>Y5161_ARATH (Q9M015) Protein At5g01610|
          Length = 170

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
 Frame = +2

Query: 197 ELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQKKALTHTFKQI-------GRQVSYAT 355
           ELL E ++P+G+ P           AT + +  + K LT     I          + + T
Sbjct: 56  ELLKEYDLPIGIFP---------GDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTT 106

Query: 356 EVTAFVEDRKMKRMTGVKSKELLIWITLCDMFIDKDDPSKITF 484
            VT  +E  K+  + G+K+K ++IW+ +  +     D SK+ F
Sbjct: 107 TVTGHLEKGKLTDVEGIKTK-VMIWVKVTSI---STDASKVYF 145

>CSUP_DROME (Q9V3A4) Protein catecholamines up|
          Length = 449

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/74 (29%), Positives = 26/74 (35%)
 Frame = +1

Query: 292 APEEGAHAHLQADRAAGLVRHRGDGLRRGPQDEAHDRGQEQGAPHLDHALRHVHRQGRPL 471
           AP    H H   D   G   H  D       D  HD G + G  H  H   H H  G   
Sbjct: 59  APRAEHHHHHDHDHDHGHHHHGHD------HDHDHDHGHDHGHHHHGHDHDHDHDHGHHH 112

Query: 472 QDHLQDAHRAREDL 513
             H +   +A+ DL
Sbjct: 113 HGHDERHTKAKPDL 126

>GAL1_LACLA (Q9R7D7) Galactokinase (EC 2.7.1.6) (Galactose kinase)|
          Length = 399

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 25/94 (26%), Positives = 43/94 (45%)
 Frame = +2

Query: 170 AALCAEKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQKKALTHTFKQIGRQVSY 349
           A L  +K V+L +E    LG++   D++EV   +  G +W    K +    K  G ++  
Sbjct: 64  ARLREDKKVKLYSENFPKLGVIEF-DLDEV--EKKDGELWSNYVKGMIVMLKGAGYEIDK 120

Query: 350 ATEVTAFVEDRKMKRMTGVKSKELLIWITLCDMF 451
             E+    E      ++   S ELL+ + L D+F
Sbjct: 121 GFELLIKGEIPTASGLSSSASLELLVGVVLDDLF 154

>SF3B1_SCHPO (Q10178) U2 snRNP component prp10|
          Length = 1188

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +2

Query: 176  LCAEKAVELLAETNMPLGLLP--LADMEEVGYNRATGFVWLRQKKALTHTFKQIGRQV-S 346
            +C   A+ ++AET MP  ++P  +AD      N   G +     K+L   F+ IG Q   
Sbjct: 994  VCTTVAIAIVAETCMPFTVVPALMADYRTPEMNVQNGVL-----KSLAFMFEYIGEQARD 1048

Query: 347  YATEVTAFVEDRKMKR 394
            Y   +T  + D  M R
Sbjct: 1049 YVYAITPLLADALMDR 1064

>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +1

Query: 325 ADRAAGLVRHRGDGLRRGPQDEAHDRGQEQGAPHLDHALR--HVHRQGRPLQDHLQD-AH 495
           A R   L+R R  G  RG    A DR     AP +D  LR  H H +GR   D +QD AH
Sbjct: 99  APRRRHLLRRRVGG-HRGRNRHAGDRR----APGVDSRLRQQHQHPRGRHASDRVQDGAH 153

Query: 496 RAREDL 513
             R+ L
Sbjct: 154 PRRQRL 159

>SYFB_SYNPX (Q7U6V9) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 814

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 6/119 (5%)
 Frame = +2

Query: 107 QPVEMAQ-AIEAQREGAEVY--HGAALCAEKAVELLAETNMPLGLLPLADMEEVGYNRAT 277
           +PV  A   +   REG       G  L      +++   ++P+ L  +   +  G   AT
Sbjct: 284 KPVNAASFGLRQAREGEAFIGLDGRELSLVARAQVVTCHDLPIALAGVMGSKASGVTAAT 343

Query: 278 GFVWLRQKKALTHTFKQIGRQVSYATEVTAFVEDRKMKRMT---GVKSKELLIWITLCD 445
           G +WL          +   R V   T+ +A  E    K MT    +++ ELL  +  C+
Sbjct: 344 GRIWLESAMFSPAAVRTTARSVGLRTDASARFEKGLPKEMTLACSIRALELLKELFPCE 402

>RF1_MYCPN (P75420) Peptide chain release factor 1 (RF-1)|
          Length = 359

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 22/79 (27%), Positives = 34/79 (43%)
 Frame = +2

Query: 185 EKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQKKALTHTFKQIGRQVSYATEVT 364
           EK VEL  +    L    L   +    N+      L+ K+ L   FK+  R +  A E  
Sbjct: 12  EKIVELAEQLEKDLNKPDLTFEQIKAINKE-----LKHKQPLVVKFKEFKRLIDQALEAE 66

Query: 365 AFVEDRKMKRMTGVKSKEL 421
           A +E+ ++K +     KEL
Sbjct: 67  AILENNELKELHDEAKKEL 85

>RLUB_PSEAE (Q9HZ55) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 386

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +1

Query: 373 RGPQDEAHDRGQEQGAPHLDHALRHVHRQGRPLQDHLQDAHRAREDLPRLR 525
           RGPQ  A  +G+EQG P  +   R  +R+ RP +   +    A  D P  R
Sbjct: 316 RGPQPSAERKGREQGTPVAERP-RESNRKPRPSKPRDERPASAPGDKPAAR 365

>ENPL_CATRO (P35016) Endoplasmin homolog precursor (GRP94 homolog)|
          Length = 817

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/60 (25%), Positives = 34/60 (56%)
 Frame = -3

Query: 522 ETGKVLPSPVGVLKVILEGSSLSMNMSQSVIQMRSSLLLTPVMRFILRSSTKAVTSVAYE 343
           E  ++LP  +  LK +++  +L +N+S+ ++Q  SS  L  + + ++R +   +  +A E
Sbjct: 432 EFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSS--LKTIKKKLIRKALDMIRKIADE 489

>UREE_RHOS4 (Q3J156) Urease accessory protein ureE|
          Length = 182

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +1

Query: 394 HDRGQEQGAPHLDHALRHVHRQGRPLQDHLQDAHRA 501
           HD G  QG  H DH   HVH   +P +D   DA  A
Sbjct: 148 HDHGPAQGHGH-DHPHVHVHISHKPDEDETPDADPA 182

>FLGI_THEMA (Q9X1M5) Flagellar P-ring protein precursor (Basal body P-ring|
           protein)
          Length = 331

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 346 RDLPPDLLEGVRERLLLAQPDEAGGAVVAHLLH 248
           RD+P D+L+G    +LL QPD    A VA  ++
Sbjct: 171 RDIPSDMLDGDSVTILLRQPDITTAARVARAIN 203

>NOL1_HUMAN (P46087) Proliferating-cell nucleolar antigen p120|
            (Proliferation-associated nucleolar protein p120)
          Length = 855

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
 Frame = +2

Query: 38   PSNSGASTP----PSRVESEFTSRDLIQPVEMAQAIEAQREGAEVYHGAALCAEKAVELL 205
            P  +   TP    PS+ ++    +D  QP+  A+ +E Q+   + +  AA   +K  +  
Sbjct: 720  PKGTDTQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQFAEQPFEKAAF--QKQNDTP 777

Query: 206  AETNMPLGL--LPLADMEEVGYNRATGFV-------WLRQKKALTHTFKQIGRQVS 346
               ++PL L  +P A  ++ G N + G         WL+ ++       Q+G   S
Sbjct: 778  KGLSLPLCLPSVPAAPHQQRGRNLSPGATASCCYLRWLKTRRVAHCHCHQVGTLAS 833

>TRMU_XYLFT (Q87DM0) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 379

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 436 RDPDEELLALDPGHALHLAVLDEGRHLGGVRDLPP 332
           RDP E+ +A  PG         +G ++GGVR+ PP
Sbjct: 218 RDPQEQRIAEHPGVFYFTLGQRQGLNIGGVRNRPP 252

>TRMU_XYLFA (Q9PDD9) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 379

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 436 RDPDEELLALDPGHALHLAVLDEGRHLGGVRDLPP 332
           RDP E+ +A  PG         +G ++GGVR+ PP
Sbjct: 218 RDPQEQRIAEHPGVFYFTLGQRQGLNIGGVRNRPP 252

>YOY8_CAEEL (P34665) Hypothetical protein ZK652.8|
          Length = 171

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 373 RGPQDEAHDRGQEQGAPHLDHALRHVHRQGRPLQDHLQDAHRAREDL 513
           RG  DEA   GQ++    L   + +V  Q R   + L D H  R D+
Sbjct: 79  RGLLDEAKANGQQKELEELSKEIENVETQTRIWLNELHDVHDKRVDI 125

>Y1162_THEMA (Q9X0P5) UPF0173 metal-dependent hydrolase TM1162|
          Length = 226

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 146 EGAEVYHGAALCAEKAVELLAETNMPLGLLPL 241
           EG ++YH       + +ELLAE N+ +  LP+
Sbjct: 132 EGKKIYHAGDTGLTREMELLAEENVDVAFLPI 163

>UL38_HCMVA (P16779) Protein UL38|
          Length = 331

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
 Frame = +2

Query: 38  PSNSGASTPPS-----RVESEFTSRDLIQPVEMAQAIEAQREG 151
           PS+S A+TPPS      VESE +S   + PV +   +    EG
Sbjct: 280 PSSSAATTPPSSVVPASVESELSSSPPLPPVVVKDVVYTAGEG 322

>ENPL_ARATH (Q9STX5) Endoplasmin homolog precursor (GRP94 homolog) (Protein|
           SHEPHERD) (HSP90-like protein 7)
          Length = 823

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 15/60 (25%), Positives = 34/60 (56%)
 Frame = -3

Query: 522 ETGKVLPSPVGVLKVILEGSSLSMNMSQSVIQMRSSLLLTPVMRFILRSSTKAVTSVAYE 343
           E  ++LP  +  LK +++  +L +N+S+ ++Q  SS  L  + + ++R +   +  +A E
Sbjct: 428 EFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSS--LKTIKKKLIRKALDMIRKLAEE 485

>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3|
          Length = 622

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
 Frame = +1

Query: 352 HRGDGLRRGPQDEAHDRGQEQG-----APHLDHALRHVHRQGRPLQDHLQDAHRA 501
           HR  GL + PQ   H     Q      +PH  H   H H Q  P   H    H+A
Sbjct: 385 HRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQA 439

>HIG_DROME (Q09101) Locomotion-related protein Hikaru genki precursor|
          Length = 958

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 319 LQADRAAGLVRHRGDGLRRGPQDEAHDRGQEQGAPHLDHALRH 447
           L A+R  G  R  G G RR  ++E    G+ +G+ +  HA+ H
Sbjct: 149 LNANRKQGKRRRAGSGRRRRIENENGQTGRGRGSRYKRHAILH 191

>GRK6_RAT (P97711) G protein-coupled receptor kinase 6 (EC 2.7.11.16) (G|
           protein-coupled receptor kinase GRK6)
          Length = 576

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 179 CAEKAVELLAETNMPLGLLPLAD-MEEVGYNRATGFVWLRQKKALTHTFKQ 328
           C +   EL   T+  L + P AD ++ + +NR   + WL ++    +TF+Q
Sbjct: 138 CKDLFQELTRLTHEYLSMAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQ 188

>BIRA_BACSU (P42975) BirA bifunctional protein [Includes: Biotin operon|
           repressor; Biotin--[acetyl-CoA-carboxylase] synthetase
           (EC 6.3.4.15) (Biotin--protein ligase)]
          Length = 325

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 158 VYHGAALCAEKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQK 301
           +YH      +K    LA  N P G L +AD +  G  R +  VW  Q+
Sbjct: 87  IYHDVLSSTQKTAHELANNNAPEGTLVVADKQTAGRGRMSR-VWHSQE 133

>GRK6_HUMAN (P43250) G protein-coupled receptor kinase 6 (EC 2.7.11.16) (G|
           protein-coupled receptor kinase GRK6)
          Length = 576

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 179 CAEKAVELLAETNMPLGLLPLAD-MEEVGYNRATGFVWLRQKKALTHTFKQ 328
           C +   EL   T+  L + P AD ++ + +NR   + WL ++    +TF+Q
Sbjct: 138 CKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQ 188

>AMPA_CHLPN (Q9Z8F8) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 499

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 12/63 (19%)
 Frame = +2

Query: 122 AQAIEAQREGAEVYHGAALCAEKAVELLAETNMPLGLLPL------------ADMEEVGY 265
           A  +    E A  +    + AE  +E  AET+ PL  LPL            ADM+ +G 
Sbjct: 377 AMVVSLGEEVAGFFSNNDVLAEDLLEASAETSEPLWRLPLVKKYDKTLHSDIADMKNLGS 436

Query: 266 NRA 274
           NRA
Sbjct: 437 NRA 439


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,777,108
Number of Sequences: 219361
Number of extensions: 988789
Number of successful extensions: 4366
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4363
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)