ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C) 30 1.2
2E75BA_DROME (P17672) Ecdysone-induced protein 75B isoform A (E75-B) 30 1.2
3E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (... 30 1.2

>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)|
          Length = 1412

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3

Query: 42  SVHLPLSTGMEQQPEEVSLPSDPTHAKSDKISASNLLAGLFKGG 173
           S  L   +    QP+ VSLPS P    S   S++ LLA    GG
Sbjct: 848 SADLDYGSPSSSQPQGVSLPSPPQQQPSALASSAPLLAATLSGG 891



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>E75BA_DROME (P17672) Ecdysone-induced protein 75B isoform A (E75-B)|
          Length = 1355

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3

Query: 42  SVHLPLSTGMEQQPEEVSLPSDPTHAKSDKISASNLLAGLFKGG 173
           S  L   +    QP+ VSLPS P    S   S++ LLA    GG
Sbjct: 791 SADLDYGSPSSSQPQGVSLPSPPQQQPSALASSAPLLAATLSGG 834



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>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)|
          Length = 1199

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3

Query: 42  SVHLPLSTGMEQQPEEVSLPSDPTHAKSDKISASNLLAGLFKGG 173
           S  L   +    QP+ VSLPS P    S   S++ LLA    GG
Sbjct: 635 SADLDYGSPSSSQPQGVSLPSPPQQQPSALASSAPLLAATLSGG 678


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,878,760
Number of Sequences: 219361
Number of extensions: 822322
Number of successful extensions: 2038
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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