KGFTVLMEANRVTDLSRMYTLFQRVDAIEMLKQAL 482
                L EA++  ++  + ++ Q++  +  L   L
Sbjct: 557 NAVNELKEASKSDNIDDVDSIQQKITNLSQLSMKL 591

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>LMX1A_MOUSE (Q9JKU8) LIM homeobox transcription factor 1 alpha (LIM/homeobox|
           protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1)
          Length = 382

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 355 RCSNCFSVVAISGFLVLASKYRMHLSCSSC 266
           +C  CF  +A + F++ A K   HLSC  C
Sbjct: 93  KCGGCFEAIAPNEFVMRAQKSVYHLSCFCC 122

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>LMX1A_MESAU (Q04650) LIM homeobox transcription factor 1 alpha (LIM/homeobox|
           protein LMX1A) (LMX-1) (LIM-homeobox protein 1)
          Length = 382

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 355 RCSNCFSVVAISGFLVLASKYRMHLSCSSC 266
           +C  CF  +A + F++ A K   HLSC  C
Sbjct: 93  KCGGCFEAIAPNEFVMRAQKSVYHLSCFCC 122

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>LMX1A_HUMAN (Q8TE12) LIM homeobox transcription factor 1 alpha (LIM/homeobox|
           protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1)
          Length = 382

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 355 RCSNCFSVVAISGFLVLASKYRMHLSCSSC 266
           +C  CF  +A + F++ A K   HLSC  C
Sbjct: 93  KCGGCFEAIAPNEFVMRAQKSVYHLSCFCC 122

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>G3P_STREQ (Q59906) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)|
           (GAPDH) (Plasminogen-binding protein) (Plasmin receptor)
          Length = 335

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
 Frame = +3

Query: 63  IESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKP---------FLECTSE------FYA 197
           +E  R+ +  D  +L+HLLK  T  G +  T E           F++ ++E       +A
Sbjct: 26  VEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGNFIKVSAERDPENIDWA 85

Query: 198 TEGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTE-----KQLLQRHT 362
           T+GV+ + ++      K A  +           L AN  K ++ T       KQL    T
Sbjct: 86  TDGVEIVLEATGFFAKKEAAEK----------PLHANGAKKVVITAPGGNDVKQLFSTLT 135

Query: 363 SAIIEKGFTVLMEANRVTD-LSRMYTLFQRVDAIEMLKQALSLYIRGTGQGIIMD 524
           ++I++   TV+  A+  T+ L+ M       DA  + K  ++     TG  +I+D
Sbjct: 136 TSILDGTETVISGASCTTNCLAPMAKALH--DAFGIQKGLMTTIHAYTGDQMIVD 188

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>DYHC_NEUCR (P45443) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4367

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 138  GMYSETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRL 266
            G+Y +TF K  +E         GV++ Q + + +YL  A+ RL
Sbjct: 3530 GLYDQTFRKSMMEDWLHQLHLSGVQFKQHNPMTEYLSTADERL 3572

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>UB2Q2_MOUSE (Q8K2Z8) Ubiquitin-conjugating enzyme E2 Q2 (EC 6.3.2.19)|
           (Ubiquitin-protein ligase Q2) (Ubiquitin carrier protein
           Q2)
          Length = 378

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 15/45 (33%), Positives = 28/45 (62%)
 Frame = +3

Query: 411 VTDLSRMYTLFQRVDAIEMLKQALSLYIRGTGQGIIMDEEKDKDL 545
           + DL R+Y L + +D +EML Q L     GT + +  +EE+++++
Sbjct: 107 ICDLCRLYNLPKHLD-VEMLDQPLPTGQNGTTEEVTSEEEEEEEM 150

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>KTN1_VULVU (O97961) Kinectin|
          Length = 1330

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
 Frame = +3

Query: 63   IESERLGEAIDKTLLSHLLKMFTDL--------GMYSETFEKPFLECTSEFYATEGVKYL 218
            +E ++  EAI+      L K+F  +        G +   FEK   EC +E   +E VK L
Sbjct: 1060 VERQQYVEAIELEAKEVLKKLFPKVSVPPNLNYGEWLRGFEKKPKECVAETSGSEEVKVL 1119

Query: 219  QQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTE--KQLLQR 356
            +       LK A+    E H   +L LE    K ++A TE   Q LQR
Sbjct: 1120 EHK-----LKEAD----EMH--TLLQLECEKYKSVLAETEGILQKLQR 1156

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>DHB3_RAT (O54939) Estradiol 17-beta-dehydrogenase 3 (EC 1.1.1.62)|
           (17-beta-HSD 3) (Testicular 17-beta-hydroxysteroid
           dehydrogenase)
          Length = 306

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
 Frame = -3

Query: 568 LNSRRKGTRSLSFSSSM-IMPWPVPRIYKLSACFSISMASTL*KSVYILDRSVTRFASIR 392
           + SRR+G   L+ SS + + PWP+  +Y  S  F  + +  L  +V   D+ +     I+
Sbjct: 168 MESRRRGL-ILNISSGVGVRPWPLYSLYSASKAFVCTFSKAL--NVEYRDKGII----IQ 220

Query: 391 TVNPFSIIADVCRCSNCFSVVAISGFLVLASKYRMHLSCSSC 266
            + P+S+   + +  N   V   +   V  S   + +   +C
Sbjct: 221 VLTPYSVSTPMTKYLNTSRVTKTADEFVKESLKYVTIGAETC 262

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>IL21R_HUMAN (Q9HBE5) Interleukin-21 receptor precursor (IL-21R) (Novel|
           interleukin receptor)
          Length = 538

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +1

Query: 541 IWFPFFWNLK-HPLTKYWKKV 600
           ++ P FW+LK HPL + WKK+
Sbjct: 247 VFIPAFWSLKTHPLWRLWKKI 267

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>SMUF1_XENLA (Q9PUN2) Smad ubiquitination regulatory factor 1 (EC 6.3.2.-)|
           (Ubiquitin--protein ligase SMURF1) (Smad-specific E3
           ubiquitin ligase) (xSMURF1)
          Length = 731

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
 Frame = +3

Query: 54  LRLIESERLG--EAIDKTLLSHLLKMFT--DLGMYSETFEKPFLECTSEFYATEGVKY-L 218
           +R IE++ L   +  ++ +  HLLK F   +L +     +K  +   S++ A   +K+ L
Sbjct: 571 MRGIEAQFLALQKGFNELIPQHLLKPFEQKELELIIGGLDKIDI---SDWKANTRLKHCL 627

Query: 219 QQSDIPDYLKHA-ESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKGFTV- 392
             S+I  +   A ES  +E   R + ++  +TR PL      + LQ  T A   + FT+ 
Sbjct: 628 ANSNIVQWFWQAVESFDEERRARLLQFVTGSTRVPLQGF---KALQGSTGAAGPRLFTIH 684

Query: 393 LMEANRVTDLSRMYTLFQRVD 455
           L++AN   +L + +T F R+D
Sbjct: 685 LIDAN-TDNLPKAHTCFNRID 704

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>MURB2_SYMTH (Q67Q47) UDP-N-acetylenolpyruvoylglucosamine reductase 2 (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase 2)
          Length = 308

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = +3

Query: 348 LQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRVDAIEMLKQALSLYIRGTGQGIIMDE 527
           L+RHTS  I      L+E     +LSR+  L          ++AL +YI G+G  +++ +
Sbjct: 24  LKRHTSVRIGGPADYLVEVADRHELSRLLRLAG--------EEALPVYILGSGSNLVVSD 75

Query: 528 EKDKDLV 548
           E  + LV
Sbjct: 76  EGVRGLV 82

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>Y1851_PYRFU (Q8TZX4) Putative HTH-type transcriptional regulatory protein|
           PF1851
          Length = 316

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
 Frame = +3

Query: 381 GFTVLMEANRVTDLSRMYTLFQRVDAIEML---KQALSLYIRGTGQ-----GIIMDEEKD 536
           GF V ++  R+ +L   Y  +   +  EML   ++++  Y +G G       I ++E  D
Sbjct: 122 GFFVRIDGERLRELREKYG-YSTTELAEMLGVSRKSVQRYEKGEGMVSIDVAIRLEEIFD 180

Query: 537 KDLVPFLLEFKASLDKILEESFAKNE 614
           + LV  +  FKA ++K+   S  +NE
Sbjct: 181 EPLVKPIDIFKAKIEKVTLSSPPENE 206

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>RPOA2_THEVO (Q979F5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)|
          Length = 508

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
 Frame = +3

Query: 57  RLIESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYAT-EGVKYLQQSDI 233
           RLI  + L  AI K      +K  T +    +   KP  E   + Y   E +K L    I
Sbjct: 289 RLINQDDLVNAIYK------VKGVTVMEESGQIIVKPQQESFKKLYLLQEQIKALPIKGI 342

Query: 234 PDYLKHAESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKGFTVLMEANR 410
              +K A +R++ +  R ++Y + +  K ++   E    + +T+ I+E    + +EA R
Sbjct: 343 SG-IKRAIARVEGKEHRWVIYTQGSNLKDVLEVDEVDPTRTYTNDIVEIATVLGIEAAR 400

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>G6PD_CHLTR (O84188) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
          Length = 439

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 29/112 (25%), Positives = 45/112 (40%)
 Frame = +3

Query: 75  RLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHA 254
           R+ E+++  +  H    F+D   YS    K +LE   + Y T+G +    S  PDY +  
Sbjct: 17  RVWESLENRIFYHQAN-FSDAEGYSVL--KAYLEQLDQQYGTQGNRLFYLSTPPDYFQEI 73

Query: 255 ESRLQEEHDRCILYLEANTRKPLIATTEKQLLQRHTSAIIEKGFTVLMEANR 410
              L       + Y E   ++P             +  IIEK F V +E  R
Sbjct: 74  IRNLNRHQ---LFYHEQGAQQP------------WSRLIIEKPFGVNLETAR 110

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>TIG_GLOVI (Q7NDP0) Trigger factor (TF)|
          Length = 461

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
 Frame = +3

Query: 183 SEFYATEGVK-YLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLIATTE----KQL 347
           SEF   E ++ +L+Q       + A  + +   D  I+       K L+A T     + L
Sbjct: 267 SEFETLEALRAFLEQQQ----QEQAAEKTRANRDAAII-------KALVAETTVDLPETL 315

Query: 348 LQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQ--------RVDAIEMLKQALSLYIRGT 503
           + R    + E+ F  L +     D SR++T           RVDA   LK+ L+L     
Sbjct: 316 VNREVQFLAEQSFRNLQQQG--IDPSRIFTEENMPRVRETLRVDAENRLKRTLALAQVAR 373

Query: 504 GQGIIMDEEKDKDLVPFLLEFKASLDKILEE----SFAKNE 614
            + I+++EE+   +   ++E ++ L++ + E     FA+ E
Sbjct: 374 AENIVVEEEQ---VAARIVELRSELEEEVSEQALAEFAREE 411

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>DYHC_FUSSO (P78716) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4349

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +3

Query: 138  GMYSETFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHAESRL 266
            G+Y +TF K  ++         G++Y   + + +YL  A+ RL
Sbjct: 3528 GLYDQTFRKSMMDDWFHQLHLSGIQYKSPNPVTEYLSTADERL 3570

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>BGAL_LEULA (Q02603) Beta-galactosidase large subunit (EC 3.2.1.23) (Lactase)|
          Length = 626

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 201 EGVKYLQQSDIPDYLKHAESRLQEEHDRCILYLEANTRKPLI 326
           EGV Y  +  + D +   ESR+ E+    + YLE N  KP +
Sbjct: 492 EGVFYTPE--LKDRISDVESRMYEKPQNIVAYLEDNPTKPFL 531


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,958,296
Number of Sequences: 219361
Number of extensions: 1696547
Number of successful extensions: 5238
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 5099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5223
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result