ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| basd2f09 | 591 | AV922776 | full | emb|X97771.1|HVPSII10K H.vulgare mRNA for PSII 10kD protein Length = 575 | 63 | full | PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 138 | 21 | -- | --- | - | -- | --- | - |
| basd2f08 | 627 | AV922775 | not_full | emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 | 500 | not_full | XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) Length = 290 | 98 | -- | --- | - | -- | --- | - |
| basd2f07 | 310 | AV922774 | not_full | ref|XM_472398.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1035 | 60 | not_full | ESTE_PSEFL (P22862) Arylesterase (EC 3.1.1.2) (Aryl-ester hydrolase) (PFE) Length = 271 | 71 | -- | --- | - | -- | --- | - |
| basd2f06 | 601 | AV922773 | not_full | ref|XM_481414.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1698 | 63 | not_full | FA62A_PONPY (Q5RAG2) Protein FAM62A Length = 1104 | 185 | -- | --- | - | -- | --- | - |
| basd2f05 | 571 | AV922772 | full | emb|X78185.1|CLHVRPL23 H.vulgare chloroplast rpl23 and rpl2 genes Length = 1841 | 373 | full | RK23_HORVU (P69668) Chloroplast 50S ribosomal protein L23 Length = 93 | 267 | -- | --- | - | -- | --- | - |
| basd2f04 | 658 | AV922771 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 433 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| basd2f03 | 489 | AV836241 | not_full | gb|AY106419.1| Zea mays PCO091622 mRNA sequence Length = 1693 | 44 | not_full | IF39_ARATH (Q9C5Z1) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) (p82) Length = 712 | 14 | -- | --- | - | -- | --- | - |
| basd2f02 | 624 | AV922770 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2f01 | 286 | AV836240 | not_full | gb|AC183989.2| Pan troglodytes BAC clone CH251-207E6 from chromosome 2, complete sequence Length = 163596 | 21 | not_full | E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C) Length = 1412 | 3 | -- | --- | - | -- | --- | - |
| basd2e23 | 560 | AV922769 | not_full | emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophosphorylase Length = 1783 | 385 | not_full | UGPA_HORVU (Q43772) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 473 | 22 | -- | --- | - | -- | --- | - |
| basd2e22 | 576 | AV922768 | not_full | gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 | 395 | not_full | CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 263 | 102 | -- | --- | - | -- | --- | - |
| basd2e21 | 713 | AV922767 | not_full | ref|XM_467417.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3468 | 76 | not_full | DFD_DROME (P07548) Homeotic protein deformed Length = 586 | 10 | -- | --- | - | -- | --- | - |
| basd2e20 | 224 | AV836239 | not_full | gb|AY109476.1| Zea mays CL1535_1 mRNA sequence Length = 5375 | 13 | not_full | MYO5A_CHICK (Q02440) Myosin-5A (Myosin Va) (Dilute myosin heavy chain, non-muscle) (Myosin heavy chain p190) (Myosin-V) Length = 1829 | 28 | -- | --- | - | -- | --- | - |
| basd2e18 | 61 | AV836238 | not_full | gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 | 47 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2e17 | 581 | AV922766 | full | gb|AY236152.1| Triticum aestivum cytosolic malate dehydrogenase mRNA, partial cds Length = 683 | 133 | not_full | MDHC2_ARATH (P57106) Malate dehydrogenase, cytoplasmic 2 (EC 1.1.1.37) Length = 332 | 337 | -- | --- | - | -- | --- | - |
| basd2e16 | 640 | AV922765 | not_full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 152 | not_full | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 | 28 | -- | --- | - | -- | --- | - |
| basd2e15 | 652 | AV922764 | not_full | emb|X56782.1|TA1B38 T.aestivum 1b-c38 gene for HBP-1b (leucine zipper type transcription factor) Length = 2204 | 156 | full | HBP1B_WHEAT (P23923) Transcription factor HBP-1b(c38) Length = 332 | 47 | -- | --- | - | -- | --- | - |
| basd2e13 | 134 | AV836237 | not_full | gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence Length = 1556 | 28 | not_full | FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) Length = 662 | 5 | -- | --- | - | -- | --- | - |
| basd2e12 | 35 | AV836236 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2e11 | 562 | AV922763 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 44 | not_full | DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 | 220 | -- | --- | - | -- | --- | - |
| basd2e10 | 595 | AV922762 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_KLULA (Q6CQE5) Protein TAR1 Length = 109 | 2 | -- | --- | - | -- | --- | - |
| basd2e08 | 181 | AV922761 | not_full | ref|XM_466278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 | 42 | not_full | SUBF_BACSU (P16397) Bacillopeptidase F precursor (EC 3.4.21.-) (Esterase) (RP-I protease) (90 kDa serine proteinase) Length = 1433 | 2 | -- | --- | - | -- | --- | - |
| basd2e07 | 281 | AV922760 | not_full | ref|XM_466278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 | 13 | not_full | SUBF_BACSU (P16397) Bacillopeptidase F precursor (EC 3.4.21.-) (Esterase) (RP-I protease) (90 kDa serine proteinase) Length = 1433 | 24 | -- | --- | - | -- | --- | - |
| basd2e06 | 62 | AV836235 | not_full | ref|XM_614245.2| PREDICTED: Bos taurus similar to ladybird homeobox homolog 1 (LOC534470), mRNA Length = 2409 | 275 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2e05 | 327 | AV836234 | not_full | gb|BC087376.1| Xenopus laevis hypothetical LOC495988, mRNA (cDNA clone MGC:99141 IMAGE:7205981), complete cds Length = 1160 | 39 | not_full | ZG14_PONPY (Q5RA17) Gastric cancer antigen Zg14 homolog Length = 280 | 25 | -- | --- | - | -- | --- | - |
| basd2e04 | 594 | AV836233 | not_full | ref|XM_472603.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3342 | 36 | not_full | MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle myosin heavy chain IIc) (NMHC II-C) Length = 2000 | 6 | -- | --- | - | -- | --- | - |
| basd2e02 | 217 | AV836232 | not_full | dbj|AK104337.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D06, full insert sequence Length = 2349 | 54 | not_full | YP74_CAEEL (Q09221) Hypothetical protein B0228.4 Length = 1633 | 5 | -- | --- | - | -- | --- | - |
| basd2e01 | 357 | AV922759 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2d24 | 476 | AV922758 | full | dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 | 40 | not_full | XCP1_ARATH (O65493) Xylem cysteine proteinase 1 precursor (EC 3.4.22.-) (AtXCP1) Length = 355 | 103 | -- | --- | - | -- | --- | - |
| basd2d23 | 493 | AV922757 | not_full | ref|NM_194132.2| Oryza sativa (japonica cultivar-group), mRNA Length = 559 | 86 | not_full | AREG_HUMAN (P15514) Amphiregulin precursor (AR) (Colorectum cell-derived growth factor) (CRDGF) Length = 252 | 6 | -- | --- | - | -- | --- | - |
| basd2d22 | 649 | AV922756 | not_full | gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 | 37 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2d20 | 671 | AV836231 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 417 | not_full | RS6_RHOS4 (Q3J1M1) 30S ribosomal protein S6 Length = 132 | 15 | -- | --- | - | -- | --- | - |
| basd2d19 | 380 | AV836230 | not_full | dbj|AK073797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067G11, full insert sequence Length = 2453 | 11 | full | SYEP_MOUSE (Q8CGC7) Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1512 | 29 | -- | --- | - | -- | --- | - |
| basd2d18 | 282 | AV922755 | not_full | emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 | 81 | not_full | NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 precursor (LTP Cw-18) (PKG2316) Length = 115 | 80 | -- | --- | - | -- | --- | - |
| basd2d17 | 654 | AV922754 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 150 | not_full | YHK8_YEAST (P38776) Hypothetical transport protein YHR048W Length = 514 | 4 | -- | --- | - | -- | --- | - |
| basd2d16 | 528 | AV922753 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | POF13_SCHPO (O94334) F-box protein pof13 Length = 396 | 7 | -- | --- | - | -- | --- | - |
| basd2d15 | 175 | AV922752 | not_full | dbj|D30809.1|WHTHPB1B Wheat gene for transcription factor HBP-1b(c38), partial cds Length = 6706 | 28 | not_full | FXL17_MOUSE (Q9QZN1) F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat protein 17) (F-box only protein 13) (Fragment) Length = 462 | 1 | -- | --- | - | -- | --- | - |
| basd2d14 | 657 | AV922751 | not_full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 152 | not_full | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 | 28 | -- | --- | - | -- | --- | - |
| basd2d13 | 412 | AV922750 | not_full | gb|AY103914.1| Zea mays PCO130298 mRNA sequence Length = 1127 | 396 | not_full | ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast precursor Length = 289 | 436 | -- | --- | - | -- | --- | - |
| basd2d12 | 516 | AV922749 | not_full | gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 | 500 | not_full | CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase) (Choline acetylase) (ChAT) Length = 748 | 5 | -- | --- | - | -- | --- | - |
| basd2d11 | 467 | AV922748 | not_full | dbj|AK062410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E12, full insert sequence Length = 620 | 100 | not_full | OSR8_ORYSA (Q9LRI7) Hydrophobic protein OSR8 Length = 72 | 35 | -- | --- | - | -- | --- | - |
| basd2d09 | 601 | AV922747 | not_full | gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence Length = 1457 | 148 | not_full | CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments) Length = 1262 | 22 | -- | --- | - | -- | --- | - |
| basd2d08 | 533 | AV922746 | not_full | dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 | 220 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2d06 | 506 | AV922745 | not_full | gb|AF005086.1|AF005086 Triticum aestivum heat shock protein 70 (hsp70) mRNA, partial cds Length = 390 | 500 | not_full | HSP72_LYCES (P27322) Heat shock cognate 70 kDa protein 2 Length = 644 | 500 | -- | --- | - | -- | --- | - |
| basd2d05 | 640 | AV922744 | not_full | gb|AY552749.1| Hordeum vulgare subsp. vulgare 18S ribosomal RNA gene, partial sequence Length = 1014 | 500 | not_full | TIP11_ORYSA (P50156) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) Length = 250 | 76 | -- | --- | - | -- | --- | - |
| basd2d04 | 683 | AV922743 | not_full | gb|AY104663.1| Zea mays PCO114914 mRNA sequence Length = 1013 | 188 | not_full | GPX4_ARATH (Q8L910) Probable glutathione peroxidase 4 (EC 1.11.1.9) Length = 170 | 115 | -- | --- | - | -- | --- | - |
| basd2d03 | 551 | AV922742 | not_full | gb|AY104663.1| Zea mays PCO114914 mRNA sequence Length = 1013 | 187 | not_full | GPX4_ARATH (Q8L910) Probable glutathione peroxidase 4 (EC 1.11.1.9) Length = 170 | 114 | -- | --- | - | -- | --- | - |
| basd2d02 | 638 | AV922741 | not_full | gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence Length = 1457 | 249 | not_full | CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments) Length = 1262 | 19 | -- | --- | - | -- | --- | - |
| basd2c24 | 659 | AV922740 | not_full | dbj|AK066244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L05, full insert sequence Length = 1138 | 500 | not_full | RBP1B_ARATH (Q8RWG8) Ran-binding protein 1 homolog b Length = 217 | 27 | -- | --- | - | -- | --- | - |
| basd2c22 | 522 | AV922739 | not_full | gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 | 31 | -- | --- | 0 | -- | --- | - | -- | --- | - |
