ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464580.1| Oryza sativa (japonica cultivar-group), mRNA 513 e-142
2ref|XM_464581.1| Oryza sativa (japonica cultivar-group), mRNA 513 e-142
3dbj|AK121183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
4dbj|AK070031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
5dbj|AK066171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 505 e-140
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
7dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
8dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
9gb|BT013593.1| Lycopersicon esculentum clone 132356R, mRNA sequence 107 4e-20
10gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete se... 76 2e-10
11ref|NM_179209.1| Arabidopsis thaliana unknown protein AT4G13350 ... 74 6e-10
12ref|NM_117409.3| Arabidopsis thaliana unknown protein AT4G13350 ... 74 6e-10
13gb|BT000809.1| Arabidopsis thaliana At4g13350 mRNA sequence 74 6e-10
14gb|BT008379.1| Arabidopsis thaliana At4g13350 gene, complete cds 74 6e-10
15gb|AY062505.1| Arabidopsis thaliana putative protein (At4g13350;... 74 6e-10
16ref|NM_191068.1| Oryza sativa (japonica cultivar-group), predic... 68 4e-08
17emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, ... 68 4e-08
18emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC... 68 4e-08
19dbj|AK101729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
20dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone... 68 4e-08
21dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone... 60 9e-06
22ref|NM_119415.2| Arabidopsis thaliana unknown protein AT4G32630 ... 50 0.009
23gb|AY735660.1| Arabidopsis thaliana hypothetical protein AT4G326... 50 0.009
24dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
26dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
27gb|AY954862.1| Arabidopsis thaliana hypothetical protein (At4g32... 50 0.009
28ref|NM_001035925.1| Arabidopsis thaliana ZIGA4; DNA binding AT1G... 48 0.035
29ref|NM_100741.3| Arabidopsis thaliana ZIGA4; DNA binding AT1G086... 48 0.035
30ref|NM_180610.2| Arabidopsis thaliana ZIGA4; DNA binding AT1G086... 48 0.035
31gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.035
32gb|BT008398.1| Arabidopsis thaliana At1g08690 gene, complete cds 48 0.035
33gb|AY081303.1| Arabidopsis thaliana unknown protein (At1g08690) ... 48 0.035
34gb|AF184145.1|AF184145 Arabidopsis thaliana ARF GAP-like zinc fi... 48 0.035
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
36gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana... 48 0.035
37dbj|AK176415.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 48 0.035
38gb|AC087474.9| Homo sapiens chromosome 15, clone RP11-350A1, com... 44 0.55
39gb|AC016142.22| Homo sapiens 3 BAC RP11-166N6 (Roswell Park Canc... 44 0.55
40emb|AL772239.8| Mouse DNA sequence from clone RP23-179O4 on chro... 44 0.55
41emb|AJ315087.1|MFA315087 Multidentia fanshawei internal transcri... 44 0.55
42gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosom... 42 2.2
43emb|CR626886.6| Zebrafish DNA sequence from clone CH211-255I3 in... 42 2.2
44gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cd... 42 2.2
45emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, ... 42 2.2
46emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BA... 42 2.2
47emb|CR848041.4| Zebrafish DNA sequence from clone DKEY-4K21 in l... 42 2.2
48emb|BX511222.10| Zebrafish DNA sequence from clone DKEY-250J7 in... 42 2.2
49gb|AC104029.5| Homo sapiens chromosome 8, clone RP11-478B14, com... 42 2.2
50gb|AC104000.5| Homo sapiens chromosome 8, clone RP11-97N12, comp... 42 2.2
51gb|AC067752.5| Homo sapiens chromosome 10 clone RP11-335G23, com... 42 2.2
52tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform ... 42 2.2
53emb|AL359693.11| Human DNA sequence from clone RP11-244G12 on ch... 40 8.6
54emb|AL139397.8| Human DNA sequence from clone RP11-445O16 on chr... 40 8.6
55gb|AC162877.2| Mus musculus chromosome 7, clone RP24-211E6, comp... 40 8.6
56gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 8.6
57emb|CR932968.2| Medicago truncatula chromosome 5 clone mth2-8e17... 40 8.6
58emb|AJ579566.1|BCO579566 Botrydiopsis constricta chloroplast par... 40 8.6
59gb|AF388659.1| Apis mellifera 1D-myo-inositol-trisphosphate 3-ki... 40 8.6
60gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 8.6
61gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.6
62emb|BX842544.1|CNS0ADXP Arabidopsis thaliana Full-length cDNA Co... 40 8.6
63gb|AC156946.1| Pan troglodytes BAC clone CH251-342L21 from chrom... 40 8.6
64emb|CR931652.1| Streptococcus pneumoniae strain 34355 (serotype ... 40 8.6
65emb|CR931651.1| Streptococcus pneumoniae strain Gro Norge (serot... 40 8.6
66emb|CR931650.1| Streptococcus pneumoniae strain 423/82 (serotype... 40 8.6
67emb|CR931649.1| Streptococcus pneumoniae strain 10061/38 (seroty... 40 8.6
68emb|CR931720.1| Streptococcus pneumoniae strain L351 (serotype 47a) 40 8.6
69emb|CR931700.1| Streptococcus pneumoniae strain 7098/41 (serotyp... 40 8.6
70emb|CR931695.1| Streptococcus pneumoniae strain nr. 34374 (serot... 40 8.6
71emb|CT025675.12| Mouse DNA sequence from clone RP24-289M11 on ch... 40 8.6
72gb|AC108833.9| Mus musculus chromosome 14, clone RP23-263F4, com... 40 8.6
73gb|AE016831.1| Enterococcus faecalis V583 plasmid pTEF2, complet... 40 8.6
74gb|AC110621.6| Mus musculus BAC clone RP23-157I3 from 7, complet... 40 8.6 
>ref|XM_464580.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2963

 Score =  513 bits (259), Expect = e-142
 Identities = 409/459 (89%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 235
           ||||||||||||| || | ||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 228 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 287

                                                                       
Query: 236 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 295
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 288 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 347

                                                                       
Query: 296 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 355
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 407

                                                                       
Query: 356 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 415
            || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| 
Sbjct: 408 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 467

                                                                       
Query: 416 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 475
           |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |
Sbjct: 468 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 527

                                                                       
Query: 476 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 535
            | |||||||||||||||| |||| ||||||||||| || || ||  ||||||| |||||
Sbjct: 528 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 587

                                                                       
Query: 536 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 595
           |||| |||| ||||||||||||||  | ||| | ||||||||||||||||| ||||||||
Sbjct: 588 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 647

                                                  
Query: 596 tgaacatagcgaaaatagaagatctgatggaaatcgggg 634
           |||  |||| ||||| || ||||||||||||||| ||||
Sbjct: 648 tgagtatagtgaaaacaggagatctgatggaaattgggg 686
to top
>ref|XM_464581.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3068

 Score =  513 bits (259), Expect = e-142
 Identities = 409/459 (89%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 235
           ||||||||||||| || | ||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 190 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 249

                                                                       
Query: 236 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 295
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 250 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 309

                                                                       
Query: 296 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 355
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 369

                                                                       
Query: 356 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 415
            || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| 
Sbjct: 370 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 429

                                                                       
Query: 416 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 475
           |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |
Sbjct: 430 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 489

                                                                       
Query: 476 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 535
            | |||||||||||||||| |||| ||||||||||| || || ||  ||||||| |||||
Sbjct: 490 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 549

                                                                       
Query: 536 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 595
           |||| |||| ||||||||||||||  | ||| | ||||||||||||||||| ||||||||
Sbjct: 550 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 609

                                                  
Query: 596 tgaacatagcgaaaatagaagatctgatggaaatcgggg 634
           |||  |||| ||||| || ||||||||||||||| ||||
Sbjct: 610 tgagtatagtgaaaacaggagatctgatggaaattgggg 648
to top
>dbj|AK121183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084M01, full
           insert sequence
          Length = 2961

 Score =  513 bits (259), Expect = e-142
 Identities = 409/459 (89%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 235
           ||||||||||||| || | ||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 226 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 285

                                                                       
Query: 236 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 295
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 286 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 345

                                                                       
Query: 296 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 355
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 405

                                                                       
Query: 356 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 415
            || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| 
Sbjct: 406 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 465

                                                                       
Query: 416 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 475
           |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |
Sbjct: 466 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 525

                                                                       
Query: 476 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 535
            | |||||||||||||||| |||| ||||||||||| || || ||  ||||||| |||||
Sbjct: 526 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 585

                                                                       
Query: 536 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 595
           |||| |||| ||||||||||||||  | ||| | ||||||||||||||||| ||||||||
Sbjct: 586 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 645

                                                  
Query: 596 tgaacatagcgaaaatagaagatctgatggaaatcgggg 634
           |||  |||| ||||| || ||||||||||||||| ||||
Sbjct: 646 tgagtatagtgaaaacaggagatctgatggaaattgggg 684
to top
>dbj|AK070031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038F08, full
           insert sequence
          Length = 1986

 Score =  513 bits (259), Expect = e-142
 Identities = 409/459 (89%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 235
           ||||||||||||| || | ||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 190 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 249

                                                                       
Query: 236 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 295
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 250 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 309

                                                                       
Query: 296 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 355
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 369

                                                                       
Query: 356 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 415
            || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| 
Sbjct: 370 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 429

                                                                       
Query: 416 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 475
           |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |
Sbjct: 430 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 489

                                                                       
Query: 476 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 535
            | |||||||||||||||| |||| ||||||||||| || || ||  ||||||| |||||
Sbjct: 490 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 549

                                                                       
Query: 536 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 595
           |||| |||| ||||||||||||||  | ||| | ||||||||||||||||| ||||||||
Sbjct: 550 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 609

                                                  
Query: 596 tgaacatagcgaaaatagaagatctgatggaaatcgggg 634
           |||  |||| ||||| || ||||||||||||||| ||||
Sbjct: 610 tgagtatagtgaaaacaggagatctgatggaaattgggg 648
to top
>dbj|AK066171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F05, full
           insert sequence
          Length = 3068

 Score =  505 bits (255), Expect = e-140
 Identities = 408/459 (88%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 235
           ||||||||||||| || | ||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 190 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 249

                                                                       
Query: 236 caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtatg 295
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 250 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctg 309

                                                                       
Query: 296 cacaaatttctggaccttcgtttgtaccaattgcagtggagcacaccgagagttcacgca 355
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgca 369

                                                                       
Query: 356 ccgggtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaagg 415
            || | ||| || ||||| |||||||||||||||||||| ||||| | ||| || |||| 
Sbjct: 370 tcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaaga 429

                                                                       
Query: 416 aggaggaaatgagcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatcc 475
           |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |
Sbjct: 430 aggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattc 489

                                                                       
Query: 476 ataccctgacagcagtaatacggacaaattgaggaatttcatcaaatatgtttacgtgga 535
            | |||||||||||||||| |||| ||||||||||| || || ||  ||||||| |||||
Sbjct: 490 tttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtgga 549

                                                                       
Query: 536 acggcgatatacaggagaaagaagctctgatagaccaccgaggggaaaggacgataagga 595
           |||| |||| ||||||||||||||  | ||| | ||||||||||||||||| ||||||||
Sbjct: 550 acggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataagga 609

                                                  
Query: 596 tgaacatagcgaaaatagaagatctgatggaaatcgggg 634
           |||  |||| ||||| || ||||||||| ||||| ||||
Sbjct: 610 tgagtatagtgaaaacaggagatctgattgaaattgggg 648
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                           
Query: 176     ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 235
               ||||||||||||| || | ||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 6109548 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 6109607

                                                           
Query: 236     caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgg 279
               |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6109608 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgg 6109651



 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                           
Query: 278     gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagc 337
               ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6111936 gggaccacaatatgtctgtacaaatttctggaccttcatttgtaccaattgcagtggagc 6111995

                  
Query: 338     aca 340
               |||
Sbjct: 6111996 aca 6111998



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                           
Query: 427     agcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatccataccctgaca 486
               ||||||||||||||||||| ||||||||||||||| |||| |||||| | | ||||||||
Sbjct: 6112313 agcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattctttccctgaca 6112372

                   
Query: 487     gcag 490
               ||||
Sbjct: 6112373 gcag 6112376



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                           
Query: 341     ccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaagt 400
               ||||||||||||||| || | ||| || ||||| |||||||||||||||||||| |||||
Sbjct: 6112144 ccgagagttcacgcatcgagcgaagtcagtttctatggctaaatttactgcacaggaagt 6112203

                                           
Query: 401     cactgctctacaaggaggaggaaatgag 428
                | ||| || |||| |||||||||||||
Sbjct: 6112204 tagtgcccttcaagaaggaggaaatgag 6112231



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                           
Query: 488     cagtaatacggacaaattgaggaatttcatcaaatatgtttacgtggaacggcgatatac 547
               ||||||| |||| ||||||||||| || || ||  ||||||| ||||||||| |||| ||
Sbjct: 6112460 cagtaatgcggataaattgaggaactttattaagcatgtttatgtggaacggagatacac 6112519

                                                     
Query: 548     aggagaaagaagctctgatagaccaccgaggggaaagg 585
               ||||||||||||  | ||| | ||||||||||||||||
Sbjct: 6112520 aggagaaagaagtgcagatcggccaccgaggggaaagg 6112557



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                   
Query: 583     aggacgataaggatgaacatagcgaaaatagaagatctgatggaaatcgggg 634
               |||| |||||||||||  |||| ||||| || ||||||||||||||| ||||
Sbjct: 6112671 aggatgataaggatgagtatagtgaaaacaggagatctgatggaaattgggg 6112722
to top
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_A02
          Length = 175153

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                         
Query: 176   ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 235
             ||||||||||||| || | ||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 75030 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 75089

                                                         
Query: 236   caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgg 279
             |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 75090 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgg 75133



 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                         
Query: 278   gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagc 337
             ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 77418 gggaccacaatatgtctgtacaaatttctggaccttcatttgtaccaattgcagtggagc 77477

                
Query: 338   aca 340
             |||
Sbjct: 77478 aca 77480



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                         
Query: 427   agcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatccataccctgaca 486
             ||||||||||||||||||| ||||||||||||||| |||| |||||| | | ||||||||
Sbjct: 77795 agcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattctttccctgaca 77854

                 
Query: 487   gcag 490
             ||||
Sbjct: 77855 gcag 77858



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                         
Query: 341   ccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaagt 400
             ||||||||||||||| || | ||| || ||||| |||||||||||||||||||| |||||
Sbjct: 77626 ccgagagttcacgcatcgagcgaagtcagtttctatggctaaatttactgcacaggaagt 77685

                                         
Query: 401   cactgctctacaaggaggaggaaatgag 428
              | ||| || |||| |||||||||||||
Sbjct: 77686 tagtgcccttcaagaaggaggaaatgag 77713



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                         
Query: 488   cagtaatacggacaaattgaggaatttcatcaaatatgtttacgtggaacggcgatatac 547
             ||||||| |||| ||||||||||| || || ||  ||||||| ||||||||| |||| ||
Sbjct: 77942 cagtaatgcggataaattgaggaactttattaagcatgtttatgtggaacggagatacac 78001

                                                   
Query: 548   aggagaaagaagctctgatagaccaccgaggggaaagg 585
             ||||||||||||  | ||| | ||||||||||||||||
Sbjct: 78002 aggagaaagaagtgcagatcggccaccgaggggaaagg 78039



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 583   aggacgataaggatgaacatagcgaaaatagaagatctgatggaaatcgggg 634
             |||| |||||||||||  |||| ||||| || ||||||||||||||| ||||
Sbjct: 78153 aggatgataaggatgagtatagtgaaaacaggagatctgatggaaattgggg 78204
to top
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1003_F05
          Length = 147472

 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                          
Query: 176    ggcgatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgct 235
              ||||||||||||| || | ||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 130387 ggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgct 130446

                                                          
Query: 236    caagctgcccgcaaacaagaggtgcatcaactgcaacaatttgg 279
              |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130447 caagctgcccgccaacaagaggtgcatcaactgcaacaatttgg 130490



 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                          
Query: 278    gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagc 337
              ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 132775 gggaccacaatatgtctgtacaaatttctggaccttcatttgtaccaattgcagtggagc 132834

                 
Query: 338    aca 340
              |||
Sbjct: 132835 aca 132837



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                          
Query: 427    agcgtgctagagaaatatttttcaaggaatgggattctcagcgcaatccataccctgaca 486
              ||||||||||||||||||| ||||||||||||||| |||| |||||| | | ||||||||
Sbjct: 133152 agcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattctttccctgaca 133211

                  
Query: 487    gcag 490
              ||||
Sbjct: 133212 gcag 133215



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                          
Query: 341    ccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaagt 400
              ||||||||||||||| || | ||| || ||||| |||||||||||||||||||| |||||
Sbjct: 132983 ccgagagttcacgcatcgagcgaagtcagtttctatggctaaatttactgcacaggaagt 133042

                                          
Query: 401    cactgctctacaaggaggaggaaatgag 428
               | ||| || |||| |||||||||||||
Sbjct: 133043 tagtgcccttcaagaaggaggaaatgag 133070



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                          
Query: 488    cagtaatacggacaaattgaggaatttcatcaaatatgtttacgtggaacggcgatatac 547
              ||||||| |||| ||||||||||| || || ||  ||||||| ||||||||| |||| ||
Sbjct: 133299 cagtaatgcggataaattgaggaactttattaagcatgtttatgtggaacggagatacac 133358

                                                    
Query: 548    aggagaaagaagctctgatagaccaccgaggggaaagg 585
              ||||||||||||  | ||| | ||||||||||||||||
Sbjct: 133359 aggagaaagaagtgcagatcggccaccgaggggaaagg 133396



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                  
Query: 583    aggacgataaggatgaacatagcgaaaatagaagatctgatggaaatcgggg 634
              |||| |||||||||||  |||| ||||| || ||||||||||||||| ||||
Sbjct: 133510 aggatgataaggatgagtatagtgaaaacaggagatctgatggaaattgggg 133561
to top
>gb|BT013593.1| Lycopersicon esculentum clone 132356R, mRNA sequence
          Length = 2645

 Score =  107 bits (54), Expect = 4e-20
 Identities = 153/186 (82%)
 Strand = Plus / Plus

                                                                       
Query: 275 tttgggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgg 334
           |||||| ||||||||||| ||||| ||||||||||| || ||||| || |  ||||||||
Sbjct: 177 tttggggccacaatatgtttgcactaatttctggacatttgtttgcacaacatgcagtgg 236

                                                                       
Query: 335 agcacaccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcaca 394
              |||||| |||||||| ||  | |||||||| || |||||||||||||||||  ||||
Sbjct: 237 tttacaccgggagttcacccatagagtgaaatcagtatccatggctaaatttacctcaca 296

                                                                       
Query: 395 agaagtcactgctctacaaggaggaggaaatgagcgtgctagagaaatatttttcaagga 454
           |||||| | ||| || |||||||||||||||| | |||| |  ||||||| ||| |||||
Sbjct: 297 agaagttagtgcccttcaaggaggaggaaatgcgagtgcaaaggaaatatatttgaagga 356

                 
Query: 455 atggga 460
            |||||
Sbjct: 357 ttggga 362
to top
>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence
          Length = 122694

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                       
Query: 278   gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 335
             ||||||||||||||||||||||||||||||||| || ||||| || || |||||||||
Sbjct: 28005 gggaccacaatatgtatgcacaaatttctggacgtttgtttgcacaaactgcagtgga 27948



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 372   tccatggctaaatttactgcacaagaagtcactgctctacaaggaggaggaaat 425
             ||||||||||||||||||||||||||||| | ||| || |||| ||||||||||
Sbjct: 27556 tccatggctaaatttactgcacaagaagttagtgcacttcaagaaggaggaaat 27503



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 427   agcgtgctagagaaatatttttcaaggaatgggat 461
             ||||||| | ||||||||||||||| |||||||||
Sbjct: 27399 agcgtgcaaaagaaatatttttcaaagaatgggat 27365
to top
>ref|NM_179209.1| Arabidopsis thaliana unknown protein AT4G13350 transcript variant
           AT4G13350.1 mRNA, complete cds
          Length = 2335

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 279 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 338
           |||||||||||||| ||||| | ||||||||| || ||||||||||| |||||||||  |
Sbjct: 230 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 289

                                                                       
Query: 339 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 398
           || || ||||| || || || || |||||  | || ||||| ||||||||  ||||||||
Sbjct: 290 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 349

                    
Query: 399 gtcactgct 407
           || ||||||
Sbjct: 350 gttactgct 358
to top
>ref|NM_117409.3| Arabidopsis thaliana unknown protein AT4G13350 transcript variant
           AT4G13350.2 mRNA, complete cds
          Length = 2475

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 279 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 338
           |||||||||||||| ||||| | ||||||||| || ||||||||||| |||||||||  |
Sbjct: 370 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 429

                                                                       
Query: 339 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 398
           || || ||||| || || || || |||||  | || ||||| ||||||||  ||||||||
Sbjct: 430 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 489

                    
Query: 399 gtcactgct 407
           || ||||||
Sbjct: 490 gttactgct 498
to top
>gb|BT000809.1| Arabidopsis thaliana At4g13350 mRNA sequence
          Length = 2435

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 279 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 338
           |||||||||||||| ||||| | ||||||||| || ||||||||||| |||||||||  |
Sbjct: 201 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 260

                                                                       
Query: 339 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 398
           || || ||||| || || || || |||||  | || ||||| ||||||||  ||||||||
Sbjct: 261 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 320

                    
Query: 399 gtcactgct 407
           || ||||||
Sbjct: 321 gttactgct 329
to top
>gb|BT008379.1| Arabidopsis thaliana At4g13350 gene, complete cds
          Length = 1809

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 279 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 338
           |||||||||||||| ||||| | ||||||||| || ||||||||||| |||||||||  |
Sbjct: 100 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 159

                                                                       
Query: 339 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 398
           || || ||||| || || || || |||||  | || ||||| ||||||||  ||||||||
Sbjct: 160 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 219

                    
Query: 399 gtcactgct 407
           || ||||||
Sbjct: 220 gttactgct 228
to top
>gb|AY062505.1| Arabidopsis thaliana putative protein (At4g13350; T9E8.90) mRNA,
           complete cds
          Length = 2336

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 279 ggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtggagca 338
           |||||||||||||| ||||| | ||||||||| || ||||||||||| |||||||||  |
Sbjct: 230 ggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtggaata 289

                                                                       
Query: 339 caccgagagttcacgcaccgggtgaaatctgtttccatggctaaatttactgcacaagaa 398
           || || ||||| || || || || |||||  | || ||||| ||||||||  ||||||||
Sbjct: 290 catcgtgagtttacacatcgtgttaaatcgatatcaatggcgaaatttacctcacaagaa 349

                    
Query: 399 gtcactgct 407
           || ||||||
Sbjct: 350 gttactgct 358
to top
>ref|NM_191068.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2247

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 257 gtgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggaccttc 314
           ||||||||| ||||||| | |||| |||||||||||||| || |||||||||||||||
Sbjct: 75  gtgcatcaattgcaacagtgtggggccacaatatgtatgtaccaatttctggaccttc 132
to top
>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36
          Length = 199634

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                       
Query: 278   gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 335
             ||||||||||||||| ||||| | ||||||||| || ||||||||||| |||||||||
Sbjct: 59871 gggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtgga 59814
to top
>emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC clone T9E8, partial sequence
             (ESSA project)
          Length = 95432

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                       
Query: 278   gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 335
             ||||||||||||||| ||||| | ||||||||| || ||||||||||| |||||||||
Sbjct: 43892 gggaccacaatatgtttgcactactttctggacttttgtttgtaccaactgcagtgga 43835
to top
>dbj|AK101729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F19, full
           insert sequence
          Length = 3225

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 257 gtgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggaccttc 314
           ||||||||| ||||||| | |||| |||||||||||||| || |||||||||||||||
Sbjct: 338 gtgcatcaattgcaacagtgtggggccacaatatgtatgtaccaatttctggaccttc 395
to top
>dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT03K19, TM0214,
             complete sequence
          Length = 95881

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                       
Query: 278   gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 335
             ||||||||||||||| ||||||||||||||||| || ||||| || || |||||||||
Sbjct: 62610 gggaccacaatatgtgtgcacaaatttctggacgtttgtttgcacaaactgcagtgga 62553



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 363   aaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaaggaggagga 422
             ||||| ||||| ||||| |||||||||||||||||||| |  || || |||| |||||||
Sbjct: 62092 aaatcagtttcaatggcaaaatttactgcacaagaagttagcgcacttcaagaaggagga 62033

                
Query: 423   aat 425
             |||
Sbjct: 62032 aat 62030
to top
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b,
             complete sequence
          Length = 92148

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 278   gggaccacaatatgtatgcacaaatttctggaccttcgtttgtaccaattgcagtgga 335
             ||||||||||||||| ||||| ||||||||||| || ||||| || || |||||||||
Sbjct: 22329 gggaccacaatatgtgtgcacgaatttctggacgtttgtttgcactaactgcagtgga 22272



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 360   gtgaaatctgtttccatggctaaatttactgcacaagaagtcactgctctacaaggagga 419
             ||||||||  |||| ||||||||||||||| | |||||||| | ||| || |||| ||||
Sbjct: 21784 gtgaaatcaatttcaatggctaaatttacttcgcaagaagttattgcacttcaagaagga 21725

                   
Query: 420   ggaaat 425
             ||||||
Sbjct: 21724 ggaaat 21719



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 194   gaaggaggacgagaagaacgagcgggtaatacgcgggctgctcaagct 241
             ||||||||||||||| |||||||| || || || || |||||||||||
Sbjct: 24424 gaaggaggacgagaaaaacgagcgcgtcattcgaggtctgctcaagct 24377
to top
>ref|NM_119415.2| Arabidopsis thaliana unknown protein AT4G32630 mRNA, complete cds
          Length = 2352

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 258 tgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggac 310
           |||||||| ||||| | | |||| ||||||||||||||| ||| |||||||||
Sbjct: 314 tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 366
to top
>gb|AY735660.1| Arabidopsis thaliana hypothetical protein AT4G32630 mRNA, complete
           cds
          Length = 2387

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 258 tgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggac 310
           |||||||| ||||| | | |||| ||||||||||||||| ||| |||||||||
Sbjct: 314 tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 366
to top
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0432B10
          Length = 131918

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 282    ccacaatatgtatgcacaaatttctggaccttc 314
              |||||||||||||| || |||||||||||||||
Sbjct: 104467 ccacaatatgtatgtaccaatttctggaccttc 104499
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 282      ccacaatatgtatgcacaaatttctggaccttc 314
                |||||||||||||| || |||||||||||||||
Sbjct: 34607173 ccacaatatgtatgtaccaatttctggaccttc 34607205
to top
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0085D07
          Length = 172483

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 282   ccacaatatgtatgcacaaatttctggaccttc 314
             |||||||||||||| || |||||||||||||||
Sbjct: 59190 ccacaatatgtatgtaccaatttctggaccttc 59222
to top
>gb|AY954862.1| Arabidopsis thaliana hypothetical protein (At4g32630) mRNA,
           complete cds
          Length = 1884

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 258 tgcatcaactgcaacaatttgggaccacaatatgtatgcacaaatttctggac 310
           |||||||| ||||| | | |||| ||||||||||||||| ||| |||||||||
Sbjct: 67  tgcatcaattgcaatagtctgggtccacaatatgtatgctcaactttctggac 119
to top
>ref|NM_001035925.1| Arabidopsis thaliana ZIGA4; DNA binding AT1G08680 (ZIGA4)
           transcript variant AT1G08680.3 mRNA, complete cds
          Length = 2566

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 285 caatatgtatgcacaaatttctggaccttcgt 316
           |||||||| ||||||| |||||||||||||||
Sbjct: 283 caatatgtttgcacaactttctggaccttcgt 314
to top
>ref|NM_100741.3| Arabidopsis thaliana ZIGA4; DNA binding AT1G08680 (ZIGA4)
           transcript variant AT1G08680.2 mRNA, complete cds
          Length = 2741

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 285 caatatgtatgcacaaatttctggaccttcgt 316
           |||||||| ||||||| |||||||||||||||
Sbjct: 320 caatatgtttgcacaactttctggaccttcgt 351
to top
>ref|NM_180610.2| Arabidopsis thaliana ZIGA4; DNA binding AT1G08680 (ZIGA4)
           transcript variant AT1G08680.1 mRNA, complete cds
          Length = 2744

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 285 caatatgtatgcacaaatttctggaccttcgt 316
           |||||||| ||||||| |||||||||||||||
Sbjct: 320 caatatgtttgcacaactttctggaccttcgt 351
to top
>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08,
             complete sequence
          Length = 95638

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 179   gatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgctcaa 238
             ||||| |||| ||||||||||||| |||| ||||||| |||  || || |  ||||||||
Sbjct: 45712 gatggggagcagggtgaaggaggaggagaggaacgagagggccatccgggccctgctcaa 45771

                     
Query: 239   gctgcccg 246
             ||||||||
Sbjct: 45772 gctgcccg 45779



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 375   atggctaaatttactgcacaagaagtcactgctctacaaggaggaggaaa 424
             ||||||||||||||| | ||||||||  ||||||| |||| ||| |||||
Sbjct: 47195 atggctaaatttacttctcaagaagtttctgctcttcaagaagggggaaa 47244
to top
>gb|BT008398.1| Arabidopsis thaliana At1g08690 gene, complete cds
          Length = 1947

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 285 caatatgtatgcacaaatttctggaccttcgt 316
           |||||||| ||||||| |||||||||||||||
Sbjct: 106 caatatgtttgcacaactttctggaccttcgt 137
to top
>gb|AY081303.1| Arabidopsis thaliana unknown protein (At1g08690) mRNA, complete cds
          Length = 2392

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 285 caatatgtatgcacaaatttctggaccttcgt 316
           |||||||| ||||||| |||||||||||||||
Sbjct: 320 caatatgtttgcacaactttctggaccttcgt 351
to top
>gb|AF184145.1|AF184145 Arabidopsis thaliana ARF GAP-like zinc finger-containing protein
           ZiGA4 mRNA, complete cds
          Length = 2325

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 285 caatatgtatgcacaaatttctggaccttcgt 316
           |||||||| ||||||| |||||||||||||||
Sbjct: 259 caatatgtttgcacaactttctggaccttcgt 290
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                            
Query: 179      gatggcgagccgggtgaaggaggacgagaagaacgagcgggtaatacgcgggctgctcaa 238
                ||||| |||| ||||||||||||| |||| ||||||| |||  || || |  ||||||||
Sbjct: 26348359 gatggggagcagggtgaaggaggaggagaggaacgagagggccatccgggccctgctcaa 26348418

                        
Query: 239      gctgcccg 246
                ||||||||
Sbjct: 26348419 gctgcccg 26348426



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 375      atggctaaatttactgcacaagaagtcactgctctacaaggaggaggaaa 424
                ||||||||||||||| | ||||||||  ||||||| |||| ||| |||||
Sbjct: 26349842 atggctaaatttacttctcaagaagtttctgctcttcaagaagggggaaa 26349891
to top
>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I,
             complete sequence
          Length = 133843

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 285   caatatgtatgcacaaatttctggaccttcgt 316
             |||||||| ||||||| |||||||||||||||
Sbjct: 61227 caatatgtttgcacaactttctggaccttcgt 61258
to top
>dbj|AK176415.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-14-I23
          Length = 2243

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 285 caatatgtatgcacaaatttctggaccttcgt 316
           |||||||| ||||||| |||||||||||||||
Sbjct: 283 caatatgtttgcacaactttctggaccttcgt 314
to top
>gb|AC087474.9| Homo sapiens chromosome 15, clone RP11-350A1, complete sequence
          Length = 185221

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 361   tgaaatctgtttccatggctaaattt 386
             ||||| ||||||||||||||||||||
Sbjct: 58993 tgaaacctgtttccatggctaaattt 58968
to top
>gb|AC016142.22| Homo sapiens 3 BAC RP11-166N6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96959

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 361   tgaaatctgtttccatggctaaattt 386
             |||||||||||| |||||||||||||
Sbjct: 80759 tgaaatctgtttacatggctaaattt 80734
to top
>emb|AL772239.8| Mouse DNA sequence from clone RP23-179O4 on chromosome 2, complete
              sequence
          Length = 233097

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 434    tagagaaatatttttcaaggaatgggattc 463
              |||| |||||||||||||||||| ||||||
Sbjct: 171386 tagaaaaatatttttcaaggaattggattc 171415
to top
>emb|AJ315087.1|MFA315087 Multidentia fanshawei internal transcribed spacer 1 (ITS1), 5.8S
           rRNA gene and internal transcribed spacer 2 (ITS2)
          Length = 636

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 173 gcgggcgatggcgagccgggtgaaggagga 202
           ||||||||||||| |||||| |||||||||
Sbjct: 120 gcgggcgatggcgcgccgggggaaggagga 91
to top
>gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosome 15, complete sequence
          Length = 165103

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 45     gcgacaacaaaagaggggacc 65
              |||||||||||||||||||||
Sbjct: 124959 gcgacaacaaaagaggggacc 124939
to top
>emb|CR626886.6| Zebrafish DNA sequence from clone CH211-255I3 in linkage group 16,
              complete sequence
          Length = 165396

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 287    atatgtatgcacaaatttctg 307
              |||||||||||||||||||||
Sbjct: 151620 atatgtatgcacaaatttctg 151640
to top
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced
          Length = 1285452

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 284    acaatatgtatgcacaaattt 304
              |||||||||||||||||||||
Sbjct: 250003 acaatatgtatgcacaaattt 249983
to top
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
          Length = 197252

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 282    ccacaatatgtatgcacaaatttctggac 310
              ||||||||||||||| ||| |||||||||
Sbjct: 152516 ccacaatatgtatgctcaactttctggac 152544
to top
>emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BAC clone F4D11 (ESSAII project)
          Length = 101715

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 282   ccacaatatgtatgcacaaatttctggac 310
             ||||||||||||||| ||| |||||||||
Sbjct: 78555 ccacaatatgtatgctcaactttctggac 78527
to top
>emb|CR848041.4| Zebrafish DNA sequence from clone DKEY-4K21 in linkage group 21,
             complete sequence
          Length = 177962

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 488   cagtaatacggacaaattgaggaat 512
             |||||||| ||||||||||||||||
Sbjct: 87235 cagtaatatggacaaattgaggaat 87211
to top
>emb|BX511222.10| Zebrafish DNA sequence from clone DKEY-250J7 in linkage group 18,
              complete sequence
          Length = 151023

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 488    cagtaatacggacaaattgaggaat 512
              |||||||| ||||||||||||||||
Sbjct: 123323 cagtaatatggacaaattgaggaat 123299
to top
>gb|AC104029.5| Homo sapiens chromosome 8, clone RP11-478B14, complete sequence
          Length = 177443

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 284    acaatatgtatgcacaaattt 304
              |||||||||||||||||||||
Sbjct: 151729 acaatatgtatgcacaaattt 151749
to top
>gb|AC104000.5| Homo sapiens chromosome 8, clone RP11-97N12, complete sequence
          Length = 156855

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   acaatatgtatgcacaaattt 304
             |||||||||||||||||||||
Sbjct: 97734 acaatatgtatgcacaaattt 97714
to top
>gb|AC067752.5| Homo sapiens chromosome 10 clone RP11-335G23, complete sequence
          Length = 188453

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 550   gagaaagaagctctgatagac 570
             |||||||||||||||||||||
Sbjct: 60137 gagaaagaagctctgatagac 60157
to top
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene,
              alternatively spliced, complete cds
          Length = 1421559

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 284    acaatatgtatgcacaaattt 304
              |||||||||||||||||||||
Sbjct: 250003 acaatatgtatgcacaaattt 249983
to top
>emb|AL359693.11| Human DNA sequence from clone RP11-244G12 on chromosome 6, complete
             sequence
          Length = 149696

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   aggtgcatcaactgcaacaa 274
             ||||||||||||||||||||
Sbjct: 99598 aggtgcatcaactgcaacaa 99617
to top
>emb|AL139397.8| Human DNA sequence from clone RP11-445O16 on chromosome Xp11.1-11.22
             Contains the gene for a novel protein similar to spindlin,
             a novel gene, a spindlin 2 (SPIN2) pseudogene and a CpG
             island, complete sequence
          Length = 136839

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tgaaggaggacgagaagaac 212
             ||||||||||||||||||||
Sbjct: 13510 tgaaggaggacgagaagaac 13491
to top
>gb|AC162877.2| Mus musculus chromosome 7, clone RP24-211E6, complete sequence
          Length = 158727

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   gtgctagagaaatatttttc 449
             ||||||||||||||||||||
Sbjct: 76479 gtgctagagaaatatttttc 76460
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 168     ttgcggcgggcgatggcgagccgggtga 195
               |||||||||||| |||||||| ||||||
Sbjct: 3402080 ttgcggcgggcggtggcgagctgggtga 3402053
to top
>emb|CR932968.2| Medicago truncatula chromosome 5 clone mth2-8e17, COMPLETE SEQUENCE
          Length = 128179

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   ggacaaattgaggaatttca 516
             ||||||||||||||||||||
Sbjct: 33377 ggacaaattgaggaatttca 33396
to top
>emb|AJ579566.1|BCO579566 Botrydiopsis constricta chloroplast partial rbcL gene for
            ribulose-1,5-bisphosphate carboxylase/oxygenase
          Length = 1368

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  aaatttctggaccttcgttt 318
            ||||||||||||||||||||
Sbjct: 1303 aaatttctggaccttcgttt 1284
to top
>gb|AF388659.1| Apis mellifera 1D-myo-inositol-trisphosphate 3-kinase (ip3k) gene,
             complete cds, alternatively spliced; and NFRKB-like
             protein gene, complete cds
          Length = 21538

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   ctagagaaatatttttcaag 452
             ||||||||||||||||||||
Sbjct: 12245 ctagagaaatatttttcaag 12264
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ggcgagccgggtgaaggagg 201
              ||||||||||||||||||||
Sbjct: 417557 ggcgagccgggtgaaggagg 417576
to top
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    ctgcaacaatttgggaccac 285
              ||||||||||||||||||||
Sbjct: 953605 ctgcaacaatttgggaccac 953624
to top
>emb|BX842544.1|CNS0ADXP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS69ZG01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2358

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 285 caatatgtatgcacaaatttctggaccttcgt 316
           |||||||| ||| ||| |||||||||||||||
Sbjct: 320 caatatgtttgcgcaactttctggaccttcgt 351
to top
>gb|AC156946.1| Pan troglodytes BAC clone CH251-342L21 from chromosome unknown,
             complete sequence
          Length = 170162

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   tgaaatctgtttccatggct 380
             ||||||||||||||||||||
Sbjct: 71917 tgaaatctgtttccatggct 71898
to top
>emb|CR931652.1| Streptococcus pneumoniae strain 34355 (serotype 10f)
          Length = 18532

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  aaattgaggaatttcatcaa 520
            ||||||||||||||||||||
Sbjct: 5220 aaattgaggaatttcatcaa 5201
to top
>emb|CR931651.1| Streptococcus pneumoniae strain Gro Norge (serotype 10c)
          Length = 18126

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  aaattgaggaatttcatcaa 520
            ||||||||||||||||||||
Sbjct: 5134 aaattgaggaatttcatcaa 5115
to top
>emb|CR931650.1| Streptococcus pneumoniae strain 423/82 (serotype 10b)
          Length = 16991

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  aaattgaggaatttcatcaa 520
            ||||||||||||||||||||
Sbjct: 5192 aaattgaggaatttcatcaa 5173
to top
>emb|CR931649.1| Streptococcus pneumoniae strain 10061/38 (serotype 10a)
          Length = 17290

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  aaattgaggaatttcatcaa 520
            ||||||||||||||||||||
Sbjct: 5489 aaattgaggaatttcatcaa 5470
to top
>emb|CR931720.1| Streptococcus pneumoniae strain L351 (serotype 47a)
          Length = 17250

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  aaattgaggaatttcatcaa 520
            ||||||||||||||||||||
Sbjct: 5557 aaattgaggaatttcatcaa 5538
to top
>emb|CR931700.1| Streptococcus pneumoniae strain 7098/41 (serotype 33c)
          Length = 15918

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  aaattgaggaatttcatcaa 520
            ||||||||||||||||||||
Sbjct: 5193 aaattgaggaatttcatcaa 5174
to top
>emb|CR931695.1| Streptococcus pneumoniae strain nr. 34374 (serotype 31)
          Length = 22164

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  aaattgaggaatttcatcaa 520
            ||||||||||||||||||||
Sbjct: 5570 aaattgaggaatttcatcaa 5551
to top
>emb|CT025675.12| Mouse DNA sequence from clone RP24-289M11 on chromosome 14, complete
             sequence
          Length = 147656

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   gtgaaatctgtttccatggc 379
             ||||||||||||||||||||
Sbjct: 49977 gtgaaatctgtttccatggc 49996
to top
>gb|AC108833.9| Mus musculus chromosome 14, clone RP23-263F4, complete sequence
          Length = 171398

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    gtgaaatctgtttccatggc 379
              ||||||||||||||||||||
Sbjct: 113742 gtgaaatctgtttccatggc 113761
to top
>gb|AE016831.1| Enterococcus faecalis V583 plasmid pTEF2, complete sequence
          Length = 57660

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   atcaaatatgtttacgtgga 535
             ||||||||||||||||||||
Sbjct: 57004 atcaaatatgtttacgtgga 56985
to top
>gb|AC110621.6| Mus musculus BAC clone RP23-157I3 from 7, complete sequence
          Length = 202956

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    gtgctagagaaatatttttc 449
              ||||||||||||||||||||
Sbjct: 130565 gtgctagagaaatatttttc 130584


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,473,993
Number of Sequences: 3902068
Number of extensions: 5473993
Number of successful extensions: 114976
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114580
Number of HSP's gapped (non-prelim): 394
length of query: 634
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 611
effective length of database: 17,143,297,704
effective search space: 10474554897144
effective search space used: 10474554897144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top