Clone Name
basd2d14
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Trit...
650
0.0
2 gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine de...
212
1e-51
3 gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence
194
3e-46
4 emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine deca...
186
6e-44
5 gb|AY103590.1| Zea mays PCO098412 mRNA sequence
186
6e-44
6 gb|BT016840.1| Zea mays clone Contig673 mRNA sequence
178
2e-41
7 emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine de...
165
2e-37
8 dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clon...
165
2e-37
9 dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clon...
165
2e-37
10 dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clon...
165
2e-37
11 dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clon...
165
2e-37
12 emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon...
135
2e-28
13 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
135
2e-28
14 emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...
135
2e-28
15 emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,...
135
2e-28
16 emb|AJ252213.1|OSA252213 Oryza sativa partial adometDC1 gene for...
127
5e-26
17 gb|BT013082.1| Lycopersicon esculentum clone 114340R, mRNA sequence
117
5e-23
18 gb|AY103940.1| Zea mays PCO064624 mRNA sequence
109
1e-20
19 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
105
2e-19
20 dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic D...
105
2e-19
21 dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1 g...
105
2e-19
22 dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clon...
105
2e-19
23 dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clon...
105
2e-19
24 dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clon...
105
2e-19
25 dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clon...
105
2e-19
26 ref|XM_506863.1| PREDICTED Oryza sativa (japonica cultivar-group...
100
1e-17
27 emb|Y07768.1|DSSADMEDC D.stramonium mRNA for S-adenosylmethionin...
100
1e-17
28 emb|AJ251899.1|OSA251899 Oryza sativa mRNA for S-adenosylmethion...
100
1e-17
29 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
100
1e-17
30 dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D...
100
1e-17
31 dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D...
100
1e-17
32 emb|AJ252214.1|OSA252214 Oryza sativa partial adometDC2 gene for...
100
1e-17
33 dbj|AK070269.1| Oryza sativa (japonica cultivar-group) cDNA clon...
100
1e-17
34 dbj|AK070259.1| Oryza sativa (japonica cultivar-group) cDNA clon...
100
1e-17
35 ref|XM_466676.1| Oryza sativa (japonica cultivar-group), mRNA
96
2e-16
36 dbj|AK062133.1| Oryza sativa (japonica cultivar-group) cDNA clon...
96
2e-16
37 gb|AY536644.1| Brassica juncea S-adenosylmethionine decarboxylas...
94
7e-16
38 gb|AF321141.1|AF321141S1 Nicotiana tabacum S-adenosylmethionine ...
90
1e-14
39 gb|AY232672.1| Narcissus pseudonarcissus S-adenosylmethionine de...
90
1e-14
40 ref|NM_001035545.1| Arabidopsis thaliana SAMDC (S-ADENOSYLMETHIO...
82
3e-12
41 ref|NM_111114.2| Arabidopsis thaliana SAMDC (S-ADENOSYLMETHIONIN...
82
3e-12
42 gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
82
3e-12
43 gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC...
82
3e-12
44 emb|Y07765.1|ATSADMEDC A.thaliana gene encoding S-adenosylmethio...
82
3e-12
45 gb|AF428468.1|AF428468 Arabidopsis thaliana AT3g02470/F16B3_10 m...
82
3e-12
46 gb|AY054185.1| Arabidopsis thaliana AT3g02470/F16B3_10 mRNA, com...
82
3e-12
47 gb|AY042824.1| Arabidopsis thaliana S-adenosylmethionine decarbo...
82
3e-12
48 gb|U63633.1|ATU63633 Arabidopsis thaliana S-adenosylmethionine d...
82
3e-12
49 ref|XM_473046.1| Oryza sativa (japonica cultivar-group), predic...
80
1e-11
50 gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylme...
80
1e-11
51 gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarbo...
80
1e-11
52 gb|AY730047.1| Phaseolus vulgaris putative SAMDC uORF mRNA, comp...
76
2e-10
53 gb|S74514.1| S-adenosylmethionine decarboxylase [Solanum tuberos...
72
3e-09
54 dbj|AB077442.2| Malus x domestica SAMDC mRNA for S-adenosylmethi...
70
1e-08
55 gb|AY491510.2| Daucus carota S-adenosylmethionine decarboxylase ...
68
4e-08
56 gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence
68
4e-08
57 gb|AY491511.1| Daucus carota S-adenosylmethionine decarboxylase ...
68
4e-08
58 emb|X95729.1|BJSAMDC1G B.juncea mRNA for S-adenosylmethionine de...
68
4e-08
59 gb|AF488307.1| Glycine max S-adenosylmethionine decarboxylase (S...
68
4e-08
60 gb|AF420239.1|AF420239 Dendrobium crumenatum S-adenosyl-L-methio...
68
4e-08
61 gb|AY444341.1| Brassica juncea S-adenosyl-L-methionine decarboxy...
68
4e-08
62 gb|AF334029.1|AF334029 Daucus carota S-adenosyl-methionine decar...
68
4e-08
63 gb|AF215665.1|AF215665 Brassica juncea S-adenosyl-L-methionine d...
68
4e-08
64 gb|U80916.1|BJU80916 Brassica juncea S-adenosyl-L-methionine dec...
68
4e-08
65 dbj|AB062360.1| Phaseolus lunatus SAMDC mRNA for S-adenosylmethi...
68
4e-08
66 gb|U12573.1|CRU12573 Catharanthus roseus S-adenosyl-L-methionine...
66
2e-07
67 emb|AJ704800.1| Prunus persica partial samdc gene for S-adenosyl...
62
2e-06
68 gb|AF033100.1|AF033100 Nicotiana tabacum S-adenosylmethionine de...
60
1e-05
69 gb|AY104070.1| Zea mays PCO115703 mRNA sequence
56
2e-04
70 ref|NM_001036811.1| Arabidopsis thaliana adenosylmethionine deca...
52
0.002
71 ref|NM_121600.2| Arabidopsis thaliana adenosylmethionine decarbo...
52
0.002
72 gb|BT013281.1| Lycopersicon esculentum clone 134862F, mRNA sequence
52
0.002
73 emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BA...
52
0.002
74 emb|AJ252212.1|ATH252212 Arabidopsis thaliana adometDC2 gene for...
52
0.002
75 emb|AJ251915.1|ATH251915 Arabidopsis thaliana mRNA for S-adenosy...
52
0.002
76 gb|U60592.1|PSU60592 Pisum sativum putative ORF; conserved in 5'...
52
0.002
77 gb|AF436825.1|AF436825 Arabidopsis thaliana AT5g15950/F1N13_90 m...
52
0.002
78 gb|U38527.1|DCU38527 Dianthus caryophyllus S-adenosylmethionine ...
52
0.002
79 emb|AJ567368.2|VVI567368 Vitis vinifera samdc gene for S-adenosy...
52
0.002
80 gb|BT013882.1| Lycopersicon esculentum clone 132862F, mRNA sequence
46
0.15
81 dbj|AB077441.2| Malus x domestica SAMDC mRNA for S-adenosylmethi...
46
0.15
82 gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
46
0.15
83 gb|U94786.1|DCU94786 Dianthus caryophyllus S-adenosylmethionine ...
46
0.15
84 gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14...
44
0.57
85 gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c...
44
0.57
86 gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome...
44
0.57
87 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
44
0.57
88 dbj|AK102034.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.57
89 dbj|AK099362.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.57
90 emb|CT573229.8| Zebrafish DNA sequence from clone DKEY-11D7 in l...
44
0.57
91 dbj|AK064360.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.57
92 tpe|BN000595.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr...
44
0.57
93 emb|AL137800.12| Human DNA sequence from clone RP1-127C7 on chro...
42
2.3
94 gb|AY741575.1| Uncultured sulfate-reducing bacterium clone PIMO3...
42
2.3
95 dbj|AK016582.1| Mus musculus adult male testis cDNA, RIKEN full-...
42
2.3
96 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
42
2.3
97 dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...
42
2.3
98 emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on ch...
42
2.3
99 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
42
2.3
100 emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa...
42
2.3
101 ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predic...
40
9.0
102 ref|NM_113454.2| Arabidopsis thaliana adenosylmethionine decarbo...
40
9.0
103 gb|AY421966.1| Cryptococcus gattii strain ATCC 32609 MAT-alpha m...
40
9.0
104 ref|XM_475588.1| Oryza sativa (japonica cultivar-group), predic...
40
9.0
105 gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
106 gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, comp...
40
9.0
107 gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
108 gb|AY022835.1| Oryza sativa microsatellite MRG5160 containing (C...
40
9.0
109 gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
110 gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
111 gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
112 gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom...
40
9.0
113 gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
114 gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1...
40
9.0
115 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
40
9.0
116 gb|AY339884.1| Zea mays WD40 repeat protein (mp1) gene, complete...
40
9.0
117 emb|CT025565.5| Mouse DNA sequence from clone RP24-126K5 on chro...
40
9.0
118 gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, comp...
40
9.0
119 gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, comp...
40
9.0
120 ref|NM_031220.1| Homo sapiens PITPNM family member 3 (PITPNM3), ...
40
9.0
121 emb|Z82204.1|HS362G17 Human DNA sequence from clone RP3-362G17 o...
40
9.0
122 gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, comp...
40
9.0
123 gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
124 gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete seq...
40
9.0
125 gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Hu...
40
9.0
126 gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen...
40
9.0
127 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.0
128 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.0
129 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.0
130 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.0
131 emb|BX823121.1|CNS0A7A6 Arabidopsis thaliana Full-length cDNA Co...
40
9.0
132 gb|AF334586.1|AF334586 Homo sapiens NIR1 mRNA, complete cds
40
9.0
133 gb|AC154337.2| Mus musculus BAC clone RP23-254P20 from chromosom...
40
9.0
134 gb|AC011238.8| Homo sapiens BAC clone RP11-374C5 from 2, complet...
40
9.0
135 dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.0
136 dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.0
137 dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.0
138 dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D...
40
9.0
139 dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
40
9.0
140 dbj|AK121556.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.0
141 gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31,...
40
9.0
142 gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, ...
40
9.0
143 dbj|AK106389.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.0
144 dbj|AK105900.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.0
145 dbj|AK067998.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.0
146 dbj|AK065299.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.0
147 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
148 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
149 dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone...
40
9.0
150 gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
151 emb|AL669981.11| Mouse DNA sequence from clone RP23-335B9 on chr...
40
9.0
152 gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome...
40
9.0
>emb| X83881.1 |HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for
S-adenosylmethionine decarboxylase
Length = 1893
Score = 650 bits (328), Expect = 0.0
Identities = 378/392 (96%), Gaps = 2/392 (0%)
Strand = Plus / Plus
Query: 89 actcgtcgggagggctcgagatctgtgtcgggagaggggggaattcttgagatcggaacc 148
|||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |
Sbjct: 65 actcgtcgggagagctcgagatctgtgccgggagagggggga-ttcttgagatcggaatc 123
Query: 149 ggaacaagtgggcgcgctcgggaaggggttaccataccaatttttcccaggaacccttag 208
||| |||| | ||||||||||||||||||||||||| ||| |||||||||||| ||||||
Sbjct: 124 ggatcaagcgtgcgcgctcgggaaggggttaccataacaaattttcccaggaatccttag 183
Query: 209 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgt 268
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 184 tgaatgttctaatggagtcaaagggtggcaagaagtctagcagtagtagttccctgatgt 243
Query: 269 acgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagt 328
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 244 acgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgccaagaagt 303
Query: 329 tttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 388
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 304 tttctgctgcatactcaaactgcgcgaagaagccatcctgatatcgtttttggc-ttccc 362
Query: 389 cttcccgtagtttaggatttttatgcaattttattctgactcttttctcccaccaatctc 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cttcccgtagtttaggatttttatgcaattttattctgactcttttctcccaccaatctc 422
Query: 449 tctggcttgctgcttcacgataatcgaccagt 480
||||||||||||||||||||||||||||||||
Sbjct: 423 tctggcttgctgcttcacgataatcgaccagt 454
Score = 180 bits (91), Expect = 4e-42
Identities = 121/131 (92%)
Strand = Plus / Plus
Query: 524 actcaaactgcaacaatggccgccccgacctctgcgatcgggtttgagggctacgagaag 583
|||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 498 actcaaactgcaacaatggctgccccggtctcagcgatcgggtttgagggctacgagaag 557
Query: 584 cgcctcgagatcaccttcaacgaggcatcaatctttgctgaccctcatggtcgtggcctg 643
|||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 558 cgcctcgagatcaccttctctgaggcatcaatcttcgccgaccctcatggtcgtggcctg 617
Query: 644 cgcgccctctc 654
|| ||||||||
Sbjct: 618 cgtgccctctc 628
Score = 44.1 bits (22), Expect = 0.57
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 accgcctcgccgccgccaccgcagcc 55
|||| |||||||||||||||||||||
Sbjct: 10 accgtctcgccgccgccaccgcagcc 35
>gb| AF117660.1 |AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor,
mRNA, complete cds
Length = 1386
Score = 212 bits (107), Expect = 1e-51
Identities = 125/131 (95%)
Strand = Plus / Plus
Query: 524 actcaaactgcaacaatggccgccccgacctctgcgatcgggtttgagggctacgagaag 583
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actcgaactgcaacaatggctgccccgacctctgcgatcgggtttgagggctacgagaag 120
Query: 584 cgcctcgagatcaccttcaacgaggcatcaatctttgctgaccctcatggtcgtggcctg 643
|||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 cgcctcaagatcaccttctccgaggcatcaatctttgccgaccctcatggtcgtggcctg 180
Query: 644 cgcgccctctc 654
|||||||||||
Sbjct: 181 cgcgccctctc 191
>gb| BT018615.1 | Zea mays clone EL01N0501D02.d mRNA sequence
Length = 2057
Score = 194 bits (98), Expect = 3e-46
Identities = 175/200 (87%), Gaps = 3/200 (1%)
Strand = Plus / Plus
Query: 212 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 271
|||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct: 217 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttccatgatgtatg 276
Query: 272 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 329
|||||||||| |||||||||||||| ||||||||||| || ||||||| ||||||||
Sbjct: 277 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 336
Query: 330 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 388
|||||||| || || |||||||||||||||||||||||||||| ||||||||| | |
Sbjct: 337 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 396
Query: 389 cttcccgtagtttaggattt 408
||| ||||||||||||||
Sbjct: 397 attctagtagtttaggattt 416
Score = 69.9 bits (35), Expect = 1e-08
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 560 atcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatcttt 619
||||||||||||||||| ||||||||||| |||||||| ||| |||||| | |||||
Sbjct: 588 atcgggtttgagggctatgagaagcgccttgagatcacattctctgaggcacctgtcttt 647
Query: 620 gctgaccctcatggtcgtggcctgcgcgccctctc 654
| ||||||||||| ||||| |||| ||||||||
Sbjct: 648 gtggaccctcatgggcgtggtttgcgtgccctctc 682
Score = 58.0 bits (29), Expect = 4e-05
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 440 accaatctctctggcttgctgcttcacgataatcgaccagt 480
||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 439 accaatctctctggcctgctgcttcctgataatcgaccagt 479
>emb| Y07767.1 |ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase
Length = 1873
Score = 186 bits (94), Expect = 6e-44
Identities = 174/200 (87%), Gaps = 3/200 (1%)
Strand = Plus / Plus
Query: 212 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 271
|||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| |
Sbjct: 38 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttctatgatgtatg 97
Query: 272 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 329
|||||||||| |||||||||||||| ||||||||||| || ||||||| ||||||||
Sbjct: 98 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 157
Query: 330 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 388
|||||||| || || |||||||||||||||||||||||||||| ||||||||| | |
Sbjct: 158 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 217
Query: 389 cttcccgtagtttaggattt 408
||| ||||||||||||||
Sbjct: 218 attctagtagtttaggattt 237
Score = 69.9 bits (35), Expect = 1e-08
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 560 atcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatcttt 619
||||||||||||||||| ||||||||||| |||||||| ||| |||||| | |||||
Sbjct: 409 atcgggtttgagggctatgagaagcgccttgagatcacattctctgaggcacctgtcttt 468
Query: 620 gctgaccctcatggtcgtggcctgcgcgccctctc 654
| ||||||||||| ||||| |||| ||||||||
Sbjct: 469 gtggaccctcatgggcgtggtttgcgtgccctctc 503
Score = 58.0 bits (29), Expect = 4e-05
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 440 accaatctctctggcttgctgcttcacgataatcgaccagt 480
||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 260 accaatctctctggcctgctgcttcctgataatcgaccagt 300
>gb| AY103590.1 | Zea mays PCO098412 mRNA sequence
Length = 2400
Score = 186 bits (94), Expect = 6e-44
Identities = 174/200 (87%), Gaps = 3/200 (1%)
Strand = Plus / Plus
Query: 212 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 271
|||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| |
Sbjct: 287 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttctatgatgtatg 346
Query: 272 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 329
|||||||||| |||||||||||||| ||||||||||| || ||||||| ||||||||
Sbjct: 347 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 406
Query: 330 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 388
|||||||| || || |||||||||||||||||||||||||||| ||||||||| | |
Sbjct: 407 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 466
Query: 389 cttcccgtagtttaggattt 408
||| ||||||||||||||
Sbjct: 467 attctagtagtttaggattt 486
Score = 69.9 bits (35), Expect = 1e-08
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 560 atcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatcttt 619
||||||||||||||||| ||||||||||| |||||||| ||| |||||| | |||||
Sbjct: 658 atcgggtttgagggctatgagaagcgccttgagatcacattctctgaggcacctgtcttt 717
Query: 620 gctgaccctcatggtcgtggcctgcgcgccctctc 654
| ||||||||||| ||||| |||| ||||||||
Sbjct: 718 gtggaccctcatgggcgtggtttgcgtgccctctc 752
Score = 58.0 bits (29), Expect = 4e-05
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 440 accaatctctctggcttgctgcttcacgataatcgaccagt 480
||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 509 accaatctctctggcctgctgcttcctgataatcgaccagt 549
>gb| BT016840.1 | Zea mays clone Contig673 mRNA sequence
Length = 1866
Score = 178 bits (90), Expect = 2e-41
Identities = 173/200 (86%), Gaps = 3/200 (1%)
Strand = Plus / Minus
Query: 212 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 271
|||| ||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| |
Sbjct: 1860 atgtactaatggagtctaagggtggcataaagactagcagtagtcgttccatgatgtatg 1801
Query: 272 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 329
|||||||||| |||||||||||||| ||||||||||| || ||||||| ||||||||
Sbjct: 1800 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 1741
Query: 330 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 388
|||||||| || || |||||||||||||||||||||||||||| ||||||||| | |
Sbjct: 1740 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 1681
Query: 389 cttcccgtagtttaggattt 408
||| ||||||||||||||
Sbjct: 1680 attctagtagtttaggattt 1661
Score = 69.9 bits (35), Expect = 1e-08
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 560 atcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatcttt 619
||||||||||||||||| ||||||||||| |||||||| ||| |||||| | |||||
Sbjct: 1489 atcgggtttgagggctatgagaagcgccttgagatcacattctctgaggcacctgtcttt 1430
Query: 620 gctgaccctcatggtcgtggcctgcgcgccctctc 654
| ||||||||||| ||||| |||| ||||||||
Sbjct: 1429 gtggaccctcatgggcgtggtttgcgtgccctctc 1395
Score = 58.0 bits (29), Expect = 4e-05
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 440 accaatctctctggcttgctgcttcacgataatcgaccagt 480
||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 1638 accaatctctctggcctgctgcttcctgataatcgaccagt 1598
>emb| Y07766.2 |OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase
Length = 2036
Score = 165 bits (83), Expect = 2e-37
Identities = 150/171 (87%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 192 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 251
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 252 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 311
Query: 324 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 371
|||||| |||||||| || || ||||||||||||||||||||||||||
Sbjct: 312 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 362
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 585 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 644
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 645 gaccctgatggtcggggtttgcgcgccctctc 676
>dbj| AK100589.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full
insert sequence
Length = 2063
Score = 165 bits (83), Expect = 2e-37
Identities = 150/171 (87%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355
Query: 324 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 371
|||||| |||||||| || || ||||||||||||||||||||||||||
Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 629 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 688
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 689 gaccctgatggtcggggtttgcgcgccctctc 720
>dbj| AK098918.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full
insert sequence
Length = 2059
Score = 165 bits (83), Expect = 2e-37
Identities = 150/171 (87%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355
Query: 324 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 371
|||||| |||||||| || || ||||||||||||||||||||||||||
Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 629 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 688
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 689 gaccctgatggtcggggtttgcgcgccctctc 720
>dbj| AK072162.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full
insert sequence
Length = 2711
Score = 165 bits (83), Expect = 2e-37
Identities = 150/171 (87%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355
Query: 324 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 371
|||||| |||||||| || || ||||||||||||||||||||||||||
Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 629 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 688
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 689 gaccctgatggtcggggtttgcgcgccctctc 720
>dbj| AK067166.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full
insert sequence
Length = 2063
Score = 165 bits (83), Expect = 2e-37
Identities = 150/171 (87%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355
Query: 324 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 371
|||||| |||||||| || || ||||||||||||||||||||||||||
Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 629 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 688
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 689 gaccctgatggtcggggtttgcgcgccctctc 720
>emb| AL606594.4 | Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
complete sequence
Length = 173171
Score = 135 bits (68), Expect = 2e-28
Identities = 112/126 (88%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 12050 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 12109
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 12110 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 12169
Query: 324 gaagtt 329
||||||
Sbjct: 12170 gaagtt 12175
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 12526 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 12585
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 12586 gaccctgatggtcggggtttgcgcgccctctc 12617
Score = 46.1 bits (23), Expect = 0.15
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 349 tgcgcgaagaagccatcctgata 371
|||||||||||||||||||||||
Sbjct: 12281 tgcgcgaagaagccatcctgata 12303
>dbj| AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 135 bits (68), Expect = 2e-28
Identities = 112/126 (88%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 24891465 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 24891524
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 24891525 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 24891584
Query: 324 gaagtt 329
||||||
Sbjct: 24891585 gaagtt 24891590
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 24891941 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 24892000
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 24892001 gaccctgatggtcggggtttgcgcgccctctc 24892032
Score = 46.1 bits (23), Expect = 0.15
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 349 tgcgcgaagaagccatcctgata 371
|||||||||||||||||||||||
Sbjct: 24891696 tgcgcgaagaagccatcctgata 24891718
>emb| AL442115.2 | Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
sequence
Length = 148644
Score = 135 bits (68), Expect = 2e-28
Identities = 112/126 (88%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 12079 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 12138
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 12139 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 12198
Query: 324 gaagtt 329
||||||
Sbjct: 12199 gaagtt 12204
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 12555 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 12614
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 12615 gaccctgatggtcggggtttgcgcgccctctc 12646
Score = 46.1 bits (23), Expect = 0.15
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 349 tgcgcgaagaagccatcctgata 371
|||||||||||||||||||||||
Sbjct: 12310 tgcgcgaagaagccatcctgata 12332
>emb| AL606627.3 |OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
complete sequence
Length = 170765
Score = 135 bits (68), Expect = 2e-28
Identities = 112/126 (88%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 153181 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 153240
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 153241 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 153300
Query: 324 gaagtt 329
||||||
Sbjct: 153301 gaagtt 153306
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 153657 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 153716
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 153717 gaccctgatggtcggggtttgcgcgccctctc 153748
Score = 46.1 bits (23), Expect = 0.15
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 349 tgcgcgaagaagccatcctgata 371
|||||||||||||||||||||||
Sbjct: 153412 tgcgcgaagaagccatcctgata 153434
>emb| AJ252213.1 |OSA252213 Oryza sativa partial adometDC1 gene for S-adenosylmethionine
decarboxylase 1, exons 1-3
Length = 2036
Score = 127 bits (64), Expect = 5e-26
Identities = 111/126 (88%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 1097 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 1156
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 323
|||||| | ||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 1157 gatgtatgtagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 1216
Query: 324 gaagtt 329
||||||
Sbjct: 1217 gaagtt 1222
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 1573 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 1632
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 1633 gaccctgatggtcggggtttgcgcgccctctc 1664
Score = 46.1 bits (23), Expect = 0.15
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 349 tgcgcgaagaagccatcctgata 371
|||||||||||||||||||||||
Sbjct: 1328 tgcgcgaagaagccatcctgata 1350
>gb| BT013082.1 | Lycopersicon esculentum clone 114340R, mRNA sequence
Length = 380
Score = 117 bits (59), Expect = 5e-23
Identities = 94/105 (89%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 208 gtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctg 264
||||||| ||||||||||||||| ||||| |||||| ||||| |||||||||||| |
Sbjct: 152 gtgaatgatctaatggagtcaaaaggtggtaaaaagaagtctagtagtagtagttcctta 211
Query: 265 atgtacgaagctcccctcggctacagcattgaagacgttcgacca 309
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttttacgaagctcccctcggctacagcattgaagacgttcgacca 256
>gb| AY103940.1 | Zea mays PCO064624 mRNA sequence
Length = 2008
Score = 109 bits (55), Expect = 1e-20
Identities = 143/171 (83%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 209 tgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---c 262
||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |
Sbjct: 208 tgaatgttctaatggagtccaagggtggcaagaagaagtctagcagtagtcgttcctccc 267
Query: 263 tgatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaa 322
||||||||||||||||||| ||||||||||| || || | || || || || ||| |
Sbjct: 268 tgatgtacgaagctccccttggctacagcatcgaggatatccgccctgcaggcggcatca 327
Query: 323 agaagttttctgctgcatattcaaactgcgcgaagaagccatcctgatatc 373
||||||| || ||||| || || |||||||||| |||||||||||||||||
Sbjct: 328 agaagttctccgctgcttactcgaactgcgcgaggaagccatcctgatatc 378
>dbj| AP008215.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 105 bits (53), Expect = 2e-19
Identities = 96/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Minus
Query: 212 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 268
||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 15332978 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 15332922
Query: 269 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 317
||||||||||||| ||||||| ||||| |||||||| ||||| |||||
Sbjct: 15332921 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 15332873
Score = 40.1 bits (20), Expect = 9.0
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 563 gggtttgagggctacgagaagcgcctcgagat 594
|||||||| ||||| ||||||||||| |||||
Sbjct: 15332497 gggtttgaaggctatgagaagcgccttgagat 15332466
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 8613491 cgcctcgccgccgccaccgc 8613472
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 2539236 cgcctcgccgccgccaccgc 2539255
>dbj| AP005420.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0418B08
Length = 165909
Score = 105 bits (53), Expect = 2e-19
Identities = 96/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Minus
Query: 212 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 268
||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 112167 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 112111
Query: 269 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 317
||||||||||||| ||||||| ||||| |||||||| ||||| |||||
Sbjct: 112110 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 112062
Score = 40.1 bits (20), Expect = 9.0
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 563 gggtttgagggctacgagaagcgcctcgagat 594
|||||||| ||||| ||||||||||| |||||
Sbjct: 111686 gggtttgaaggctatgagaagcgccttgagat 111655
>dbj| AB122089.1 | Oryza sativa (japonica cultivar-group) SAMDC1 gene for
S-adenosylmethionine decarboxylase, complete cds
Length = 2952
Score = 105 bits (53), Expect = 2e-19
Identities = 96/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 212 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 268
||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 1014 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 1070
Query: 269 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 317
||||||||||||| ||||||| ||||| |||||||| ||||| |||||
Sbjct: 1071 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 1119
Score = 40.1 bits (20), Expect = 9.0
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagat 594
|||||||| ||||| ||||||||||| |||||
Sbjct: 1495 gggtttgaaggctatgagaagcgccttgagat 1526
>dbj| AK102445.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033093N21, full
insert sequence
Length = 2047
Score = 105 bits (53), Expect = 2e-19
Identities = 96/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 212 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 268
||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 217 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 273
Query: 269 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 317
||||||||||||| ||||||| ||||| |||||||| ||||| |||||
Sbjct: 274 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 322
Score = 40.1 bits (20), Expect = 9.0
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagat 594
|||||||| ||||| ||||||||||| |||||
Sbjct: 595 gggtttgaaggctatgagaagcgccttgagat 626
>dbj| AK101535.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033048C18, full
insert sequence
Length = 2002
Score = 105 bits (53), Expect = 2e-19
Identities = 96/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 212 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 268
||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 218 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 274
Query: 269 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 317
||||||||||||| ||||||| ||||| |||||||| ||||| |||||
Sbjct: 275 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 323
Score = 40.1 bits (20), Expect = 9.0
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagat 594
|||||||| ||||| ||||||||||| |||||
Sbjct: 596 gggtttgaaggctatgagaagcgccttgagat 627
>dbj| AK100397.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023086M03, full
insert sequence
Length = 2546
Score = 105 bits (53), Expect = 2e-19
Identities = 96/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 212 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 268
||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 743 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 799
Query: 269 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 317
||||||||||||| ||||||| ||||| |||||||| ||||| |||||
Sbjct: 800 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 848
Score = 40.1 bits (20), Expect = 9.0
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagat 594
|||||||| ||||| ||||||||||| |||||
Sbjct: 1121 gggtttgaaggctatgagaagcgccttgagat 1152
>dbj| AK067682.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013116D10, full
insert sequence
Length = 2034
Score = 105 bits (53), Expect = 2e-19
Identities = 96/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 212 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 268
||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 217 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 273
Query: 269 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 317
||||||||||||| ||||||| ||||| |||||||| ||||| |||||
Sbjct: 274 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 322
Score = 40.1 bits (20), Expect = 9.0
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagat 594
|||||||| ||||| ||||||||||| |||||
Sbjct: 595 gggtttgaaggctatgagaagcgccttgagat 626
>ref| XM_506863.1 | PREDICTED Oryza sativa (japonica cultivar-group), OJ1476_F05.33
mRNA
Length = 1982
Score = 99.6 bits (50), Expect = 1e-17
Identities = 78/86 (90%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 270
||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 231 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 290
Query: 271 gaagctcccctcggctacagcattga 296
||||||||||||||||||||||||||
Sbjct: 291 gaagctcccctcggctacagcattga 316
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 590 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 649
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 650 tttgctgaccc 660
>emb| Y07768.1 |DSSADMEDC D.stramonium mRNA for S-adenosylmethionine decarboxylase
Length = 1839
Score = 99.6 bits (50), Expect = 1e-17
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 208 gtgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatg 267
||||||| ||||||||||||||| ||||| |||||| |||||||||||| | |
Sbjct: 133 gtgaatgatctaatggagtcaaaaggtgggaaaaagaagtctagtagtagttccttattt 192
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcgacca 309
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tacgaagctcccctcggctacagcattgaagacgttcgacca 234
>emb| AJ251899.1 |OSA251899 Oryza sativa mRNA for S-adenosylmethionine decarboxylase 2
(adometDC2 gene)
Length = 1971
Score = 99.6 bits (50), Expect = 1e-17
Identities = 78/86 (90%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 270
||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 217 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 276
Query: 271 gaagctcccctcggctacagcattga 296
||||||||||||||||||||||||||
Sbjct: 277 gaagctcccctcggctacagcattga 302
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 576 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 635
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 636 tttgctgaccc 646
>dbj| AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 99.6 bits (50), Expect = 1e-17
Identities = 78/86 (90%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 270
||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 24065827 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 24065886
Query: 271 gaagctcccctcggctacagcattga 296
||||||||||||||||||||||||||
Sbjct: 24065887 gaagctcccctcggctacagcattga 24065912
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 24066277 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 24066336
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 24066337 tttgctgaccc 24066347
>dbj| AP005286.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1004_A05
Length = 174290
Score = 99.6 bits (50), Expect = 1e-17
Identities = 78/86 (90%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 270
||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 24568 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 24627
Query: 271 gaagctcccctcggctacagcattga 296
||||||||||||||||||||||||||
Sbjct: 24628 gaagctcccctcggctacagcattga 24653
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 25018 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 25077
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 25078 tttgctgaccc 25088
>dbj| AP004063.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1476_F05
Length = 125426
Score = 99.6 bits (50), Expect = 1e-17
Identities = 78/86 (90%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 270
||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 100865 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 100924
Query: 271 gaagctcccctcggctacagcattga 296
||||||||||||||||||||||||||
Sbjct: 100925 gaagctcccctcggctacagcattga 100950
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 101315 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 101374
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 101375 tttgctgaccc 101385
>emb| AJ252214.1 |OSA252214 Oryza sativa partial adometDC2 gene for S-adenosylmethionine
decarboxylase 2, exons 1-3
Length = 1721
Score = 99.6 bits (50), Expect = 1e-17
Identities = 78/86 (90%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 270
||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 1129 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 1188
Query: 271 gaagctcccctcggctacagcattga 296
||||||||||||||||||||||||||
Sbjct: 1189 gaagctcccctcggctacagcattga 1214
Score = 46.1 bits (23), Expect = 0.15
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| ||||||||||||| ||| |||||| | ||
Sbjct: 1578 gcgatcgggtttgagggatatgagaa-agcctcgagatcactttctccgaggcgcctgtc 1636
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 1637 tttgctgaccc 1647
>dbj| AK070269.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023047N04, full
insert sequence
Length = 1182
Score = 99.6 bits (50), Expect = 1e-17
Identities = 78/86 (90%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 270
||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 228 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 287
Query: 271 gaagctcccctcggctacagcattga 296
||||||||||||||||||||||||||
Sbjct: 288 gaagctcccctcggctacagcattga 313
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 587 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 646
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 647 tttgctgaccc 657
>dbj| AK070259.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023041P13, full
insert sequence
Length = 1982
Score = 99.6 bits (50), Expect = 1e-17
Identities = 78/86 (90%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 270
||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 231 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 290
Query: 271 gaagctcccctcggctacagcattga 296
||||||||||||||||||||||||||
Sbjct: 291 gaagctcccctcggctacagcattga 316
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 590 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 649
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 650 tttgctgaccc 660
>ref| XM_466676.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 1750
Score = 95.6 bits (48), Expect = 2e-16
Identities = 76/84 (90%), Gaps = 6/84 (7%)
Strand = Plus / Plus
Query: 219 aatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtacga 272
||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||
Sbjct: 1 aatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtacga 60
Query: 273 agctcccctcggctacagcattga 296
||||||||||||||||||||||||
Sbjct: 61 agctcccctcggctacagcattga 84
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 358 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 417
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 418 tttgctgaccc 428
>dbj| AK062133.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E08, full
insert sequence
Length = 1750
Score = 95.6 bits (48), Expect = 2e-16
Identities = 76/84 (90%), Gaps = 6/84 (7%)
Strand = Plus / Plus
Query: 219 aatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtacga 272
||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||
Sbjct: 1 aatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtacga 60
Query: 273 agctcccctcggctacagcattga 296
||||||||||||||||||||||||
Sbjct: 61 agctcccctcggctacagcattga 84
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 557 gcgatcgggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatc 616
||||||||||||||||| || ||||| |||||||||||||| ||| |||||| | ||
Sbjct: 358 gcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtc 417
Query: 617 tttgctgaccc 627
|||||||||||
Sbjct: 418 tttgctgaccc 428
>gb| AY536644.1 | Brassica juncea S-adenosylmethionine decarboxylase (SAMDC4) mRNA,
complete cds
Length = 1705
Score = 93.7 bits (47), Expect = 7e-16
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 220 atggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgtacgaagct 276
||||||||||| ||||| |||||| |||||||||||||||||| | | |||||||||
Sbjct: 139 atggagtcaaaaggtggtaaaaagaagtctagcagtagtagttccttattttacgaagct 198
Query: 277 cccctcggctacagcattgaagacgttcg 305
|||||||| ||||||||||||||||||||
Sbjct: 199 cccctcggttacagcattgaagacgttcg 227
>gb| AF321141.1 |AF321141S1 Nicotiana tabacum S-adenosylmethionine decarboxylase mRNA, partial
cds
Length = 639
Score = 89.7 bits (45), Expect = 1e-14
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 249 cagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagacgttcgacc 308
||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 cagtagtagttccttattttacgaagctcccctcggctacagcattgaagacgttcgacc 81
Query: 309 a 309
|
Sbjct: 82 a 82
>gb| AY232672.1 | Narcissus pseudonarcissus S-adenosylmethionine decarboxylase
(SAMdc) mRNA, complete cds
Length = 1812
Score = 89.7 bits (45), Expect = 1e-14
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
|||||||||||||||| |||| || |||||||||||||||||||||||||||||||||
Sbjct: 182 aagtctagcagtagtaattccatgcaatacgaagctcccctcggctacagcattgaagac 241
Query: 301 gttcg 305
|||||
Sbjct: 242 gttcg 246
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 551 acctctgcgatcgggtttgagggctacgagaagcgcctcgagatcac 597
|||||| | |||||||| ||||||| |||||||||||||||||||||
Sbjct: 502 acctctccaatcgggttcgagggcttcgagaagcgcctcgagatcac 548
>ref| NM_001035545.1 | Arabidopsis thaliana SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE);
adenosylmethionine decarboxylase AT3G02470 (SAMDC)
transcript variant AT3G02470.2 mRNA, complete cds
Length = 2061
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
||||| ||||||||||||||| | | ||||||||||||||||| |||||||||||||||
Sbjct: 422 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 481
Query: 301 gttcg 305
|||||
Sbjct: 482 gttcg 486
>ref| NM_111114.2 | Arabidopsis thaliana SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE);
adenosylmethionine decarboxylase AT3G02470 (SAMDC)
transcript variant AT3G02470.1 mRNA, complete cds
Length = 1953
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
||||| ||||||||||||||| | | ||||||||||||||||| |||||||||||||||
Sbjct: 329 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 388
Query: 301 gttcg 305
|||||
Sbjct: 389 gttcg 393
>gb| DQ415920.1 | Cleome spinosa clone BAC Cs3, complete sequence
Length = 141360
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
|||||||||||||||| ||| | | |||||||||||||||||||||||||||||||||
Sbjct: 107086 aagtctagcagtagtaaatccttattctacgaagctcccctcggctacagcattgaagac 107145
Query: 301 gttcg 305
|||||
Sbjct: 107146 gttcg 107150
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 554 tctgcgatcgggtttgagggctacgagaagcgcctcgagat 594
||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct: 107475 tctgcaatcggatttgaaggctacgagaagcggctcgagat 107515
>gb| AC021640.7 |ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence,
complete sequence
Length = 103904
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
||||| ||||||||||||||| | | ||||||||||||||||| |||||||||||||||
Sbjct: 25483 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 25542
Query: 301 gttcg 305
|||||
Sbjct: 25543 gttcg 25547
>emb| Y07765.1 |ATSADMEDC A.thaliana gene encoding S-adenosylmethionine decarboxylase
Length = 2369
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
||||| ||||||||||||||| | | ||||||||||||||||| |||||||||||||||
Sbjct: 720 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 779
Query: 301 gttcg 305
|||||
Sbjct: 780 gttcg 784
>gb| AF428468.1 |AF428468 Arabidopsis thaliana AT3g02470/F16B3_10 mRNA, complete cds
Length = 1807
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
||||| ||||||||||||||| | | ||||||||||||||||| |||||||||||||||
Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315
Query: 301 gttcg 305
|||||
Sbjct: 316 gttcg 320
>gb| AY054185.1 | Arabidopsis thaliana AT3g02470/F16B3_10 mRNA, complete cds
Length = 1781
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
||||| ||||||||||||||| | | ||||||||||||||||| |||||||||||||||
Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315
Query: 301 gttcg 305
|||||
Sbjct: 316 gttcg 320
>gb| AY042824.1 | Arabidopsis thaliana S-adenosylmethionine decarboxylase (F16B3.10)
mRNA, complete cds
Length = 1876
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
||||| ||||||||||||||| | | ||||||||||||||||| |||||||||||||||
Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315
Query: 301 gttcg 305
|||||
Sbjct: 316 gttcg 320
>gb| U63633.1 |ATU63633 Arabidopsis thaliana S-adenosylmethionine decarboxylase (SAMdc)
mRNA, complete cds
Length = 1823
Score = 81.8 bits (41), Expect = 3e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 241 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 300
||||| ||||||||||||||| | | ||||||||||||||||| |||||||||||||||
Sbjct: 247 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 306
Query: 301 gttcg 305
|||||
Sbjct: 307 gttcg 311
>ref| XM_473046.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1197
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 46 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 105
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 106 gaccctgatggtcggggtttgcgcgccctctc 137
>gb| AY966487.1 | Oryza sativa (indica cultivar-group) S-adenosylmethionine
decarboxylase mRNA, complete cds
Length = 1197
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 46 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 105
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 106 gaccctgatggtcgggggttgcgcgccctctc 137
>gb| AF067194.1 |AF067194 Oryza sativa S-adenosylmethionine decarboxylase mRNA, complete cds
Length = 1560
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttcaacgaggcatcaatctttgct 622
|||||||||||||| ||||||||||| |||||||| ||| |||||| | ||||||||
Sbjct: 136 gggtttgagggctatgagaagcgccttgagatcactttctctgaggcacctgtctttgct 195
Query: 623 gaccctcatggtcgtggcctgcgcgccctctc 654
|||||| ||||||| || |||||||||||||
Sbjct: 196 gaccctgatggtcggggtttgcgcgccctctc 227
>gb| AY730047.1 | Phaseolus vulgaris putative SAMDC uORF mRNA, complete cds
Length = 162
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcgacca 309
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 58 tacgaagctcccctcggctacagcattgaagacattcgacca 99
>gb| S74514.1 | S-adenosylmethionine decarboxylase [Solanum tuberosum=potatoes, cv.
Desiree, Genomic, 2904 nt]
Length = 2904
Score = 71.9 bits (36), Expect = 3e-09
Identities = 90/106 (84%), Gaps = 4/106 (3%)
Strand = Plus / Plus
Query: 208 gtgaatgttctaatggagtcaaagggtggcaaa---aagtctagcagtagtagttccctg 264
||||||| ||||||||||||||| ||||| ||| |||||||| |||||||||||| |
Sbjct: 1101 gtgaatgatctaatggagtcaaaaggtggtaaaaagaagtctagtagtagtagttcctta 1160
Query: 265 atgtacg-aagctcccctcggctacagcattgaagacgttcgacca 309
| |||| |||||||||||||| ||||||| |||||||||||||
Sbjct: 1161 ttttacgtaagctcccctcggcatcagcattagagacgttcgacca 1206
>dbj| AB077442.2 | Malus x domestica SAMDC mRNA for S-adenosylmethionine
decarboxylase, complete cds, clone:MdSAMDC2
Length = 1938
Score = 69.9 bits (35), Expect = 1e-08
Identities = 76/89 (85%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 217 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgtacgaa 273
||||||||||| || |||||||||||| ||||| ||||||| || || | ||||||
Sbjct: 251 ctaatggagtccaaaggtggcaaaaaggattctagtagtagtaaatcattgttctacgaa 310
Query: 274 gctcccctcggctacagcattgaagacgt 302
||||||||||| |||||||||||||||||
Sbjct: 311 gctcccctcggttacagcattgaagacgt 339
>gb| AY491510.2 | Daucus carota S-adenosylmethionine decarboxylase (samdc1) gene,
complete cds
Length = 2849
Score = 67.9 bits (34), Expect = 4e-08
Identities = 86/103 (83%), Gaps = 9/103 (8%)
Strand = Plus / Plus
Query: 209 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagt------agtagt---t 259
||||||||||||||||| |||| ||||| ||||||||||| ||| |||||| |
Sbjct: 1126 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagtagtagtaaat 1185
Query: 260 ccctgatgtacgaagctcccctcggctacagcattgaagacgt 302
|| || | ||||||||||||||||| |||||||||||||||||
Sbjct: 1186 ccttgttctacgaagctcccctcggatacagcattgaagacgt 1228
>gb| DQ415922.1 | Cleome spinosa clone BAC Cs1, complete sequence
Length = 146078
Score = 67.9 bits (34), Expect = 4e-08
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
||||||||||||||||| ||||||||||||||||||||
Sbjct: 111914 tacgaagctcccctcggttacagcattgaagacgttcg 111951
Score = 58.0 bits (29), Expect = 4e-05
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 554 tctgcgatcgggtttgagggctacgagaagcgcctcgagat 594
||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 112272 tctgcgatcggatttgaaggctacgagaagcggctcgagat 112312
>gb| AY491511.1 | Daucus carota S-adenosylmethionine decarboxylase (samdc2) gene,
complete cds
Length = 2843
Score = 67.9 bits (34), Expect = 4e-08
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 209 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagt 258
||||||||||||||||| |||| ||||| ||||||||||| |||||||||
Sbjct: 1124 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagt 1173
Score = 61.9 bits (31), Expect = 2e-06
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgt 302
||||||||||||||||| |||||||||||||||||
Sbjct: 1192 tacgaagctcccctcggatacagcattgaagacgt 1226
>emb| X95729.1 |BJSAMDC1G B.juncea mRNA for S-adenosylmethionine decarboxylase
Length = 1653
Score = 67.9 bits (34), Expect = 4e-08
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tacgaagctcccctcggttacagcattgaagacgttcg 238
>gb| AF488307.1 | Glycine max S-adenosylmethionine decarboxylase (SAMDC) mRNA,
complete cds
Length = 1824
Score = 67.9 bits (34), Expect = 4e-08
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcgacca 309
||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 278 tacgaagctcccctcggatacagcattgaagacgttagacca 319
>gb| AF420239.1 |AF420239 Dendrobium crumenatum S-adenosyl-L-methionine decarboxylase (Samdc)
mRNA, complete cds
Length = 1894
Score = 67.9 bits (34), Expect = 4e-08
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
||||||| ||||||||||||||||||||||||||||||
Sbjct: 272 tacgaagttcccctcggctacagcattgaagacgttcg 309
Score = 46.1 bits (23), Expect = 0.15
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 563 gggtttgagggctacgagaagcgcctcgagatcaccttc 601
||||| |||||||| || |||||||| ||||||||||||
Sbjct: 557 gggttcgagggctatgaaaagcgccttgagatcaccttc 595
>gb| AY444341.1 | Brassica juncea S-adenosyl-L-methionine decarboxylase (SAMDC2) gene,
complete cds
Length = 4456
Score = 67.9 bits (34), Expect = 4e-08
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
||||||||||||||||| ||||||||||||||||||||
Sbjct: 2891 tacgaagctcccctcggttacagcattgaagacgttcg 2928
Score = 54.0 bits (27), Expect = 6e-04
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 553 ctctgcgatcgggtttgagggctacgagaagcgcctcga 591
|||||| |||||||| || ||||||||||||||||||||
Sbjct: 3205 ctctgcaatcgggttcgaaggctacgagaagcgcctcga 3243
>gb| AF334029.1 |AF334029 Daucus carota S-adenosyl-methionine decarboxylase (SAMDC) mRNA,
complete cds
Length = 1761
Score = 67.9 bits (34), Expect = 4e-08
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 209 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagt 258
||||||||||||||||| |||| ||||| ||||||||||| |||||||||
Sbjct: 139 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagt 188
Score = 61.9 bits (31), Expect = 2e-06
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgt 302
||||||||||||||||| |||||||||||||||||
Sbjct: 207 tacgaagctcccctcggatacagcattgaagacgt 241
>gb| AF215665.1 |AF215665 Brassica juncea S-adenosyl-L-methionine decarboxylase (SAMDC3)
mRNA, complete cds
Length = 1743
Score = 67.9 bits (34), Expect = 4e-08
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
||||||||||||||||| ||||||||||||||||||||
Sbjct: 233 tacgaagctcccctcggttacagcattgaagacgttcg 270
Score = 54.0 bits (27), Expect = 6e-04
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 554 tctgcgatcgggtttgagggctacgagaagcgcctcgag 592
||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 480 tctgcaatcggctttgaaggctacgagaagcgcctcgag 518
>gb| U80916.1 |BJU80916 Brassica juncea S-adenosyl-L-methionine decarboxylase mRNA,
complete cds
Length = 1676
Score = 67.9 bits (34), Expect = 4e-08
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
||||||||||||||||| ||||||||||||||||||||
Sbjct: 194 tacgaagctcccctcggttacagcattgaagacgttcg 231
Score = 54.0 bits (27), Expect = 6e-04
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 553 ctctgcgatcgggtttgagggctacgagaagcgcctcga 591
|||||| |||||||| || ||||||||||||||||||||
Sbjct: 420 ctctgcaatcgggttcgaaggctacgagaagcgcctcga 458
>dbj| AB062360.1 | Phaseolus lunatus SAMDC mRNA for S-adenosylmethionine
decarboxylase, complete cds
Length = 1518
Score = 67.9 bits (34), Expect = 4e-08
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcgacca 309
|||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 2 tacgaagctcccctcggctatagcattgaagacattcgacca 43
>gb| U12573.1 |CRU12573 Catharanthus roseus S-adenosyl-L-methionine decarboxylase proenzyme
mRNA, complete cds
Length = 1864
Score = 65.9 bits (33), Expect = 2e-07
Identities = 83/99 (83%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 207 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 263
|||||||| |||||||||||| || ||||| || ||| ||||| ||||||| ||| |
Sbjct: 147 agtgaatgatctaatggagtctaaaggtgggaagaagaagtctagtagtagtaaatcctt 206
Query: 264 gatgtacgaagctcccctcggctacagcattgaagacgt 302
| ||||||||||||||||| |||||||||||||||||
Sbjct: 207 attctacgaagctcccctcggatacagcattgaagacgt 245
>emb| AJ704800.1 | Prunus persica partial samdc gene for S-adenosylmethionine
decarboxylase, exons 1-3
Length = 1189
Score = 61.9 bits (31), Expect = 2e-06
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgt 302
||||||||||||||||| |||||||||||||||||
Sbjct: 52 tacgaagctcccctcggttacagcattgaagacgt 86
>gb| AF033100.1 |AF033100 Nicotiana tabacum S-adenosylmethionine decarboxylase gene, complete
cds
Length = 2325
Score = 60.0 bits (30), Expect = 1e-05
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
|||||||| |||||||||||||| ||||||||||||||
Sbjct: 337 tacgaagcacccctcggctacagtattgaagacgttcg 374
>gb| AY104070.1 | Zea mays PCO115703 mRNA sequence
Length = 2000
Score = 56.0 bits (28), Expect = 2e-04
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 566 tttgagggctacgagaagcgcctcgagatcac 597
||||||||||| ||||||||||||||||||||
Sbjct: 563 tttgagggctatgagaagcgcctcgagatcac 594
Score = 54.0 bits (27), Expect = 6e-04
Identities = 86/105 (81%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 216 tctaatggagtcaaagggtggcaaaaagtctagcagtagta---gttccctgatgtacga 272
|||||||||||| || |||||||| |||||||| ||||||| || | ||||||||
Sbjct: 178 tctaatggagtcgaaaggtggcaagaagtctagtagtagtaatagtaatttcatgtacga 237
Query: 273 agctcccctcggctacagcattgaagacgttcgaccagctggagg 317
||||||||| ||||||| || || |||||||| ||||| |||||
Sbjct: 238 agctccccttggctacaagatcgaggacgttcgcccagccggagg 282
>ref| NM_001036811.1 | Arabidopsis thaliana adenosylmethionine decarboxylase AT5G15950
transcript variant AT5G15950.2 mRNA, complete cds
Length = 1881
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
|||||||| ||||| || ||||||||||||||||||||
Sbjct: 328 tacgaagcaccccttggttacagcattgaagacgttcg 365
>ref| NM_121600.2 | Arabidopsis thaliana adenosylmethionine decarboxylase AT5G15950
transcript variant AT5G15950.1 mRNA, complete cds
Length = 1748
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
|||||||| ||||| || ||||||||||||||||||||
Sbjct: 244 tacgaagcaccccttggttacagcattgaagacgttcg 281
>gb| BT013281.1 | Lycopersicon esculentum clone 134862F, mRNA sequence
Length = 1812
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcgacca 309
|||||||||||||| || |||| ||||||||||||||||||
Sbjct: 258 tacgaagctcccctaggttacactattgaagacgttcgacca 299
>emb| AL391145.1 |ATF1N13 Arabidopsis thaliana DNA chromosome 5, BAC clone F1N13 (ESSA project)
Length = 74687
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
|||||||| ||||| || ||||||||||||||||||||
Sbjct: 25193 tacgaagcaccccttggttacagcattgaagacgttcg 25230
>emb| AJ252212.1 |ATH252212 Arabidopsis thaliana adometDC2 gene for S-adenosylmethionine
decarboxylase, exons 1-3
Length = 2072
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
|||||||| ||||| || ||||||||||||||||||||
Sbjct: 651 tacgaagcaccccttggttacagcattgaagacgttcg 688
>emb| AJ251915.1 |ATH251915 Arabidopsis thaliana mRNA for S-adenosylmethionine decarboxylase
(adoMetDC2 gene)and ORF
Length = 1723
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
|||||||| ||||| || ||||||||||||||||||||
Sbjct: 234 tacgaagcaccccttggttacagcattgaagacgttcg 271
>gb| U60592.1 |PSU60592 Pisum sativum putative ORF; conserved in 5' leaders of plant SAMdC
and S-adenosylmethionine decarboxylase mRNAs, complete
cds
Length = 1829
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
|||||||| |||||||| ||||||||||||||| ||||
Sbjct: 262 tacgaagcccccctcggatacagcattgaagacattcg 299
>gb| AF436825.1 |AF436825 Arabidopsis thaliana AT5g15950/F1N13_90 mRNA, complete cds
Length = 1728
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 268 tacgaagctcccctcggctacagcattgaagacgttcg 305
|||||||| ||||| || ||||||||||||||||||||
Sbjct: 245 tacgaagcaccccttggttacagcattgaagacgttcg 282
>gb| U38527.1 |DCU38527 Dianthus caryophyllus S-adenosylmethionine 2 decarboxylase mRNA,
complete cds
Length = 1829
Score = 52.0 bits (26), Expect = 0.002
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 280 ctcggctacagcattgaagacgttcgacca 309
||||||||||||||||||||| ||||||||
Sbjct: 222 ctcggctacagcattgaagaccttcgacca 251
>emb| AJ567368.2 |VVI567368 Vitis vinifera samdc gene for S-adenosylmethionine decarboxylase
proenzyme, mRNA
Length = 1709
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 271 gaagctcccctcggctacagcattgaagacgttcgacc 308
|||||||| || |||||||||||||||||| |||||||
Sbjct: 144 gaagctcctcttggctacagcattgaagacattcgacc 181
>gb| BT013882.1 | Lycopersicon esculentum clone 132862F, mRNA sequence
Length = 1849
Score = 46.1 bits (23), Expect = 0.15
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 271 gaagctcccctcggctacagcattgaagacgttcgacca 309
||||| ||||| |||||||| |||||||||||| |||||
Sbjct: 213 gaagcaccccttggctacagtattgaagacgttagacca 251
Score = 44.1 bits (22), Expect = 0.57
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 208 gtgaatgttctaatggagtcaaagggtggcaaaaagtctagcagta 253
||||||| |||||||||||| || ||||| || |||||||| ||||
Sbjct: 153 gtgaatgatctaatggagtctaaaggtgggaagaagtctagtagta 198
>dbj| AB077441.2 | Malus x domestica SAMDC mRNA for S-adenosylmethionine
decarboxylase, complete cds, clone:MdSAMDC1
Length = 1875
Score = 46.1 bits (23), Expect = 0.15
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 220 atggagtcaaagggtggcaaaaagtctagcagtagtagt 258
|||||||| || ||||| ||||||||||| |||||||||
Sbjct: 159 atggagtccaaaggtggtaaaaagtctagtagtagtagt 197
>gb| CP000251.1 | Anaeromyxobacter dehalogenans 2CP-C, complete genome
Length = 5013479
Score = 46.1 bits (23), Expect = 0.15
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 570 agggctacgagaagcgcctcgagatca 596
|||||||||||||| ||||||||||||
Sbjct: 2179454 agggctacgagaagggcctcgagatca 2179428
>gb| U94786.1 |DCU94786 Dianthus caryophyllus S-adenosylmethionine decarboxylase (gcsdc9)
gene, complete cds
Length = 4311
Score = 46.1 bits (23), Expect = 0.15
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 274 gctcccctcggctacagcattgaagacgttcgacc 308
||||| ||||| ||||||||||| |||||||||||
Sbjct: 2692 gctccactcggttacagcattgaggacgttcgacc 2726
>gb| AY663392.1 | Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
Length = 153766
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 accgcctcgccgccgccaccgc 51
||||||||||||||||||||||
Sbjct: 67986 accgcctcgccgccgccaccgc 68007
>gb| AF326781.1 | Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
condensation factor (CCF), putative resistance protein
(RGA-2), putative resistance protein (RGA2) and putative
nodulin-like-like protein (NLL) gene, complete cds; and
retrotransposons Josephine, Angela-2, Angela-4, Heidi,
Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
Barbara, Isabelle, Erika-2, and Claudia
Length = 211009
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 30 accgcctcgccgccgccaccgc 51
||||||||||||||||||||||
Sbjct: 201743 accgcctcgccgccgccaccgc 201722
>gb| AC087552.3 | Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
complete sequence
Length = 151399
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 accgcctcgccgccgccaccgc 51
||||||||||||||||||||||
Sbjct: 61842 accgcctcgccgccgccaccgc 61863
>dbj| AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 accgcctcgccgccgccaccgc 51
||||||||||||||||||||||
Sbjct: 1968965 accgcctcgccgccgccaccgc 1968986
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 36 tcgccgccgccaccgcagcc 55
||||||||||||||||||||
Sbjct: 5915506 tcgccgccgccaccgcagcc 5915487
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 4756299 cgcctcgccgccgccaccgc 4756280
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 4645666 cgcctcgccgccgccaccgc 4645685
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 562 cgggtttgagggctacgagaagcg 585
|||||||||||||| |||||||||
Sbjct: 2357948 cgggtttgagggcttcgagaagcg 2357925
>dbj| AK102034.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033081B21, full
insert sequence
Length = 1312
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 accgcctcgccgccgccaccgc 51
||||||||||||||||||||||
Sbjct: 678 accgcctcgccgccgccaccgc 699
>dbj| AK099362.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033048I06, full
insert sequence
Length = 1345
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 accgcctcgccgccgccaccgc 51
||||||||||||||||||||||
Sbjct: 709 accgcctcgccgccgccaccgc 730
>emb| CT573229.8 | Zebrafish DNA sequence from clone DKEY-11D7 in linkage group 1,
complete sequence
Length = 146843
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 328 ttttctgctgcatattcaaact 349
||||||||||||||||||||||
Sbjct: 46886 ttttctgctgcatattcaaact 46907
>dbj| AK064360.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B09, full
insert sequence
Length = 1365
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 accgcctcgccgccgccaccgc 51
||||||||||||||||||||||
Sbjct: 708 accgcctcgccgccgccaccgc 729
>tpe| BN000595.1 | TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx66 gene for
class III peroxidase 66, exons 1-2
Length = 1925
Score = 44.1 bits (22), Expect = 0.57
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 accgcctcgccgccgccaccgc 51
||||||||||||||||||||||
Sbjct: 1495 accgcctcgccgccgccaccgc 1516
>emb| AL137800.12 | Human DNA sequence from clone RP1-127C7 on chromosome 1q25.1-31.1
Contains the 3' end of the C1orf16 gene for chromosome 1
open reading frame 16, the NCF2 gene for neutrophil
cytosolic factor 2 (65kDa, chronic granulomatous disease,
autosomal 2), a novel gene, the ARPC5 gene for actin
related protein 2/3 complex subunit 5 (16kDa), the 5' end
of the RGL1 gene for ral guanine nucleotide dissociation
stimulator-like 1, a novel gene (MGC26594) and a CpG
island, complete sequence
Length = 185832
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 414 caattttattctgactctttt 434
|||||||||||||||||||||
Sbjct: 5443 caattttattctgactctttt 5463
>gb| AY741575.1 | Uncultured sulfate-reducing bacterium clone PIMO3E11 dissimilatory
sulfite reductase alpha subunit (dsrA) and dissimilatory
sulfite reductase beta subunit (dsrB) genes, partial cds
Length = 1848
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 443 aatctctctggcttgctgctt 463
|||||||||||||||||||||
Sbjct: 1629 aatctctctggcttgctgctt 1649
>dbj| AK016582.1 | Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:4932703K07 product:unclassifiable, full
insert sequence
Length = 1166
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ccgcctcgccgccgccaccgc 51
|||||||||||||||||||||
Sbjct: 84 ccgcctcgccgccgccaccgc 104
>dbj| AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 42.1 bits (21), Expect = 2.3
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 31 ccgcctcgccgccgccaccgcagcc 55
|||||||||||||||| ||||||||
Sbjct: 17555795 ccgcctcgccgccgccgccgcagcc 17555819
>dbj| BA000030.2 | Streptomyces avermitilis MA-4680 genomic DNA, complete genome
Length = 9025608
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 629 catggtcgtggcctgcgcgcc 649
|||||||||||||||||||||
Sbjct: 4305564 catggtcgtggcctgcgcgcc 4305544
>emb| AL596265.12 | Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete
sequence
Length = 205332
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 31 ccgcctcgccgccgccaccgc 51
|||||||||||||||||||||
Sbjct: 108600 ccgcctcgccgccgccaccgc 108580
>gb| DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 42.1 bits (21), Expect = 2.3
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 31 ccgcctcgccgccgccaccgcagcc 55
|||||||||||||||| ||||||||
Sbjct: 17510166 ccgcctcgccgccgccgccgcagcc 17510190
>emb| AL935066.2 |CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 162200
Score = 42.1 bits (21), Expect = 2.3
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 31 ccgcctcgccgccgccaccgcagcc 55
|||||||||||||||| ||||||||
Sbjct: 48131 ccgcctcgccgccgccgccgcagcc 48155
>ref| XM_476068.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1245
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 1212 cgcctcgccgccgccaccgc 1231
>ref| NM_113454.2 | Arabidopsis thaliana adenosylmethionine decarboxylase AT3G25570
mRNA, complete cds
Length = 1527
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 286 tacagcattgaagacgttcgacca 309
|||||||||||||||||| |||||
Sbjct: 79 tacagcattgaagacgttagacca 102
>gb| AY421966.1 | Cryptococcus gattii strain ATCC 32609 MAT-alpha mating locus, fragment
III
Length = 17317
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 406 tttttatgcaattttattct 425
||||||||||||||||||||
Sbjct: 16882 tttttatgcaattttattct 16863
>ref| XM_475588.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1080
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 562 cgggtttgagggctacgagaagcg 585
|||||||||||||| |||||||||
Sbjct: 12 cgggtttgagggcttcgagaagcg 35
>gb| AY360393.2 | Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
complete sequence
Length = 164501
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 ctcgtcgggagggctcgaga 109
||||||||||||||||||||
Sbjct: 42838 ctcgtcgggagggctcgaga 42857
>gb| AC102756.8 | Mus musculus chromosome 3, clone RP24-167K1, complete sequence
Length = 175712
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 445 tctctctggcttgctgcttc 464
||||||||||||||||||||
Sbjct: 59726 tctctctggcttgctgcttc 59707
>gb| AY360394.1 | Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
complete sequence
Length = 158749
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ctcgtcgggagggctcgaga 109
||||||||||||||||||||
Sbjct: 20409 ctcgtcgggagggctcgaga 20390
>gb| AY022835.1 | Oryza sativa microsatellite MRG5160 containing (CGC)X10, genomic
sequence
Length = 230
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 34 cctcgccgccgccaccgcag 53
||||||||||||||||||||
Sbjct: 148 cctcgccgccgccaccgcag 167
>gb| AC132493.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04,
complete sequence
Length = 141171
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 36 tcgccgccgccaccgcagcc 55
||||||||||||||||||||
Sbjct: 53080 tcgccgccgccaccgcagcc 53061
>gb| AC151480.1 | Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15,
complete sequence
Length = 130161
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgcagcc 55
||||||||||||||| ||||||||
Sbjct: 117156 cgcctcgccgccgccgccgcagcc 117133
>gb| AC144738.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02,
complete sequence
Length = 156649
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 156133 cgcctcgccgccgccaccgc 156152
>gb| AC133003.3 | Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
sequence
Length = 190055
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 22669 cgcctcgccgccgccaccgc 22650
>gb| AC104277.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04,
complete sequence
Length = 133271
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 562 cgggtttgagggctacgagaagcg 585
|||||||||||||| |||||||||
Sbjct: 33548 cgggtttgagggcttcgagaagcg 33525
>gb| AC123526.2 | Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
complete sequence
Length = 185449
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgcagcc 55
||||||||||||||| ||||||||
Sbjct: 50137 cgcctcgccgccgccgccgcagcc 50114
>gb| DP000009.1 | Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 21329758 cgcctcgccgccgccaccgc 21329739
>gb| AY339884.1 | Zea mays WD40 repeat protein (mp1) gene, complete cds
Length = 2965
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 1537 cgcctcgccgccgccaccgc 1518
>emb| CT025565.5 | Mouse DNA sequence from clone RP24-126K5 on chromosome 17, complete
sequence
Length = 175523
Score = 40.1 bits (20), Expect = 9.0
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 396 tagtttaggatttttatgcaattttatt 423
|||||||||||||||||| |||| ||||
Sbjct: 77096 tagtttaggatttttatgaaattctatt 77069
>gb| AC146108.3 | Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence
Length = 230349
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 416 attttattctgactcttttc 435
||||||||||||||||||||
Sbjct: 43595 attttattctgactcttttc 43614
>gb| AC146056.2 | Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence
Length = 154447
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 416 attttattctgactcttttc 435
||||||||||||||||||||
Sbjct: 86873 attttattctgactcttttc 86892
>ref| NM_031220.1 | Homo sapiens PITPNM family member 3 (PITPNM3), mRNA
Length = 3109
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgcagcc 55
|||||||| |||||||||||||||
Sbjct: 32 cgcctcgctgccgccaccgcagcc 9
>emb| Z82204.1 |HS362G17 Human DNA sequence from clone RP3-362G17 on chromosome X Contains part
of the FGF13 gene for fibroblast growth factor 13,
complete sequence
Length = 75145
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 320 caaagaagttttctgctgca 339
||||||||||||||||||||
Sbjct: 32059 caaagaagttttctgctgca 32078
>gb| AC157815.9 | Mus musculus chromosome 3, clone RP24-175G5, complete sequence
Length = 170361
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 445 tctctctggcttgctgcttc 464
||||||||||||||||||||
Sbjct: 10144 tctctctggcttgctgcttc 10163
>gb| AC130610.3 | Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
complete sequence
Length = 145070
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 124304 cgcctcgccgccgccaccgc 124285
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 15009 cgcctcgccgccgccaccgc 15028
>gb| AC149634.8 | Medicago truncatula clone mth2-5i17, complete sequence
Length = 116601
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 238 aaaaagtctagcagtagtag 257
||||||||||||||||||||
Sbjct: 22368 aaaaagtctagcagtagtag 22349
>gb| AC004673.1 | Homo sapiens X BAC GSHB-590J15 (Genome Systems Human BAC library)
complete sequence
Length = 236281
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 405 atttttatgcaattttattc 424
||||||||||||||||||||
Sbjct: 200817 atttttatgcaattttattc 200798
>gb| AC077693.19 | Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
sequence
Length = 187707
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 34 cctcgccgccgccaccgcag 53
||||||||||||||||||||
Sbjct: 52613 cctcgccgccgccaccgcag 52594
>dbj| AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgcagcc 55
||||||||||||||| ||||||||
Sbjct: 1978582 cgcctcgccgccgccgccgcagcc 1978559
>dbj| AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 34 cctcgccgccgccaccgcag 53
||||||||||||||||||||
Sbjct: 22048069 cctcgccgccgccaccgcag 22048050
>dbj| AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 ctcgtcgggagggctcgaga 109
||||||||||||||||||||
Sbjct: 12373426 ctcgtcgggagggctcgaga 12373445
>dbj| AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 21322787 cgcctcgccgccgccaccgc 21322768
>emb| BX823121.1 |CNS0A7A6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB91ZD09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1700
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 286 tacagcattgaagacgttcgacca 309
|||||||||||||||||| |||||
Sbjct: 282 tacagcattgaagacgttagacca 305
>gb| AF334586.1 |AF334586 Homo sapiens NIR1 mRNA, complete cds
Length = 3109
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgcagcc 55
|||||||| |||||||||||||||
Sbjct: 32 cgcctcgctgccgccaccgcagcc 9
>gb| AC154337.2 | Mus musculus BAC clone RP23-254P20 from chromosome 17, complete sequence
Length = 182101
Score = 40.1 bits (20), Expect = 9.0
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 396 tagtttaggatttttatgcaattttatt 423
|||||||||||||||||| |||| ||||
Sbjct: 133556 tagtttaggatttttatgaaattctatt 133583
>gb| AC011238.8 | Homo sapiens BAC clone RP11-374C5 from 2, complete sequence
Length = 155764
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 405 atttttatgcaattttattc 424
||||||||||||||||||||
Sbjct: 151840 atttttatgcaattttattc 151859
>dbj| AP005782.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OSJNBb0079G12
Length = 139796
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 134701 cgcctcgccgccgccaccgc 134682
>dbj| AP005583.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0406E03
Length = 201069
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 125826 cgcctcgccgccgccaccgc 125845
>dbj| AP005802.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OSJNBa0057D11
Length = 190790
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 43287 cgcctcgccgccgccaccgc 43268
>dbj| AP004458.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0045D08
Length = 160541
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 ctcgtcgggagggctcgaga 109
||||||||||||||||||||
Sbjct: 132075 ctcgtcgggagggctcgaga 132094
>dbj| AB025639.1 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2
Length = 84896
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 286 tacagcattgaagacgttcgacca 309
|||||||||||||||||| |||||
Sbjct: 75562 tacagcattgaagacgttagacca 75539
>dbj| AK121556.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033033I04,
full insert sequence
Length = 1815
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 28 cgcctcgccgccgccaccgc 47
>gb| AC009542.2 |AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence
Length = 160367
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 416 attttattctgactcttttc 435
||||||||||||||||||||
Sbjct: 118579 attttattctgactcttttc 118560
>gb| AC009330.5 |AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence
Length = 174768
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 416 attttattctgactcttttc 435
||||||||||||||||||||
Sbjct: 115766 attttattctgactcttttc 115747
>dbj| AK106389.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E10, full
insert sequence
Length = 2058
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 36 tcgccgccgccaccgcagcc 55
||||||||||||||||||||
Sbjct: 1369 tcgccgccgccaccgcagcc 1388
>dbj| AK105900.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F08, full
insert sequence
Length = 1399
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 194 cgcctcgccgccgccaccgc 213
>dbj| AK067998.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013127N17, full
insert sequence
Length = 2575
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 34 cctcgccgccgccaccgcag 53
||||||||||||||||||||
Sbjct: 105 cctcgccgccgccaccgcag 124
>dbj| AK065299.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013002N17, full
insert sequence
Length = 2760
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 82 cgcctcgccgccgccaccgc 101
>gb| AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 34 cctcgccgccgccaccgcag 53
||||||||||||||||||||
Sbjct: 22059732 cctcgccgccgccaccgcag 22059713
>gb| DP000010.1 | Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgcagcc 55
||||||||||||||| ||||||||
Sbjct: 1986363 cgcctcgccgccgccgccgcagcc 1986340
>dbj| AP006372.1 | Lotus japonicus genomic DNA, chromosome 1, clone:LjT36C05, TM0215b,
complete sequence
Length = 84914
Score = 40.1 bits (20), Expect = 9.0
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 266 tgtacgaagctcccctcggctacagcattgaagacgttcgacca 309
|||| |||||||| |||| |||| ||||||||||||||||||
Sbjct: 49422 tgtatgaagctcctctcgattacataattgaagacgttcgacca 49379
>gb| AC135425.3 | Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
complete sequence
Length = 187956
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 cgcctcgccgccgccaccgc 51
||||||||||||||||||||
Sbjct: 28707 cgcctcgccgccgccaccgc 28688
>emb| AL669981.11 | Mouse DNA sequence from clone RP23-335B9 on chromosome 4, complete
sequence
Length = 222981
Score = 40.1 bits (20), Expect = 9.0
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 609 catcaatctttgctgaccct 628
||||||||||||||||||||
Sbjct: 216177 catcaatctttgctgaccct 216158
>gb| AC105262.3 | Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03,
complete sequence
Length = 107870
Score = 40.1 bits (20), Expect = 9.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 562 cgggtttgagggctacgagaagcg 585
|||||||||||||| |||||||||
Sbjct: 85863 cgggtttgagggcttcgagaagcg 85840
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,368,495
Number of Sequences: 3902068
Number of extensions: 4368495
Number of successful extensions: 101875
Number of sequences better than 10.0: 152
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99726
Number of HSP's gapped (non-prelim): 2084
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)