ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2f05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X78185.1|CLHVRPL23 H.vulgare chloroplast rpl23 and rpl2 genes Length = 1841 Score = 1001 bits (505), Expect = 0.0 Identities = 529/538 (98%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 34 cataggagggaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagt 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 cataggagggaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagt 69 Query: 94 cttcgtttattgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagaca 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 cttcgtttattgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagaca 129 Query: 154 gaaataaagcattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccat 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 gaaataaagcattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccat 189 Query: 214 cgactacctggaaaaggtagaagaataggacctattctgggccatacaatgcattacaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 cgactacctggaaaaggtagaagaataggacctattctgggccatacaatgcattacaga 249 Query: 274 cgtatgatcattacccttcaaccgggttattctattccacttctagatagagnnnnnnnc 333 |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 250 cgtatgatcattacccttcaaccgggttattctattccacttctagatagagaaaaaaac 309 Query: 334 taaaggagaatacttaataatatggcgaaacatttatacaaaacacctatcccgagcaca 393 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 310 taaaggagaatacttaataatacggcgaaacatttatacaaaacacctatcccgagcaca 369 Query: 394 cgcaagggaaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatgga 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 cgcaagggaaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatgga 429 Query: 454 cggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggg 513 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 430 cggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcataga-gg 488 Query: 514 gggaggtcataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 gggaggtcataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 546
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 971 bits (490), Expect = 0.0 Identities = 550/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 59213 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 59271 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 59272 gaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatata 59331 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59332 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 59391 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 59392 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 59451 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59452 gacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 59511 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 59512 attctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcga 59571 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59572 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 59631 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 59632 aatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgtaatg 59691 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 59692 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 59750 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 59751 atcgattttcgacggaatcaaaaagacata 59780 Score = 971 bits (490), Expect = 0.0 Identities = 550/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 5905 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 5847 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5846 gaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatata 5787 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5786 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 5727 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 5726 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 5667 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5666 gacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 5607 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 5606 attctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcga 5547 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5546 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 5487 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5486 aatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgtaatg 5427 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5426 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 5368 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 5367 atcgattttcgacggaatcaaaaagacata 5338 Score = 444 bits (224), Expect = e-121 Identities = 252/260 (96%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 120807 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 120866 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120867 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 120926 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 120927 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 120986 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 120987 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaactgg 121046 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 121047 g-tattctattccacttcta 121065
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 971 bits (490), Expect = 0.0 Identities = 550/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 138769 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 138827 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138828 gaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatata 138887 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138888 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 138947 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 138948 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 139007 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139008 gacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 139067 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 139068 attctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcga 139127 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139128 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 139187 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 139188 aatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgtaatg 139247 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 139248 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 139306 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 139307 atcgattttcgacggaatcaaaaagacata 139336 Score = 971 bits (490), Expect = 0.0 Identities = 550/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 85462 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 85404 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 85403 gaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatata 85344 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85343 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 85284 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 85283 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 85224 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85223 gacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 85164 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 85163 attctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcga 85104 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85103 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 85044 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 85043 aatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgtaatg 84984 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 84983 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 84925 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 84924 atcgattttcgacggaatcaaaaagacata 84895 Score = 444 bits (224), Expect = e-121 Identities = 252/260 (96%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 59180 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 59239 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59240 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 59299 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 59300 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 59359 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 59360 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaactgg 59419 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 59420 g-tattctattccacttcta 59438
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 132128 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 132186 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132187 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 132246 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132247 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 132306 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 132307 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 132366 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132367 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 132426 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 132427 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 132486 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 132487 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 132546 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132547 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 132606 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132607 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 132665 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 132666 atcgattttcgacggaatcaaaaagacata 132695 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 83028 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 82970 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82969 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 82910 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82909 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 82850 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 82849 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 82790 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82789 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 82730 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 82729 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 82670 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 82669 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 82610 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82609 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 82550 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 82549 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 82491 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 82490 atcgattttcgacggaatcaaaaagacata 82461 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 55875 catacaatgcattacagacgtatgatcattaccctttaaccgggttattctattccactt 55934 Query: 316 ctagatagag 325 |||||||||| Sbjct: 55935 ctagatagag 55944 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 55814 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 55872
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 132128 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 132186 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132187 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 132246 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132247 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 132306 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 132307 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 132366 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132367 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 132426 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 132427 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 132486 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 132487 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 132546 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132547 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 132606 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132607 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 132665 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 132666 atcgattttcgacggaatcaaaaagacata 132695 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 83028 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 82970 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82969 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 82910 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82909 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 82850 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 82849 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 82790 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82789 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 82730 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 82729 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 82670 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 82669 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 82610 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82609 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 82550 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 82549 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 82491 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 82490 atcgattttcgacggaatcaaaaagacata 82461 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 55875 catacaatgcattacagacgtatgatcattaccctttaaccgggttattctattccactt 55934 Query: 316 ctagatagag 325 |||||||||| Sbjct: 55935 ctagatagag 55944 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 55814 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 55872
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 132077 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 132135 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132136 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 132195 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132196 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 132255 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 132256 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 132315 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132316 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 132375 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 132376 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 132435 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 132436 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 132495 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132496 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 132555 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132556 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 132614 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 132615 atcgattttcgacggaatcaaaaagacata 132644 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 82973 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 82915 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82914 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 82855 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82854 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 82795 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 82794 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 82735 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82734 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 82675 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 82674 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 82615 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 82614 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 82555 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82554 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 82495 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 82494 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 82436 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 82435 atcgattttcgacggaatcaaaaagacata 82406 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 55823 catacaatgcattacagacgtatgatcattaccctttaaccgggttattctattccactt 55882 Query: 316 ctagatagag 325 |||||||||| Sbjct: 55883 ctagatagag 55892 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 55762 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 55820
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 137971 ctcgaattcttatcgatactggaactcagagc-ataggggggaaagtcgatttatggatg 138029 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138030 gaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatata 138089 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138090 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 138149 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 138150 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 138209 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138210 gacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 138269 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 138270 attctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcga 138329 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138330 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 138389 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 138390 aatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgtaatg 138449 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138450 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 138508 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 138509 atcgattttcgacggaatcaaaaagacata 138538 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 84766 ctcgaattcttatcgatactggaactcagagc-ataggggggaaagtcgatttatggatg 84708 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 84707 gaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatata 84648 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84647 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 84588 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 84587 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 84528 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84527 gacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 84468 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 84467 attctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcga 84408 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84407 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 84348 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 84347 aatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgtaatg 84288 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 84287 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 84229 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 84228 atcgattttcgacggaatcaaaaagacata 84199 Score = 436 bits (220), Expect = e-119 Identities = 252/260 (96%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 58563 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 58622 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58623 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 58682 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 58683 tctttggtgttaaggtagtagctgtgaatagccatcgactacccgg-aaaggtagaagaa 58741 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 58742 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaactgg 58801 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 58802 g-tattctattccacttcta 58820
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 132102 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 132160 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132161 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 132220 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132221 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 132280 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 132281 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 132340 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132341 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 132400 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 132401 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 132460 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 132461 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 132520 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132521 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 132580 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132581 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 132639 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 132640 atcgattttcgacggaatcaaaaagacata 132669 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 83016 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 82958 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82957 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 82898 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82897 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 82838 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 82837 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 82778 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82777 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 82718 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 82717 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 82658 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 82657 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 82598 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82597 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 82538 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 82537 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 82479 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 82478 atcgattttcgacggaatcaaaaagacata 82449 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 55867 catacaatgcattacagacgtatgatcattaccctttaaccgggttattctattccactt 55926 Query: 316 ctagatagag 325 |||||||||| Sbjct: 55927 ctagatagag 55936 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 55806 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 55864
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 67724 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 67782 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67783 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 67842 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67843 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 67902 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 67903 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 67962 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67963 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 68022 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 68023 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 68082 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 68083 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 68142 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68143 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 68202 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 68203 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 68261 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 68262 atcgattttcgacggaatcaaaaagacata 68291 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 55637 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 55579 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55578 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 55519 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55518 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 55459 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 55458 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 55399 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55398 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 55339 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 55338 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 55279 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 55278 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 55219 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55218 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 55159 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 55158 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 55100 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 55099 atcgattttcgacggaatcaaaaagacata 55070
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 9215453 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 9215395 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9215394 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 9215335 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9215334 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 9215275 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 9215274 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 9215215 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9215214 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 9215155 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 9215154 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 9215095 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 9215094 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 9215035 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9215034 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 9214975 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9214974 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 9214916 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 9214915 atcgattttcgacggaatcaaaaagacata 9214886 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 9109698 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 9109756 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9109757 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 9109816 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9109817 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 9109876 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 9109877 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 9109936 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9109937 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 9109996 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 9109997 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 9110056 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 9110057 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 9110116 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9110117 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 9110176 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9110177 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 9110235 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 9110236 atcgattttcgacggaatcaaaaagacata 9110265 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 9097611 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 9097553 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9097552 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 9097493 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9097492 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 9097433 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 9097432 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 9097373 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9097372 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 9097313 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 9097312 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 9097253 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 9097252 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 9097193 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9097192 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 9097133 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9097132 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 9097074 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 9097073 atcgattttcgacggaatcaaaaagacata 9097044 Score = 948 bits (478), Expect = 0.0 Identities = 547/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 23631854 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 23631796 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23631795 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 23631736 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23631735 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 23631676 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||| | Sbjct: 23631675 ttggtgttaaggtagtagctatgaatagccatcgactacccggaaagggtagaagaatgg 23631616 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23631615 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 23631556 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 23631555 attctattccacttctagatagagaaaaaagctaaaggagaatacttaataatatgacga 23631496 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| Sbjct: 23631495 aacatttatacaaaacacctatcccgagcacatgcaagggaaccatagataggcaagtga 23631436 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23631435 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 23631376 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 23631375 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 23631317 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 23631316 atcgattttcgacggaatcaaaaagacata 23631287 Score = 157 bits (79), Expect = 5e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 364 catttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaa 423 |||||||||||||||| ||||| |||||||| |||||||||| |||| ||| |||||||| Sbjct: 22824030 catttatacaaaacacttatcctgagcacactcaagggaaccatagataggtaagtgaaa 22823971 Query: 424 tccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattc 482 |||||| || |||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 22823970 tccaattcatgaaataatttaatccatggacggcaccattgtggtaaaggtcgtaattc 22823912 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 244 cctattctgggccatacaatgcattacagacgtatgatca 283 |||||||| || |||||||||||||| ||||||||||||| Sbjct: 2073032 cctattctaggacatacaatgcattatagacgtatgatca 2073071 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 101 tattgggaaagaatcaatatacttttaatgtcgaatcgggattcactaa 149 |||||||||| ||| |||||||||||||||| ||| ||||| |||||| Sbjct: 14916685 tattgggaaaaaattaatatacttttaatgttaaatagggatccactaa 14916637 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 101 tattgggaaagaatcaatatacttttaatgtcgaatcgggattcactaa 149 |||||||||| ||| |||||||||||||||| ||| ||||| |||||| Sbjct: 14514993 tattgggaaaaaattaatatacttttaatgttaaatagggatccactaa 14514945 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 145 actaagacagaaataaagcattgggtcgaactcttctttggtgt 188 ||||||||||| |||| |||| ||||||||||||||| ||||| Sbjct: 14916619 actaagacagacgtaaaacattaggtcgaactcttcttcggtgt 14916576 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Minus Query: 145 actaagacagaaataaagcattgggtcgaactcttctttggtgttaaggtggtagctgtg 204 ||||||||||| |||| |||| |||||||||||||| ||||| |||| |||| |||| Sbjct: 14514927 actaagacagacgtaaaacattaggtcgaactcttctccggtgtaaaggaagtagttgtg 14514868 Query: 205 aatagccatc 214 |||| |||| Sbjct: 14514867 tatagtcatc 14514858
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 14450672 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 14450730 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14450731 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 14450790 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14450791 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 14450850 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 14450851 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 14450910 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14450911 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 14450970 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 14450971 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 14451030 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 14451031 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 14451090 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14451091 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 14451150 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14451151 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 14451209 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 14451210 atcgattttcgacggaatcaaaaagacata 14451239
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 14188744 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 14188802 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14188803 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 14188862 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14188863 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 14188922 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 14188923 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 14188982 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14188983 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 14189042 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 14189043 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 14189102 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 14189103 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 14189162 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14189163 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 14189222 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14189223 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 14189281 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 14189282 atcgattttcgacggaatcaaaaagacata 14189311 Score = 69.9 bits (35), Expect = 9e-09 Identities = 118/141 (83%), Gaps = 6/141 (4%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaa--gtcttcgtttattggg 107 |||||||||||||||||||| || || ||| ||||||||||| ||||| || |||||| Sbjct: 17769072 gatttatggatggaatcaaacacacactatctacagaaaaaaatgtctttgtctattggt 17769013 Query: 108 aaagaatca-atatacttttaatg-tcgaatcgggattcactaagacagaaataaagcat 165 ||| ||||| || | |||||||| | ||||| |||||||||||||| ||||||||||| Sbjct: 17769012 aaataatcatgtacaattttaatgtttgaatcaggattcactaagac--aaataaagcat 17768955 Query: 166 tgggtcgaactcttctttggt 186 ||| |||||||||||||| Sbjct: 17768954 catgtcaaactcttctttggt 17768934
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 138041 ctcgaattcttatcgatactggaactcagagc-ataggggggaaagtcgatttatggatg 138099 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138100 gaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatata 138159 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138160 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 138219 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 138220 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 138279 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138280 gacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 138339 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 138340 attctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcga 138399 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138400 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 138459 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 138460 aatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgtaatg 138519 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138520 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 138578 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 138579 atcgattttcgacggaatcaaaaagacata 138608 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 84796 ctcgaattcttatcgatactggaactcagagc-ataggggggaaagtcgatttatggatg 84738 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 84737 gaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatata 84678 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84677 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 84618 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 84617 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 84558 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84557 gacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 84498 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 84497 attctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcga 84438 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84437 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 84378 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 84377 aatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgtaatg 84318 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 84317 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 84259 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 84258 atcgattttcgacggaatcaaaaagacata 84229 Score = 444 bits (224), Expect = e-121 Identities = 252/260 (96%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 58573 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 58632 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58633 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 58692 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 58693 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 58752 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 58753 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaactgg 58812 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 58813 g-tattctattccacttcta 58831
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 142475 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 142533 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142534 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 142593 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142594 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 142653 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 142654 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 142713 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142714 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 142773 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 142774 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 142833 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 142834 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 142893 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142894 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 142953 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142954 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 143012 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 143013 atcgattttcgacggaatcaaaaagacata 143042
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 50237 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 50295 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50296 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 50355 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50356 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 50415 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 50416 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 50475 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50476 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 50535 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 50536 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 50595 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 50596 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 50655 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50656 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 50715 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 50716 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 50774 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 50775 atcgattttcgacggaatcaaaaagacata 50804
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 73625 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 73683 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73684 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 73743 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73744 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 73803 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 73804 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 73863 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73864 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 73923 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 73924 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 73983 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 73984 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 74043 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74044 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 74103 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 74104 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 74162 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 74163 atcgattttcgacggaatcaaaaagacata 74192
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 132070 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 132128 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132129 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 132188 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132189 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 132248 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 132249 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 132308 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132309 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 132368 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 132369 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 132428 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 132429 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 132488 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132489 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 132548 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132549 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 132607 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 132608 atcgattttcgacggaatcaaaaagacata 132637 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 82969 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 82911 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82910 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 82851 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82850 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 82791 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 82790 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 82731 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82730 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 82671 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 82670 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 82611 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 82610 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 82551 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82550 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 82491 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 82490 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 82432 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 82431 atcgattttcgacggaatcaaaaagacata 82402 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 55802 catacaatgcattacagacgtatgatcattaccctttaaccgggttattctattccactt 55861 Query: 316 ctagatagag 325 |||||||||| Sbjct: 55862 ctagatagag 55871 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 55741 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 55799
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 955 bits (482), Expect = 0.0 Identities = 548/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| Sbjct: 70805 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgattaatggatg 70863 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 70864 gaatcaaatacgcagtatttatagaaaaaagtcttcgtttattgggaaagaatcaatata 70923 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70924 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 70983 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 70984 ttggtgttaaggtagtagctgtgaatagccatcgactacctggaaagggtagaagaatgg 71043 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71044 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 71103 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 71104 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 71163 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 71164 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 71223 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71224 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 71283 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 71284 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 71342 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 71343 atcgattttcgacggaatcaaaaagacata 71372 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 129010 catacaatgcattacagacgtatgattattaccctttaaccgggttattctattccactt 129069 Query: 316 ctagatagag 325 |||||||||| Sbjct: 129070 ctagatagag 129079 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 128949 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 129007
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 955 bits (482), Expect = 0.0 Identities = 548/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| Sbjct: 10289480 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgattaatggatg 10289538 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10289539 gaatcaaatacgcagtatttatagaaaaaagtcttcgtttattgggaaagaatcaatata 10289598 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10289599 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 10289658 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 10289659 ttggtgttaaggtagtagctgtgaatagccatcgactacctggaaagggtagaagaatgg 10289718 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10289719 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 10289778 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 10289779 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 10289838 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 10289839 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 10289898 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10289899 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 10289958 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10289959 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 10290017 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 10290018 atcgattttcgacggaatcaaaaagacata 10290047 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| Sbjct: 22252200 ctcgaattcttatcgatactggaactcagagc-ataggagagaaagtcgatttatggatg 22252142 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22252141 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 22252082 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22252081 cttttaatgtcgaatcgggattcactaagactgaaataaagcattgggtcgaactcttct 22252022 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||| | Sbjct: 22252021 ttggtgttaaggtagtagctgtgaatagccatcgactgcccggaaagggtagaagaatgg 22251962 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22251961 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 22251902 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 22251901 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 22251842 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 22251841 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 22251782 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22251781 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 22251722 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22251721 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 22251663 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 22251662 atcgattttcgacggaatcaaaaagacata 22251633 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 10374819 ctcgaattcttatcgatactagaactcagagc-ataggagggaaagtcgatttatggatg 10374761 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10374760 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 10374701 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10374700 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 10374641 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 10374640 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 10374581 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10374580 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 10374521 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct: 10374520 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacgacga 10374461 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 10374460 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 10374401 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10374400 aatcaaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcataatt 10374341 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10374340 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 10374282 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 10374281 atcgattttcgacggaatcaaaaagacata 10374252 Score = 236 bits (119), Expect = 6e-59 Identities = 129/131 (98%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 441 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7670374 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 7670315 Query: 501 aaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacggaatc 560 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 7670314 aaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatc 7670256 Query: 561 aaaaagacata 571 ||||||||||| Sbjct: 7670255 aaaaagacata 7670245 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 10347685 catacaatgcattacagacgtatgattattaccctttaaccgggttattctattccactt 10347744 Query: 316 ctagatagag 325 |||||||||| Sbjct: 10347745 ctagatagag 10347754 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 10347624 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 10347682
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 955 bits (482), Expect = 0.0 Identities = 548/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 9254043 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 9254101 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9254102 gaatcaaatacgcagtatttacaaaaaaaagtcttcgtttattgggaaagaatcaatata 9254161 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9254162 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 9254221 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 9254222 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 9254281 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9254282 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 9254341 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 9254342 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 9254401 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 9254402 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 9254461 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9254462 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 9254521 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9254522 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 9254580 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 9254581 atcgattttcgacggaatcaaaaagacata 9254610 Score = 339 bits (171), Expect = 6e-90 Identities = 187/191 (97%), Gaps = 1/191 (0%) Strand = Plus / Minus Query: 381 tatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacgaaataa 440 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 22320535 tatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacgaaataa 22320476 Query: 441 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22320475 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 22320416 Query: 501 aaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacggaatc 560 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 22320415 aaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatc 22320357 Query: 561 aaaaagacata 571 ||||||||||| Sbjct: 22320356 aaaaagacata 22320346 Score = 83.8 bits (42), Expect = 6e-13 Identities = 77/86 (89%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 47 gtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttatt-g 105 ||||||||||||||||||| ||||||| | |||||| | ||||||||||||||||||| | Sbjct: 88635 gtcgatttatggatggaattaaatacgtaatattta-aaaaaaaagtcttcgtttattgg 88693 Query: 106 ggaaagaatcaatatacttttaatgt 131 ||||| |||||||||| || |||||| Sbjct: 88694 ggaaataatcaatatagttgtaatgt 88719 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 365 atttatacaaaacacctatcc 385 ||||||||||||||||||||| Sbjct: 1558001 atttatacaaaacacctatcc 1558021
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 955 bits (482), Expect = 0.0 Identities = 548/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 65256 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 65314 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 65315 gaatcaaatacgcagtatttacaaaaaaaagtcttcgtttattgggaaagaatcaatata 65374 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65375 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 65434 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 65435 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 65494 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65495 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 65554 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 65555 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 65614 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 65615 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 65674 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65675 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 65734 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 65735 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 65793 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 65794 atcgattttcgacggaatcaaaaagacata 65823
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 955 bits (482), Expect = 0.0 Identities = 548/570 (96%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| Sbjct: 10295519 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgattaatggatg 10295577 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10295578 gaatcaaatacgcagtatttatagaaaaaagtcttcgtttattgggaaagaatcaatata 10295637 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10295638 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 10295697 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 10295698 ttggtgttaaggtagtagctgtgaatagccatcgactacctggaaagggtagaagaatgg 10295757 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10295758 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 10295817 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 10295818 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 10295877 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 10295878 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 10295937 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10295938 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 10295997 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10295998 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 10296056 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 10296057 atcgattttcgacggaatcaaaaagacata 10296086 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| Sbjct: 22264268 ctcgaattcttatcgatactggaactcagagc-ataggagagaaagtcgatttatggatg 22264210 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22264209 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 22264150 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22264149 cttttaatgtcgaatcgggattcactaagactgaaataaagcattgggtcgaactcttct 22264090 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||| | Sbjct: 22264089 ttggtgttaaggtagtagctgtgaatagccatcgactgcccggaaagggtagaagaatgg 22264030 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22264029 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 22263970 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 22263969 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 22263910 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 22263909 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 22263850 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22263849 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 22263790 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22263789 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 22263731 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 22263730 atcgattttcgacggaatcaaaaagacata 22263701 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 10380858 ctcgaattcttatcgatactagaactcagagc-ataggagggaaagtcgatttatggatg 10380800 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10380799 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 10380740 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10380739 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 10380680 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 10380679 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 10380620 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10380619 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 10380560 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct: 10380559 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacgacga 10380500 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 10380499 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 10380440 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10380439 aatcaaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcataatt 10380380 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10380379 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 10380321 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 10380320 atcgattttcgacggaatcaaaaagacata 10380291 Score = 236 bits (119), Expect = 6e-59 Identities = 129/131 (98%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 441 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7674573 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 7674514 Query: 501 aaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacggaatc 560 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 7674513 aaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatc 7674455 Query: 561 aaaaagacata 571 ||||||||||| Sbjct: 7674454 aaaaagacata 7674444 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 10353724 catacaatgcattacagacgtatgattattaccctttaaccgggttattctattccactt 10353783 Query: 316 ctagatagag 325 |||||||||| Sbjct: 10353784 ctagatagag 10353793 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 10353663 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 10353721
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 950 bits (479), Expect = 0.0 Identities = 550/571 (96%), Gaps = 4/571 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 132116 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 132174 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132175 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 132234 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132235 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 132294 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 132295 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 132354 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132355 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 132414 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 132415 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 132474 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132475 aacatttatacaaaacacctatcccgagcacacgcaagggaaccttagacaggcaagtga 132534 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132535 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 132594 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcat-aagcgcctataccgtaa 540 ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| Sbjct: 132595 ccagaggaatcattaccgcaa-gcataga-gggggaggtcataaagcgcctataccgtaa 132652 Query: 541 aatagattttcgacggaatcaaaaagacata 571 ||||||||||||||||||||||||||||||| Sbjct: 132653 aatagattttcgacggaatcaaaaagacata 132683 Score = 950 bits (479), Expect = 0.0 Identities = 550/571 (96%), Gaps = 4/571 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 82778 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 82720 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82719 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 82660 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82659 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 82600 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 82599 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 82540 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82539 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 82480 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 82479 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 82420 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 82419 aacatttatacaaaacacctatcccgagcacacgcaagggaaccttagacaggcaagtga 82360 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82359 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 82300 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcat-aagcgcctataccgtaa 540 ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| Sbjct: 82299 ccagaggaatcattaccgcaa-gcataga-gggggaggtcataaagcgcctataccgtaa 82242 Query: 541 aatagattttcgacggaatcaaaaagacata 571 ||||||||||||||||||||||||||||||| Sbjct: 82241 aatagattttcgacggaatcaaaaagacata 82211 Score = 521 bits (263), Expect = e-145 Identities = 266/267 (99%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56642 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 56701 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56702 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 56761 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 56762 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtaaaagaa 56821 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56822 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 56881 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 56882 gttattctattccacttctagatagag 56908
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 948 bits (478), Expect = 0.0 Identities = 547/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 74535 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 74477 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74476 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 74417 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74416 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 74357 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||| | Sbjct: 74356 ttggtgttaaggtagtagctatgaatagccatcgactacccggaaagggtagaagaatgg 74297 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74296 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 74237 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 74236 attctattccacttctagatagagaaaaaagctaaaggagaatacttaataatatgacga 74177 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| Sbjct: 74176 aacatttatacaaaacacctatcccgagcacatgcaagggaaccatagataggcaagtga 74117 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74116 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 74057 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 74056 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 73998 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 73997 atcgattttcgacggaatcaaaaagacata 73968
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| Sbjct: 69443 ctcgaattcttatcgatactggaactcagagc-ataggagagaaagtcgatttatggatg 69385 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69384 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 69325 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 69324 cttttaatgtcgaatcgggattcactaagactgaaataaagcattgggtcgaactcttct 69265 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||| | Sbjct: 69264 ttggtgttaaggtagtagctgtgaatagccatcgactgcccggaaagggtagaagaatgg 69205 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69204 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 69145 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 69144 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 69085 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 69084 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 69025 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69024 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 68965 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 68964 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 68906 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 68905 atcgattttcgacggaatcaaaaagacata 68876
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 81211 ctcgaattcttatcgatactagaactcagagc-ataggagggaaagtcgatttatggatg 81153 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81152 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 81093 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81092 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 81033 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 81032 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 80973 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80972 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 80913 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct: 80912 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacgacga 80853 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 80852 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 80793 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 80792 aatcaaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcataatt 80733 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 80732 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 80674 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 80673 atcgattttcgacggaatcaaaaagacata 80644 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 54077 catacaatgcattacagacgtatgattattaccctttaaccgggttattctattccactt 54136 Query: 316 ctagatagag 325 |||||||||| Sbjct: 54137 ctagatagag 54146 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 54016 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 54074
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 15275 ctcgaattcttatcgatactagaactcagagc-ataggagggaaagtcgatttatggatg 15217 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15216 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 15157 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15156 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 15097 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 15096 ttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 15037 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15036 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 14977 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct: 14976 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacgacga 14917 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 14916 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 14857 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14856 aatcaaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcataatt 14797 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14796 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 14738 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||||||||||||||| Sbjct: 14737 atcgattttcgacggaatcaaaaagacata 14708
>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190) genes, complete cds, ribosomal protein L22 (rpL22) gene, 5' end, transfer RNA-Ile and -His genes Length = 2789 Score = 924 bits (466), Expect = 0.0 Identities = 544/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 208 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 266 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 267 gaatcaaatacgcagtatttacagaaaaaagtcttgctttattgggaaagaatcaatata 326 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 386 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 387 ttggtgtataggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 446 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 506 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 507 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 566 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 567 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 626 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 686 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 687 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 745 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||| ||||||||||| Sbjct: 746 atcgattttcgacggaatgaaaaagacata 775
>gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190) genes, complete cds, transfer RNA-Ile and -His genes and photosystem II (psbA) gene, 3' end Length = 2799 Score = 924 bits (466), Expect = 0.0 Identities = 544/570 (95%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 208 ctcgaattcttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatg 266 Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 267 gaatcaaatacgcagtatttacagaaaaaagtcttgctttattgggaaagaatcaatata 326 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 386 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 387 ttggtgtataggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgg 446 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 gccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtt 506 Query: 302 attctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 507 attctattccacttctagatagagaaaaaaactaaaggagaatacttaataatacggcga 566 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtga 421 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 567 aacatttatacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtga 626 Query: 422 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 aatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaatt 686 Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 687 ccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaa 745 Query: 542 atagattttcgacggaatcaaaaagacata 571 || ||||||||||||||| ||||||||||| Sbjct: 746 atcgattttcgacggaatgaaaaagacata 775
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 809 bits (408), Expect = 0.0 Identities = 486/513 (94%), Gaps = 6/513 (1%) Strand = Plus / Minus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 348769 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 348710 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 348709 atacttttaatgtcgaatcgggattcactaagacagaaatcaagcattgggtcgaactct 348650 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 348649 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 348590 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348589 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgg 348530 Query: 299 gttattctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatgg 358 ||||||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 348529 gttattctattccacttctagatagagaaacgaactcaaggagaatacttaataatacgg 348470 Query: 359 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348469 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 348410 Query: 419 tgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgta 478 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 348409 tgaaatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgta 348350 Query: 479 attccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgt 538 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 348349 atgccagaggaatcattaccgcaaggcataga-gggggagg-----cgcgcctataccgt 348296 Query: 539 aaaatagattttcgacggaatcaaaaagacata 571 ||||| |||||||||||||||||||||||||| Sbjct: 348295 aaaatctattttcgacggaatcaaaaagacata 348263 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 1 gctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatt 53 |||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 36427 gctcgaattcttatcgatactggaactcagag-cataggagggaaagtcgatt 36478 Score = 50.1 bits (25), Expect = 0.008 Identities = 53/62 (85%), Gaps = 4/62 (6%) Strand = Plus / Minus Query: 101 tattgggaaagaatcaatatactt----ttaatgtcgaatcgggattcactaagacagaa 156 ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||| Sbjct: 521786 tattggggaagaatcaatatacttactattaatgtcgaatcaggatcaactaagaaagaa 521727 Query: 157 at 158 || Sbjct: 521726 at 521725
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 809 bits (408), Expect = 0.0 Identities = 486/513 (94%), Gaps = 6/513 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 206940 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 206999 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 207000 atacttttaatgtcgaatcgggattcactaagacagaaatcaagcattgggtcgaactct 207059 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 207060 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 207119 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207120 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgg 207179 Query: 299 gttattctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatgg 358 ||||||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 207180 gttattctattccacttctagatagagaaacgaactcaaggagaatacttaataatacgg 207239 Query: 359 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207240 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 207299 Query: 419 tgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgta 478 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 207300 tgaaatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgta 207359 Query: 479 attccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgt 538 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 207360 atgccagaggaatcattaccgcaaggcataga-gggggagg-----cgcgcctataccgt 207413 Query: 539 aaaatagattttcgacggaatcaaaaagacata 571 ||||| |||||||||||||||||||||||||| Sbjct: 207414 aaaatctattttcgacggaatcaaaaagacata 207446 Score = 809 bits (408), Expect = 0.0 Identities = 486/513 (94%), Gaps = 6/513 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 78248 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 78307 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 78308 atacttttaatgtcgaatcgggattcactaagacagaaatcaagcattgggtcgaactct 78367 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 78368 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 78427 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78428 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgg 78487 Query: 299 gttattctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatgg 358 ||||||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 78488 gttattctattccacttctagatagagaaacgaactcaaggagaatacttaataatacgg 78547 Query: 359 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78548 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 78607 Query: 419 tgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgta 478 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 78608 tgaaatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgta 78667 Query: 479 attccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgt 538 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 78668 atgccagaggaatcattaccgcaaggcataga-gggggagg-----cgcgcctataccgt 78721 Query: 539 aaaatagattttcgacggaatcaaaaagacata 571 ||||| |||||||||||||||||||||||||| Sbjct: 78722 aaaatctattttcgacggaatcaaaaagacata 78754 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 1 gctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatt 53 |||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 421115 gctcgaattcttatcgatactggaactcagag-cataggagggaaagtcgatt 421064 Score = 50.1 bits (25), Expect = 0.008 Identities = 53/62 (85%), Gaps = 4/62 (6%) Strand = Plus / Plus Query: 101 tattgggaaagaatcaatatactt----ttaatgtcgaatcgggattcactaagacagaa 156 ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||| Sbjct: 222034 tattggggaagaatcaatatacttactattaatgtcgaatcaggatcaactaagaaagaa 222093 Query: 157 at 158 || Sbjct: 222094 at 222095 Score = 50.1 bits (25), Expect = 0.008 Identities = 53/62 (85%), Gaps = 4/62 (6%) Strand = Plus / Plus Query: 101 tattgggaaagaatcaatatactt----ttaatgtcgaatcgggattcactaagacagaa 156 ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||| Sbjct: 93342 tattggggaagaatcaatatacttactattaatgtcgaatcaggatcaactaagaaagaa 93401 Query: 157 at 158 || Sbjct: 93402 at 93403
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 809 bits (408), Expect = 0.0 Identities = 486/513 (94%), Gaps = 6/513 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 540945 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 541004 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 541005 atacttttaatgtcgaatcgggattcactaagacagaaatcaagcattgggtcgaactct 541064 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 541065 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 541124 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541125 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgg 541184 Query: 299 gttattctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatgg 358 ||||||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 541185 gttattctattccacttctagatagagaaacgaactcaaggagaatacttaataatacgg 541244 Query: 359 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541245 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 541304 Query: 419 tgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgta 478 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 541305 tgaaatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgta 541364 Query: 479 attccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgt 538 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 541365 atgccagaggaatcattaccgcaaggcataga-gggggagg-----cgcgcctataccgt 541418 Query: 539 aaaatagattttcgacggaatcaaaaagacata 571 ||||| |||||||||||||||||||||||||| Sbjct: 541419 aaaatctattttcgacggaatcaaaaagacata 541451 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 1 gctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatt 53 |||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 222525 gctcgaattcttatcgatactggaactcagag-cataggagggaaagtcgatt 222474 Score = 50.1 bits (25), Expect = 0.008 Identities = 53/62 (85%), Gaps = 4/62 (6%) Strand = Plus / Minus Query: 101 tattgggaaagaatcaatatactt----ttaatgtcgaatcgggattcactaagacagaa 156 ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| |||| Sbjct: 355076 tattggggaagaatcaatatacttactattaatgtcgaatcaggatcaactaagaaagaa 355017 Query: 157 at 158 || Sbjct: 355016 at 355015
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 809 bits (408), Expect = 0.0 Identities = 486/513 (94%), Gaps = 6/513 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 462907 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 462966 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 462967 atacttttaatgtcgaatcgggattcactaagacagaaatcaagcattgggtcgaactct 463026 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 463027 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 463086 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463087 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgg 463146 Query: 299 gttattctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatgg 358 ||||||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 463147 gttattctattccacttctagatagagaaacgaactcaaggagaatacttaataatacgg 463206 Query: 359 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463207 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 463266 Query: 419 tgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgta 478 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 463267 tgaaatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggtcgta 463326 Query: 479 attccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgt 538 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 463327 atgccagaggaatcattaccgcaaggcataga-gggggagg-----cgcgcctataccgt 463380 Query: 539 aaaatagattttcgacggaatcaaaaagacata 571 ||||| |||||||||||||||||||||||||| Sbjct: 463381 aaaatctattttcgacggaatcaaaaagacata 463413 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 1 gctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatt 53 |||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 339530 gctcgaattcttatcgatactggaactcagag-cataggagggaaagtcgatt 339479
>emb|X12850.1|CHTARL23 Wheat chloroplast rpl23 gene for ribosomal protein L23 (= dispersed repeat 9; located in large inverted repeat B region) Length = 380 Score = 684 bits (345), Expect = 0.0 Identities = 371/381 (97%), Gaps = 1/381 (0%) Strand = Plus / Plus Query: 11 ttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaatcaaat 70 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 1 ttatcgatactggaactcagagc-ataggagggaaagtcgatttatggatggaatcaaat 59 Query: 71 acgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatacttttaatg 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 acgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatacttttaatg 119 Query: 131 tcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttggtgtta 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 tcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttggtgtta 179 Query: 191 aggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaataggacctattc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 aggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaataggacctattc 239 Query: 251 tgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttattctattc 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 tgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttattctattc 299 Query: 311 cacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttat 370 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 300 cacttctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttat 359 Query: 371 acaaaacacctatcccgagca 391 ||||||||||||||||||||| Sbjct: 360 acaaaacacctatcccgagca 380
>dbj|AK063155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-H11, full insert sequence Length = 657 Score = 622 bits (314), Expect = e-175 Identities = 365/383 (95%), Gaps = 1/383 (0%) Strand = Plus / Plus Query: 189 taaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaataggacctat 248 |||||| |||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 1 taaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgggccctat 60 Query: 249 tctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttattctat 308 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggttattctat 120 Query: 309 tccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacattt 368 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 121 tccacttctagatagagaaaaaaactaaaggagaatacttaataatatggcgaaacattt 180 Query: 369 atacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaa 428 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 181 atacaaaacacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaa 240 Query: 429 tccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagagg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagagg 300 Query: 489 aatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagatt 548 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 301 aatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgatt 359 Query: 549 ttcgacggaatcaaaaagacata 571 ||||||||||||||||||||||| Sbjct: 360 ttcgacggaatcaaaaagacata 382
>emb|X07864.1|CHZML23 Maize chloroplast rpl23 gene for ribosomal protein L23 Length = 355 Score = 579 bits (292), Expect = e-162 Identities = 339/356 (95%), Gaps = 1/356 (0%) Strand = Plus / Plus Query: 5 gaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaa 64 |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| Sbjct: 1 gaattcttatcgatactggaactcagagc-ataggggggaaagtcgatttatggatggaa 59 Query: 65 tcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatactt 124 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 60 tcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaatatactt 119 Query: 125 ttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttg 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 ttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttg 179 Query: 185 gtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaataggac 244 |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 180 gtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatgggac 239 Query: 245 ctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttatt 304 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ctattctgggacatacaatgcattacagacgtatgatcattacccttcaaccgggttatt 299 Query: 305 ctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatatggcg 360 ||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 300 ctattccacttctagatagagaaacgaactaaaggagaatacttaataatacggcg 355
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 563 bits (284), Expect = e-157 Identities = 495/564 (87%), Gaps = 9/564 (1%) Strand = Plus / Plus Query: 5 gaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaa 64 ||||||||||||||||||||||||| |||| |||| | ||||||||||||||| Sbjct: 146334 gaattcttatcgatactggaactca------tagggaagaaaatggatttatggatggaa 146387 Query: 65 tcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatactt 124 ||||||| ||||||||||||||||||||| |||| |||||||| || ||||||||||||| Sbjct: 146388 tcaaatatgcagtatttacagaaaaaagtattcggttattggggaacaatcaatatactt 146447 Query: 125 ttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttg 184 |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 146448 ctaatgtcgaatcaggatcaactaggacagaaataaagcattgggtcgaactcttctttg 146507 Query: 185 gtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaataggac 244 |||| ||||| ||||| ||||||| |||||||| || ||||| |||||||| || |||| Sbjct: 146508 gtgtcaaggtaatagctatgaatagtcatcgactcccgggaaagggtagaaggatgggac 146567 Query: 245 ctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttatt 304 ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 146568 ctattatgggacatacaatgcattacagacgtatgatcattacgcttcaaccgggttatt 146627 Query: 305 ctattccacttctagatagagnnnnnnnc-taaaggagaatacttaataatatggcgaaa 363 ||||||||| ||| |||||| | ||||| | |||||||||||| | ||| | | Sbjct: 146628 ctattccacctct-tatagagaaaagaacttaaagcaaaatacttaataacacggcaata 146686 Query: 364 catttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaa 423 |||||||||||||| ||| | ||||||||||||| ||| |||||||||| ||||||||| Sbjct: 146687 catttatacaaaacttctacctcgagcacacgcaatggagccgtagacagtcaagtgaaa 146746 Query: 424 tccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattcc 483 |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || Sbjct: 146747 tccaatccacgaaataatttgatctatggacagcatcgttgtggtaaaggtcgtaatgcc 146806 Query: 484 agaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaat 543 ||||| |||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 146807 agagggatcattaccgcagggcataga-gggggaggtcataagcgtctataccgtaaaat 146865 Query: 544 agattttcgacggaatcaaaaaga 567 || |||||||||||| ||||||| Sbjct: 146866 cgactttcgacggaatgaaaaaga 146889 Score = 563 bits (284), Expect = e-157 Identities = 495/564 (87%), Gaps = 9/564 (1%) Strand = Plus / Minus Query: 5 gaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaa 64 ||||||||||||||||||||||||| |||| |||| | ||||||||||||||| Sbjct: 88588 gaattcttatcgatactggaactca------tagggaagaaaatggatttatggatggaa 88535 Query: 65 tcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatactt 124 ||||||| ||||||||||||||||||||| |||| |||||||| || ||||||||||||| Sbjct: 88534 tcaaatatgcagtatttacagaaaaaagtattcggttattggggaacaatcaatatactt 88475 Query: 125 ttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttg 184 |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 88474 ctaatgtcgaatcaggatcaactaggacagaaataaagcattgggtcgaactcttctttg 88415 Query: 185 gtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaataggac 244 |||| ||||| ||||| ||||||| |||||||| || ||||| |||||||| || |||| Sbjct: 88414 gtgtcaaggtaatagctatgaatagtcatcgactcccgggaaagggtagaaggatgggac 88355 Query: 245 ctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttatt 304 ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 88354 ctattatgggacatacaatgcattacagacgtatgatcattacgcttcaaccgggttatt 88295 Query: 305 ctattccacttctagatagagnnnnnnnc-taaaggagaatacttaataatatggcgaaa 363 ||||||||| ||| |||||| | ||||| | |||||||||||| | ||| | | Sbjct: 88294 ctattccacctct-tatagagaaaagaacttaaagcaaaatacttaataacacggcaata 88236 Query: 364 catttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaa 423 |||||||||||||| ||| | ||||||||||||| ||| |||||||||| ||||||||| Sbjct: 88235 catttatacaaaacttctacctcgagcacacgcaatggagccgtagacagtcaagtgaaa 88176 Query: 424 tccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattcc 483 |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || Sbjct: 88175 tccaatccacgaaataatttgatctatggacagcatcgttgtggtaaaggtcgtaatgcc 88116 Query: 484 agaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaat 543 ||||| |||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 88115 agagggatcattaccgcagggcataga-gggggaggtcataagcgtctataccgtaaaat 88057 Query: 544 agattttcgacggaatcaaaaaga 567 || |||||||||||| ||||||| Sbjct: 88056 cgactttcgacggaatgaaaaaga 88033
>gb|AY167975.1| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) pseudogene, complete mitochondrial sequence Length = 2550 Score = 549 bits (277), Expect = e-153 Identities = 346/366 (94%), Gaps = 4/366 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1961 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 2020 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaa-taaagcattgggtcgaactc 177 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 2021 atacttttaatgtcgaatcgggattcactaagacagaaattcaagcattgggtcgaactc 2080 Query: 178 ttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaaga 237 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 2081 ttctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaaga 2140 Query: 238 ataggaccta-ttctgggccatacaatgcattacagacgtatgatcattacccttcaacc 296 || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2141 atgggacctatttctgggacatacaatgcattacagacgtatgatcattacccttcaacc 2200 Query: 297 gggttattctattccacttctagatagagnnnnnnnctaaaggagaatacttaataatat 356 ||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 2201 gggttattctattccacttctagatagagaaacgaactcaaggagaatacttaataatac 2260 Query: 357 ggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggca 416 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 2261 ggcgaaacatttatacaaaacacctatcccgagcacacgc-agggaa-cgtagacaggca 2318 Query: 417 agtgaa 422 |||||| Sbjct: 2319 agtgaa 2324
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 537 bits (271), Expect = e-149 Identities = 304/316 (96%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126166 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 126225 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 126226 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 126285 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 126286 acacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 126345 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126346 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 126405 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 126406 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 126464 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 126465 gaatcaaaaagacata 126480 Score = 537 bits (271), Expect = e-149 Identities = 304/316 (96%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31106 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 31165 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 31166 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 31225 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 31226 acacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 31285 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31286 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 31345 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 31346 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 31404 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 31405 gaatcaaaaagacata 31420 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 126105 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 126163 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 31045 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 31103
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 537 bits (271), Expect = e-149 Identities = 304/316 (96%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125192 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 125251 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 125252 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 125311 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 125312 acacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 125371 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125372 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 125431 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 125432 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 125490 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 125491 gaatcaaaaagacata 125506 Score = 537 bits (271), Expect = e-149 Identities = 304/316 (96%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30611 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 30670 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 30671 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 30730 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 30731 acacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 30790 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30791 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 30850 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 30851 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 30909 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 30910 gaatcaaaaagacata 30925 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 125131 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 125189 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 30550 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 30608
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 537 bits (271), Expect = e-149 Identities = 304/316 (96%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125192 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 125251 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 125252 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 125311 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 125312 acacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 125371 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125372 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 125431 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 125432 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 125490 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 125491 gaatcaaaaagacata 125506 Score = 537 bits (271), Expect = e-149 Identities = 304/316 (96%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30611 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 30670 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 30671 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 30730 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 30731 acacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 30790 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30791 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 30850 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 30851 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 30909 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 30910 gaatcaaaaagacata 30925 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 125131 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 125189 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 30550 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 30608
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 535 bits (270), Expect = e-149 Identities = 321/339 (94%), Gaps = 1/339 (0%) Strand = Plus / Minus Query: 63 aatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatac 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28408481 aatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatac 28408422 Query: 123 ttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctt 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28408421 ttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctt 28408362 Query: 183 tggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatagg 242 | |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 28408361 ttgtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatggg 28408302 Query: 243 acctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtta 302 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28408301 ccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtta 28408242 Query: 303 ttctattccacttctagatagag-nnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||| | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28408241 ttctattctatttctagatagagaaaaaaaactaaaggagaatacttaataatatggcga 28408182 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagg 400 ||||||||||||||||||||||||||||||||||||||| Sbjct: 28408181 aacatttatacaaaacacctatcccgagcacacgcaagg 28408143 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 33566398 catacaatgcattacagacgtatgatcattaccctttaaccgggttattctattccactt 33566457 Query: 316 ctagatagag 325 |||||||||| Sbjct: 33566458 ctagatagag 33566467 Score = 101 bits (51), Expect = 2e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 2 ctcgaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatg 61 |||||||||||||| ||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 5734793 ctcgaattcttatcaatactggaacttagagc-ataggagggaaagtcgatttatggatg 5734735 Query: 62 gaatcaaata 71 |||||||||| Sbjct: 5734734 gaatcaaata 5734725 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 279 gatcattacccttcaaccgggttattctattccacttctagatagag 325 ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 33527076 gatcattaccctttaaccgggttattctattccacttctagatagag 33527030 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 256 catacaatgcattacagacgtatgatcattaccctt 291 |||||||||||||||||||||||||||||||||||| Sbjct: 39114319 catacaatgcattacagacgtatgatcattaccctt 39114284 Score = 63.9 bits (32), Expect = 5e-07 Identities = 45/48 (93%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 71 acgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 39114368 acgcagtatttacagaaaaa-gttttcatttattgggaaagaatcaat 39114322 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 87 aaaaagtcttcgtttattgggaaagaatcaat 118 ||||||| ||| |||||||||||||||||||| Sbjct: 33566364 aaaaagttttcatttattgggaaagaatcaat 33566395 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 441 tttgatccatggacggcaccgttgt 465 |||||||||| |||||||||||||| Sbjct: 6578542 tttgatccatagacggcaccgttgt 6578518
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 535 bits (270), Expect = e-149 Identities = 321/339 (94%), Gaps = 1/339 (0%) Strand = Plus / Minus Query: 63 aatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatac 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123581 aatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatac 123522 Query: 123 ttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctt 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123521 ttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctt 123462 Query: 183 tggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatagg 242 | |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 123461 ttgtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaatggg 123402 Query: 243 acctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtta 302 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123401 ccctattctaggacatacaatgcattacagacgtatgatcattacccttcaaccgggtta 123342 Query: 303 ttctattccacttctagatagag-nnnnnnnctaaaggagaatacttaataatatggcga 361 |||||||| | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123341 ttctattctatttctagatagagaaaaaaaactaaaggagaatacttaataatatggcga 123282 Query: 362 aacatttatacaaaacacctatcccgagcacacgcaagg 400 ||||||||||||||||||||||||||||||||||||||| Sbjct: 123281 aacatttatacaaaacacctatcccgagcacacgcaagg 123243
>emb|X62118.1|CHACHSRG A.crassa chloroplast genes rbcL, psaI, ORF 185 and ORF 230 for large subunit of ribulose 1,5 bisphosphate carboxylase/oxygenase and apoprotein I Length = 4811 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1580 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1639 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1699 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1700 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1759 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1760 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 1819 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 1820 gttattctattccacttctagatagag 1846
>dbj|AB180928.1| Aegilops geniculata chloroplast psaI, ycf4, cemA gene for PSI small peptid, hypothetical protein, envelope membrane protein, complete and partial cds Length = 2810 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 367 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 427 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 487 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 547 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 548 gttattctattccacttctagatagag 574
>dbj|AB180927.1| Amblyopyrum muticum chloroplast psaI, ycf4, cemA gene for PSI small peptid, hypothetical protein, envelope membrane protein, complete and partial cds Length = 3594 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 360 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 420 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 480 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 540 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 541 gttattctattccacttctagatagag 567
>gb|AY836181.1| Secale strictum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3155 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1796 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1855 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1856 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1915 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1916 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1975 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1976 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2035 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2036 gttattctattccacttctagatagag 2062
>gb|AY836163.1| Haynaldia villosa ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3190 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1811 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1870 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1871 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1930 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1931 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1990 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1991 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2050 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2051 gttattctattccacttctagatagag 2077
>gb|AY836162.1| Triticum monococcum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3192 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1791 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1850 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1851 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1910 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1911 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1970 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1971 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2030 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2031 gttattctattccacttctagatagag 2057
>gb|AY836161.1| Aegilops comosa ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3171 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1792 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1851 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1852 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1911 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1912 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1971 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1972 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2031 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2032 gttattctattccacttctagatagag 2058
>gb|AY836157.1| Amblyopyrum muticum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3183 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1786 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1845 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1846 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1905 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1906 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1965 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1966 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2025 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2026 gttattctattccacttctagatagag 2052
>gb|AY836154.1| Bromus arvensis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3215 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1794 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1853 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1854 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1913 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1914 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1973 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1974 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2033 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2034 gttattctattccacttctagatagag 2060
>gb|J04106.1|AEGCPHSRA Ae.crassa chloroplast hot spot region for mutations Length = 1436 Score = 529 bits (267), Expect = e-147 Identities = 267/267 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 180 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 240 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 300 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 360 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 361 gttattctattccacttctagatagag 387
>emb|X62117.1|CHTAHSRA T.aestivum chloroplast genes rbcL, psaI, ORF 185 and ORF 230 for large subunit of ribulose 1,5 bisphosphate carboxylase/oxygenase and apoprotein I Length = 4075 Score = 521 bits (263), Expect = e-145 Identities = 266/267 (99%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1573 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1632 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1633 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1692 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1693 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtaaaagaa 1752 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1753 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 1812 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 1813 gttattctattccacttctagatagag 1839
>dbj|AB180926.1| Aegilops speltoides chloroplast psaI, ycf4, cemA gene for PSI small peptid, hypothetical protein, envelope membrane protein, complete and partial cds Length = 2808 Score = 521 bits (263), Expect = e-145 Identities = 266/267 (99%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 358 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 418 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 478 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 479 taggacctattctgggccatacaatgtattacagacgtatgatcattacccttcaaccgg 538 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 539 gttattctattccacttctagatagag 565
>dbj|AB180925.1| Aegilops markgrafii chloroplast psaI, ycf4, cemA gene for PSI small peptid, hypothetical protein, envelope membrane protein, complete and partial cds Length = 3302 Score = 521 bits (263), Expect = e-145 Identities = 266/267 (99%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 357 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 417 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 477 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 taggacctattctggaccatacaatgcattacagacgtatgatcattacccttcaaccgg 537 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 538 gttattctattccacttctagatagag 564
>gb|AY836183.1| Aegilops speltoides ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; and rbcL-psaI intergenic spacer, partial sequence; chloroplast Length = 2360 Score = 521 bits (263), Expect = e-145 Identities = 266/267 (99%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1781 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1840 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1841 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1900 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1901 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1960 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1961 taggacctattctgggccatacaatgtattacagacgtatgatcattacccttcaaccgg 2020 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2021 gttattctattccacttctagatagag 2047
>gb|AY836179.1| Psathyrostachys fragilis subsp. villosus ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and psaI gene, partial sequence; chloroplast Length = 3071 Score = 521 bits (263), Expect = e-145 Identities = 266/267 (99%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1757 atgggatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1816 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1817 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1876 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1877 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1936 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1937 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 1996 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 1997 gttattctattccacttctagatagag 2023
>gb|AY836155.1| Bromus sterilis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3234 Score = 521 bits (263), Expect = e-145 Identities = 266/267 (99%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1810 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1869 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1870 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1929 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1930 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1989 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1990 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2049 Query: 299 gttattctattccacttctagatagag 325 ||||||||| ||||||||||||||||| Sbjct: 2050 gttattctactccacttctagatagag 2076
>dbj|D28336.1|LOLMTI Lolium multiflorum mitochondrial gene Length = 2790 Score = 519 bits (262), Expect = e-144 Identities = 326/349 (93%), Gaps = 8/349 (2%) Strand = Plus / Minus Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2161 ggaaagggtagaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 2102 Query: 283 attacccttcaaccgggttattctattccacttctagatagagnnnnnnnctaaaggaga 342 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2101 attacccttcaaccgggttattctattccacttctagatagagaaaaaaactaaaggaga 2042 Query: 343 atacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggga 402 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 ata-------atacggcgaaacatttatacaaaacacctatcccgagcacacgcaaggga 1989 Query: 403 accgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgt 462 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1988 accgtagacagccaagtgaaatccaatccacgaaataatttgatccatggacggcaccgt 1929 Query: 463 tgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtca 522 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1928 tgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcataga-gggggaggtca 1870 Query: 523 taagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1869 taagcgcctataccgtaaaatccattttagacggaatcaaaaagacata 1821
>gb|AY836184.1| Taeniatherum caput-medusae ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3179 Score = 505 bits (255), Expect = e-140 Identities = 264/267 (98%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1784 atggaatcaaatacgcagtattcacagaaaaaagtcttcgtttattgggaaagaatcaat 1843 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1844 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1903 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1904 tctttggtgttaaggtggtagctgtgaatagccatcgattacctggaaaaggtagaagaa 1963 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1964 taggacctattctgggccatacaatgtattacagacgtatgatcattacccttcaaccgg 2023 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2024 gttattctattccacttctagatagag 2050
>ref|NM_195964.1| Oryza sativa (japonica cultivar-group) putative ribosomal protein L23 from chromosome 10 chloroplast insertion (OSJNBb0075K12.13), mRNA Length = 282 Score = 482 bits (243), Expect = e-133 Identities = 264/271 (97%) Strand = Plus / Plus Query: 55 atggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaat 114 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1 atggatggaatcaaatacgcagtatttatagaaaaaagtcttcgtttattgggaaagaat 60 Query: 115 caatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaa 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 caatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaa 120 Query: 175 ctcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtaga 234 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 121 ctcttctttggtgttaaggtagtagctgtgaatagccatcgactacctggaaagggtaga 180 Query: 235 agaataggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaa 294 ||||| || |||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaatgggccctattctaggacatacaatgcattacagacgtatgatcattacccttcaa 240 Query: 295 ccgggttattctattccacttctagatagag 325 ||||||||||||||||||||||||||||||| Sbjct: 241 ccgggttattctattccacttctagatagag 271
>gb|AY836173.1| Hordeum vulgare subsp. spontaneum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3110 Score = 482 bits (243), Expect = e-133 Identities = 262/267 (98%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1761 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1820 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 1821 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattggttcaaactct 1880 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1881 tctttgga-ttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1939 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1940 taggacctattctgggccgtacaatgcattacagacgtatgatcattacccttcaaccgg 1999 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2000 gttattctattccacttctagatagag 2026
>gb|AY836172.1| Hordeum murinum subsp. glaucum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3095 Score = 482 bits (243), Expect = e-133 Identities = 252/255 (98%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1797 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaaaaatcaat 1856 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1857 atacttttaatgtcgaatcaggattcactaagacagaaataaagcattgggtcgaactct 1916 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1917 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1976 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1977 taggacctattctgggccatacaatgcattacagacgtatgatcattactcttcaaccgg 2036 Query: 299 gttattctattccac 313 ||||||||||||||| Sbjct: 2037 gttattctattccac 2051
>gb|AY836171.1| Hordeum marinum subsp. gussoneanum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3108 Score = 482 bits (243), Expect = e-133 Identities = 262/267 (98%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1792 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1851 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct: 1852 atacttttaatgtcgaattgggattcactaagacagaaataaagcattggttcaaactct 1911 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1912 tctttgga-ttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1970 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1971 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2030 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2031 gttattctattccacttctagatagag 2057
>gb|AY836170.1| Hordeum erectifolium ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3102 Score = 482 bits (243), Expect = e-133 Identities = 262/267 (98%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1789 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1848 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct: 1849 atacttttaatgtcgaattgggattcactaagacagaaataaagcattggttcaaactct 1908 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1909 tctttgga-ttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1967 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1968 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2027 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2028 gttattctattccacttctagatagag 2054
>gb|AY836169.1| Hordeum brachyantherum subsp. californicum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3089 Score = 482 bits (243), Expect = e-133 Identities = 262/267 (98%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1786 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1845 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct: 1846 atacttttaatgtcgaattgggattcactaagacagaaataaagcattggttcaaactct 1905 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1906 tctttgga-ttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1964 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1965 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 2024 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2025 gttattctattccacttctagatagag 2051
>gb|AY836176.1| Peridictyon sanctum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3106 Score = 474 bits (239), Expect = e-130 Identities = 261/267 (97%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1762 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1821 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1822 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1881 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1882 tctttgg-attaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1940 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||| || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1941 taggtcccattttgggccatacaatgtattacagacgtatgatcattacccttcaaccgg 2000 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2001 gttattctattccacttctagatagag 2027
>emb|X62070.1|CHZMRPL2P Zea mays chloroplast mRNA for large ribosomal protein 2 (rpl2 gene) Length = 510 Score = 460 bits (232), Expect = e-126 Identities = 265/277 (95%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 295 ccgggttattctattccacttctagatagagnnnnnnnctaaaggagaatacttaataat 354 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 ccgggttattctattccacttctagatagagaaacgaactaaaggagaatacttaataat 60 Query: 355 atggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacagg 414 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacagg 120 Query: 415 caagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggt 474 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 121 caagtgaaatccaatccacgaaataaattgatccatggacggcaccgttgtggtaaaggt 180 Query: 475 cgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctata 534 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 181 cgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctata 239 Query: 535 ccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||| ||||||||||||||||||||||||||| Sbjct: 240 ccgtaaaatcgattttcgacggaatcaaaaagacata 276
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 456 bits (230), Expect = e-125 Identities = 293/316 (92%), Gaps = 9/316 (2%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 125099 catacaatgcattacaaacgtatgaccattacccttcaaccgggttattctattccactt 125158 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 125159 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 125218 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 125219 gcacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 125278 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 125279 aataatttgatccatggacg--------gtggtaaaggtcgtaattccagaggaatcatt 125330 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 125331 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 125389 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 125390 gaatcaaaaagacata 125405 Score = 456 bits (230), Expect = e-125 Identities = 293/316 (92%), Gaps = 9/316 (2%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 30572 catacaatgcattacaaacgtatgaccattacccttcaaccgggttattctattccactt 30631 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 30632 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 30691 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 30692 gcacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 30751 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 30752 aataatttgatccatggacg--------gtggtaaaggtcgtaattccagaggaatcatt 30803 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 30804 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 30862 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 30863 gaatcaaaaagacata 30878 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 125038 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 125096 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 30511 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 30569
>dbj|D13101.1|RICMT05 Oryza sativa (japonica cultivar-group) mitochondrial gene for tRNA-His, complete sequence, clone:pMTVSCT Length = 3019 Score = 456 bits (230), Expect = e-125 Identities = 293/316 (92%), Gaps = 9/316 (2%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 544 catacaatgcattacaaacgtatgaccattacccttcaaccgggttattctattccactt 603 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaa 375 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 604 ctagatagagaaaaaaactaaaggagaatacttaataatacggcgaaacatttatacaaa 663 Query: 376 acacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacga 435 ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 664 gcacctatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacga 723 Query: 436 aataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcatt 495 |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 724 aataatttgatccatggacg--------gtggtaaaggtcgtaattccagaggaatcatt 775 Query: 496 accgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacg 555 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 776 accgcaaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacg 834 Query: 556 gaatcaaaaagacata 571 |||||||||||||||| Sbjct: 835 gaatcaaaaagacata 850 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 483 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 541
>gb|AY836185.1| Thinopyrum bessarabicum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3054 Score = 450 bits (227), Expect = e-123 Identities = 258/267 (96%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1696 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1755 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct: 1756 atacttttaatgtcgaattgggattcactaagacagaaataaagcattggttcaaactct 1815 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1816 tctttgga-ttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1874 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||| || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1875 tagggcccattttgggccatacaatgtattacagacgtatgatcattacccttcaaccgg 1934 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 1935 gttattctattccacttctagatagag 1961
>gb|AY836182.1| Pseudoroegneria spicata ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3138 Score = 450 bits (227), Expect = e-123 Identities = 258/267 (96%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1780 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1839 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct: 1840 atacttttaatgtcgaattgggattcactaagacagaaataaagcattggttcaaactct 1899 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1900 tctttgga-ttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1958 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||| || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1959 tagggcccattttgggccatacaatgtattacagacgtatgatcattacccttcaaccgg 2018 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2019 gttattctattccacttctagatagag 2045
>gb|AY836174.1| Thinopyrum elongatum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3158 Score = 450 bits (227), Expect = e-123 Identities = 258/267 (96%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1779 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1838 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct: 1839 atacttttaatgtcgaattgggattcactaagacagaaataaagcattggttcaaactct 1898 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 tctttgga-ttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1957 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||| || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1958 tagggcccattttgggccatacaatgtattacagacgtatgatcattacccttcaaccgg 2017 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2018 gttattctattccacttctagatagag 2044
>emb|X12848.1|CHZMREP9 Maize chloroplast dispersed repeat (9) DNA for nonfunctional rpl23' homologue segment Length = 478 Score = 444 bits (224), Expect = e-121 Identities = 252/260 (96%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 116 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattgggaaagaatcaat 175 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 235 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 236 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 295 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 296 tgggacctattctgggacatacaatgcattacagacgtatgatcattacccttcaactgg 355 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 356 g-tattctattccacttcta 374
>gb|AY836166.1| Festucopsis serpentini ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3166 Score = 442 bits (223), Expect = e-121 Identities = 257/267 (96%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1785 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1844 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| | Sbjct: 1845 atacttttaatgtcgaattgggattcactaagacagaaataaagcattggttcaaacttt 1904 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1905 tctttgga-ttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1963 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||| || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1964 tagggcccattttgggccatacaatgtattacagacgtatgatcattacccttcaaccgg 2023 Query: 299 gttattctattccacttctagatagag 325 ||||||||||||||||||||||||||| Sbjct: 2024 gttattctattccacttctagatagag 2050
>gb|AY836178.1| Psathyrostachys fragilis subsp. fragilis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 3089 Score = 434 bits (219), Expect = e-118 Identities = 256/267 (95%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1757 atgggatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1816 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 1817 atacttttaatgtcaaattgggattcactaagacagaaataaagcattgggtcaaactct 1876 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1877 tctttgg-gttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1935 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1936 tagggcccattttgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 1995 Query: 299 gttattctattccacttctagatagag 325 |||||| ||||| ||||||| |||||| Sbjct: 1996 gttattttattctacttctatatagag 2022
>emb|X53066.1|CHZMRPL2 Maize chloroplast rpl2 gene for ribosomal protein L2 and tRNA-His gene Length = 1797 Score = 426 bits (215), Expect = e-116 Identities = 234/239 (97%), Gaps = 1/239 (0%) Strand = Plus / Plus Query: 333 ctaaaggagaatacttaataatatggcgaaacatttatacaaaacacctatcccgagcac 392 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 15 ctaaaggagaatacttaataatacggcgaaacatttatacaaaacacctatcccgagcac 74 Query: 393 acgcaagggaaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatgg 452 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 75 acgcaagggaaccgtagacaggcaagtgaaatccaatccacgaaataaattgatccatgg 134 Query: 453 acggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagagg 512 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 135 acggcaccgttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-g 193 Query: 513 ggggaggtcataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 194 ggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatcaaaaagacata 252
>gb|AY836180.1| Psathyrostachys stoloniformis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 2309 Score = 426 bits (215), Expect = e-116 Identities = 255/267 (95%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1707 atgggatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1766 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 1767 atacttttaatgtcaaattgggattcactaagacagaaataaagcattgggtcaaactct 1826 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1827 tctttgg-gttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 1885 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||| || ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1886 tagggcccattttgcgccatacaatgcattacagacgtatgatcattacccttcaaccgg 1945 Query: 299 gttattctattccacttctagatagag 325 |||||| ||||| ||||||| |||||| Sbjct: 1946 gttattttattctacttctatatagag 1972
>emb|X12849.1|CHTAREP9 Wheat chloroplast dispersed repeat (9) DNA for nonfunctional rpl23' homologue segment (located in large single-copy region LSCR) Length = 781 Score = 412 bits (208), Expect = e-112 Identities = 252/264 (95%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 62 gaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatata 121 |||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| Sbjct: 394 gaatcaaatacgcagtatttactgaaataagtcttcgtttattgggtttgaatcaatata 453 Query: 122 cttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttct 181 ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 454 cttttaatgtcgaat-gggattcactaagactgaaataaagcattgggtcgtactcttct 512 Query: 182 ttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaatag 241 ||||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||||| Sbjct: 513 ttggtgttaaggtggtagctgtgtatagccatcgactacctagaaa-ggtaaaagaatag 571 Query: 242 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggtt 631 Query: 302 attctattccacttctagatagag 325 |||||||||||||||||||||||| Sbjct: 632 attctattccacttctagatagag 655
>gb|AY016335.1| Phragmites australis haplotype 4 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1074 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 408 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 467 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 468 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 527 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 528 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 587 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 588 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 647 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 648 g-tattctattccacttcta 666
>gb|AY016334.1| Phragmites australis haplotype 3 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1078 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 413 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 472 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 473 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 532 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 533 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 592 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 593 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 652 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 653 g-tattctattccacttcta 671
>gb|AY016333.1| Phragmites australis haplotype 2 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1071 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 406 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 465 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 466 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 525 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 526 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 585 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 586 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 645 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 646 g-tattctattccacttcta 664
>gb|AY016332.1| Phragmites australis haplotype 1 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1105 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 409 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 468 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 469 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 528 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 529 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 588 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 589 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 648 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 649 g-tattctattccacttcta 667
>gb|AF457391.1| Phragmites australis haplotype 14 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1073 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 405 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 464 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 465 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 524 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 525 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 584 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 585 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 644 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 645 g-tattctattccacttcta 663
>gb|AF457390.1| Phragmites australis haplotype 13 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1072 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 409 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 468 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 469 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 528 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 529 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 588 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 589 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 648 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 649 g-tattctattccacttcta 667
>gb|AF457389.1| Phragmites australis haplotype 12 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1099 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 404 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 463 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 464 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 523 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 524 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 583 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 584 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 643 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 644 g-tattctattccacttcta 662
>gb|AF457388.1| Phragmites australis haplotype 11 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1099 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 404 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 463 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 464 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 523 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 524 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 583 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 584 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 643 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 644 g-tattctattccacttcta 662
>gb|AF457387.1| Phragmites australis haplotype 10 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1067 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 404 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 463 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 464 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 523 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 524 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 583 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 584 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 643 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 644 g-tattctattccacttcta 662
>gb|AF457386.1| Phragmites australis haplotype 9 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1072 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 409 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 468 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 469 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 528 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 529 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 588 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 589 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 648 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 649 g-tattctattccacttcta 667
>gb|AF457385.1| Phragmites australis haplotype 8 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1088 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 404 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 463 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 464 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 523 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 524 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 583 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 584 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 643 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 644 g-tattctattccacttcta 662
>gb|AF457384.1| Phragmites australis haplotype 7 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1098 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 405 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 464 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 465 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 524 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 525 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 584 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 585 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 644 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 645 g-tattctattccacttcta 663
>gb|AF457383.1| Phragmites australis haplotype 6 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1067 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 404 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 463 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 464 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 523 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 524 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 583 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 584 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 643 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 644 g-tattctattccacttcta 662
>gb|AF457382.1| Phragmites australis haplotype 5 rbcL-psaI intergenic spacer, chloroplast sequence Length = 1067 Score = 404 bits (204), Expect = e-109 Identities = 247/260 (95%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 404 atggaatcaaatacgcagtatttacagaaaagagtcttcgtttattaggaaagaatcaat 463 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 464 atacttctaatgtcgaattgggattcactaaggcagaaataaagcattgggtcgaactct 523 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaa 238 |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 524 tctttggtgttaaggtagtagctgtgaatagccatcgactacccggaaagggtagaagaa 583 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 584 cgggacctattctgggacatacaatgcattacagacgtacgatcattacccttcaaccgg 643 Query: 299 gttattctattccacttcta 318 | |||||||||||||||||| Sbjct: 644 g-tattctattccacttcta 662
>ref|XM_472842.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 375 bits (189), Expect = e-100 Identities = 208/213 (97%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 359 cgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaag 418 ||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| Sbjct: 5 cgaaacatttatacaaaacacctatcccgagcacatgcaagggaaccatagataggcaag 64 Query: 419 tgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgta 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 tgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgta 124 Query: 479 attccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgt 538 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 125 attccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgcctataccgt 183 Query: 539 aaaatagattttcgacggaatcaaaaagacata 571 ||||| ||||||||||||||||||||||||||| Sbjct: 184 aaaatcgattttcgacggaatcaaaaagacata 216
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 355 bits (179), Expect = 1e-94 Identities = 248/271 (91%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 158425 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 158484 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct: 158485 ttggggaaaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaag 158544 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| |||| ||||||| |||||||| || Sbjct: 158545 cattgggtcgaactcttctttggtgtcaaggtaaaagctatgaatagtcatcgactcccg 158604 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 158605 ggaaagggtagaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 158664 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 158665 attacgcttcaaccgggttattctattccac 158695 Score = 355 bits (179), Expect = 1e-94 Identities = 248/271 (91%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 90874 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 90815 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct: 90814 ttggggaaaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaag 90755 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| |||| ||||||| |||||||| || Sbjct: 90754 cattgggtcgaactcttctttggtgtcaaggtaaaagctatgaatagtcatcgactcccg 90695 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 90694 ggaaagggtagaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 90635 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 90634 attacgcttcaaccgggttattctattccac 90604 Score = 280 bits (141), Expect = 5e-72 Identities = 199/217 (91%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 355 atggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacagg 414 ||||||| ||||||||||||||| ||| ||||||||||||||| ||| |||||||||| Sbjct: 158743 atggcgatacatttatacaaaacttctaccccgagcacacgcaatggagccgtagacagt 158802 Query: 415 caagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggt 474 ||||||||||||||| ||||||||||||||||| |||||| ||| |||||| |||||||| Sbjct: 158803 caagtgaaatccaatacacgaaataatttgatctatggacagcatcgttgtagtaaaggt 158862 Query: 475 cgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctata 534 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 158863 cgtaatgccagaggaatcattaccgcagggcataga-gggggaggtcataagcgtctata 158921 Query: 535 ccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||| ||||||||||||||| ||||||||||| Sbjct: 158922 ccgtaaaatcgattttcgacggaatgaaaaagacata 158958 Score = 280 bits (141), Expect = 5e-72 Identities = 199/217 (91%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 355 atggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacagg 414 ||||||| ||||||||||||||| ||| ||||||||||||||| ||| |||||||||| Sbjct: 90556 atggcgatacatttatacaaaacttctaccccgagcacacgcaatggagccgtagacagt 90497 Query: 415 caagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggt 474 ||||||||||||||| ||||||||||||||||| |||||| ||| |||||| |||||||| Sbjct: 90496 caagtgaaatccaatacacgaaataatttgatctatggacagcatcgttgtagtaaaggt 90437 Query: 475 cgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctata 534 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 90436 cgtaatgccagaggaatcattaccgcagggcataga-gggggaggtcataagcgtctata 90378 Query: 535 ccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||| ||||||||||||||| ||||||||||| Sbjct: 90377 ccgtaaaatcgattttcgacggaatgaaaaagacata 90341
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 349 bits (176), Expect = 6e-93 Identities = 242/264 (91%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| | Sbjct: 158091 gatttatggatggaatcaaatatgcagtatttacagaaaaaagtattcggttattgggga 158150 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||| Sbjct: 158151 acaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgga 158210 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| |||||| |||||||||||||||| || ||||| | Sbjct: 158211 tcgaactcttctttggtgtcaaggtagtagctatgaatagccatcgactcccgggaaagg 158270 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| || | |||||||||||||||||||||||||||||||| | Sbjct: 158271 gtagaagaatgggacctattatgcgacatacaatgcattacagacgtatgatcattacgc 158330 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 158331 ttcaaccgggttattctattccac 158354 Score = 349 bits (176), Expect = 6e-93 Identities = 242/264 (91%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| | Sbjct: 91854 gatttatggatggaatcaaatatgcagtatttacagaaaaaagtattcggttattgggga 91795 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||| Sbjct: 91794 acaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgga 91735 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| |||||| |||||||||||||||| || ||||| | Sbjct: 91734 tcgaactcttctttggtgtcaaggtagtagctatgaatagccatcgactcccgggaaagg 91675 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| || | |||||||||||||||||||||||||||||||| | Sbjct: 91674 gtagaagaatgggacctattatgcgacatacaatgcattacagacgtatgatcattacgc 91615 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 91614 ttcaaccgggttattctattccac 91591 Score = 266 bits (134), Expect = 7e-68 Identities = 207/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 |||||||||||| ||||| | ||||||||||||||| ||| ||| ||||||||||| || Sbjct: 158391 aatacttaataacatggccatacatttatacaaaacttctacccctagcacacgcaaagg 158450 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| |||| ||||||||||||||||| || |||||| |||||| ||| || Sbjct: 158451 agccgtagacagtcaagcgaaatccaatccacgaacaaaattgatctatggacagcatcg 158510 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| Sbjct: 158511 ttgtggtaaaggtcgtaatgccagaggaataattaccgcaaggcataga-gggggaggtc 158569 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 158570 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 158619 Score = 266 bits (134), Expect = 7e-68 Identities = 207/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 |||||||||||| ||||| | ||||||||||||||| ||| ||| ||||||||||| || Sbjct: 91554 aatacttaataacatggccatacatttatacaaaacttctacccctagcacacgcaaagg 91495 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| |||| ||||||||||||||||| || |||||| |||||| ||| || Sbjct: 91494 agccgtagacagtcaagcgaaatccaatccacgaacaaaattgatctatggacagcatcg 91435 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| Sbjct: 91434 ttgtggtaaaggtcgtaatgccagaggaataattaccgcaaggcataga-gggggaggtc 91376 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 91375 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 91326
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 347 bits (175), Expect = 2e-92 Identities = 247/271 (91%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 151492 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 151551 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct: 151552 ttggggaaaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaag 151611 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 151612 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccc 151671 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| | || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 151672 ggaaaggttaaaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 151731 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 151732 attacgcttcaaccgggttattctattccac 151762 Score = 347 bits (175), Expect = 2e-92 Identities = 247/271 (91%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 85272 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 85213 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct: 85212 ttggggaaaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaag 85153 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 85152 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccc 85093 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| | || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 85092 ggaaaggttaaaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 85033 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 85032 attacgcttcaaccgggttattctattccac 85002 Score = 281 bits (142), Expect = 1e-72 Identities = 209/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 151791 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 151850 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||| | ||| | Sbjct: 151851 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatgggcagcatca 151910 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| Sbjct: 151911 ttgtggtaaaggtcgtaatgccagaggaatcattaccgtaaggcataga-gggggaggtc 151969 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 151970 ataagcgtctataccgtaaaatagattttcgacgaaatacaaaagacata 152019 Score = 281 bits (142), Expect = 1e-72 Identities = 209/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 84973 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 84914 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||| | ||| | Sbjct: 84913 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatgggcagcatca 84854 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| Sbjct: 84853 ttgtggtaaaggtcgtaatgccagaggaatcattaccgtaaggcataga-gggggaggtc 84795 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 84794 ataagcgtctataccgtaaaatagattttcgacgaaatacaaaagacata 84745
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 347 bits (175), Expect = 2e-92 Identities = 247/271 (91%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 152494 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 152553 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct: 152554 ttggggaaaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaag 152613 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 152614 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccc 152673 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| | || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 152674 ggaaaggttaaaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 152733 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 152734 attacgcttcaaccgggttattctattccac 152764 Score = 347 bits (175), Expect = 2e-92 Identities = 247/271 (91%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 86155 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 86096 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct: 86095 ttggggaaaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaag 86036 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 86035 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccc 85976 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| | || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 85975 ggaaaggttaaaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 85916 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 85915 attacgcttcaaccgggttattctattccac 85885 Score = 274 bits (138), Expect = 3e-70 Identities = 208/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 152793 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 152852 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 152853 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctgtgggcagcatca 152912 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| Sbjct: 152913 ttgtggtaaaggtcgtaatgccagaggaataattaccgcaaggcataga-gggggaggtc 152971 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 152972 ataagcgtctataccgtaaaatagattttcgacgaaatgcaaaagacata 153021 Score = 274 bits (138), Expect = 3e-70 Identities = 208/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 85856 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 85797 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 85796 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctgtgggcagcatca 85737 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| Sbjct: 85736 ttgtggtaaaggtcgtaatgccagaggaataattaccgcaaggcataga-gggggaggtc 85678 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 85677 ataagcgtctataccgtaaaatagattttcgacgaaatgcaaaagacata 85628
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 341 bits (172), Expect = 2e-90 Identities = 241/264 (91%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 159011 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 159070 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 159071 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 159130 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| | Sbjct: 159131 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccgggaaagg 159190 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 159191 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 159250 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 159251 ttcaaccgggttattctattccac 159274 Score = 341 bits (172), Expect = 2e-90 Identities = 241/264 (91%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 91049 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 90990 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 90989 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 90930 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| | Sbjct: 90929 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccgggaaagg 90870 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 90869 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 90810 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 90809 ttcaaccgggttattctattccac 90786 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| | Sbjct: 159303 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatag 159362 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 159363 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatcg 159422 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 159423 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 159481 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 159482 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 159531 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| | Sbjct: 90757 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatag 90698 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 90697 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatcg 90638 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 90637 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 90579 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 90578 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 90529
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 154085 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 154144 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 154145 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 154204 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 154205 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 154264 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 154265 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 154324 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 154325 attacgcttcaaccgggttattctattccac 154355 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 88545 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 88486 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 88485 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 88426 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 88425 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 88366 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 88365 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 88306 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 88305 attacgcttcaaccgggttattctattccac 88275 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 154384 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 154443 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 154444 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 154503 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 154504 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 154562 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 154563 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 154612 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 88246 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 88187 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 88186 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 88127 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 88126 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 88068 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 88067 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 88018
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 339 bits (171), Expect = 6e-90 Identities = 240/263 (91%) Strand = Plus / Plus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| || Sbjct: 153403 atttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattggggaa 153462 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 153463 aaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgggt 153522 Query: 171 cgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaagg 230 |||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| || Sbjct: 153523 cgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccgggaaaggg 153582 Query: 231 tagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccct 290 ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| || Sbjct: 153583 tagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgct 153642 Query: 291 tcaaccgggttattctattccac 313 ||||||||||||||||||||||| Sbjct: 153643 tcaaccgggttattctattccac 153665 Score = 339 bits (171), Expect = 6e-90 Identities = 240/263 (91%) Strand = Plus / Minus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| || Sbjct: 88503 atttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattggggaa 88444 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 88443 aaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgggt 88384 Query: 171 cgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaagg 230 |||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| || Sbjct: 88383 cgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccgggaaaggg 88324 Query: 231 tagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccct 290 ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| || Sbjct: 88323 tagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgct 88264 Query: 291 tcaaccgggttattctattccac 313 ||||||||||||||||||||||| Sbjct: 88263 tcaaccgggttattctattccac 88241 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 153694 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 153753 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 153754 agccgtagacagccaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 153813 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 153814 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 153872 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 153873 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 153922 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 88212 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 88153 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 88152 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 88093 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 88092 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 88034 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 88033 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 87984
>emb|X65615.1|CHSARPL23 S.alba chloroplast rp123 and rp12 genes for ribosomal proteins L23 and L2 Length = 2060 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||| ||||| |||||||||||||| |||||| |||| ||| Sbjct: 188 gaaaatcgatttatggatggaataaaatatgcagtatttacagacaaaagtattcggtta 247 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct: 248 ttggggaaaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaag 307 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 308 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccc 367 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| | || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 368 ggaaaggttaaaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 427 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 428 attacgcttcaaccgggttattctattccac 458 Score = 281 bits (142), Expect = 1e-72 Identities = 209/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 487 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 546 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||| | ||| | Sbjct: 547 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatgggcagcatca 606 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| Sbjct: 607 ttgtggtaaaggtcgtaatgccagaggaatcattaccgtaaggcataga-gggggaggtc 665 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 666 ataagcgtctataccgtaaaatagattttcgacgaaatacaaaagacata 715
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 154755 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 154814 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 154815 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 154874 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 154875 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 154934 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 154935 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 154994 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 154995 attacgcttcaaccgggttattctattccac 155025 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 88802 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 88743 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 88742 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 88683 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 88682 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 88623 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 88622 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 88563 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 88562 attacgcttcaaccgggttattctattccac 88532 Score = 305 bits (154), Expect = 8e-80 Identities = 212/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 155054 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 155113 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 ||||||||| || ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 155114 aaccgtagatagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 155173 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 155174 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 155232 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 155233 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 155282 Score = 305 bits (154), Expect = 8e-80 Identities = 212/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 88503 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 88444 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 ||||||||| || ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 88443 aaccgtagatagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 88384 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 88383 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 88325 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 88324 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 88275
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 339 bits (171), Expect = 6e-90 Identities = 187/191 (97%), Gaps = 1/191 (0%) Strand = Plus / Minus Query: 381 tatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacgaaataa 440 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 17518 tatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacgaaataa 17459 Query: 441 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17458 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 17399 Query: 501 aaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacggaatc 560 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 17398 aaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatc 17340 Query: 561 aaaaagacata 571 ||||||||||| Sbjct: 17339 aaaaagacata 17329
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 339 bits (171), Expect = 6e-90 Identities = 187/191 (97%), Gaps = 1/191 (0%) Strand = Plus / Minus Query: 381 tatcccgagcacacgcaagggaaccgtagacaggcaagtgaaatccaatccacgaaataa 440 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 136911 tatcccgagcacacgcaagggaaccatagataggcaagtgaaatccaatccacgaaataa 136852 Query: 441 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136851 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 136792 Query: 501 aaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacggaatc 560 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 136791 aaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatc 136733 Query: 561 aaaaagacata 571 ||||||||||| Sbjct: 136732 aaaaagacata 136722
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 339 bits (171), Expect = 6e-90 Identities = 240/263 (91%) Strand = Plus / Plus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| || Sbjct: 153675 atttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattggggaa 153734 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 153735 aaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgggt 153794 Query: 171 cgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaagg 230 |||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| || Sbjct: 153795 cgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccgggaaaggg 153854 Query: 231 tagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccct 290 ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| || Sbjct: 153855 tagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgct 153914 Query: 291 tcaaccgggttattctattccac 313 ||||||||||||||||||||||| Sbjct: 153915 tcaaccgggttattctattccac 153937 Score = 339 bits (171), Expect = 6e-90 Identities = 240/263 (91%) Strand = Plus / Minus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| || Sbjct: 88732 atttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattggggaa 88673 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 88672 aaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgggt 88613 Query: 171 cgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaagg 230 |||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| || Sbjct: 88612 cgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccgggaaaggg 88553 Query: 231 tagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccct 290 ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| || Sbjct: 88552 tagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgct 88493 Query: 291 tcaaccgggttattctattccac 313 ||||||||||||||||||||||| Sbjct: 88492 tcaaccgggttattctattccac 88470 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 153966 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 154025 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 154026 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 154085 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 154086 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 154144 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 154145 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 154194 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 88441 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 88382 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 88381 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 88322 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 88321 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 88263 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 88262 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 88213
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 154083 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 154142 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 154143 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 154202 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 154203 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 154262 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 154263 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 154322 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 154323 attacgcttcaaccgggttattctattccac 154353 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 88543 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 88484 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 88483 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 88424 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 88423 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 88364 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 88363 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 88304 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 88303 attacgcttcaaccgggttattctattccac 88273 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 154382 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 154441 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 154442 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 154501 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 154502 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 154560 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 154561 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 154610 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 88244 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 88185 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 88184 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 88125 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 88124 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 88066 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 88065 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 88016
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 153802 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 153861 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 153862 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 153921 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 153922 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 153981 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 153982 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 154041 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 154042 attacgcttcaaccgggttattctattccac 154072 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 88336 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 88277 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 88276 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 88217 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 88216 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 88157 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 88156 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 88097 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 88096 attacgcttcaaccgggttattctattccac 88066 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 154101 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 154160 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 154161 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 154220 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 154221 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 154279 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 154280 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 154329 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 88037 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 87978 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 87977 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 87918 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 87917 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 87859 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 87858 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 87809
>emb|X66414.1|ATTRIL A.thaliana chloroplast DNA for transfer RNA-Ile and ribosomal protein 23 Length = 1495 Score = 339 bits (171), Expect = 6e-90 Identities = 246/271 (90%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 239 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 298 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct: 299 ttggggaaaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaag 358 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| | ||| ||||| ||||||| |||||||| || Sbjct: 359 cattgggtcgaactcttctttggtgtcatggtaatagctatgaatagtcatcgactcccc 418 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| | || |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 419 ggaaaggttaaaagaatgggacctattctgggacatacaatgcattacagacgtatgatc 478 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 479 attacgcttcaaccgggttattctattccac 509 Score = 274 bits (138), Expect = 3e-70 Identities = 208/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 538 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 597 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 598 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctgtgggcagcatca 657 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| Sbjct: 658 ttgtggtaaaggtcgtaatgccagaggaataattaccgcaaggcataga-gggggaggtc 716 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 717 ataagcgtctataccgtaaaatagattttcgacgaaatgcaaaagacata 766
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 153367 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 153426 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 153427 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 153486 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 153487 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 153546 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 153547 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 153606 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 153607 ttcaaccgggttattctattccac 153630 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 87669 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 87610 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 87609 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 87550 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 87549 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 87490 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 87489 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 87430 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 87429 ttcaaccgggttattctattccac 87406 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 153659 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 153718 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 153719 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 153778 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 153779 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 153837 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 153838 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 153887 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 87377 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 87318 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 87317 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 87258 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 87257 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 87199 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 87198 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 87149
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 153510 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 153569 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 153570 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 153629 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 153630 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 153689 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 153690 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 153749 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 153750 ttcaaccgggttattctattccac 153773 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 87833 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 87774 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 87773 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 87714 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 87713 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 87654 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 87653 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 87594 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 87593 ttcaaccgggttattctattccac 87570 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 153802 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 153861 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 153862 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 153921 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 153922 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 153980 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 153981 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 154030 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 87541 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 87482 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 87481 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 87422 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 87421 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 87363 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 87362 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 87313
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 153508 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 153567 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 153568 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 153627 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 153628 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 153687 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 153688 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 153747 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 153748 ttcaaccgggttattctattccac 153771 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 87830 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 87771 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 87770 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 87711 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 87710 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 87651 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 87650 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 87591 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 87590 ttcaaccgggttattctattccac 87567 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 153800 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 153859 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 153860 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 153919 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 153920 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 153978 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 153979 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 154028 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 87538 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 87479 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 87478 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 87419 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 87418 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 87360 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 87359 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 87310
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 153412 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 153471 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 153472 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 153531 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 153532 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 153591 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 153592 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 153651 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 153652 ttcaaccgggttattctattccac 153675 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 87716 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 87657 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 87656 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 87597 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 87596 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 87537 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 87536 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 87477 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 87476 ttcaaccgggttattctattccac 87453 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 153704 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 153763 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 153764 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 153823 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 153824 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 153882 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 153883 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 153932 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 87424 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 87365 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 87364 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 87305 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 87304 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 87246 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 87245 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 87196
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 153381 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 153440 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 153441 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 153500 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 153501 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 153560 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 153561 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 153620 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 153621 ttcaaccgggttattctattccac 153644 Score = 333 bits (168), Expect = 4e-88 Identities = 240/264 (90%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 87681 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattgggga 87622 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 87621 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 87562 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| Sbjct: 87561 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaga 87502 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 87501 gtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatcattacgc 87442 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 87441 ttcaaccgggttattctattccac 87418 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 153673 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 153732 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 153733 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 153792 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 153793 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 153851 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 153852 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 153901 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 87389 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 87330 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 87329 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 87270 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 87269 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 87211 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 87210 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 87161
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| ||| || |||| ||| Sbjct: 161961 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaggtgttcggtta 162020 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 162021 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 162080 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| |||| ||||||| |||||||| || Sbjct: 162081 cattgggtcgaactcttctttggtgtcaaggtacaagctatgaatagtcatcgactcccg 162140 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 162141 ggaaagggtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 162200 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 162201 attacgcttcaaccgggttattctattccac 162231 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| ||| || |||| ||| Sbjct: 91367 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaggtgttcggtta 91308 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 91307 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 91248 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| |||| ||||||| |||||||| || Sbjct: 91247 cattgggtcgaactcttctttggtgtcaaggtacaagctatgaatagtcatcgactcccg 91188 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 91187 ggaaagggtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 91128 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 91127 attacgcttcaaccgggttattctattccac 91097 Score = 252 bits (127), Expect = 1e-63 Identities = 197/219 (89%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 353 atatggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagaca 412 ||||||||| |||||||||||||| ||| ||||||||||||||| ||| ||||||||| Sbjct: 162271 atatggcgatgcatttatacaaaacttctaccccgagcacacgcaatggagccgtagaca 162330 Query: 413 ggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaag 472 | ||||||||||||||| ||||||| ||||||||| |||||| || |||||| |||||| Sbjct: 162331 gtcaagtgaaatccaatacacgaaaaaatttgatctatggacagcctcgttgtagtaaag 162390 Query: 473 gtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgccta 532 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 162391 gtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtcataagcgtcta 162449 Query: 533 taccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||||| ||||||||||||||| ||| ||||||| Sbjct: 162450 taccgtaaaatcgattttcgacggaatgaaagagacata 162488 Score = 252 bits (127), Expect = 1e-63 Identities = 197/219 (89%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 353 atatggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagaca 412 ||||||||| |||||||||||||| ||| ||||||||||||||| ||| ||||||||| Sbjct: 91057 atatggcgatgcatttatacaaaacttctaccccgagcacacgcaatggagccgtagaca 90998 Query: 413 ggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaag 472 | ||||||||||||||| ||||||| ||||||||| |||||| || |||||| |||||| Sbjct: 90997 gtcaagtgaaatccaatacacgaaaaaatttgatctatggacagcctcgttgtagtaaag 90938 Query: 473 gtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgccta 532 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 90937 gtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtcataagcgtcta 90879 Query: 533 taccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||||| ||||||||||||||| ||| ||||||| Sbjct: 90878 taccgtaaaatcgattttcgacggaatgaaagagacata 90840
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 154418 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 154477 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 154478 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 154537 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 154538 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 154597 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 |||| ||||||||||| ||||||||| |||| || |||||||||||||||||||||||| Sbjct: 154598 ggaaggggtagaagaatgggacctattatgggacagacaatgcattacagacgtatgatc 154657 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 154658 attacgcttcaaccgggttattctattccac 154688 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 88007 gaaaatcgatttatggatggaatcaaatatgcagtatttacagacaaaagtattcggtta 87948 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||||||| Sbjct: 87947 ttggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaag 87888 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 87887 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 87828 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 |||| ||||||||||| ||||||||| |||| || |||||||||||||||||||||||| Sbjct: 87827 ggaaggggtagaagaatgggacctattatgggacagacaatgcattacagacgtatgatc 87768 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 87767 attacgcttcaaccgggttattctattccac 87737 Score = 289 bits (146), Expect = 5e-75 Identities = 210/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| | Sbjct: 154717 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatcg 154776 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 154777 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 154836 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 154837 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 154895 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 154896 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 154945 Score = 289 bits (146), Expect = 5e-75 Identities = 210/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| | Sbjct: 87708 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatcg 87649 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 87648 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 87589 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 87588 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 87530 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 87529 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 87480
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 323 bits (163), Expect = 4e-85 Identities = 244/271 (90%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| ||||||||| |||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 18804 gaaaatcgatttatagatggaatcaaatatgcagtatttacagacaaaagtattcggtta 18745 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| |||||||||||| | || |||| ||||||||||||| Sbjct: 18744 ttggggaaaaatcaatatacttctaatgtcgaatcagaatcaactaggacagaaataaag 18685 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 18684 cattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccg 18625 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 ||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 18624 ggaaagagtagaagaatgggacctattatgggacatacaatgcattacagacgtatgatc 18565 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 18564 attacgcttcaaccgggttattctattccac 18534 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 18505 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 18446 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 18445 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 18386 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 18385 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 18327 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 18326 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 18277
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 321 bits (162), Expect = 1e-84 Identities = 272/309 (88%), Gaps = 6/309 (1%) Strand = Plus / Plus Query: 5 gaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaa 64 ||||||||||||||||||||||||| |||| |||| | ||||||||||||||| Sbjct: 151956 gaattcttatcgatactggaactca------tagggaagaaaatggatttatggatggaa 152009 Query: 65 tcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatactt 124 ||||||| ||||||||||| ||||||||| |||| |||||||| || ||||||||||||| Sbjct: 152010 tcaaatatgcagtatttaccgaaaaaagtattcggttattggggaacaatcaatatactt 152069 Query: 125 ttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttg 184 |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 152070 ctaatgtcgaatcaggatcaactaggacagaaataaagcattgggtcgaactcttctttg 152129 Query: 185 gtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaataggac 244 | || ||||| ||||| ||||||| |||||||| || ||||| ||||||||| | |||| Sbjct: 152130 gcgtcaaggtaatagctatgaatagtcatcgactcccgggaaagggtagaagagtgggac 152189 Query: 245 ctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttatt 304 ||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 152190 ctattaagggacatacaatgcattacagacgtatgatcattacgcttcaaccgggttatt 152249 Query: 305 ctattccac 313 ||||||||| Sbjct: 152250 ctattccac 152258 Score = 321 bits (162), Expect = 1e-84 Identities = 272/309 (88%), Gaps = 6/309 (1%) Strand = Plus / Minus Query: 5 gaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaa 64 ||||||||||||||||||||||||| |||| |||| | ||||||||||||||| Sbjct: 86015 gaattcttatcgatactggaactca------tagggaagaaaatggatttatggatggaa 85962 Query: 65 tcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatactt 124 ||||||| ||||||||||| ||||||||| |||| |||||||| || ||||||||||||| Sbjct: 85961 tcaaatatgcagtatttaccgaaaaaagtattcggttattggggaacaatcaatatactt 85902 Query: 125 ttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttg 184 |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 85901 ctaatgtcgaatcaggatcaactaggacagaaataaagcattgggtcgaactcttctttg 85842 Query: 185 gtgttaaggtggtagctgtgaatagccatcgactacctggaaaaggtagaagaataggac 244 | || ||||| ||||| ||||||| |||||||| || ||||| ||||||||| | |||| Sbjct: 85841 gcgtcaaggtaatagctatgaatagtcatcgactcccgggaaagggtagaagagtgggac 85782 Query: 245 ctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttatt 304 ||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 85781 ctattaagggacatacaatgcattacagacgtatgatcattacgcttcaaccgggttatt 85722 Query: 305 ctattccac 313 ||||||||| Sbjct: 85721 ctattccac 85713 Score = 289 bits (146), Expect = 5e-75 Identities = 210/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 |||||||||||| | ||||| ||||||||||||||| ||| | ||||||||||||| || Sbjct: 152287 aatacttaataacacggcgatacatttatacaaaacttctacctcgagcacacgcaatgg 152346 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 152347 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 152406 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 152407 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 152465 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 152466 ataagcgtctataccgtaaaatcgattttcgacggaataaaaaagacata 152515 Score = 289 bits (146), Expect = 5e-75 Identities = 210/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 |||||||||||| | ||||| ||||||||||||||| ||| | ||||||||||||| || Sbjct: 85684 aatacttaataacacggcgatacatttatacaaaacttctacctcgagcacacgcaatgg 85625 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 85624 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 85565 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 85564 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 85506 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 85505 ataagcgtctataccgtaaaatcgattttcgacggaataaaaaagacata 85456
>gb|AF301604.1| Daucus carota ATP1 (atp1) gene, atp1-N1 allele, complete cds; mitochondrial gene for mitochondrial product Length = 6594 Score = 317 bits (160), Expect = 2e-83 Identities = 239/264 (90%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||| || Sbjct: 5715 atttatggatggaatcaaatatgcagtatttacagacaaaagtattcggttattggggaa 5774 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 5775 aaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgggt 5834 Query: 171 cgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaagg 230 |||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| || Sbjct: 5835 cgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgacttccgggaaaggg 5894 Query: 231 tagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccct 290 ||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||| || Sbjct: 5895 tagaagaatgggacctattatgggacagacaatgcattacagacgtatgatcattacgct 5954 Query: 291 tc-aaccgggttattctattccac 313 || ||||||||||||||||||||| Sbjct: 5955 tcaaaccgggttattctattccac 5978 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| | Sbjct: 6007 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatcg 6066 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| | ||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 6067 aaccgtagacagtcgagtgaaatccaatccacgaaataatttgatctatggacagcatcg 6126 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 |||||| |||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 6127 ttgtgggaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 6185 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6186 ataagcgtctataccgtaaaatagattttcgacggaatgaaaaagacata 6235
>gb|AY479980.1| Capsicum annuum rpL2 mRNA, partial sequence Length = 736 Score = 313 bits (158), Expect = 3e-82 Identities = 213/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 26 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 85 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 86 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 145 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 146 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 204 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 205 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 254
>gb|AY836177.1| Crithopsis delileana ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; rbcL-psaI intergenic spacer, complete sequence; and photosystem I subunit VIII (psaI) gene, partial cds; chloroplast Length = 2752 Score = 311 bits (157), Expect = 1e-81 Identities = 157/157 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1777 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 1836 Query: 119 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1837 atacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactct 1896 Query: 179 tctttggtgttaaggtggtagctgtgaatagccatcg 215 ||||||||||||||||||||||||||||||||||||| Sbjct: 1897 tctttggtgttaaggtggtagctgtgaatagccatcg 1933
>gb|AF536226.1| Vigna angularis chloroplast S10A operon, partial sequence Length = 6285 Score = 309 bits (156), Expect = 5e-81 Identities = 237/264 (89%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||| ||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 471 gatttatgaatggaataaaatatgcagtatttacagacaaaagtattcggttattgggga 530 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 531 aaaatcaatatacttttaatgtcgaatcgggatcaactaggacagaaataaagcattggg 590 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||| ||| || || ||||| ||||||| |||||||| || | ||| | Sbjct: 591 tcgaactcttctttgatgtcaaagtaatagctatgaatagtcatcgactcccggtaaagg 650 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||| || |||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 651 gtagaagagtacgacctattatgggacatacaatgcattacagacgtatgatcattacgc 710 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 711 ttcaaccgggttattctattccac 734 Score = 244 bits (123), Expect = 3e-61 Identities = 207/233 (88%), Gaps = 4/233 (1%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||||| || Sbjct: 763 aatacttaatagcatggcgatacatttatacaaaacttctaccccaagcacacgcaatgg 822 Query: 402 aaccgtagacaggc---aagtgaaatccaatccacgaaataatttgatccatggacggca 458 |||||||||||| | |||| |||||||||||||||||| |||||||| |||||| ||| Sbjct: 823 aaccgtagacagtcgtcaagtaaaatccaatccacgaaatcatttgatctatggacagca 882 Query: 459 ccgttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggag 518 ||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| Sbjct: 883 tcgttgtggtaaaggtcgtaatgccagaggaataattaccgcagggcataga-gggggag 941 Query: 519 gtcataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 |||||||||| ||||||||| |||| ||||||||||||||| ||||| ||||| Sbjct: 942 gtcataagcgtctataccgtcaaattgattttcgacggaatgaaaaaaacata 994
>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence Length = 6550 Score = 309 bits (156), Expect = 5e-81 Identities = 237/264 (89%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||| ||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 471 gatttatgaatggaataaaatatgcagtatttacagacaaaagtattcggttattgggga 530 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 531 aaaatcaatatacttttaatgtcgaatcgggatcaactaggacagaaataaagcattggg 590 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||| ||| || || ||||| ||||||| |||||||| || | ||| | Sbjct: 591 tcgaactcttctttgatgtcaaagtaatagctatgaatagtcatcgactcccggtaaagg 650 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||| || |||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 651 gtagaagagtacgacctattatgggacatacaatgcattacagacgtatgatcattacgc 710 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 711 ttcaaccgggttattctattccac 734 Score = 244 bits (123), Expect = 3e-61 Identities = 207/233 (88%), Gaps = 4/233 (1%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||||| || Sbjct: 763 aatacttaatagcatggcgatacatttatacaaaacttctaccccaagcacacgcaatgg 822 Query: 402 aaccgtagacaggc---aagtgaaatccaatccacgaaataatttgatccatggacggca 458 |||||||||||| | |||| |||||||||||||||||| |||||||| |||||| ||| Sbjct: 823 aaccgtagacagtcgtcaagtaaaatccaatccacgaaatcatttgatctatggacagca 882 Query: 459 ccgttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggag 518 ||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| Sbjct: 883 tcgttgtggtaaaggtcgtaatgccagaggaataattaccgcagggcataga-gggggag 941 Query: 519 gtcataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 |||||||||| ||||||||| |||| ||||||||||||||| ||||| ||||| Sbjct: 942 gtcataagcgtctataccgtcaaattgattttcgacggaatgaaaaaaacata 994
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 307 bits (155), Expect = 2e-80 Identities = 236/263 (89%) Strand = Plus / Plus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||||||||| | |||| ||||||| |||||| |||| ||||||| || Sbjct: 158413 atttatggatggaatcaaatatgtagtagttacagacaaaagtattcggttattggtgaa 158472 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 158473 aaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgggt 158532 Query: 171 cgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaagg 230 |||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| || Sbjct: 158533 cgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactccccggaaaggg 158592 Query: 231 tagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccct 290 ||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||| || Sbjct: 158593 tagaagaatgggacctattatgggacatacaatgcattacaggcgtatgatcattacgct 158652 Query: 291 tcaaccgggttattctattccac 313 ||||||||||||||||||||||| Sbjct: 158653 tcaaccgggttattctattccac 158675 Score = 307 bits (155), Expect = 2e-80 Identities = 236/263 (89%) Strand = Plus / Minus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||||||||| | |||| ||||||| |||||| |||| ||||||| || Sbjct: 90684 atttatggatggaatcaaatatgtagtagttacagacaaaagtattcggttattggtgaa 90625 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 90624 aaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattgggt 90565 Query: 171 cgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaagg 230 |||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| || Sbjct: 90564 cgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactccccggaaaggg 90505 Query: 231 tagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccct 290 ||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||| || Sbjct: 90504 tagaagaatgggacctattatgggacatacaatgcattacaggcgtatgatcattacgct 90445 Query: 291 tcaaccgggttattctattccac 313 ||||||||||||||||||||||| Sbjct: 90444 tcaaccgggttattctattccac 90422 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| |||| |||||||||| || Sbjct: 158704 aatacttaatagcatggcgatacatttatacaaaacttctaccccgggcacacgcaatgg 158763 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 158764 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatcg 158823 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 158824 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 158882 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 158883 ataagcgtctataccgtaaaattgattttcgacgaaatgaaaaagacata 158932 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| |||| |||||||||| || Sbjct: 90393 aatacttaatagcatggcgatacatttatacaaaacttctaccccgggcacacgcaatgg 90334 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 90333 agccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatcg 90274 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 90273 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 90215 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 90214 ataagcgtctataccgtaaaattgattttcgacgaaatgaaaaagacata 90165
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 305 bits (154), Expect = 8e-80 Identities = 212/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| | ||||||||||||| ||| ||||||||||||||| || Sbjct: 149448 aatacttaatagcatggcgataaatttatacaaaacttctaccccgagcacacgcaatgg 149507 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 149508 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 149567 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 149568 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 149626 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 149627 ataagcgtctataccgtaaaatagattttcgacggaatgaaaaagacata 149676 Score = 305 bits (154), Expect = 8e-80 Identities = 212/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| | ||||||||||||| ||| ||||||||||||||| || Sbjct: 85187 aatacttaatagcatggcgataaatttatacaaaacttctaccccgagcacacgcaatgg 85128 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 85127 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 85068 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 85067 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 85009 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 85008 ataagcgtctataccgtaaaatagattttcgacggaatgaaaaagacata 84959 Score = 281 bits (142), Expect = 1e-72 Identities = 235/266 (88%) Strand = Plus / Plus Query: 48 tcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattggg 107 |||||||||||||||||||| || |||||||||||||| |||||| |||| |||||||| Sbjct: 149154 tcgatttatggatggaatcaggtatgcagtatttacagacaaaagtattcggttattggg 149213 Query: 108 aaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattg 167 || ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||| Sbjct: 149214 gaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattg 149273 Query: 168 ggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaa 227 ||||||||||||||||||||| ||||| | || ||||||| |||||||| | ||||| Sbjct: 149274 ggtcgaactcttctttggtgtcaaggtaatcgcgatgaatagtcatcgacttcggggaaa 149333 Query: 228 aggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattac 287 | ||||||||| ||||| ||| |||| || ||||||||||||||||||||||||||||| Sbjct: 149334 ggctagaagaatgggacccattatgggacagacaatgcattacagacgtatgatcattac 149393 Query: 288 ccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||| Sbjct: 149394 gcttcaaccgggttattctattccac 149419 Score = 281 bits (142), Expect = 1e-72 Identities = 235/266 (88%) Strand = Plus / Minus Query: 48 tcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattggg 107 |||||||||||||||||||| || |||||||||||||| |||||| |||| |||||||| Sbjct: 85481 tcgatttatggatggaatcaggtatgcagtatttacagacaaaagtattcggttattggg 85422 Query: 108 aaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattg 167 || ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||| Sbjct: 85421 gaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattg 85362 Query: 168 ggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaa 227 ||||||||||||||||||||| ||||| | || ||||||| |||||||| | ||||| Sbjct: 85361 ggtcgaactcttctttggtgtcaaggtaatcgcgatgaatagtcatcgacttcggggaaa 85302 Query: 228 aggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattac 287 | ||||||||| ||||| ||| |||| || ||||||||||||||||||||||||||||| Sbjct: 85301 ggctagaagaatgggacccattatgggacagacaatgcattacagacgtatgatcattac 85242 Query: 288 ccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||| Sbjct: 85241 gcttcaaccgggttattctattccac 85216
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 305 bits (154), Expect = 8e-80 Identities = 212/230 (92%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 |||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 27988 aatacttaataacatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 27929 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | ||||||||| ||||||||||||||||||||||||||||||||| |||||| || || Sbjct: 27928 agccgtagacaatcaagtgaaatccaatccacgaaataatttgatctatggacagcgtcg 27869 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 27868 ttgtggtaaaggccgtaatgccagaggaatcattaccgcaaggcatag-ggggggaggtc 27810 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 27809 ataagcgtctataccgtaaaatagattttcgacggaatgaaaaagacata 27760 Score = 252 bits (127), Expect = 1e-63 Identities = 229/263 (87%) Strand = Plus / Minus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||||||||| ||||||||||| || |||||| |||| |||||||| || Sbjct: 28279 atttatggatggaatcaaataggcagtatttacggacaaaagtattcggttattggggaa 28220 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 || |||||||||| ||||||||||| | || |||| ||| ||||||||| ||||||| Sbjct: 28219 aaagcaatatacttctaatgtcgaattcgaatcaactaggacggaaataaagtattgggt 28160 Query: 171 cgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaagg 230 |||||||||||||||||| ||||| ||| | ||||||| |||||||| | |||| || Sbjct: 28159 cgaactcttctttggtgtcaaggtaatagttatgaatagtcatcgactcctccgaaaggg 28100 Query: 231 tagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccct 290 ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| || Sbjct: 28099 tagaagaatgggacctattatggaacatacaatgcattacagacgtatgatcattacgct 28040 Query: 291 tcaaccgggttattctattccac 313 |||| |||||||||||||||||| Sbjct: 28039 tcaatcgggttattctattccac 28017
>gb|AY029519.1| Populus deltoides ribosomal protein L2 gene, partial cds; chloroplast gene for chloroplast product Length = 1213 Score = 301 bits (152), Expect = 1e-78 Identities = 236/264 (89%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||| ||||||| |||||| |||| |||||| | Sbjct: 192 gatttatggatggaatcaaatatgcagtagttacagacaaaagtattcggttattgttga 251 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 252 aaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 311 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| |||||||||||||||| || ||||| | Sbjct: 312 tcgaactcttctttggtgtcaaggtaatagctatgaatagccatcgactcccgggaaagg 371 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| |||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 372 gtagaagaatgagacctattatgggacatacaatgcattacagacgtatgatcattacgc 431 Query: 290 ttcaaccgggttattctattccac 313 ||| ||||||||||||||||||| Sbjct: 432 ttcttccgggttattctattccac 455 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 484 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 543 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 544 aaccgtagacagtcaagtgaaatccaatccacgaaataatttgatctatggacagcatca 603 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcataga-gggggaggtg 662 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 |||| || |||||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 663 ataaacgtctataccgtaaaatcgattttcgacggaatgaaaaatacata 712
>gb|DQ069414.1| Yucca schidigera ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 822 Score = 299 bits (151), Expect = 5e-78 Identities = 200/215 (93%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 357 ggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggca 416 ||||| ||||||||||||||| ||| ||||||||||||||| ||| |||||||||| || Sbjct: 3 ggcgatacatttatacaaaacttctaccccgagcacacgcaatggagccgtagacagtca 62 Query: 417 agtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcg 476 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 63 agtgaaatccaatccacgaaataatttgatctatggacagcatcgttgtggtaaaggtcg 122 Query: 477 taattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctatacc 536 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 123 taatgccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgtctatacc 181 Query: 537 gtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| ||||||||||||||| ||||||||||| Sbjct: 182 gtaaaatcgattttcgacggaatgaaaaagacata 216
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 299 bits (151), Expect = 5e-78 Identities = 241/271 (88%) Strand = Plus / Plus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||| ||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 148637 gaaaatcgatttatgaatggaatcaaatatgcagtatttacagacaaaagtattcggtta 148696 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 148697 ttggggaaaaatcaatatacttctaatgtcgaatcgggatcaactaggacagaaataaag 148756 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| |||| ||||||| |||||||| || Sbjct: 148757 cattgggtcgaactcttctttggtgtcaaggtaaaagctatgaatagtcatcgactcccg 148816 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 | ||| ||||||| | | ||| |||| |||| ||||||||||||||||||||||||||| Sbjct: 148817 gcaaagggtagaaaagtgcgacttattatgggacatacaatgcattacagacgtatgatc 148876 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 148877 attacgcttcaaccgggttattctattccac 148907 Score = 299 bits (151), Expect = 5e-78 Identities = 241/271 (88%) Strand = Plus / Minus Query: 43 gaaagtcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgttta 102 |||| |||||||||| ||||||||||||| |||||||||||||| |||||| |||| ||| Sbjct: 83819 gaaaatcgatttatgaatggaatcaaatatgcagtatttacagacaaaagtattcggtta 83760 Query: 103 ttgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaag 162 ||||| || ||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 83759 ttggggaaaaatcaatatacttctaatgtcgaatcgggatcaactaggacagaaataaag 83700 Query: 163 cattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacct 222 |||||||||||||||||||||||||| ||||| |||| ||||||| |||||||| || Sbjct: 83699 cattgggtcgaactcttctttggtgtcaaggtaaaagctatgaatagtcatcgactcccg 83640 Query: 223 ggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatc 282 | ||| ||||||| | | ||| |||| |||| ||||||||||||||||||||||||||| Sbjct: 83639 gcaaagggtagaaaagtgcgacttattatgggacatacaatgcattacagacgtatgatc 83580 Query: 283 attacccttcaaccgggttattctattccac 313 ||||| ||||||||||||||||||||||||| Sbjct: 83579 attacgcttcaaccgggttattctattccac 83549 Score = 234 bits (118), Expect = 3e-58 Identities = 203/230 (88%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| | Sbjct: 148936 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatcg 148995 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| |||||||||||||||||||||||| ||||||| |||||| || | Sbjct: 148996 agccgtagacagtcaagtgaaatccaatccacgaaatcgtttgatctatggactacattg 149055 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 |||| ||||||| |||||| |||||||||||||||||||| ||||||| |||||| |||| Sbjct: 149056 ttgtagtaaaggccgtaatgccagaggaatcattaccgcagggcatag-gggggggggtc 149114 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 149115 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaaaacata 149164 Score = 234 bits (118), Expect = 3e-58 Identities = 203/230 (88%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| | Sbjct: 83520 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatcg 83461 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| |||||||||||||||||||||||| ||||||| |||||| || | Sbjct: 83460 agccgtagacagtcaagtgaaatccaatccacgaaatcgtttgatctatggactacattg 83401 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 |||| ||||||| |||||| |||||||||||||||||||| ||||||| |||||| |||| Sbjct: 83400 ttgtagtaaaggccgtaatgccagaggaatcattaccgcagggcatag-gggggggggtc 83342 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 83341 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaaaacata 83292
>gb|AY173937.1| Cucumis sativus ribosomal protein L2-like protein (rpl2) gene, partial chloroplast sequence Length = 721 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 265 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 324 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 325 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 384 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 385 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 443 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 444 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 493 Score = 276 bits (139), Expect = 8e-71 Identities = 196/215 (91%) Strand = Plus / Plus Query: 99 tttattgggaaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaat 158 ||||||||| || ||||||||||||| |||||||||||| |||| |||| ||||||||| Sbjct: 22 tttattggggaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaat 81 Query: 159 aaagcattgggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgact 218 |||||||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||| Sbjct: 82 aaagcattgggtcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgact 141 Query: 219 acctggaaaaggtagaagaataggacctattctgggccatacaatgcattacagacgtat 278 || ||||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||| Sbjct: 142 cccgggaaagggtagaagaatgggacctattatgggacatacaatgcattacagacgtat 201 Query: 279 gatcattacccttcaaccgggttattctattccac 313 ||||||||| ||||||||||||||||||||||||| Sbjct: 202 gatcattacgcttcaaccgggttattctattccac 236
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 151153 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 151212 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| |||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 151213 agccgtagacagtaaagtgaaatccaatccacgaaataatttgatctatggacagcatca 151272 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 151273 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 151331 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 151332 ataagcgtctataccgtaaaatagattttcgacggaatgaaaaagacata 151381 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 85725 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 85666 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| |||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 85665 agccgtagacagtaaagtgaaatccaatccacgaaataatttgatctatggacagcatca 85606 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 85605 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 85547 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 85546 ataagcgtctataccgtaaaatagattttcgacggaatgaaaaagacata 85497 Score = 274 bits (138), Expect = 3e-70 Identities = 234/266 (87%) Strand = Plus / Plus Query: 48 tcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattggg 107 |||||||||||||||||||| || |||||||||||||| |||||| ||| |||||||| Sbjct: 150859 tcgatttatggatggaatcaggtatgcagtatttacagacaaaagtattcagttattggg 150918 Query: 108 aaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattg 167 || ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||| Sbjct: 150919 gaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattg 150978 Query: 168 ggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaa 227 ||||||||||||||||||||| ||||| | || ||||||| |||||||| | ||||| Sbjct: 150979 ggtcgaactcttctttggtgtcaaggtaatcgcgatgaatagtcatcgacttcggggaaa 151038 Query: 228 aggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattac 287 | ||||||||| ||||| ||| |||| || ||||||||||||||||||||||||||||| Sbjct: 151039 ggctagaagaatgggacccattatgggacagacaatgcattacagacgtatgatcattac 151098 Query: 288 ccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||| Sbjct: 151099 gcttcaaccgggttattctattccac 151124 Score = 274 bits (138), Expect = 3e-70 Identities = 234/266 (87%) Strand = Plus / Minus Query: 48 tcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattggg 107 |||||||||||||||||||| || |||||||||||||| |||||| ||| |||||||| Sbjct: 86019 tcgatttatggatggaatcaggtatgcagtatttacagacaaaagtattcagttattggg 85960 Query: 108 aaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattg 167 || ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||| Sbjct: 85959 gaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattg 85900 Query: 168 ggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaa 227 ||||||||||||||||||||| ||||| | || ||||||| |||||||| | ||||| Sbjct: 85899 ggtcgaactcttctttggtgtcaaggtaatcgcgatgaatagtcatcgacttcggggaaa 85840 Query: 228 aggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattac 287 | ||||||||| ||||| ||| |||| || ||||||||||||||||||||||||||||| Sbjct: 85839 ggctagaagaatgggacccattatgggacagacaatgcattacagacgtatgatcattac 85780 Query: 288 ccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||| Sbjct: 85779 gcttcaaccgggttattctattccac 85754
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 |||||||||||| | ||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 161187 aatacttaataacacggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 161246 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||| || Sbjct: 161247 agccgtagacagtcaagtgaaatccaatccacgaaagaatttgatctatggacagcatcg 161306 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct: 161307 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcatagagggggg-ggtc 161365 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 161366 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 161415 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 |||||||||||| | ||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 92470 aatacttaataacacggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 92411 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||| || Sbjct: 92410 agccgtagacagtcaagtgaaatccaatccacgaaagaatttgatctatggacagcatcg 92351 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct: 92350 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcatagagggggg-ggtc 92292 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 92291 ataagcgtctataccgtaaaatcgattttcgacggaatgaaaaagacata 92242 Score = 287 bits (145), Expect = 2e-74 Identities = 272/315 (86%), Gaps = 12/315 (3%) Strand = Plus / Plus Query: 5 gaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaa 64 ||||||||||||||||||||||||| |||| |||| | ||||||||||||||| Sbjct: 160850 gaattcttatcgatactggaactca------tagggaagaaaatggatttatggatggaa 160903 Query: 65 tcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatactt 124 ||||||| ||||||||||||||||||||| |||| |||||||| || ||||||||||||| Sbjct: 160904 tcaaatatgcagtatttacagaaaaaagtattcggttattggggaacaatcaatatactt 160963 Query: 125 ttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttg 184 |||||||||||| |||| |||| | ||||||||||||||||| ||||||||||||||| Sbjct: 160964 ctaatgtcgaatcaggatcaactagggcagaaataaagcattggatcgaactcttctttg 161023 Query: 185 gtgttaaggtggtagctgtgaatagccatcgac------tacctggaaaaggtagaagaa 238 |||| ||||| ||||| ||||||| ||||||| | || ||||| |||||||||| Sbjct: 161024 gtgtcaaggtaatagctatgaatagtcatcgactcccggtcccgggaaagggtagaagaa 161083 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||| || |||| |||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 161084 tgggacctcttatgggacatagaatgcattacagacgtatgatcattacgcttcaaccgg 161143 Query: 299 gttattctattccac 313 ||||||||||||||| Sbjct: 161144 gttattctattccac 161158 Score = 287 bits (145), Expect = 2e-74 Identities = 272/315 (86%), Gaps = 12/315 (3%) Strand = Plus / Minus Query: 5 gaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaa 64 ||||||||||||||||||||||||| |||| |||| | ||||||||||||||| Sbjct: 92807 gaattcttatcgatactggaactca------tagggaagaaaatggatttatggatggaa 92754 Query: 65 tcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatactt 124 ||||||| ||||||||||||||||||||| |||| |||||||| || ||||||||||||| Sbjct: 92753 tcaaatatgcagtatttacagaaaaaagtattcggttattggggaacaatcaatatactt 92694 Query: 125 ttaatgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttg 184 |||||||||||| |||| |||| | ||||||||||||||||| ||||||||||||||| Sbjct: 92693 ctaatgtcgaatcaggatcaactagggcagaaataaagcattggatcgaactcttctttg 92634 Query: 185 gtgttaaggtggtagctgtgaatagccatcgac------tacctggaaaaggtagaagaa 238 |||| ||||| ||||| ||||||| ||||||| | || ||||| |||||||||| Sbjct: 92633 gtgtcaaggtaatagctatgaatagtcatcgactcccggtcccgggaaagggtagaagaa 92574 Query: 239 taggacctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgg 298 | |||||| || |||| |||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 92573 tgggacctcttatgggacatagaatgcattacagacgtatgatcattacgcttcaaccgg 92514 Query: 299 gttattctattccac 313 ||||||||||||||| Sbjct: 92513 gttattctattccac 92499
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 151146 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 151205 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| |||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 151206 agccgtagacagtaaagtgaaatccaatccacgaaataatttgatctatggacagcatca 151265 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 151266 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 151324 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 151325 ataagcgtctataccgtaaaatagattttcgacggaatgaaaaagacata 151374 Score = 297 bits (150), Expect = 2e-77 Identities = 211/230 (91%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 85723 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 85664 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| |||||||||||||||||||||||||||||||| |||||| ||| | Sbjct: 85663 agccgtagacagtaaagtgaaatccaatccacgaaataatttgatctatggacagcatca 85604 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 85603 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 85545 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 85544 ataagcgtctataccgtaaaatagattttcgacggaatgaaaaagacata 85495 Score = 274 bits (138), Expect = 3e-70 Identities = 234/266 (87%) Strand = Plus / Plus Query: 48 tcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattggg 107 |||||||||||||||||||| || |||||||||||||| |||||| ||| |||||||| Sbjct: 150852 tcgatttatggatggaatcaggtatgcagtatttacagacaaaagtattcagttattggg 150911 Query: 108 aaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattg 167 || ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||| Sbjct: 150912 gaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattg 150971 Query: 168 ggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaa 227 ||||||||||||||||||||| ||||| | || ||||||| |||||||| | ||||| Sbjct: 150972 ggtcgaactcttctttggtgtcaaggtaatcgcgatgaatagtcatcgacttcggggaaa 151031 Query: 228 aggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattac 287 | ||||||||| ||||| ||| |||| || ||||||||||||||||||||||||||||| Sbjct: 151032 ggctagaagaatgggacccattatgggacagacaatgcattacagacgtatgatcattac 151091 Query: 288 ccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||| Sbjct: 151092 gcttcaaccgggttattctattccac 151117 Score = 274 bits (138), Expect = 3e-70 Identities = 234/266 (87%) Strand = Plus / Minus Query: 48 tcgatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattggg 107 |||||||||||||||||||| || |||||||||||||| |||||| ||| |||||||| Sbjct: 86017 tcgatttatggatggaatcaggtatgcagtatttacagacaaaagtattcagttattggg 85958 Query: 108 aaagaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattg 167 || ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||| Sbjct: 85957 gaaaaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattg 85898 Query: 168 ggtcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaa 227 ||||||||||||||||||||| ||||| | || ||||||| |||||||| | ||||| Sbjct: 85897 ggtcgaactcttctttggtgtcaaggtaatcgcgatgaatagtcatcgacttcggggaaa 85838 Query: 228 aggtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattac 287 | ||||||||| ||||| ||| |||| || ||||||||||||||||||||||||||||| Sbjct: 85837 ggctagaagaatgggacccattatgggacagacaatgcattacagacgtatgatcattac 85778 Query: 288 ccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||| Sbjct: 85777 gcttcaaccgggttattctattccac 85752
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 293 bits (148), Expect = 3e-76 Identities = 235/264 (89%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||| ||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 150248 gatttatgaatggaataaaatatgcagtatttacagacaaaagtattcggttattgggga 150307 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 150308 aaaatcaatatacttttaatgtcgaatcgggatcaactaggacagaaatcaagcattggg 150367 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||| ||| || || ||||| ||||||| |||||||| || | ||| | Sbjct: 150368 tcgaactcttctttgatgtcaaagtaatagctatgaatagtcatcgactcccggtaaagg 150427 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||| || |||||||| |||| |||||||||||||||||||||||||| ||||| | Sbjct: 150428 gtagaagagtacgacctattatgggacatacaatgcattacagacgtatgattattacgc 150487 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 150488 ttcaaccgggttattctattccac 150511 Score = 293 bits (148), Expect = 3e-76 Identities = 235/264 (89%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||| ||||| |||||||||||||| |||||| |||| |||||||| | Sbjct: 85146 gatttatgaatggaataaaatatgcagtatttacagacaaaagtattcggttattgggga 85087 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 85086 aaaatcaatatacttttaatgtcgaatcgggatcaactaggacagaaatcaagcattggg 85027 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||| ||| || || ||||| ||||||| |||||||| || | ||| | Sbjct: 85026 tcgaactcttctttgatgtcaaagtaatagctatgaatagtcatcgactcccggtaaagg 84967 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||| || |||||||| |||| |||||||||||||||||||||||||| ||||| | Sbjct: 84966 gtagaagagtacgacctattatgggacatacaatgcattacagacgtatgattattacgc 84907 Query: 290 ttcaaccgggttattctattccac 313 |||||||||||||||||||||||| Sbjct: 84906 ttcaaccgggttattctattccac 84883 Score = 266 bits (134), Expect = 7e-68 Identities = 207/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||||| || Sbjct: 150540 aatacttaatagcatggcgatacatttatacaaaacttctaccccaagcacacgcaatgg 150599 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| |||||||||||||||||| |||||||| |||||| ||| || Sbjct: 150600 agccgtagacagtcaagtaaaatccaatccacgaaatcatttgatctatggacagcatcg 150659 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 |||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 150660 ttgtggtaaaggccgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 150718 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 150719 ataagcgtctataccgtaaaattgattttcgacggaatgaaaaaaacata 150768 Score = 266 bits (134), Expect = 7e-68 Identities = 207/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||||| || Sbjct: 84854 aatacttaatagcatggcgatacatttatacaaaacttctaccccaagcacacgcaatgg 84795 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| |||||||||||||||||| |||||||| |||||| ||| || Sbjct: 84794 agccgtagacagtcaagtaaaatccaatccacgaaatcatttgatctatggacagcatcg 84735 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 |||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 84734 ttgtggtaaaggccgtaatgccagaggaatcattaccgcagggcataga-gggggaggtc 84676 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| |||||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 84675 ataagcgtctataccgtaaaattgattttcgacggaatgaaaaaaacata 84626
>gb|DQ069413.1| Typha latifolia ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 822 Score = 291 bits (147), Expect = 1e-75 Identities = 199/215 (92%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 357 ggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggca 416 ||||| ||||||||||||||| ||| ||||||||||||||| ||| |||||||||| || Sbjct: 3 ggcgatacatttatacaaaacttctaccccgagcacacgcaatggagccgtagacagtca 62 Query: 417 agtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcg 476 ||||||||||||||||||||||||||||||| |||||||||| | |||| |||||||||| Sbjct: 63 agtgaaatccaatccacgaaataatttgatctatggacggcatcattgtagtaaaggtcg 122 Query: 477 taattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctatacc 536 |||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 123 taatgccagaggaatcattaccgcagggcataga-gggggaggtcataagcgtctatacc 181 Query: 537 gtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| ||||||||||||||||||||||||||| Sbjct: 182 gtaaaatcgattttcgacggaatcaaaaagacata 216
>gb|DQ069409.1| Acorus americanus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 816 Score = 274 bits (138), Expect = 3e-70 Identities = 196/214 (91%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 358 gcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaa 417 |||| ||||||||||||||| ||| | ||||||||||||| ||| |||||||||| ||| Sbjct: 1 gcgatacatttatacaaaacttctacctcgagcacacgcaatggagccgtagacagtcaa 60 Query: 418 gtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgt 477 |||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||||| Sbjct: 61 gtgaaatccaatccacgaaataatttgatctatggacagcatcattgtggtaaaggtcgt 120 Query: 478 aattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccg 537 ||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 121 aatgccagaggaatcattaccgcagggcataga-gggggaggtcataagcgtctataccg 179 Query: 538 taaaatagattttcgacggaatcaaaaagacata 571 |||||| ||||||||||||||| ||||||||||| Sbjct: 180 taaaatcgattttcgacggaataaaaaagacata 213
>gb|DQ069411.1| Nuphar advena ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 819 Score = 272 bits (137), Expect = 1e-69 Identities = 198/217 (91%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 355 atggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacagg 414 ||||||| ||||||||||||||| ||| ||| ||||| ||||| ||| |||||||||| Sbjct: 1 atggcgatacatttatacaaaacttctacccctagcacgcgcaaaggagccgtagacagt 60 Query: 415 caagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggt 474 |||||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||| Sbjct: 61 caagtgaaatccaatccacgaacaaatttgatctatggacagcatcgttgtggtaaaggt 120 Query: 475 cgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctata 534 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 121 cgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtcataagcgtctata 179 Query: 535 ccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||| ||||||||||||||| ||||||||||| Sbjct: 180 ccgtaaaatcgattttcgacggaatgaaaaagacata 216
>gb|DQ069412.1| Ranunculus macranthus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 822 Score = 258 bits (130), Expect = 2e-65 Identities = 194/214 (90%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 358 gcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaa 417 |||| ||||||||||||||| ||| ||||||||||||||| ||| |||| | ||| ||| Sbjct: 1 gcgatacatttatacaaaacttctaccccgagcacacgcaatggagccgtcggcagtcaa 60 Query: 418 gtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgt 477 |||||||||||||||||||||||||||||| |||||| || | |||||||||||||||| Sbjct: 61 gtgaaatccaatccacgaaataatttgatctatggacagcgtcattgtggtaaaggtcgt 120 Query: 478 aattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccg 537 ||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| Sbjct: 121 aatgccagaggaatcattaccgtaaggcataga-gggggaggtcataagcgtctataccg 179 Query: 538 taaaatagattttcgacggaatcaaaaagacata 571 |||||| ||||||||||||||| ||||||||||| Sbjct: 180 taaaatcgattttcgacggaatgaaaaagacata 213
>gb|AC124969.12| Medicago truncatula clone mth2-15o15, complete sequence Length = 134863 Score = 256 bits (129), Expect = 7e-65 Identities = 228/261 (87%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||| ||||| ||| |||||||||| |||||| |||| |||||||||| Sbjct: 116566 gatttatgaatggaataaaatatgcaatatttacagacaaaagtattcggttattgggaa 116625 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | |||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||| Sbjct: 116626 aaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaaacattggg 116685 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 |||||||||| |||||||| ||||| ||||| ||||||| |||||||| || ||| | Sbjct: 116686 tcgaactcttttttggtgtcaaggtaatagctatgaatagtcatcgactcccaataaatg 116745 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| |||||||| |||| |||| | |||||||| ||||||||||||||| | Sbjct: 116746 gtagaagaatgcgacctattatgggacatagaccgcattacaaacgtatgatcattacgc 116805 Query: 290 ttcaaccgggttattctattc 310 ||||||||||||||||||||| Sbjct: 116806 ttcaaccgggttattctattc 116826 Score = 153 bits (77), Expect = 7e-34 Identities = 126/141 (89%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 431 cacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaa 490 |||||||| |||||| |||||| ||| | |||||||||||| |||||| ||||||||| Sbjct: 116912 cacgaaatcgtttgatttatggacagcatcattgtggtaaaggccgtaatgccagaggaa 116971 Query: 491 tcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagatttt 550 ||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 116972 tcattaccgcagggcataga-gggggaggtcataagcgtctataccgtaaaattgatttt 117030 Query: 551 cgacggaatcaaaaagacata 571 ||||| ||| ||||||||||| Sbjct: 117031 cgacgtaatgaaaaagacata 117051 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 345 acttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgca 397 |||||||| ||||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 116859 acttaatagcatggcgatacatttatacaaaacttctatcccgagcacccgca 116911
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 256 bits (129), Expect = 7e-65 Identities = 196/217 (90%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 355 atggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtagacagg 414 ||||||| ||||||||||||||| ||| ||||||||||||||| ||| |||||||| | Sbjct: 86952 atggcgatacatttatacaaaacttctaccccgagcacacgcaatggagccgtagacggt 86893 Query: 415 caagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggt 474 ||||||||||||||||||||||| ||||||||| |||||| ||| | |||| |||| ||| Sbjct: 86892 caagtgaaatccaatccacgaaacaatttgatctatggacagcatcattgtagtaagggt 86833 Query: 475 cgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctata 534 |||||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 86832 cgtaatgctagaggaatcattaccgcaaggcataga-gggggaggtcataagcgtctata 86774 Query: 535 ccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||| ||||||||||||||| ||||||||||| Sbjct: 86773 ccgtaaaatcgattttcgacggaatgaaaaagacata 86737 Score = 220 bits (111), Expect = 4e-54 Identities = 174/195 (89%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||| | Sbjct: 153030 gatttatggatggaatcaaatatgcagtctttacagaaaagagtattcggttattgggga 153089 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 153090 acaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 153149 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| | Sbjct: 153150 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccgggaaagg 153209 Query: 230 gtagaagaataggac 244 |||||||||| |||| Sbjct: 153210 gtagaagaatgggac 153224 Score = 220 bits (111), Expect = 4e-54 Identities = 174/195 (89%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||| | Sbjct: 87252 gatttatggatggaatcaaatatgcagtctttacagaaaagagtattcggttattgggga 87193 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 87192 acaatcaatatacttctaatgtcgaatcaggatcaactaggacagaaataaagcattggg 87133 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 ||||||||||||||||||| ||||| ||||| ||||||| |||||||| || ||||| | Sbjct: 87132 tcgaactcttctttggtgtcaaggtaatagctatgaatagtcatcgactcccgggaaagg 87073 Query: 230 gtagaagaataggac 244 |||||||||| |||| Sbjct: 87072 gtagaagaatgggac 87058 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Plus Query: 251 tgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttattctattc 310 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 153219 tgggacatacaatgcattacagacgtatgatcattacgcttcaaccgggttattctattc 153278 Query: 311 cac 313 ||| Sbjct: 153279 cac 153281 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 251 tgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttattctattc 310 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 87063 tgggacatacaatgcattacagacgtatgatcattacgcttcaaccgggttattctattc 87004 Query: 311 cac 313 ||| Sbjct: 87003 cac 87001 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 5 gaattcttatcgatactggaactca 29 ||||||||||||||||||||||||| Sbjct: 152991 gaattcttatcgatactggaactca 153015 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 5 gaattcttatcgatactggaactca 29 ||||||||||||||||||||||||| Sbjct: 87291 gaattcttatcgatactggaactca 87267
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 250 bits (126), Expect = 4e-63 Identities = 205/230 (89%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 68409 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 68468 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 ||||||| |||| ||||||||||||||||||||||| ||||||||| |||||| ||| | Sbjct: 68469 aaccgtatacagtcaagtgaaatccaatccacgaaaaaatttgatctatggacagcatca 68528 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| Sbjct: 68529 ttgtggtaaaggtcgtaatgtcagaggaatcattaccacaaggcataga-gggggaggtc 68587 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| ||||||||||||||| |||| ||||||| ||||| ||||| Sbjct: 68588 ataagcgtctataccgtaaaataagttttatacggaatgaaaaatacata 68637 Score = 250 bits (126), Expect = 4e-63 Identities = 205/230 (89%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 21419 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 21360 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 ||||||| |||| ||||||||||||||||||||||| ||||||||| |||||| ||| | Sbjct: 21359 aaccgtatacagtcaagtgaaatccaatccacgaaaaaatttgatctatggacagcatca 21300 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| Sbjct: 21299 ttgtggtaaaggtcgtaatgtcagaggaatcattaccacaaggcataga-gggggaggtc 21241 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| ||||||||||||||| |||| ||||||| ||||| ||||| Sbjct: 21240 ataagcgtctataccgtaaaataagttttatacggaatgaaaaatacata 21191 Score = 107 bits (54), Expect = 4e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||| ||| | | |||||||||||| |||||| ||| |||||||| || Sbjct: 68111 atttatggatggaataaaaaatgaagtatttacagacaaaagtattctgttattgggtaa 68170 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||| || ||| || |||||| ||||| |||| |||| ||||||| ||||||||||||| Sbjct: 68171 aaataaaaatatttataatgttgaatcaggatcaactaggacagaactaaagcattgggt 68230 Query: 171 cgaactcttctttg 184 |||||||||||||| Sbjct: 68231 cgaactcttctttg 68244 Score = 107 bits (54), Expect = 4e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 51 atttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaa 110 ||||||||||||||| ||| | | |||||||||||| |||||| ||| |||||||| || Sbjct: 21717 atttatggatggaataaaaaatgaagtatttacagacaaaagtattctgttattgggtaa 21658 Query: 111 gaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattgggt 170 ||| || ||| || |||||| ||||| |||| |||| ||||||| ||||||||||||| Sbjct: 21657 aaataaaaatatttataatgttgaatcaggatcaactaggacagaactaaagcattgggt 21598 Query: 171 cgaactcttctttg 184 |||||||||||||| Sbjct: 21597 cgaactcttctttg 21584 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 274 cgtatgatcattacccttcaaccgggttattctattccac 313 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 68341 cgtatgatcattacgcttcaaccgggttattctattccac 68380 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 274 cgtatgatcattacccttcaaccgggttattctattccac 313 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 21487 cgtatgatcattacgcttcaaccgggttattctattccac 21448
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 248 bits (125), Expect = 2e-62 Identities = 227/261 (86%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||| ||| | ||| |||||||||| |||||| |||| |||||||||| Sbjct: 39615 gatttatgaatggaataaaaaatgcaatatttacagacaaaagtattcggttattgggaa 39674 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | |||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||| Sbjct: 39675 aaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaaacattggg 39734 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 |||||||||| |||||||| ||||| ||||| ||||||| |||||||| || ||| | Sbjct: 39735 tcgaactcttttttggtgtcaaggtaatagctatgaatagtcatcgactcccaataaagg 39794 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| |||||||| |||| |||| | |||||||| ||||||||||||||| | Sbjct: 39795 gtagaagaatgcgacctattatgggacatagaccgcattacaaacgtatgatcattacgc 39854 Query: 290 ttcaaccgggttattctattc 310 ||||||||||||||||||||| Sbjct: 39855 ttcaaccgggttattctattc 39875 Score = 153 bits (77), Expect = 7e-34 Identities = 126/141 (89%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 431 cacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaa 490 |||||||| |||||| |||||| ||| | |||||||||||| |||||| ||||||||| Sbjct: 39961 cacgaaatcgtttgatttatggacagcatcattgtggtaaaggccgtaatgccagaggaa 40020 Query: 491 tcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagatttt 550 ||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 40021 tcattaccgcagggcataga-gggggaggtcataagcgtctataccgtaaaattgatttt 40079 Query: 551 cgacggaatcaaaaagacata 571 ||||| ||| ||||||||||| Sbjct: 40080 cgacgtaatgaaaaagacata 40100 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 345 acttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgca 397 |||||||| ||||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 39908 acttaatagcatggcgatacatttatacaaaacttctatcccgagcacccgca 39960
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 248 bits (125), Expect = 2e-62 Identities = 227/261 (86%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||| ||| | ||| |||||||||| |||||| |||| |||||||||| Sbjct: 94558 gatttatgaatggaataaaaaatgcaatatttacagacaaaagtattcggttattgggaa 94617 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | |||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||| Sbjct: 94618 aaaatcaatatacttttaatgtcgaatcaggatcaactaggacagaaataaaacattggg 94677 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 |||||||||| |||||||| ||||| ||||| ||||||| |||||||| || ||| | Sbjct: 94678 tcgaactcttttttggtgtcaaggtaatagctatgaatagtcatcgactcccaataaagg 94737 Query: 230 gtagaagaataggacctattctgggccatacaatgcattacagacgtatgatcattaccc 289 |||||||||| |||||||| |||| |||| | |||||||| ||||||||||||||| | Sbjct: 94738 gtagaagaatgcgacctattatgggacatagaccgcattacaaacgtatgatcattacgc 94797 Query: 290 ttcaaccgggttattctattc 310 ||||||||||||||||||||| Sbjct: 94798 ttcaaccgggttattctattc 94818 Score = 153 bits (77), Expect = 7e-34 Identities = 126/141 (89%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 431 cacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaa 490 |||||||| |||||| |||||| ||| | |||||||||||| |||||| ||||||||| Sbjct: 94904 cacgaaatcgtttgatttatggacagcatcattgtggtaaaggccgtaatgccagaggaa 94963 Query: 491 tcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagatttt 550 ||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 94964 tcattaccgcagggcataga-gggggaggtcataagcgtctataccgtaaaattgatttt 95022 Query: 551 cgacggaatcaaaaagacata 571 ||||| ||| ||||||||||| Sbjct: 95023 cgacgtaatgaaaaagacata 95043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 345 acttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgca 397 |||||||| ||||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 94851 acttaatagcatggcgatacatttatacaaaacttctatcccgagcacccgca 94903
>emb|AJ244023.3|SOL244023 Spinacia oleracea chloroplast rpL2 gene for chloroplast ribosomal protein L2 Length = 1080 Score = 244 bits (123), Expect = 3e-61 Identities = 204/230 (88%), Gaps = 7/230 (3%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| | ||||||||||||| || Sbjct: 106 aatacttaatagcatggcgatacatttatacaaaacttctacctcgagcacacgcaatgg 165 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||| ||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 166 agccgtt------caagtgaaatccaatccacgaaataatttgatctctggacagcgtcg 219 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 220 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 278 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 279 ataagcgtctataccgtaaaatagattttagacggaatgaaaaagacata 328 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 245 ctattctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttatt 304 ||||| |||| |||||||||||||||||||||||||||||||| |||||| || |||||| Sbjct: 9 ctattatgggacatacaatgcattacagacgtatgatcattacgcttcaatcgagttatt 68 Query: 305 ctattccac 313 ||||||||| Sbjct: 69 ctattccac 77
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 244 bits (123), Expect = 3e-61 Identities = 204/230 (88%), Gaps = 7/230 (3%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| | ||||||||||||| || Sbjct: 149686 aatacttaatagcatggcgatacatttatacaaaacttctacctcgagcacacgcaatgg 149745 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||| ||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 149746 agccgtt------caagtgaaatccaatccacgaaataatttgatctctggacagcgtcg 149799 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 149800 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 149858 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 149859 ataagcgtctataccgtaaaatagattttagacggaatgaaaaagacata 149908 Score = 244 bits (123), Expect = 3e-61 Identities = 204/230 (88%), Gaps = 7/230 (3%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| | ||||||||||||| || Sbjct: 83759 aatacttaatagcatggcgatacatttatacaaaacttctacctcgagcacacgcaatgg 83700 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||| ||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 83699 agccgtt------caagtgaaatccaatccacgaaataatttgatctctggacagcgtcg 83646 Query: 462 ttgtggtaaaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtc 521 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 83645 ttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcataga-gggggaggtc 83587 Query: 522 ataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||| ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 83586 ataagcgtctataccgtaaaatagattttagacggaatgaaaaagacata 83537 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 197 tagctgtgaatagccatcgactacctggaaaaggtagaagaataggacctattctgggcc 256 ||||| ||||||| |||||||| || ||||| |||||||| || ||||||||| |||| | Sbjct: 149541 tagctatgaatagtcatcgactcccgggaaagggtagaaggatgggacctattatgggac 149600 Query: 257 atacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||| Sbjct: 149601 atacaatgcattacagacgtatgatcattacgcttcaatcgagttattctattccac 149657 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 197 tagctgtgaatagccatcgactacctggaaaaggtagaagaataggacctattctgggcc 256 ||||| ||||||| |||||||| || ||||| |||||||| || ||||||||| |||| | Sbjct: 83904 tagctatgaatagtcatcgactcccgggaaagggtagaaggatgggacctattatgggac 83845 Query: 257 atacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||| Sbjct: 83844 atacaatgcattacagacgtatgatcattacgcttcaatcgagttattctattccac 83788 Score = 133 bits (67), Expect = 7e-28 Identities = 112/127 (88%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||| | Sbjct: 149408 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcagttattgggga 149467 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | || |||||||||| |||||||||||| ||| |||| ||| |||||||||||||||| Sbjct: 149468 aaaagcaatatacttctaatgtcgaatcaagatcaactaggacggaaataaagcattggg 149527 Query: 170 tcgaact 176 ||||||| Sbjct: 149528 tcgaact 149534 Score = 133 bits (67), Expect = 7e-28 Identities = 112/127 (88%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||| | Sbjct: 84037 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcagttattgggga 83978 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | || |||||||||| |||||||||||| ||| |||| ||| |||||||||||||||| Sbjct: 83977 aaaagcaatatacttctaatgtcgaatcaagatcaactaggacggaaataaagcattggg 83918 Query: 170 tcgaact 176 ||||||| Sbjct: 83917 tcgaact 83911
>gb|AC113339.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0047B19, from chromosome 10, complete sequence Length = 137015 Score = 236 bits (119), Expect = 6e-59 Identities = 129/131 (98%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 441 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113368 tttgatccatggacggcaccgttgtggtaaaggtcgtaattccagaggaatcattaccgc 113309 Query: 501 aaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacggaatc 560 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 113308 aaggcataga-gggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatc 113250 Query: 561 aaaaagacata 571 ||||||||||| Sbjct: 113249 aaaaagacata 113239
>emb|X59015.1|CHPSRPL2 P.sativum chloroplast genes for ribosomal protein L2 and ribosomal protein S19 Length = 3573 Score = 218 bits (110), Expect = 2e-53 Identities = 226/265 (85%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||||||||| ||||||||||||||||||||| |||| |||| ||||| Sbjct: 654 gatttatgaatggaatcaaatatgcagtatttacagaaaaaagtattcggttatggggaa 713 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | ||||||||||||||| |||||||||| |||| |||| ||||||||| || |||||| Sbjct: 714 aaaatcaatatacttttgatgtcgaatcaggatcaactaggacagaaatcaaacattgga 773 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgactacctggaaaag 229 | ||||||||||||||||| | ||| ||||| ||||||| |||||||| || |||| | Sbjct: 774 tggaactcttctttggtgtcagggtaatagctatgaatagtcatcgactcccaagaaagg 833 Query: 230 gt------agaagaataggacctattctgggccatacaatgcattacagacgtatgatca 283 || |||||||| |||||||| | || |||||||||||||||| ||||||||||| Sbjct: 834 gtagaagaagaagaatgcgacctattataggacatacaatgcattacaaacgtatgatca 893 Query: 284 ttacccttcaaccgggttattctat 308 |||| ||||||||| |||||||||| Sbjct: 894 ttacgcttcaaccgtgttattctat 918 Score = 202 bits (102), Expect = 9e-49 Identities = 193/222 (86%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 350 ataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtag 409 |||| ||||||| |||||||| |||||| ||| ||||||||||||||| ||| ||||| Sbjct: 1194 ataacatggcgatacatttatccaaaacttctagcccgagcacacgcaatggagccgtaa 1253 Query: 410 acaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggta 469 |||| ||||||||||||||| |||||||| |||||| ||||| ||| | |||||||| Sbjct: 1254 acagtcaagtgaaatccaattcacgaaatcgtttgatttctggacagcatcattgtggta 1313 Query: 470 aaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgc 529 |||| |||||| | |||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1314 aagggcgtaatccgagaggaatcattaccgcagggcataga-gggggaggtcataagcgt 1372 Query: 530 ctataccgtaaaatagattttcgacggaatcaaaaagacata 571 |||||||||||||| |||||| |||| ||| ||||||||||| Sbjct: 1373 ctataccgtaaaattgattttagacgcaatgaaaaagacata 1414 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 273 acgtatgatcattacccttcaaccgggttattctattccac 313 ||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 1110 acgtatgatcattacgcttcaaccgtgttattctattccac 1150
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 216 bits (109), Expect = 6e-53 Identities = 189/213 (88%), Gaps = 7/213 (3%) Strand = Plus / Minus Query: 350 ataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtag 409 |||||| ||||||| |||||||||||||| | || | ||||| | |||||| |||| ||| Sbjct: 9365 ataataaggcgaaatatttatacaaaacatcgatactgagcatatgcaaggaaacc-tag 9307 Query: 410 acaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggta 469 ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||| Sbjct: 9306 acaggcaagtgaaatccaatccacgaaataaattaatccatgaacggcaccgttgtggta 9247 Query: 470 aaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgc 529 ||| ||||||| |||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 9246 aagatcgtaatgccagaggaatcattaccgtaaggcataga-gggggagg-----cgcgc 9193 Query: 530 ctataccgtaaaatagattttcgacggaatcaa 562 |||||||||||||| |||||||||||||||||| Sbjct: 9192 ctataccgtaaaatcgattttcgacggaatcaa 9160
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region Length = 90923 Score = 216 bits (109), Expect = 6e-53 Identities = 189/213 (88%), Gaps = 7/213 (3%) Strand = Plus / Plus Query: 350 ataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaaccgtag 409 |||||| ||||||| |||||||||||||| | || | ||||| | |||||| |||| ||| Sbjct: 6281 ataataaggcgaaatatttatacaaaacatcgatactgagcatatgcaaggaaacc-tag 6339 Query: 410 acaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgtggta 469 ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||| Sbjct: 6340 acaggcaagtgaaatccaatccacgaaataaattaatccatgaacggcaccgttgtggta 6399 Query: 470 aaggtcgtaattccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgc 529 ||| ||||||| |||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 6400 aagatcgtaatgccagaggaatcattaccgtaaggcataga-gggggagg-----cgcgc 6453 Query: 530 ctataccgtaaaatagattttcgacggaatcaa 562 |||||||||||||| |||||||||||||||||| Sbjct: 6454 ctataccgtaaaatcgattttcgacggaatcaa 6486
>gb|DQ452521.1| Cucurbita pepo RAPD marker OPAA01_912 genomic sequence Length = 912 Score = 204 bits (103), Expect = 2e-49 Identities = 170/191 (89%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 128 atgtcgaatcgggattcactaagacagaaataaagcattgggtcgaactcttctttggtg 187 ||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||| Sbjct: 631 atgtcgaatcgggatcaactaggacataaataaagcattgggtcgaactcttctttggta 690 Query: 188 ttaaggtggtagctgtgaatagccatcgactacctggaaaagg-tagaagaataggacct 246 | ||||| ||||| ||||||| |||||||| || || ||||| ||||||||| |||||| Sbjct: 691 tcaaggtaatagctatgaatagtcatcgactccccgggaaagggtagaagaatgggacct 750 Query: 247 attctgggccatacaatgcattacagacgtatgatcattacccttcaaccgggttattct 306 ||| |||| |||||||||| ||||||||||||||||||||| ||||||| | |||||||| Sbjct: 751 attatgggacatacaatgcgttacagacgtatgatcattacgcttcaactgagttattct 810 Query: 307 attccacttct 317 ||||||||||| Sbjct: 811 attccacttct 821 Score = 44.1 bits (22), Expect = 0.50 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||| || Sbjct: 846 aatacttaatagcatggcgatgtatttatacaaaacttcta-cccgagcacacgcaatgg 904 Query: 402 aaccgt 407 | |||| Sbjct: 905 agccgt 910
>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete sequence Length = 139074 Score = 198 bits (100), Expect = 1e-47 Identities = 260/311 (83%), Gaps = 6/311 (1%) Strand = Plus / Minus Query: 171 cgaactcttctttg--gtgttaaggtggtagctgtgaatagccatcgactacctggaaaa 228 |||||||||||||| | |||||||| ||||||||||||||| |||||||||| |||| Sbjct: 47516 cgaactcttctttgtagagttaaggtagtagctgtgaatagctatcgactacccagaaag 47457 Query: 229 ggtagaagaataggacctattctgggccatacaatgcattacagacgtat--gatcatta 286 ||||||||||| || |||||| | |||||||||||||||||| |||| |||||||| Sbjct: 47456 ggtagaagaatgggccctattatattacatacaatgcattacagatgtatatgatcatta 47397 Query: 287 cccttcaaccgggttattctattccacttctagatagagnnnnnnnc-taaaggagaata 345 | |||| ||| |||||||||||||||||||||||||| ||||| | |||| Sbjct: 47396 ctcttcgacctaattattctattccacttctagatagagaaaaaaaaataaagaaaaata 47337 Query: 346 cttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaacc 405 ||||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||| | Sbjct: 47336 cttaataatatggggaaacatttatacaaaacacttattccaagcacacgcaacggaa-c 47278 Query: 406 gtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgt 465 |||| | |||||||||||||||| |||||||||||| | |||||||| ||| |||| Sbjct: 47277 atagataaacaagtgaaatccaatctacgaaataatttaacccatggacaacactattgt 47218 Query: 466 ggtaaaggtcg 476 ||||||||||| Sbjct: 47217 ggtaaaggtcg 47207 Score = 71.9 bits (36), Expect = 2e-09 Identities = 73/84 (86%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 488 gaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagat 547 ||||||||||||||| ||||| |||| | | |||||||||| ||||||||||||| || Sbjct: 47207 gaatcattaccgcaaagcatatagggag-atgtcataagcgtatataccgtaaaatcaat 47149 Query: 548 tttcgacggaatcaaaaagacata 571 ||| |||||||| ||||||||||| Sbjct: 47148 ttttgacggaattaaaaagacata 47125
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 198 bits (100), Expect = 1e-47 Identities = 260/311 (83%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 171 cgaactcttctttg--gtgttaaggtggtagctgtgaatagccatcgactacctggaaaa 228 |||||||||||||| | |||||||| ||||||||||||||| |||||||||| |||| Sbjct: 28105589 cgaactcttctttgtagagttaaggtagtagctgtgaatagctatcgactacccagaaag 28105648 Query: 229 ggtagaagaataggacctattctgggccatacaatgcattacagacgtat--gatcatta 286 ||||||||||| || |||||| | |||||||||||||||||| |||| |||||||| Sbjct: 28105649 ggtagaagaatgggccctattatattacatacaatgcattacagatgtatatgatcatta 28105708 Query: 287 cccttcaaccgggttattctattccacttctagatagagnnnnnnnc-taaaggagaata 345 | |||| ||| |||||||||||||||||||||||||| ||||| | |||| Sbjct: 28105709 ctcttcgacctaattattctattccacttctagatagagaaaaaaaaataaagaaaaata 28105768 Query: 346 cttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaacc 405 ||||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||| | Sbjct: 28105769 cttaataatatggggaaacatttatacaaaacacttattccaagcacacgcaacggaa-c 28105827 Query: 406 gtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgt 465 |||| | |||||||||||||||| |||||||||||| | |||||||| ||| |||| Sbjct: 28105828 atagataaacaagtgaaatccaatctacgaaataatttaacccatggacaacactattgt 28105887 Query: 466 ggtaaaggtcg 476 ||||||||||| Sbjct: 28105888 ggtaaaggtcg 28105898 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Minus Query: 513 ggggaggtcataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 25721320 ggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatcaaaaagacata 25721262 Score = 71.9 bits (36), Expect = 2e-09 Identities = 73/84 (86%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 488 gaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagat 547 ||||||||||||||| ||||| |||| | | |||||||||| ||||||||||||| || Sbjct: 28105898 gaatcattaccgcaaagcatatagggag-atgtcataagcgtatataccgtaaaatcaat 28105956 Query: 548 tttcgacggaatcaaaaagacata 571 ||| |||||||| ||||||||||| Sbjct: 28105957 ttttgacggaattaaaaagacata 28105980 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 130 gtcgaatcgggattcactaagacagaaataaagcattgggt 170 |||||||| |||||||||||||||| |||||||||||||| Sbjct: 4553785 gtcgaatcaagattcactaagacagagataaagcattgggt 4553825
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 198 bits (100), Expect = 1e-47 Identities = 260/311 (83%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 171 cgaactcttctttg--gtgttaaggtggtagctgtgaatagccatcgactacctggaaaa 228 |||||||||||||| | |||||||| ||||||||||||||| |||||||||| |||| Sbjct: 28196913 cgaactcttctttgtagagttaaggtagtagctgtgaatagctatcgactacccagaaag 28196972 Query: 229 ggtagaagaataggacctattctgggccatacaatgcattacagacgtat--gatcatta 286 ||||||||||| || |||||| | |||||||||||||||||| |||| |||||||| Sbjct: 28196973 ggtagaagaatgggccctattatattacatacaatgcattacagatgtatatgatcatta 28197032 Query: 287 cccttcaaccgggttattctattccacttctagatagagnnnnnnnc-taaaggagaata 345 | |||| ||| |||||||||||||||||||||||||| ||||| | |||| Sbjct: 28197033 ctcttcgacctaattattctattccacttctagatagagaaaaaaaaataaagaaaaata 28197092 Query: 346 cttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaagggaacc 405 ||||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||| | Sbjct: 28197093 cttaataatatggggaaacatttatacaaaacacttattccaagcacacgcaacggaa-c 28197151 Query: 406 gtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccgttgt 465 |||| | |||||||||||||||| |||||||||||| | |||||||| ||| |||| Sbjct: 28197152 atagataaacaagtgaaatccaatctacgaaataatttaacccatggacaacactattgt 28197211 Query: 466 ggtaaaggtcg 476 ||||||||||| Sbjct: 28197212 ggtaaaggtcg 28197222 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Minus Query: 513 ggggaggtcataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 25812629 ggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatcaaaaagacata 25812571 Score = 71.9 bits (36), Expect = 2e-09 Identities = 73/84 (86%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 488 gaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagat 547 ||||||||||||||| ||||| |||| | | |||||||||| ||||||||||||| || Sbjct: 28197222 gaatcattaccgcaaagcatatagggag-atgtcataagcgtatataccgtaaaatcaat 28197280 Query: 548 tttcgacggaatcaaaaagacata 571 ||| |||||||| ||||||||||| Sbjct: 28197281 ttttgacggaattaaaaagacata 28197304 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 130 gtcgaatcgggattcactaagacagaaataaagcattgggt 170 |||||||| |||||||||||||||| |||||||||||||| Sbjct: 4553900 gtcgaatcaagattcactaagacagagataaagcattgggt 4553940
>gb|AY396402.1| Praecitrullus fistulosus ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 164 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396401.1| Sechium edule ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396400.1| Sicyos angulatus ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396399.1| Trichosanthes cucumerina ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396397.1| Luffa echinata ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396396.1| Cucurbita pepo ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396395.1| Benincasa hispida ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396394.1| Luffa quinquefida ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396393.1| Marah oreganus ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396392.1| Echinocystis lobata ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396389.1| Citrullus colocynthis ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396388.1| Acanthosicyos naudinianus ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396386.1| Coccinia palmata ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396385.1| Diplocyclos palmatus ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 172 bits (87), Expect = 8e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396391.1| Lagenaria siceraria ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 165 bits (83), Expect = 2e-37 Identities = 125/139 (89%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||| ||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcgcacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396390.1| Citrullus lanatus ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 165 bits (83), Expect = 2e-37 Identities = 125/139 (89%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||| ||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcgcacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 80 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>gb|AY396384.1| Ecballium elaterium ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 165 Score = 157 bits (79), Expect = 5e-35 Identities = 124/139 (89%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 140 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 81 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| || Sbjct: 80 agtcgtagacagtcaagtaaaatccaatccacgaaataatttgatctctggacagcatcg 21 Query: 462 ttgtggtaaaggtcgtaat 480 ||||||||||||||||||| Sbjct: 20 ttgtggtaaaggtcgtaat 2
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 157 bits (79), Expect = 5e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 364 catttatacaaaacacctatcccgagcacacgcaagggaaccgtagacaggcaagtgaaa 423 |||||||||||||||| ||||| |||||||| |||||||||| |||| ||| |||||||| Sbjct: 32805 catttatacaaaacacttatcctgagcacactcaagggaaccatagataggtaagtgaaa 32746 Query: 424 tccaatccacgaaataatttgatccatggacggcaccgttgtggtaaaggtcgtaattc 482 |||||| || |||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 32745 tccaattcatgaaataatttaatccatggacggcaccattgtggtaaaggtcgtaattc 32687
>gb|AY396398.1| Luffa graveolens ribosomal protein L2 (rpl2) gene, partial cds; and rpl2-rpl23 intergenic spacer, partial sequence; chloroplast Length = 132 Score = 151 bits (76), Expect = 3e-33 Identities = 115/128 (89%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 128 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 69 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatccatggacggcaccg 461 | |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 68 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatctatggacagcatcg 9 Query: 462 ttgtggta 469 |||||||| Sbjct: 8 ttgtggta 1
>gb|AY596772.1| Humbertia madagascariensis ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 595 Score = 147 bits (74), Expect = 5e-32 Identities = 87/90 (96%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 482 ccagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaa 541 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 3 ccagaggaatcattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaa 61 Query: 542 atagattttcgacggaatcaaaaagacata 571 |||||||||||||||||| ||||||||||| Sbjct: 62 atagattttcgacggaatgaaaaagacata 91
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 143 bits (72), Expect = 7e-31 Identities = 114/129 (88%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 258 tacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccacttct 317 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8556119 tacaatgcattacaaacgtatgaccattacccttcaaccgggttattctattccacttct 8556060 Query: 318 agatag-agnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaaa 376 |||||| | |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 8556059 agatagaaaaaaaaaactaaaggagactacttaataatgcagcgaaacatttatacaaaa 8556000 Query: 377 cacctatcc 385 ||||||||| Sbjct: 8555999 cacctatcc 8555991 Score = 113 bits (57), Expect = 6e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 265 cattacagacgtatgatcattacccttcaaccgggttattctattccacttctagataga 324 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 20978347 cattacagacgtatgatcattaccctttaaccgggttattctattccacttctagataga 20978406 Query: 325 g 325 | Sbjct: 20978407 g 20978407 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||||||| Sbjct: 26446117 catacaatgcattaccaatgtatgatcattacccttcaaccgagttactctattccactt 26446058 Query: 316 ctagataga 324 ||||||||| Sbjct: 26446057 ctagataga 26446049 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/60 (91%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||| Sbjct: 26446177 atggaatcaaatacgcactatttacggaaaa--gtcttcatttattgggaaagaatcaat 26446120 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaa 90 |||||||||||||||||||||||||||||||| Sbjct: 5614854 atggaatcaaatacgcagtatttacagaaaaa 5614885 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 359 cgaaacatttatacaaaacacctatcccgagc 390 |||||||||||||||||| ||||||||||||| Sbjct: 26446025 cgaaacatttatacaaaatacctatcccgagc 26445994 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 96 tcgtttattgggaaagaatcaatatacttttaatgtc 132 |||||||| |||||||||||||||| ||||||||| Sbjct: 21482757 tcgtttatgaggaaagaatcaatataaatttaatgtc 21482793
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 143 bits (72), Expect = 7e-31 Identities = 114/129 (88%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 258 tacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccacttct 317 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8556002 tacaatgcattacaaacgtatgaccattacccttcaaccgggttattctattccacttct 8555943 Query: 318 agatag-agnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaaa 376 |||||| | |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 8555942 agatagaaaaaaaaaactaaaggagactacttaataatgcagcgaaacatttatacaaaa 8555883 Query: 377 cacctatcc 385 ||||||||| Sbjct: 8555882 cacctatcc 8555874 Score = 113 bits (57), Expect = 6e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 265 cattacagacgtatgatcattacccttcaaccgggttattctattccacttctagataga 324 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 20904556 cattacagacgtatgatcattaccctttaaccgggttattctattccacttctagataga 20904615 Query: 325 g 325 | Sbjct: 20904616 g 20904616 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||||||| Sbjct: 26374286 catacaatgcattaccaatgtatgatcattacccttcaaccgagttactctattccactt 26374227 Query: 316 ctagataga 324 ||||||||| Sbjct: 26374226 ctagataga 26374218 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/60 (91%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||| Sbjct: 26374346 atggaatcaaatacgcactatttacggaaaa--gtcttcatttattgggaaagaatcaat 26374289 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaa 90 |||||||||||||||||||||||||||||||| Sbjct: 5614843 atggaatcaaatacgcagtatttacagaaaaa 5614874 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 359 cgaaacatttatacaaaacacctatcccgagc 390 |||||||||||||||||| ||||||||||||| Sbjct: 26374194 cgaaacatttatacaaaatacctatcccgagc 26374163 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 96 tcgtttattgggaaagaatcaatatacttttaatgtc 132 |||||||| |||||||||||||||| ||||||||| Sbjct: 21411078 tcgtttatgaggaaagaatcaatataaatttaatgtc 21411114
>emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb0034B07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125000 Score = 143 bits (72), Expect = 7e-31 Identities = 114/129 (88%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 258 tacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccacttct 317 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 18866 tacaatgcattacaaacgtatgaccattacccttcaaccgggttattctattccacttct 18807 Query: 318 agatag-agnnnnnnnctaaaggagaatacttaataatatggcgaaacatttatacaaaa 376 |||||| | |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 18806 agatagaaaaaaaaaactaaaggagactacttaataatgcagcgaaacatttatacaaaa 18747 Query: 377 cacctatcc 385 ||||||||| Sbjct: 18746 cacctatcc 18738
>emb|X12845.1|MIOSREP Rice mitochondrial short interspersed repeat DNA (pMt-0) upstream rearranged rpl2 gene (pseudo) Length = 163 Score = 141 bits (71), Expect = 3e-30 Identities = 91/100 (91%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 62 catacaatgcattacaaacgtatgaccattacccttcaaccgggttattctattccactt 121 Query: 316 ctagatagagnnnnnnnctaaaggagaatacttaataata 355 |||||||||| ||||||||||||||||||||||| Sbjct: 122 ctagatagagaaaaaaactaaaggagaatacttaataata 161 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| Sbjct: 1 atggaatcaaatacgcactatttacagaaaaa-gtcttcatttattgggaaagaatcaat 59
>gb|AY596743.1| Astripomoea grantii ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 592 Score = 137 bits (69), Expect = 4e-29 Identities = 85/89 (95%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 483 cagaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaa 542 ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 1 cagaggaatcattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtataa 59 Query: 543 tagattttcgacggaatcaaaaagacata 571 ||||||||||||||||| ||||||||||| Sbjct: 60 tagattttcgacggaatgaaaaagacata 88
>gb|AC150786.21| Medicago truncatula clone mth2-170o9, complete sequence Length = 142649 Score = 137 bits (69), Expect = 4e-29 Identities = 145/169 (85%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||| ||||||| | ||| ||| |||||||||| |||||| |||| |||||| || Sbjct: 65193 gatttatgaatggaataatatatgcaatatttacagacaaaagtgttcggttattgtaaa 65134 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | | |||||||||||||||||||||||| |||| |||| || ||||||||| ||||||| Sbjct: 65133 a-attcaatatacttttaatgtcgaatcaggatcaactaggatagaaataaaacattggg 65075 Query: 170 tcgaactcttctttggtgttaaggtggtagctgtgaatagccatcgact 218 ||||||||||||||| ||| ||||| ||||| ||||||| |||||||| Sbjct: 65074 tcgaactcttctttgatgtcaaggtaatagctatgaatagtcatcgact 65026
>emb|X07462.1|CHSOTRNI Spinach chloroplast trnI and rpl23 genes Length = 600 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 197 tagctgtgaatagccatcgactacctggaaaaggtagaagaataggacctattctgggcc 256 ||||| ||||||| |||||||| || ||||| |||||||| || ||||||||| |||| | Sbjct: 381 tagctatgaatagtcatcgactcccgggaaagggtagaaggatgggacctattatgggac 440 Query: 257 atacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccac 313 ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||| Sbjct: 441 atacaatgcattacagacgtatgatcattacgcttcaatcgagttattctattccac 497 Score = 133 bits (67), Expect = 7e-28 Identities = 112/127 (88%) Strand = Plus / Plus Query: 50 gatttatggatggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaa 109 |||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||| | Sbjct: 248 gatttatggatggaatcaaatatgcagtatttacagacaaaagtattcagttattgggga 307 Query: 110 agaatcaatatacttttaatgtcgaatcgggattcactaagacagaaataaagcattggg 169 | || |||||||||| |||||||||||| ||| |||| ||| |||||||||||||||| Sbjct: 308 aaaagcaatatacttctaatgtcgaatcaagatcaactaggacggaaataaagcattggg 367 Query: 170 tcgaact 176 ||||||| Sbjct: 368 tcgaact 374 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| | ||||||||||||| || Sbjct: 526 aatacttaatagcatggcgatacatttatacaaaacttctacctcgagcacacgcaatgg 585 Query: 402 aaccgt 407 | |||| Sbjct: 586 agccgt 591
>gb|AY596758.1| Porana volubilis ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 590 Score = 133 bits (67), Expect = 7e-28 Identities = 83/87 (95%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 485 gaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaata 544 ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 1 gaggaatcattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatt 59 Query: 545 gattttcgacggaatcaaaaagacata 571 ||||||||||||||| ||||||||||| Sbjct: 60 gattttcgacggaatgaaaaagacata 86
>gb|AY596748.1| Convolvulus assyricus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 590 Score = 133 bits (67), Expect = 7e-28 Identities = 83/87 (95%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 485 gaggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaata 544 ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||| Sbjct: 2 gaggaatcattaccgcaaggcatagaggggg-agttcataagcgtctataccgtaaaata 60 Query: 545 gattttcgacggaatcaaaaagacata 571 ||||||||||||||| ||||||||||| Sbjct: 61 gattttcgacggaatgaaaaagacata 87
>gb|AY245301.1| Iris fulva clone FR2 chloroplast sequence Length = 798 Score = 133 bits (67), Expect = 7e-28 Identities = 120/138 (86%), Gaps = 6/138 (4%) Strand = Plus / Minus Query: 5 gaattcttatcgatactggaactcagngccataggagggaaagtcgatttatggatggaa 64 ||||||||||||||||||||||||| |||| |||| | ||||||||||||||| Sbjct: 505 gaattcttatcgatactggaactca------tagggaagaaaatggatttatggatggaa 452 Query: 65 tcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaatatactt 124 ||||||| ||||||||||||||||||||| |||| |||||||| || ||||||||||||| Sbjct: 451 tcaaatatgcagtatttacagaaaaaagtattcggttattggggaacaatcaatatactt 392 Query: 125 ttaatgtcgaatcgggat 142 |||||||||||| |||| Sbjct: 391 ctaatgtcgaatcaggat 374
>gb|AY596742.1| Ipomoea batatas ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 512 Score = 131 bits (66), Expect = 3e-27 Identities = 82/86 (95%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 486 aggaatcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatag 545 |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 1 aggaatcattaccgcaaggcatagaggggg-aggtcataagcgtttataccgtaaaatag 59 Query: 546 attttcgacggaatcaaaaagacata 571 |||||||||||||| ||||||||||| Sbjct: 60 attttcgacggaatgaaaaagacata 85
>gb|AY396387.1| Bryonia dioica ribosomal protein L2 (rpl2) gene, partial cds; rpl2-rpl23 intergenic spacer, complete sequence; and ribosomal protein L23 (rpl23) gene, partial cds; chloroplast Length = 155 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Minus Query: 342 aatacttaataatatggcgaaacatttatacaaaacacctatcccgagcacacgcaaggg 401 ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| || Sbjct: 130 aatacttaatagcatggcgatacatttatacaaaacttctaccccgagcacacgcaatgg 71 Query: 402 aaccgtagacaggcaagtgaaatccaatccacgaaataatttgatc 447 | |||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 70 agccgtagacagtcaagtaaaatccaatccacgaaataatttgatc 25
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111595 catacaatgcattacagacgtatgatcattaccctttaaccgggttattctattccactt 111654 Query: 316 ctagatagag 325 |||||||||| Sbjct: 111655 ctagatagag 111664 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 279 gatcattacccttcaaccgggttattctattccacttctagatagag 325 ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 72273 gatcattaccctttaaccgggttattctattccacttctagatagag 72227 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 87 aaaaagtcttcgtttattgggaaagaatcaat 118 ||||||| ||| |||||||||||||||||||| Sbjct: 111561 aaaaagttttcatttattgggaaagaatcaat 111592
>emb|X12844.1|CHOSREP Rice chloroplast DNA short interspersed repeat (pCt-3) upstream rpl2 gene ( also present in mitDNA downstream rbcL gene) Length = 150 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 62 catacaatgcattacagacgtatgatcattaccctttaaccgggttattctattccactt 121 Query: 316 ctagatagag 325 |||||||||| Sbjct: 122 ctagatagag 131 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 1 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 59
>gb|AY596765.1| Maripa repens ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 584 Score = 129 bits (65), Expect = 1e-26 Identities = 78/81 (96%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 491 tcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagatttt 550 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 1 tcattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatagatttt 59 Query: 551 cgacggaatcaaaaagacata 571 ||||||||| ||||||||||| Sbjct: 60 cgacggaatgaaaaagacata 80
>gb|AY147701.1| Roystonea princeps ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1266 Score = 127 bits (64), Expect = 4e-26 Identities = 77/80 (96%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgcctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147693.1| Ananas comosus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1273 Score = 127 bits (64), Expect = 4e-26 Identities = 77/80 (96%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||||||||||||||| Sbjct: 60 gacggaatcaaaaagacata 79
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 23203221 catacaatgcattacagacgtatgatcattaccctttaaccgggttattccattccactt 23203162 Query: 316 ctagatagag 325 |||||||||| Sbjct: 23203161 ctagatagag 23203152 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 23203282 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 23203224 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 418 gtgaaatccaatccacgaaat 438 ||||||||||||||||||||| Sbjct: 27408088 gtgaaatccaatccacgaaat 27408068
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 153869 catacaatgcattacagacgtatgatcattaccctttaaccgggttattccattccactt 153810 Query: 316 ctagatagag 325 |||||||||| Sbjct: 153809 ctagatagag 153800 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 153930 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 153872
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 37983 catacaatgcattacagacgtatgatcattaccctttaaccgggttattccattccactt 37924 Query: 316 ctagatagag 325 |||||||||| Sbjct: 37923 ctagatagag 37914 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 38044 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 37986
>gb|AY147729.1| Narcissus elegans ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1277 Score = 121 bits (61), Expect = 3e-24 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatnaaaaagacata 79
>ref|NM_195990.1| Oryza sativa (japonica cultivar-group) hypothetical protein ORF42 homology to rpl23 from chromosome 10 chloroplast insertion (OSJNBb0075K12.40), mRNA Length = 129 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 256 catacaatgcattacagacgtatgatcattacccttcaaccgggttattctattccactt 315 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 62 catacaatgcattacagacgtatgattattaccctttaaccgggttattctattccactt 121 Query: 316 ctagatag 323 |||||||| Sbjct: 122 ctagatag 129 Score = 87.7 bits (44), Expect = 4e-14 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 59 atggaatcaaatacgcagtatttacagaaaaaagtcttcgtttattgggaaagaatcaat 118 ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 1 atggaatcaaatacgcagtatttacag-aaaaagttttcatttattgggaaagaatcaat 59
>gb|AY147730.1| Yucca glauca ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1245 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147728.1| Muscari comosum ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1268 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaattgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147727.1| Muilla maritima ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1268 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147726.1| Smilacina racemosa ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1268 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147724.1| Chlorophytum comosum ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1268 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaattgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147723.1| Asparagus officinalis ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1268 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147722.1| Aphyllanthes monspeliensis ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1269 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147719.1| Xanthorrhoea resinosa ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1267 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147706.1| Asphodelus albus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1267 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147703.1| Typha latifolia ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1266 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||||||||||||||| Sbjct: 60 gacggaatcaaaaagacata 79
>gb|AY147698.1| Mayaca fluviatilis ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1258 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 ||||| |||||||||||||| Sbjct: 60 gacgggatcaaaaagacata 79
>gb|AY147697.1| Hydrothrix gardneri ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1269 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatagattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147689.1| Narthecium ossifragum ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1268 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatagattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147685.1| Butomus umbellatus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1268 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY596746.1| Merremia vitifolia ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 580 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 495 taccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgac 554 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 1 taccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatagattttcgac 59 Query: 555 ggaatcaaaaagacat 570 ||||| |||||||||| Sbjct: 60 ggaatgaaaaagacat 75
>gb|AY007492.1| Hydrastis canadensis ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1264 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AF188855.1|AF188855 Nymphaea odorata ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1274 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY007490.1| Chloranthus japonicus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1269 Score = 119 bits (60), Expect = 1e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatagattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY596773.1| Schizanthus pinnatus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1269 Score = 117 bits (59), Expect = 4e-23 Identities = 86/93 (92%), Gaps = 4/93 (4%) Strand = Plus / Plus Query: 482 ccagaggaatcattaccgcaaggcatagaggggggagg---tcataagcgcctataccgt 538 |||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| Sbjct: 2 ccagaggaatcattaccgcaaggcatagaggggg-aggntttcataagcgtctataccgt 60 Query: 539 aaaatagattttcgacggaatcaaaaagacata 571 ||||| ||||||||||||||| ||||||||||| Sbjct: 61 aaaatggattttcgacggaatgaaaaagacata 93
>gb|AY596745.1| Ipomoea pes-tigridis ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 577 Score = 117 bits (59), Expect = 4e-23 Identities = 72/75 (96%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 497 ccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacgg 556 ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 ccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatagattttcgacgg 59 Query: 557 aatcaaaaagacata 571 ||| ||||||||||| Sbjct: 60 aatgaaaaagacata 74
>gb|AY596755.1| Stylisma patens ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 585 Score = 115 bits (58), Expect = 2e-22 Identities = 77/82 (93%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 490 atcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattt 549 ||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct: 1 atcattaccgcaaggcatagaggagg-aggtcataagcgtctataccgtaaaatagattt 59 Query: 550 tcgacggaatcaaaaagacata 571 ||| |||||| ||||||||||| Sbjct: 60 tcggcggaatgaaaaagacata 81
>gb|AY596767.1| Erycibe glomerata ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 576 Score = 113 bits (57), Expect = 6e-22 Identities = 70/73 (95%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 499 gcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacggaa 558 ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 gcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatagattttcgacggaa 59 Query: 559 tcaaaaagacata 571 | ||||||||||| Sbjct: 60 tgaaaaagacata 72
>gb|AF123787.1|AF123787 Cabomba caroliniana ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1272 Score = 113 bits (57), Expect = 6e-22 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| |||| |||||| Sbjct: 60 gacggaatgaaaangacata 79
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 113 bits (57), Expect = 6e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 265 cattacagacgtatgatcattacccttcaaccgggttattctattccacttctagataga 324 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 63832 cattacagacgtatgatcattaccctttaaccgggttattctattccacttctagataga 63891 Query: 325 g 325 | Sbjct: 63892 g 63892
>gb|AY147725.1| Lomandra longifolia ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1269 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||| ||| ||||||||||| Sbjct: 60 gacgaaatgaaaaagacata 79
>gb|AY147721.1| Allium textile ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1260 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||| ||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcaagacatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147720.1| Xeronema callistemon ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1267 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaattgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147717.1| Phormium tenax ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1267 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 1 cattaccgcaagacatagaggggg-aggtcataagcgtctataccgtaaaatagattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||| ||| ||||||||||| Sbjct: 60 gacgtaatgaaaaagacata 79
>gb|AY147715.1| Lanaria lanata ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1269 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147711.1| Cyanastrum cordifolium ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1269 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147708.1| Blandfordia punicea ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1269 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147707.1| Astelia alpina ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1269 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147704.1| Xiphidium caeruleum ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1264 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147700.1| Philydrum lanuginosum ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1281 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagagggggg-ggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaataaaaaagacata 79
>gb|AY147699.1| Palisota bogneri ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1270 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatag-ggggggaggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaataaaaaagacata 79
>gb|AY147696.1| Ensete ventricosum ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1266 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcacggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147695.1| Dasypogon hookeri ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1266 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147692.1| Anticlea elegans ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1274 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147691.1| Stemona tuberosa ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1267 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY147687.1| Tofieldia glutinosa ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1270 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaataaaaaagacata 79
>gb|AY147686.1| Scheuchzeria palustris ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 1273 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY596708.1| Montinia caryophyllacea ribosomal protein L2 (rpl2) gene, partial cds; chloroplast Length = 588 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 490 atcattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattt 549 |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 1 atcattaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattt 59 Query: 550 tcgacggaatcaaaaagaca 569 || ||||||| ||||||||| Sbjct: 60 tcaacggaatgaaaaagaca 79
>gb|AY116659.1| Trimenia moorei ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1283 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 1 cattacggcaaggcatagagggggg-ggtcataagcgtctatatcgtaaaatagattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaataaaaaagacata 79
>gb|AY116647.1| Ascarina lucida ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1273 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AF235047.1|AF235047 Amborella trichopoda ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1256 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagagggggg-ggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AF123798.1|AF123798 Trochodendron araliodes ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1278 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AF123795.1|AF123795 Lactoris fernandeziana ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1294 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaattgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AF123786.1|AF123786 Asarum canadense ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1269 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AF123785.1|AF123785 Acorus calamus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1273 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaataaaaaagacata 79
>gb|AY007498.1| Schisandra chinensis ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1267 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtttataccgtaaaatagattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| ||||||||||| Sbjct: 60 gacggaatgaaaaagacata 79
>gb|AY007493.1| Lilium superbum ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1278 Score = 111 bits (56), Expect = 3e-21 Identities = 75/80 (93%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 492 cattaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttc 551 |||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 1 cattaccgcagggcatagaggggg-aggtcataagcgtctataccgtaaaatagattttc 59 Query: 552 gacggaatcaaaaagacata 571 |||||||| | ||||||||| Sbjct: 60 gacggaatgataaagacata 79
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 513 ggggaggtcataagcgcctataccgtaaaatagattttcgacggaatcaaaaagacata 571 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 123576 ggggaggtcataagcgcctataccgtaaaatcgattttcgacggaatcaaaaagacata 123634
>gb|AF123788.1|AF123788 Calycanthus floridus ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1264 Score = 109 bits (55), Expect = 1e-20 Identities = 71/75 (94%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 497 ccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcgacgg 556 ||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| Sbjct: 1 ccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatcgattttcgacgg 59 Query: 557 aatcaaaaagacata 571 ||| ||||||||||| Sbjct: 60 aatgaaaaagacata 74
>gb|AY007488.1| Arabidopsis thaliana ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product Length = 1266 Score = 109 bits (55), Expect = 1e-20 Identities = 74/79 (93%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 493 attaccgcaaggcatagaggggggaggtcataagcgcctataccgtaaaatagattttcg 552 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 2 attaccgcaaggcatagaggggg-aggtcataagcgtctataccgtaaaatagattttcg 60 Query: 553 acggaatcaaaaagacata 571 ||| ||| |||||||||| Sbjct: 61 acgaaatgcaaaagacata 79 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,646,173 Number of Sequences: 3902068 Number of extensions: 4646173 Number of successful extensions: 83042 Number of sequences better than 10.0: 373 Number of HSP's better than 10.0 without gapping: 391 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 80928 Number of HSP's gapped (non-prelim): 1646 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
