ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63e21 |
|---|---|
| Clone Library Name | barley_pub |
>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 181 bits (458), Expect = 5e-46 Identities = 92/132 (69%), Positives = 92/132 (69%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXXX 181 ASTSCFLHQST VGRTQLFVCKA KNDEAASDAAVVTSRR Sbjct: 2 ASTSCFLHQSTARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAGA 61 Query: 182 XXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLR 361 NVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLR Sbjct: 62 AAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLR 121 Query: 362 YEDNFDATSNLS 397 YEDNFDATSNLS Sbjct: 122 YEDNFDATSNLS 133
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 120 bits (301), Expect = 8e-28 Identities = 63/136 (46%), Positives = 70/136 (51%), Gaps = 4/136 (2%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDAAVVTSRRXXXXX 169 ASTSCFLH QL VC+A K A + V SRR Sbjct: 2 ASTSCFLHHHALTAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALTV 61 Query: 170 XXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPG 349 NVFGK K NTD++ YSG+GFKL IP+KWNPSKEREFPG Sbjct: 62 LIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPG 121 Query: 350 QVLRYEDNFDATSNLS 397 QVLRYEDNFD+ SNLS Sbjct: 122 QVLRYEDNFDSNSNLS 137
>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 259 Score = 119 bits (299), Expect = 1e-27 Identities = 63/135 (46%), Positives = 72/135 (53%), Gaps = 3/135 (2%) Frame = +2 Query: 2 ASTSCFLHQS---TXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXX 172 AST CFLH T + VCKA K D+ V SRR Sbjct: 2 ASTQCFLHHQYAITTPTRTLSQRQVVTTKPNHIVCKAQKQDDVVD---AVVSRRLALSVL 58 Query: 173 XXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQ 352 NVFGKAK NTD++ Y+G+GFKL++PAKWNPSKEREFPGQ Sbjct: 59 IGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPGQ 118 Query: 353 VLRYEDNFDATSNLS 397 VLRYEDNFDATSN+S Sbjct: 119 VLRYEDNFDATSNVS 133
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 117 bits (292), Expect = 9e-27 Identities = 64/142 (45%), Positives = 77/142 (54%), Gaps = 10/142 (7%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTS---R 151 AST+CFLH R Q VCKA K D+ ++A V+ S R Sbjct: 2 ASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDD--NEANVLNSGVSR 59 Query: 152 RXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSK 331 R NVFGK KKNT+F+ Y+G+GFKL++P+KWNPSK Sbjct: 60 RLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSK 119 Query: 332 EREFPGQVLRYEDNFDATSNLS 397 E+EFPGQVLRYEDNFDATSNLS Sbjct: 120 EKEFPGQVLRYEDNFDATSNLS 141
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 116 bits (290), Expect = 1e-26 Identities = 62/140 (44%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDA--AVVTSRR 154 AST CFLHQ + + VC+A K D +VV SRR Sbjct: 2 ASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSRR 61 Query: 155 XXXXXXXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKE 334 NVFGK K+NTDF+AY+G+GFKL +PAKWNPSKE Sbjct: 62 LALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSKE 121 Query: 335 REFPGQVLRYEDNFDATSNL 394 EFPGQVLRYEDNFD+TSNL Sbjct: 122 VEFPGQVLRYEDNFDSTSNL 141
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 115 bits (287), Expect = 3e-26 Identities = 61/132 (46%), Positives = 72/132 (54%), Gaps = 1/132 (0%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXVG-RTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 178 AST CFLHQ + +C+A K D+A + + V SRR Sbjct: 3 ASTQCFLHQYHALRSSPARTSSVPSPKPNQLICRAQKQDDANNTSNAV-SRRLALTLLIG 61 Query: 179 XXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 358 NVFGK K+NTDF+ Y+G+GFKL IPAKWNPSKE EFPGQVL Sbjct: 62 TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVL 121 Query: 359 RYEDNFDATSNL 394 RYEDNFD+TSNL Sbjct: 122 RYEDNFDSTSNL 133
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 115 bits (287), Expect = 3e-26 Identities = 62/132 (46%), Positives = 74/132 (56%), Gaps = 1/132 (0%) Frame = +2 Query: 2 ASTSCFLHQ-STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 178 AST CFLHQ + +C+A K D+A S+AAV SRR Sbjct: 3 ASTQCFLHQYHALRSSPARTSSVSSPKPNQLICRAQKQDDA-SNAAV--SRRLALTLLIG 59 Query: 179 XXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 358 NVFGK K+NTDF+ Y+G+GFKL +PAKWNPSKE E+PGQVL Sbjct: 60 TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVL 119 Query: 359 RYEDNFDATSNL 394 RYEDNFD+TSNL Sbjct: 120 RYEDNFDSTSNL 131
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 110 bits (274), Expect = 1e-24 Identities = 58/136 (42%), Positives = 71/136 (52%), Gaps = 4/136 (2%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXVGRTQL----FVCKAHKNDEAASDAAVVTSRRXXXXX 169 A ++CFLHQS + + VCKA + E + SRR Sbjct: 2 AYSACFLHQSALASSTARSSPSSSSQRYVSISKLVCKAQQTHEEDNSTV---SRRLALTL 58 Query: 170 XXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPG 349 NVFGK KKNTDF AYSG+GF++ +PAKWNPS+E E+PG Sbjct: 59 LVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPG 118 Query: 350 QVLRYEDNFDATSNLS 397 QVLRYEDNFDATSNL+ Sbjct: 119 QVLRYEDNFDATSNLN 134
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 109 bits (273), Expect = 1e-24 Identities = 58/138 (42%), Positives = 75/138 (54%), Gaps = 6/138 (4%) Frame = +2 Query: 2 ASTSCFLHQ------STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXX 163 AS++CFL +T + +QL +C+A K+ + +++ SRR Sbjct: 2 ASSACFLLHHAPSTPATTSRTPSHRLVPTIKPSQL-ICRAQKSSDTDENSSTAVSRRLAL 60 Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREF 343 NVFGKAK NTDF+ Y+G+GF L+IPAKWNPSKE EF Sbjct: 61 TILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVEF 120 Query: 344 PGQVLRYEDNFDATSNLS 397 PGQVLRYEDNFD TSN+S Sbjct: 121 PGQVLRYEDNFDVTSNVS 138
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 107 bits (267), Expect = 7e-24 Identities = 56/139 (40%), Positives = 72/139 (51%), Gaps = 7/139 (5%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTSRRXX 160 A ++CFLHQS + + +CKA ++ E + A SRR Sbjct: 2 AYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAV---SRRLA 58 Query: 161 XXXXXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 340 NVFGK K NTDF+ Y+G+GFK+ +PAKWNPSKE E Sbjct: 59 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIE 118 Query: 341 FPGQVLRYEDNFDATSNLS 397 +PGQVLR+EDNFDATSNL+ Sbjct: 119 YPGQVLRFEDNFDATSNLN 137
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 104 bits (259), Expect = 6e-23 Identities = 57/137 (41%), Positives = 69/137 (50%), Gaps = 6/137 (4%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDA--AVVTSRRXXX 163 AST CFLH + + QL VC+A K D +V SRR Sbjct: 2 ASTQCFLHHHALSTPARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLAL 61 Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREF 343 NVFGK K +TDF Y+G+GFKL IP+KWNP+KE E+ Sbjct: 62 TVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEY 121 Query: 344 PGQVLRYEDNFDATSNL 394 PGQVLR+EDNFDATSN+ Sbjct: 122 PGQVLRFEDNFDATSNV 138
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 102 bits (255), Expect = 2e-22 Identities = 56/138 (40%), Positives = 67/138 (48%), Gaps = 7/138 (5%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXXV----GRTQLFVCKAHKNDEAASDA---AVVTSRRXX 160 AST CFLH + QL VC+A A +V SRR Sbjct: 2 ASTQCFLHHHALSTPARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRLA 61 Query: 161 XXXXXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 340 NVFGK K +TDF Y+G+GFKL IP+KWNP+KE E Sbjct: 62 LTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVE 121 Query: 341 FPGQVLRYEDNFDATSNL 394 +PGQVLR+EDNFDATSN+ Sbjct: 122 YPGQVLRFEDNFDATSNV 139
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 101 bits (251), Expect = 5e-22 Identities = 58/140 (41%), Positives = 71/140 (50%), Gaps = 8/140 (5%) Frame = +2 Query: 2 ASTSCFLHQSTXXXXXXXXXXXX--------VGRTQLFVCKAHKNDEAASDAAVVTSRRX 157 A + FLHQS + R VC+A ++ E + A V R Sbjct: 2 AYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSA--VFRRLA 59 Query: 158 XXXXXXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKER 337 NVFGK KKNTDF+ Y+GEGFK+ IP+KWNPSKE Sbjct: 60 LTLLVGAAAIGSKVSPAPXAAYGEAANVFGKPKKNTDFLPYTGEGFKIQIPSKWNPSKEI 119 Query: 338 EFPGQVLRYEDNFDATSNLS 397 E+PGQVLR+EDNFDATSN+S Sbjct: 120 EYPGQVLRFEDNFDATSNVS 139
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 96.3 bits (238), Expect = 2e-20 Identities = 53/137 (38%), Positives = 68/137 (49%), Gaps = 6/137 (4%) Frame = +2 Query: 2 ASTSCFLHQ-----STXXXXXXXXXXXXVGRTQLFVCKAHKND-EAASDAAVVTSRRXXX 163 AST+CFLH +T + Q + + + A++ + SRR Sbjct: 2 ASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDALLSRRLAL 61 Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXNVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREF 343 NVFGK K NTDF +G+GFK++IP+KWNPSKE EF Sbjct: 62 TILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVEF 121 Query: 344 PGQVLRYEDNFDATSNL 394 PGQVLRYEDNFD TSN+ Sbjct: 122 PGQVLRYEDNFDTTSNV 138
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 92.8 bits (229), Expect = 2e-19 Identities = 40/54 (74%), Positives = 48/54 (88%) Frame = +2 Query: 236 NVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLS 397 NVFGK K NTDF A +G+GF++ +PAKWNPS+E E+PGQVLRYEDNFDATSNL+ Sbjct: 38 NVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLN 91
>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) Length = 245 Score = 84.0 bits (206), Expect = 8e-17 Identities = 35/53 (66%), Positives = 43/53 (81%) Frame = +2 Query: 236 NVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNL 394 NVFGK + FV Y+G+GF L++PAKWNPSKE +FPG +LRYEDNFDA +NL Sbjct: 64 NVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPGVILRYEDNFDAVNNL 116
>PSBP1_PHYPA (P80660) Oxygen-evolving enhancer protein 2 (OEE2) (20 kDa subunit| of oxygen evolving system of photosystem II) (Fragments) Length = 43 Score = 34.3 bits (77), Expect = 0.073 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = +2 Query: 254 KKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNL 394 KK T F + G GF L +P E + EDNFDAT+NL Sbjct: 1 KKQTGFTPFIGNGFSLDVPXSITEYGPXE------KXEDNFDATNNL 41
>UPPP_LACPL (Q88SK7) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 275 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -1 Query: 357 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 235 S PG SRS G + G I + S AT+ FF A+P F Sbjct: 163 SLIPGTSRS--GATILGAILIGTSRYVATEFSFFMAIPTMF 201
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 Query: 59 GAPRQPGARWTGGGSRR 9 GAPR PG R GGG+RR Sbjct: 525 GAPRGPGGRPPGGGNRR 541
>PA2G3_HUMAN (Q9NZ20) Group 3 secretory phospholipase A2 precursor (EC 3.1.1.4)| (Group III secretory phospholipase A2) (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2) Length = 509 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +1 Query: 268 LRGVQRRGVQTDDPGQVEPQQGA*VPWAGAPLRGQLRRHQQPLR 399 LR +Q+R Q D G E Q PW PLRG + + Q L+ Sbjct: 454 LRRLQQRRHQLQDKGTDERQ-----PWPSEPLRGPMSFYNQCLQ 492
>YZN4_CAEEL (P54245) Hypothetical acetylcholine receptor-like protein F18G5.4| precursor Length = 615 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = -2 Query: 365 RNGAPAQGTHAPCWGSTW 312 RNGA QG H P W W Sbjct: 410 RNGAANQGRHVPAWMQKW 427
>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)| (Zona occludens 1 protein) (Tight junction protein 1) Length = 1745 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = +1 Query: 19 PPPVHRA-PGCLGAPCSRRRAHPAVRLQG 102 PP H + PGCLGAP S AH +R +G Sbjct: 963 PPTSHASQPGCLGAP-SAEAAHVGLRGEG 990
>RL3_ANASP (Q8YPH9) 50S ribosomal protein L3| Length = 211 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +1 Query: 31 HRAPGCLGAPCSRRRAHPAVRLQG 102 HRAPG +GA + R +P R+ G Sbjct: 140 HRAPGSIGAGTTPGRVYPGKRMAG 163
>UPPP_STRPM (Q48VA9) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 279 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -1 Query: 357 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 235 S PG SRS G + G I L S A FF A+P F Sbjct: 165 SIVPGTSRS--GATILGAIILGTSRTVAADFTFFLAIPTMF 203
>UPPP_STRP8 (P67394) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 279 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -1 Query: 357 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 235 S PG SRS G + G I L S A FF A+P F Sbjct: 165 SIVPGTSRS--GATILGAIILGTSRTVAADFTFFLAIPTMF 203
>UPPP_STRP6 (Q5XDV8) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 279 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -1 Query: 357 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 235 S PG SRS G + G I L S A FF A+P F Sbjct: 165 SIVPGTSRS--GATILGAIILGTSRTVAADFTFFLAIPTMF 203
>UPPP_STRP3 (P67393) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 279 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -1 Query: 357 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 235 S PG SRS G + G I L S A FF A+P F Sbjct: 165 SIVPGTSRS--GATILGAIILGTSRTVAADFTFFLAIPTMF 203
>UPPP_STRP1 (P67392) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 279 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -1 Query: 357 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 235 S PG SRS G + G I L S A FF A+P F Sbjct: 165 SIVPGTSRS--GATILGAIILGTSRTVAADFTFFLAIPTMF 203 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,940,354 Number of Sequences: 219361 Number of extensions: 659165 Number of successful extensions: 2128 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2047 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2118 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
