Clone Name | basd2d11 |
---|---|
Clone Library Name | barley_pub |
>OSR8_ORYSA (Q9LRI7) Hydrophobic protein OSR8| Length = 72 Score = 122 bits (306), Expect = 5e-28 Identities = 58/70 (82%), Positives = 62/70 (88%) Frame = +3 Query: 63 ASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVALGSE 242 + R CTFLEIL AIILPPLGVFLRFGCCSMEFCICLLLTILGY+PGIIYAVYVLVAL S+ Sbjct: 3 SGRCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSD 62 Query: 243 DRDRDYDTLA 272 R+Y TLA Sbjct: 63 QYQREYHTLA 72
>RC23_ARATH (Q9M095) Hypothetical UPF0057 protein At4g30650| Length = 73 Score = 84.3 bits (207), Expect = 1e-16 Identities = 40/56 (71%), Positives = 47/56 (83%) Frame = +3 Query: 60 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLV 227 MAS F EIL AI+LPPLGV L+ GCC++EF ICL+LTILGYIPGIIYA+YV+V Sbjct: 1 MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIV 56
>LT02_HORVU (Q9ARD5) Low temperature-induced protein lt101.2| Length = 54 Score = 82.4 bits (202), Expect = 5e-16 Identities = 40/53 (75%), Positives = 48/53 (90%) Frame = +3 Query: 72 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVA 230 S TF+E++ AIILPP+GVFLR+G ++EF ICLLLT+LGYIPGIIYAVYVLVA Sbjct: 3 SATFIEVILAIILPPVGVFLRYGL-AVEFWICLLLTLLGYIPGIIYAVYVLVA 54
>RCI2A_ARATH (Q9ZNQ7) Hydrophobic protein RCI2A (Low temperature and| salt-responsive protein LTI6A) Length = 54 Score = 80.5 bits (197), Expect = 2e-15 Identities = 37/51 (72%), Positives = 46/51 (90%) Frame = +3 Query: 72 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVL 224 + TF++I+ AI+LPPLGVFLRFGC +EF ICL+LT+LGYIPGIIYA+YVL Sbjct: 3 TATFVDIIIAILLPPLGVFLRFGC-GVEFWICLVLTLLGYIPGIIYAIYVL 52
>RC24_ARATH (Q9SUI0) Hypothetical UPF0057 protein At4g30660| Length = 74 Score = 79.7 bits (195), Expect = 3e-15 Identities = 38/64 (59%), Positives = 49/64 (76%), Gaps = 1/64 (1%) Frame = +3 Query: 72 SCTFL-EILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVALGSEDR 248 +C L EI+ AI+LPPLGV R GCC++EF ICL+LTILGY+PGIIYA+YV+V E+ Sbjct: 4 NCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHREEY 63 Query: 249 DRDY 260 +Y Sbjct: 64 FDEY 67
>RCI2B_ARATH (Q9ZNS6) Hydrophobic protein RCI2B (Low temperature and| salt-responsive protein LTI6B) Length = 54 Score = 76.6 bits (187), Expect = 3e-14 Identities = 33/51 (64%), Positives = 45/51 (88%) Frame = +3 Query: 72 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVL 224 + TF+EI+ AIILPPLGVFL+FGC +EF ICL+LT+ GY+PGI+YA+Y++ Sbjct: 3 TATFVEIILAIILPPLGVFLKFGC-KVEFWICLILTLFGYLPGILYALYII 52
>RC22_ARATH (O82232) Hypothetical UPF0057 protein At2g24040| Length = 75 Score = 76.3 bits (186), Expect = 4e-14 Identities = 36/67 (53%), Positives = 47/67 (70%) Frame = +3 Query: 60 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVALGS 239 MAS EI AI+LPP+GV LR GCC++EF ICL+LT LGY+PGIIYA+Y + L Sbjct: 1 MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60 Query: 240 EDRDRDY 260 ++ +Y Sbjct: 61 DEYFDEY 67
>LT01_HORVU (P68179) Low temperature-induced protein lt101.1 (Blt101)| (Blt101.1) Length = 54 Score = 76.3 bits (186), Expect = 4e-14 Identities = 39/52 (75%), Positives = 44/52 (84%) Frame = +3 Query: 72 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLV 227 S T LE++ AIILPP+GVFLR+ +EF ICLLLTILGYIPGIIYAVYVLV Sbjct: 3 SATVLEVILAIILPPVGVFLRYKL-GVEFWICLLLTILGYIPGIIYAVYVLV 53
>ESI3_LOPEL (P68178) Salt stress-induced hydrophobic peptide ESI3| Length = 54 Score = 76.3 bits (186), Expect = 4e-14 Identities = 39/52 (75%), Positives = 44/52 (84%) Frame = +3 Query: 72 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLV 227 S T LE++ AIILPP+GVFLR+ +EF ICLLLTILGYIPGIIYAVYVLV Sbjct: 3 SATVLEVILAIILPPVGVFLRYKL-GVEFWICLLLTILGYIPGIIYAVYVLV 53
>LTI6A_ORYSA (Q8H5T6) Hydrophobic protein LTI6A (Low temperature-induced protein| 6A) Length = 56 Score = 74.7 bits (182), Expect = 1e-13 Identities = 35/55 (63%), Positives = 44/55 (80%) Frame = +3 Query: 60 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVL 224 MA + T ++I+ AIILPPLGVF +FGC +EF ICLLLT GY+PGIIYAV+V+ Sbjct: 1 MADSTATCIDIILAIILPPLGVFFKFGC-GIEFWICLLLTFFGYLPGIIYAVWVI 54
>LTI6B_ORYSA (Q6AT93) Hydrophobic protein LTI6B (Low temperature-induced protein| 6B) Length = 55 Score = 73.6 bits (179), Expect = 2e-13 Identities = 35/47 (74%), Positives = 40/47 (85%) Frame = +3 Query: 84 LEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVL 224 ++IL AIILPPLGVFL+FGC EF ICLLLT LGYIPGIIYA+Y + Sbjct: 8 IDILIAIILPPLGVFLKFGC-GHEFWICLLLTFLGYIPGIIYAIYAI 53
>RC21_ARATH (Q9FE70) Hypothetical UPF0057 protein At1g57550| Length = 52 Score = 67.8 bits (164), Expect = 1e-11 Identities = 30/49 (61%), Positives = 41/49 (83%) Frame = +3 Query: 78 TFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVL 224 +FLE+L AI +PP+GVFLR+G +EF +CLLLT+ +IPG+IYA+YVL Sbjct: 3 SFLEVLCAIFIPPVGVFLRYGL-GLEFWVCLLLTLFAFIPGLIYAIYVL 50
>YCU4_CAEEL (Q22701) Hypothetical UPF0057 protein T23F2.4 in chromosome X| Length = 57 Score = 65.5 bits (158), Expect = 7e-11 Identities = 30/48 (62%), Positives = 39/48 (81%) Frame = +3 Query: 87 EILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVA 230 + LFA++LPP+GVFL GC + IC+LLTILGYIPGIIYA Y+++A Sbjct: 10 KFLFALLLPPVGVFLEKGC-THHLAICILLTILGYIPGIIYACYIILA 56
>YCU3_CAEEL (Q22700) Hypothetical UPF0057 protein T23F2.3 in chromosome X| Length = 57 Score = 63.5 bits (153), Expect = 2e-10 Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%) Frame = +3 Query: 72 SCTFL-EILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVA 230 +CT + + + A++LPP+GVFL GC IC+LLTILGYIPGIIYA YV++A Sbjct: 4 TCTDIPKFICAVLLPPIGVFLEKGC-DYHLAICILLTILGYIPGIIYACYVILA 56
>YCU5_CAEEL (Q22702) Hypothetical UPF0057 protein T23F2.5 in chromosome X| Length = 57 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 1/54 (1%) Frame = +3 Query: 72 SCTFL-EILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVA 230 +CT + + L A++LPP+GV+L GC + I +LLTILGYIPGII+A YV++A Sbjct: 4 TCTDIPKFLCALLLPPIGVWLEKGC-TYHLAINILLTILGYIPGIIHACYVILA 56
>Y567_PSEAE (Q9I5W9) Hypothetical UPF0057 protein PA0567| Length = 52 Score = 55.8 bits (133), Expect = 5e-08 Identities = 27/47 (57%), Positives = 37/47 (78%) Frame = +3 Query: 84 LEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVL 224 + IL AI+LPPLGVFL+ G F + +LLT+LGYIPGI++AVY++ Sbjct: 4 IRILIAILLPPLGVFLQVGFGGA-FWLNILLTLLGYIPGIVHAVYII 49
>RIC1_PHYIN (Q9Y068) Protein Ric1| Length = 57 Score = 55.5 bits (132), Expect = 7e-08 Identities = 23/46 (50%), Positives = 37/46 (80%) Frame = +3 Query: 90 ILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLV 227 ++ ++I+PP+GVF + GC + + I LLT+LGYIPG+I+AVY+L+ Sbjct: 11 LICSVIIPPVGVFFQVGC-TKDLAINCLLTVLGYIPGVIHAVYILI 55
>SNA4_YEAST (Q07549) Protein SNA4| Length = 140 Score = 49.3 bits (116), Expect = 5e-06 Identities = 23/60 (38%), Positives = 38/60 (63%) Frame = +3 Query: 81 FLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVALGSEDRDRDY 260 F+ + A PP V LR G CS +F + +LLT+LG++PG+++A Y + + S R+ +Y Sbjct: 13 FILYIVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFY-YITITSPLRNAEY 71
>YQAE_ECOLI (P0AE42) Hypothetical UPF0057 protein yqaE| Length = 52 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/47 (55%), Positives = 32/47 (68%) Frame = +3 Query: 81 FLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYV 221 F I+ IILPPLGV L G F I +LLT+LGYIPG+I+A +V Sbjct: 3 FWRIVITIILPPLGVLLGKGF-GWAFIINILLTLLGYIPGLIHAFWV 48
>YQAE_ECOL6 (P0AE43) Hypothetical UPF0057 protein yqaE| Length = 52 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/47 (55%), Positives = 32/47 (68%) Frame = +3 Query: 81 FLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYV 221 F I+ IILPPLGV L G F I +LLT+LGYIPG+I+A +V Sbjct: 3 FWRIVITIILPPLGVLLGKGF-GWAFIINILLTLLGYIPGLIHAFWV 48
>YQAE_ECO57 (P0AE44) Hypothetical UPF0057 protein yqaE| Length = 52 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/47 (55%), Positives = 32/47 (68%) Frame = +3 Query: 81 FLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYV 221 F I+ IILPPLGV L G F I +LLT+LGYIPG+I+A +V Sbjct: 3 FWRIVITIILPPLGVLLGKGF-GWAFIINILLTLLGYIPGLIHAFWV 48
>YOT0_CAEEL (P34655) Hypothetical UPF0057 protein ZK632.10 in chromosome III| Length = 80 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/51 (47%), Positives = 33/51 (64%) Frame = +3 Query: 75 CTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLV 227 C L + AI LPP+ V L GC + + I +LLT LG IPGII+A Y+++ Sbjct: 2 CQILLAILAIFLPPIAVLLDVGC-NCDLLINILLTCLGIIPGIIHAWYIIL 51
>SNA2_YEAST (P56508) Protein SNA2| Length = 79 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = +3 Query: 90 ILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVALGSEDRDRDYDTL 269 + AI +PPL V+L+ G + + I LL +LG+ PG+I+A+YV+ E+ + Y L Sbjct: 9 VFIAIFIPPLAVWLKRGFFTKDLLINFLLFLLGFFPGLIHALYVISCHPYEENEARYSHL 68 Query: 270 A 272 + Sbjct: 69 S 69
>Y1169_SYNY3 (P74805) Hypothetical UPF0057 protein ssr1169| Length = 54 Score = 46.2 bits (108), Expect = 4e-05 Identities = 25/48 (52%), Positives = 37/48 (77%), Gaps = 1/48 (2%) Frame = +3 Query: 84 LEILFAIILPPLGVFLRFGCCSMEFCICLLLTILG-YIPGIIYAVYVL 224 ++I+ AI+LPPLGVFL+ G +F I LLLTI G YI G+++A++V+ Sbjct: 4 VKIICAILLPPLGVFLQVG-IGKDFWINLLLTIFGLYILGLVHAIWVI 50
>YAM5_CAEEL (Q17638) Hypothetical UPF0057 protein C04G6.5 in chromosome II| Length = 59 Score = 43.5 bits (101), Expect = 3e-04 Identities = 18/54 (33%), Positives = 33/54 (61%) Frame = +3 Query: 60 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYV 221 MA+ + +E++ I LPPL ++ C + I ++ +L ++PGI+YAVY+ Sbjct: 1 MATDADVIIEVILCIFLPPLAIWWHTKECDINVLIDIIFCLLFWLPGILYAVYI 54
>PMP3_YEAST (P87284) Plasma membrane proteolipid 3| Length = 55 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/52 (34%), Positives = 34/52 (65%) Frame = +3 Query: 72 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLV 227 S + I+ ++ LPP+ VFL G + + ++LTIL + PG++YA+Y+++ Sbjct: 3 SAKIINIILSLFLPPVAVFLARGW-GTDCIVDIILTILAWFPGMLYALYIVL 53
>YV31_CAEEL (Q20516) Hypothetical UPF0057 protein F47B7.1 in chromosome X| Length = 59 Score = 41.2 bits (95), Expect = 0.001 Identities = 16/53 (30%), Positives = 31/53 (58%) Frame = +3 Query: 60 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVY 218 MA +E++ AI LPPL +F+ C+M + ++L ++P +I+A++ Sbjct: 1 MAIEMQQIIELILAIFLPPLAIFIHGNDCNMHVAVNIILCFFFFVPAVIHALW 53
>YC19_SCHPO (O74837) Hypothetical UPF0057 protein C1183.09c in chromosome III| Length = 105 Score = 39.7 bits (91), Expect = 0.004 Identities = 20/49 (40%), Positives = 33/49 (67%) Frame = +3 Query: 81 FLEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLV 227 FL I+ + +P + V +R G C+ +F I + L LG IPGII+A+Y+++ Sbjct: 9 FLLIVLSFFVPFIVVGIRRGFCTADFLINICLCALG-IPGIIHAIYIVI 56
>SNA3_YEAST (P14359) Protein SNA3| Length = 133 Score = 39.3 bits (90), Expect = 0.005 Identities = 22/60 (36%), Positives = 35/60 (58%) Frame = +3 Query: 84 LEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLVALGSEDRDRDYD 263 L ++ A+ +PP+ V+ R G + + + LLL +L + P II+A YV+ SE R YD Sbjct: 23 LLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYETSSE---RSYD 79
>PMP3_CANAL (Q9P824) Plasma membrane proteolipid 3 homolog| Length = 55 Score = 37.7 bits (86), Expect = 0.015 Identities = 18/48 (37%), Positives = 32/48 (66%) Frame = +3 Query: 84 LEILFAIILPPLGVFLRFGCCSMEFCICLLLTILGYIPGIIYAVYVLV 227 +E++ AI LPP+ VF++ G + I L+L I + P I++A+YV++ Sbjct: 7 IEVIIAIFLPPVAVFMKCG-ATTPLWINLVLCIFIWFPAILHALYVVL 53
>SYA_METAC (Q8TU79) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 925 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = -1 Query: 278 CLSKGVVVPIAVLRAER-DEHVDRVDDAGDVA 186 CLS GV+ PI +L+ ER + V+RV+ A +A Sbjct: 719 CLSTGVIGPIKILKTERIQDGVERVEFAAGIA 750
>NCLN_BRARE (Q6NZ07) Nicalin-1 precursor (Nicastrin-like protein 1)| Length = 572 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -1 Query: 395 HLQTHRKKARHRVHMETHSVDSQLPGEGLITHRIRAVAGCLSKGVVV 255 HL++HR ARH + M+ SV L G G T G LS+ V Sbjct: 380 HLESHRSPARHSI-MDMRSVSPSLEGAGEATTGPHVDLGKLSRNTKV 425
>NCKX6_MOUSE (Q925Q3) Sodium/potassium/calcium exchanger 6 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 6) (Solute carrier family 24 member 6) Length = 585 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = +3 Query: 24 VEISPDPIRDLPMASRSCTFLEILFAIILPPLGVFL---RFGCCSMEFCICLLLTILGYI 194 VE+ +P L S L ++F+++ PL F +G C + F IC L+ +L Sbjct: 517 VEVKLEPDGLLVWVLASALGLSLIFSLVSVPLQCFQLSKAYGLCLLLFYICFLVVVLLTE 576 Query: 195 PGIIY 209 G+I+ Sbjct: 577 FGVIH 581
>RS8E_METTH (O26309) 30S ribosomal protein S8e| Length = 127 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -2 Query: 142 QPKRRKTPSGGRMMANRISRKVQLRDAIGRSRIGSGEI 29 Q K K PSGGR NR RK +L ++IG + Sbjct: 5 QGKSMKKPSGGRAKMNRGKRKYELGREPAETKIGDRRV 42
>DPP6_MOUSE (Q9Z218) Dipeptidyl aminopeptidase-like protein 6| (Dipeptidylpeptidase VI) (Dipeptidylpeptidase 6) (Dipeptidyl peptidase IV-like protein) (Dipeptidyl aminopeptidase-related protein) (DPPX) Length = 804 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -2 Query: 415 GKPDGLSIYRLTERRHATESIWKHTASIRNCQARGSSRTGYELLQDV*ARV 263 G P S+ E T + H A + C RGS G +LLQ+V R+ Sbjct: 569 GTPGSQSVTERFEVTWETVLVSSHGAVVVKCDGRGSGFQGTKLLQEVRRRL 619 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,519,586 Number of Sequences: 219361 Number of extensions: 1100789 Number of successful extensions: 3633 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3488 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3615 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)