Clone Name | basd2e16 |
---|---|
Clone Library Name | barley_pub |
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 77.0 bits (188), Expect = 4e-14 Identities = 37/39 (94%), Positives = 38/39 (97%) Frame = +2 Query: 524 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 MAAP SAIGFEGYEKRLEITF+EASIFADPHGRGLRALS Sbjct: 1 MAAPVSAIGFEGYEKRLEITFSEASIFADPHGRGLRALS 39
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 70.9 bits (172), Expect = 3e-12 Identities = 33/42 (78%), Positives = 37/42 (88%) Frame = +2 Query: 515 TATMAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 +A A+P SAIGFEGYEKRLEITF+EA +F DPHGRGLRALS Sbjct: 5 SAADASPVSAIGFEGYEKRLEITFSEAPVFVDPHGRGLRALS 46
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 66.2 bits (160), Expect = 8e-11 Identities = 31/36 (86%), Positives = 33/36 (91%) Frame = +2 Query: 533 PTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 P SAIGFEGYEKRLEITF+EA +FADP GRGLRALS Sbjct: 11 PVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALS 46
>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 65.1 bits (157), Expect = 2e-10 Identities = 32/39 (82%), Positives = 34/39 (87%) Frame = +2 Query: 524 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 MA TSAIGFEGYEKRLEI+F EA IF+DP GRGLRALS Sbjct: 1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALS 39
>DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 357 Score = 63.5 bits (153), Expect = 5e-10 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = +2 Query: 524 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 MA P SAIGFEGYEKRLEI+F E+S FADP G+GLRAL+ Sbjct: 1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALN 39
>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 63.2 bits (152), Expect = 6e-10 Identities = 31/39 (79%), Positives = 33/39 (84%) Frame = +2 Query: 524 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 MA TSAIGFEGYE RLEI+F EA IF+DP GRGLRALS Sbjct: 1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALS 39
>DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 61.2 bits (147), Expect = 2e-09 Identities = 28/39 (71%), Positives = 34/39 (87%) Frame = +2 Query: 524 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 MA P SAIGFEG+EKRLEI+F E +FADP+G+GLR+LS Sbjct: 3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLS 41
>DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 59.3 bits (142), Expect = 9e-09 Identities = 27/38 (71%), Positives = 33/38 (86%) Frame = +2 Query: 527 AAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 A P SAIGFEG+EKRLEI+F E +FADP+G+GLR+LS Sbjct: 4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLS 41
>DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 360 Score = 58.9 bits (141), Expect = 1e-08 Identities = 27/39 (69%), Positives = 33/39 (84%) Frame = +2 Query: 524 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 M P SAIGFEG+EKRLEI+F E +FADP+G+GLR+LS Sbjct: 3 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLS 41
>DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 57.8 bits (138), Expect = 3e-08 Identities = 27/39 (69%), Positives = 32/39 (82%) Frame = +2 Query: 524 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 M++ SAIGFEG+EKRLEI+F E S FADP G+GLR LS Sbjct: 1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLS 39
>DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 57.8 bits (138), Expect = 3e-08 Identities = 26/39 (66%), Positives = 33/39 (84%) Frame = +2 Query: 524 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 M P SAIGFEG+EKRLEI+F E +F+DP+G+GLR+LS Sbjct: 3 MDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLS 41
>DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 363 Score = 57.0 bits (136), Expect = 5e-08 Identities = 27/33 (81%), Positives = 29/33 (87%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRAL 637 SAIGFEG+EKRLEITF E SIF DP G+GLRAL Sbjct: 4 SAIGFEGFEKRLEITFFEPSIFVDPEGKGLRAL 36
>DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 369 Score = 55.8 bits (133), Expect = 1e-07 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRAL 637 SAIGFEGYEKRLE++F E S+F D HG+GLRAL Sbjct: 4 SAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRAL 36
>DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 377 Score = 55.5 bits (132), Expect = 1e-07 Identities = 26/34 (76%), Positives = 29/34 (85%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 SAIGFEG+EKRLEI+F E IF DP G+GLRALS Sbjct: 19 SAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALS 52
>DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 381 Score = 55.5 bits (132), Expect = 1e-07 Identities = 26/34 (76%), Positives = 29/34 (85%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 SAIGFEG+EKRLEI+F E IF DP G+GLRALS Sbjct: 28 SAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALS 61
>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 54.3 bits (129), Expect = 3e-07 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 SAIGFEG+EKRLEI+F++ +F+DP GRGLR+L+ Sbjct: 4 SAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLT 37
>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 54.3 bits (129), Expect = 3e-07 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 SAIGFEG+EKRLEI+F++ +F+DP GRGLR+L+ Sbjct: 4 SAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLT 37
>DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 366 Score = 53.1 bits (126), Expect = 7e-07 Identities = 26/34 (76%), Positives = 28/34 (82%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 SAIGFEGYEKRLE+TF E SIF D G GLRAL+ Sbjct: 4 SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALT 37
>DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 362 Score = 52.8 bits (125), Expect = 9e-07 Identities = 24/34 (70%), Positives = 28/34 (82%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 SAIGFEGYEKRLE+TF E +F D G+GLRAL+ Sbjct: 4 SAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALA 37
>DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 368 Score = 50.4 bits (119), Expect = 4e-06 Identities = 23/34 (67%), Positives = 28/34 (82%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 SAIGFEG +RLE++F E S+F D HG+GLRALS Sbjct: 4 SAIGFEGLRERLEVSFFEPSLFLDTHGKGLRALS 37
>DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzyme 3 (EC| 4.1.1.50) (AdoMetDC 3) (SamDC 3) [Contains: S-adenosylmethionine decarboxylase 3 alpha chain; S-adenosylmethionine decarboxylase 3 beta chain] Length = 367 Score = 50.1 bits (118), Expect = 6e-06 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +2 Query: 539 SAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 SAIGFEGYEKRLE++F E S F D G GLRAL+ Sbjct: 4 SAIGFEGYEKRLEVSFFEPSFFQDSKGLGLRALT 37
>DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 536 TSAIGFEGYEKRLEITFNEASIFADPHGRGLRALS 640 TSAIGFEG+EKRLEI+F DP RGLR+L+ Sbjct: 2 TSAIGFEGFEKRLEISFFNPGPSVDPVARGLRSLT 36
>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C| Length = 162 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +2 Query: 221 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHIQT 334 AK+ A ++P C +LP TFD E ++S+ L+IQT Sbjct: 66 AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103
>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)| Length = 629 Score = 31.6 bits (70), Expect = 2.1 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -1 Query: 466 NWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSRSLNMQQKTSLRLQLVE 287 NWS + K +GG + NC + GK KAK + + + LN ++ ++L L LV Sbjct: 439 NWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLN-ERNSTLTLALVW 497 Query: 286 RL 281 +L Sbjct: 498 QL 499
>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H| antigen) Length = 2115 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -1 Query: 517 SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRM--A 344 ++ ++AEQ G E ERL + + Q +E G++E E + L +G+A+ D+ + A Sbjct: 969 AMEREAEQMGNELERLRAALMESQGQQQEERGQQERE---VARLTQERGRAQADLALEKA 1025 Query: 343 SSRSLNMQQKTSLRLQLVE 287 + L M+ + +L Q VE Sbjct: 1026 ARAELEMRLQNALNEQRVE 1044
>RS10_CHLPN (Q9Z803) 30S ribosomal protein S10| Length = 105 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +2 Query: 278 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 406 LK FDQ + RS ++TA+R+ +V PLP + Y +L Sbjct: 12 LKGFDQGQLDRSTADIVETAKRTGARVVGPIPLPTKREVYTVL 54
>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC| 1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde dehydrogenase 2) (NAGSA dehydrogenase 2) Length = 306 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = +2 Query: 311 SFLLHIQTARRSHPDIVFGFP 373 S LL TA R HPD VFGFP Sbjct: 76 SRLLDASTAHRIHPDWVFGFP 96
>MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle| myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin heavy chain, type A) (Nonmuscle myosin heavy chain-A) (NMMHC-A) Length = 1959 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 16/128 (12%) Frame = -1 Query: 631 AQATTMRVSKD*CLVEGDLEALLVALKPDRRGRGGHCCSLSQKAEQRGTEGERLENWS-- 458 + + +++++KD +E L+ L+ + R + L Q +++ E+LE Sbjct: 1292 SDSKSIKLAKDFSALESQLQDTQELLQEETRLKLSFSTKLKQTEDEKNALKEQLEEEEEA 1351 Query: 457 --------IIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSR------SLNMQ 320 +++QQA E + + C++I K K + D+ + R + + Sbjct: 1352 KRNLEKQISVLQQQAVEARKKMDDGLGCLEIAEEAKKKLQKDLESLTQRYEEKIAAYDKL 1411 Query: 319 QKTSLRLQ 296 +KT RLQ Sbjct: 1412 EKTKTRLQ 1419 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,023,235 Number of Sequences: 219361 Number of extensions: 1508293 Number of successful extensions: 4023 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3935 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4021 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)