ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2f08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 1241 bits (626), Expect = 0.0 Identities = 626/626 (100%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 500 Query: 62 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 560 Query: 122 tgaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 tgaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgc 620 Query: 182 acgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgact 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 acgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgact 680 Query: 242 ggacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgtcagca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 ggacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgtcagca 740 Query: 302 acggcggctcctccgcgtgccccgccggcagcgacgcctggatgagcacggagctcgacg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 acggcggctcctccgcgtgccccgccggcagcgacgcctggatgagcacggagctcgacg 800 Query: 362 ccaaagccctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgca 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 ccaaagccctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgca 860 Query: 422 ccgacggctggcgcttccccaacggcttccccgccgagtgctcccgccgcaactgatcca 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 ccgacggctggcgcttccccaacggcttccccgccgagtgctcccgccgcaactgatcca 920 Query: 482 tcatcactttcttcttccttccttccctcctcgtcgttggtgttcttgtttgtccattcg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 tcatcactttcttcttccttccttccctcctcgtcgttggtgttcttgtttgtccattcg 980 Query: 542 attggagcgagacggacacacgttggctcatttcccatgtaagtacattttaccatggat 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 attggagcgagacggacacacgttggctcatttcccatgtaagtacattttaccatggat 1040 Query: 602 ttgattgttacagtgagtgttacagt 627 |||||||||||||||||||||||||| Sbjct: 1041 ttgattgttacagtgagtgttacagt 1066
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 858 bits (433), Expect = 0.0 Identities = 454/461 (98%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 489 Query: 62 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 549 Query: 122 tgaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 tgaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgc 609 Query: 182 acgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgact 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 acgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgact 669 Query: 242 ggacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgtcagca 301 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 670 ggacccaggcgcccttcgtcgtcaactaccgcggctactcctccaacggctgcgtcagca 729 Query: 302 acggcggctcctccgcgtgccccgccggcagcgacgcctggatgagcacggagctcgacg 361 ||||||||||||| || |||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 730 acggcggctcctcggcctgccccgccggcagcgacgcgtggatgaacacggagctcgacg 789 Query: 362 ccaaagccctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgca 421 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gcaaggccctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgca 849 Query: 422 ccgacggctggcgcttccccaacggcttccccgccgagtgc 462 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 ccgacggctggcgcttccccaacggcttccccgccgagtgc 890 Score = 54.0 bits (27), Expect = 6e-04 Identities = 40/44 (90%), Gaps = 4/44 (9%) Strand = Plus / Plus Query: 522 tgttcttgtttgtccattcgattggagcgagacggacacacgtt 565 ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 945 tgttcttgtttgtccattcgatt----cgagacggacacacgtt 984
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 819 bits (413), Expect = 0.0 Identities = 449/461 (97%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 489 Query: 62 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 549 Query: 122 tgaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgc 181 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 550 tgaggaccttcaagaagtacgacgacctgccgtacccgagcagccagcccatgacggtgc 609 Query: 182 acgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgact 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 acgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgact 669 Query: 242 ggacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgtcagca 301 ||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 670 ggagccaggcgcccttcgtcgtcaactaccgcggctactcctccaatggctgcgtcagca 729 Query: 302 acggcggctcctccgcgtgccccgccggcagcgacgcctggatgagcacggagctcgacg 361 |||||||||| || ||||||||||||||||||||||| ||||||| ||| |||||||||| Sbjct: 730 acggcggctcgtcggcgtgccccgccggcagcgacgcgtggatgaacacagagctcgacg 789 Query: 362 ccaaagccctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgca 421 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gcaaggccctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgca 849 Query: 422 ccgacggctggcgcttccccaacggcttccccgccgagtgc 462 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 ccgacggctggcgcttccccaacggcttccccgccgagtgc 890
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 787 bits (397), Expect = 0.0 Identities = 465/487 (95%), Gaps = 3/487 (0%) Strand = Plus / Plus Query: 1 ggcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttc 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ggcggcgacgggaagaaggagcaccagttctacctctggttcgaccccaccgccgacttc 487 Query: 61 cacacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccg 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 488 cacacctacaagatcgtctggaaccccaagaacatcatattccaggtcgacgacgtgccg 547 Query: 121 gtgaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtg 180 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 548 gtgaggaccttcaagaagtacgacgacctgccgtacccgagcagccagccgatgatggtg 607 Query: 181 cacgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgac 240 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 608 cacgccacgctctgggacggcagctactgggcgacccggcacggcgacgtcaagatcgac 667 Query: 241 tggacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgtcagc 300 |||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 668 tggagccaggcgccgttcgtcgtcaactaccgcggctactcctccaacggctgcgtcagc 727 Query: 301 aacggcggctcctccgcgtgccccgccggcagcgacgcctggatgagcacggagctcgac 360 | ||||||||| || ||||||||||||||||||||||| ||||||| ||||||||||| | Sbjct: 728 agcggcggctcgtcggcgtgccccgccggcagcgacgcgtggatgaacacggagctcggc 787 Query: 361 gccaaagccctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgc 420 | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 ggcaaggccctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgc 847 Query: 421 accgacggctggcgcttccccaacggcttccccgccgagtgctcccgccgcaactgatcc 480 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| Sbjct: 848 accgacggctggcgcttccccaacggattccccgccgagtgcac---ccgcaactgatcc 904 Query: 481 atcatca 487 ||||||| Sbjct: 905 atcatca 911
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 343 bits (173), Expect = 4e-91 Identities = 224/241 (92%) Strand = Plus / Plus Query: 4 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 490 Query: 64 acctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggtg 123 |||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 491 acctacaagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtg 550 Query: 124 aggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgcac 183 ||||||||||||||||||||||||||| |||||||| ||| ||||||||| | ||||| Sbjct: 551 aggacgttcaagaagtacgacgacctggcgtacccgcagagcaagccgatgaggctgcac 610 Query: 184 gccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactgg 243 || ||||| |||||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 611 gcgacgctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 670 Query: 244 a 244 | Sbjct: 671 a 671 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggc 429 |||||||||||||| ||||||||| |||| |||||||||||| |||||||| |||||||| Sbjct: 812 ctcggcaccgtcgcgtgggccgagcgcaactacatgtcctacaactactgcgccgacggc 871 Query: 430 tggcgcttccccaacggcttccccgccgagtgctcccgc 468 |||||||||||| | ||||||||||||||||||| |||| Sbjct: 872 tggcgcttcccccagggcttccccgccgagtgctaccgc 910
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 343 bits (173), Expect = 4e-91 Identities = 224/241 (92%) Strand = Plus / Plus Query: 4 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 495 Query: 64 acctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggtg 123 |||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 496 acctacaagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtg 555 Query: 124 aggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgcac 183 ||||||||||||||||||||||||||| |||||||| ||| ||||||||| | ||||| Sbjct: 556 aggacgttcaagaagtacgacgacctggcgtacccgcagagcaagccgatgaggctgcac 615 Query: 184 gccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactgg 243 || ||||| |||||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 616 gcgacgctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 675 Query: 244 a 244 | Sbjct: 676 a 676 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggc 429 |||||||||||||| ||||||||| |||| |||||||||||| |||||||| |||||||| Sbjct: 817 ctcggcaccgtcgcgtgggccgagcgcaactacatgtcctacaactactgcgccgacggc 876 Query: 430 tggcgcttccccaacggcttccccgccgagtgctcccgc 468 |||||||||||| | ||||||||||||||||||| |||| Sbjct: 877 tggcgcttcccccagggcttccccgccgagtgctaccgc 915
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 343 bits (173), Expect = 4e-91 Identities = 224/241 (92%) Strand = Plus / Plus Query: 4 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 486 Query: 64 acctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggtg 123 |||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 487 acctacaagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtg 546 Query: 124 aggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgcac 183 ||||||||||||||||||||||||||| |||||||| ||| ||||||||| | ||||| Sbjct: 547 aggacgttcaagaagtacgacgacctggcgtacccgcagagcaagccgatgaggctgcac 606 Query: 184 gccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactgg 243 || ||||| |||||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 607 gcgacgctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 666 Query: 244 a 244 | Sbjct: 667 a 667 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggc 429 |||||||||||||| ||||||||| |||| |||||||||||| |||||||| |||||||| Sbjct: 808 ctcggcaccgtcgcgtgggccgagcgcaactacatgtcctacaactactgcgccgacggc 867 Query: 430 tggcgcttccccaacggcttccccgccgagtgctcccgc 468 |||||||||||| | ||||||||||||||||||| |||| Sbjct: 868 tggcgcttcccccagggcttccccgccgagtgctaccgc 906
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 343 bits (173), Expect = 4e-91 Identities = 224/241 (92%) Strand = Plus / Plus Query: 4 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 495 Query: 64 acctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggtg 123 |||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 496 acctacaagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtg 555 Query: 124 aggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgcac 183 ||||||||||||||||||||||||||| |||||||| ||| ||||||||| | ||||| Sbjct: 556 aggacgttcaagaagtacgacgacctggcgtacccgcagagcaagccgatgaggctgcac 615 Query: 184 gccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactgg 243 || ||||| |||||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 616 gcgacgctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 675 Query: 244 a 244 | Sbjct: 676 a 676 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggc 429 |||||||||||||| ||||||||| |||| |||||||||||| |||||||| |||||||| Sbjct: 817 ctcggcaccgtcgcgtgggccgagcgcaactacatgtcctacaactactgcgccgacggc 876 Query: 430 tggcgcttccccaacggcttccccgccgagtgctcccgc 468 |||||||||||| | ||||||||||||||||||| |||| Sbjct: 877 tggcgcttcccccagggcttccccgccgagtgctaccgc 915
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 343 bits (173), Expect = 4e-91 Identities = 224/241 (92%) Strand = Plus / Plus Query: 4 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 490 Query: 64 acctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggtg 123 |||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 491 acctacaagatcatctggaatccccaaaacatcatattccaggtggacgacgtgccggtg 550 Query: 124 aggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgcac 183 ||||||||||||||||||||||||||| |||||||| ||| ||||||||| | ||||| Sbjct: 551 aggacgttcaagaagtacgacgacctggcgtacccgcagagcaagccgatgaggctgcac 610 Query: 184 gccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactgg 243 || ||||| |||||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 611 gcgacgctgtgggacggcagctactgggcgacgaggcacggcgacgtcaagatcgactgg 670 Query: 244 a 244 | Sbjct: 671 a 671 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggc 429 |||||||||||||| ||||||||| |||| |||||||||||| |||||||| |||||||| Sbjct: 812 ctcggcaccgtcgcgtgggccgagcgcaactacatgtcctacaactactgcgccgacggc 871 Query: 430 tggcgcttccccaacggcttccccgccgagtgctcccgc 468 |||||||||||| | ||||||||||||||||||| |||| Sbjct: 872 tggcgcttcccccagggcttccccgccgagtgctaccgc 910
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 299 bits (151), Expect = 6e-78 Identities = 259/295 (87%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||| Sbjct: 434 gcggcgacggcaagaaggagcaccagttctacctctggttcgatccctccgccgatttcc 493 Query: 62 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 121 |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 494 acacctacaagatcacctggaaccccaagaacatcatattcgaggtggacaacgtggcgg 553 Query: 122 tgaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgc 181 |||||||||||||||| ||||| |||||||||| ||||| ||| ||||||| ||||| Sbjct: 554 tgaggacgttcaagaactacgatgacctgccgttcccgacgagcaggccgatggaggtgc 613 Query: 182 acgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgact 241 |||| ||||| |||||||||||||||||||| || | |||||| ||||||||||| ||| Sbjct: 614 acgcgacgctgtgggacggcagctactgggcaacgcagcacggcaacgtcaagatccact 673 Query: 242 ggacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgt 296 ||| || | ||||||||| ||| |||||||| |||| | ||||||||||||| Sbjct: 674 ggaggcacgagcccttcgtggtctcctaccgcgcctaccacgccaacggctgcgt 728 Score = 79.8 bits (40), Expect = 1e-11 Identities = 112/136 (82%) Strand = Plus / Plus Query: 319 tgccccgccggcagcgacgcctggatgagcacggagctcgacgccaaagccctcggcacc 378 ||||||| |||| ||||||||||||| || |||||||| || | | | |||| |||| Sbjct: 751 tgccccgacggctccgacgcctggatgcacagggagctcggcgacgaggagctcgacacc 810 Query: 379 gtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggctggcgcttc 438 ||||||||| | ||| |||| | | |||||||| |||||||| ||||||||||||| ||| Sbjct: 811 gtcgcctggacggagcgcaactgcctgtcctacaactactgcgccgacggctggcggttc 870 Query: 439 cccaacggcttccccg 454 ||||| || ||||||| Sbjct: 871 cccaagggattccccg 886
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 417 gcggcgacggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttcc 476 Query: 62 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 121 |||||||||||||| |||||||| ||||||||||||||| ||||||||| |||||||| Sbjct: 477 acacctacaagatcacatggaacccaaagaacatcatattcgaggtggacggcgtgccgg 536 Query: 122 tgaggacgttcaagaagtacgacgacctgccgtacccgagcagc-cagccgatgacggtg 180 ||||||| |||||||||||||||| |||||||| |||| | || | ||||||||||||| Sbjct: 537 tgaggaccttcaagaagtacgacggcctgccgttcccg-tcggcgcggccgatgacggtg 595 Query: 181 cacgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgac 240 ||||| ||||| |||||||||||||||||||| || | |||||| |||||||||| || Sbjct: 596 cacgcgacgctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccac 655 Query: 241 tggacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgtc 297 ||| ||| | |||||||||||| ||||| |||||| | |||||||||||||| Sbjct: 656 tggcgccacgaccccttcgtcgtcccctaccagggctaccacgccaacggctgcgtc 712 Score = 103 bits (52), Expect = 7e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 319 tgccccgccggcagcgacgcctggatgagcacggagctcgacgccaaagccctcggcacc 378 ||||||||||||||||||||||||||| | |||||||||| | | ||| ||||| Sbjct: 740 tgccccgccggcagcgacgcctggatgcaccgcgagctcgacgacggcgagctcagcacc 799 Query: 379 gtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggctggcgcttc 438 ||||| ||||||||| |||| | | | |||||| |||||||| ||||||| ||||||||| Sbjct: 800 gtcgcgtgggccgagcgcaactgcctctcctacaactactgcgccgacggatggcgcttc 859 Query: 439 cccaacggcttccccgccgagtgc 462 ||||| |||||||||| ||||||| Sbjct: 860 cccaagggcttccccggcgagtgc 883
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 266 bits (134), Expect = 8e-68 Identities = 215/242 (88%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 426 gcggcgacggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttcc 485 Query: 62 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccgg 121 |||||||||||||| ||||||||||||||||||||| ||| |||| |||| |||||| | Sbjct: 486 acacctacaagatcacctggaaccccaagaacatcatcttcgaggtcgacggcgtgcccg 545 Query: 122 tgaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgc 181 || | || |||||||||||||||| |||||| | ||| ||||| ||| |||||||||| Sbjct: 546 tgcgcaccttcaagaagtacgacggcctgcccttcccctccagccggcccatgacggtgc 605 Query: 182 acgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgact 241 |||||||||| |||||||||||||||||||| || | |||||| |||||||||| ||| Sbjct: 606 acgccacgctgtgggacggcagctactgggcgacgcagcacggcaccgtcaagatccact 665 Query: 242 gg 243 || Sbjct: 666 gg 667 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 376 accgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggctggcgc 435 |||||||||||||||||| |||| | | | |||||| |||||||| ||||||||||| | Sbjct: 806 accgtcgcctgggccgagcgcaactgcctctcctacaactactgcgccgacggctggagg 865 Query: 436 ttccccaacggcttccccgccgagtg 461 |||||||| || ||||||| |||||| Sbjct: 866 ttccccaagggattccccggcgagtg 891 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 319 tgccccgccggcagcgacgcctggatg 345 ||||||||||||||||||||||||||| Sbjct: 749 tgccccgccggcagcgacgcctggatg 775
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 264 bits (133), Expect = 3e-67 Identities = 253/293 (86%) Strand = Plus / Plus Query: 3 cggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcca 62 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 494 cggcgacggcaagaaggagcaccagttctacctgtggttcgacccggccgccgacttcca 553 Query: 63 cacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggt 122 || |||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 554 caaatacaagatcgtctggaacgacaagaacatcatcttccaggtggacgacgtgacggt 613 Query: 123 gaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgca 182 | | |||||| ||||| ||||||||||||||| | | |||| ||| ||||||| Sbjct: 614 gcgcgtcttcaagcgctacgatgacctgccgtacccggacgccaagcccatggcggtgca 673 Query: 183 cgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactg 242 ||||||||| ||||||||||||||||||||||| ||| | ||||| |||||||||||||| Sbjct: 674 cgccacgctgtgggacggcagctactgggccacgcgcaagggcgaggtcaagatcgactg 733 Query: 243 gacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcg 295 | || ||||||||||||||| |||||| | ||||||| |||||| ||||| Sbjct: 734 gtccagcgcgcccttcgtcgtctcctaccgagactacaccgccaacgcctgcg 786
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 256 bits (129), Expect = 8e-65 Identities = 252/293 (86%) Strand = Plus / Plus Query: 3 cggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcca 62 |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 330 cggcgacggcaataaggagcaccagttctacctgtggttcgacccggccgccgacttcca 389 Query: 63 cacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgacgtgccggt 122 || |||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 390 caaatacaagatcgtctggaacgacaagaacatcatcttccaggtggacgacgtgacggt 449 Query: 123 gaggacgttcaagaagtacgacgacctgccgtacccgagcagccagccgatgacggtgca 182 | | |||||| ||||| ||||||||||||||| | | |||| ||| ||||||| Sbjct: 450 gcgcgtcttcaagcgctacgatgacctgccgtacccggacgccaagcccatggcggtgca 509 Query: 183 cgccacgctctgggacggcagctactgggccacccgccacggcgacgtcaagatcgactg 242 ||||||||| ||||||||||||||||||||||| ||| | ||||| |||||||||||||| Sbjct: 510 cgccacgctgtgggacggcagctactgggccacgcgcaagggcgaggtcaagatcgactg 569 Query: 243 gacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcg 295 | || ||||||||||||||| |||||| | ||||||| |||||| ||||| Sbjct: 570 gtccagcgcgcccttcgtcgtctcctaccgagactacaccgccaacgcctgcg 622
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 186 bits (94), Expect = 6e-44 Identities = 133/146 (91%) Strand = Plus / Plus Query: 99 attccaggtggacgacgtgccggtgaggacgttcaagaagtacgacgacctgccgtaccc 158 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 8322297 attccaggtggacgacgtgccggtgaggacgttcaagaagtacgacgacctggcgtaccc 8322356 Query: 159 gagcagccagccgatgacggtgcacgccacgctctgggacggcagctactgggccacccg 218 | ||| ||||||||| | ||||||| ||||| |||||||||||||||||||| || | Sbjct: 8322357 gcagagcaagccgatgaggctgcacgcgacgctgtgggacggcagctactgggcgacgag 8322416 Query: 219 ccacggcgacgtcaagatcgactgga 244 ||||||||||||||||||||||||| Sbjct: 8322417 gcacggcgacgtcaagatcgactgga 8322442 Score = 157 bits (79), Expect = 5e-35 Identities = 91/95 (95%) Strand = Plus / Plus Query: 4 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8322104 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 8322163 Query: 64 acctacaagatcgtctggaaccccaagaacatcat 98 |||||||||||| ||||||| ||| | |||||||| Sbjct: 8322164 acctacaagatcatctggaatccccaaaacatcat 8322198 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggc 429 |||||||||||||| ||||||||| |||| |||||||||||| |||||||| |||||||| Sbjct: 8322583 ctcggcaccgtcgcgtgggccgagcgcaactacatgtcctacaactactgcgccgacggc 8322642 Query: 430 tggcgcttccccaacggcttccccgccgagtgctcccgc 468 |||||||||||| | ||||||||||||||||||| |||| Sbjct: 8322643 tggcgcttcccccagggcttccccgccgagtgctaccgc 8322681 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 8378907 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 8378848 Query: 79 tggaaccccaagaacatcat 98 |||||||||||| ||||||| Sbjct: 8378847 tggaaccccaagcacatcat 8378828
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 186 bits (94), Expect = 6e-44 Identities = 133/146 (91%) Strand = Plus / Plus Query: 99 attccaggtggacgacgtgccggtgaggacgttcaagaagtacgacgacctgccgtaccc 158 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 62406 attccaggtggacgacgtgccggtgaggacgttcaagaagtacgacgacctggcgtaccc 62465 Query: 159 gagcagccagccgatgacggtgcacgccacgctctgggacggcagctactgggccacccg 218 | ||| ||||||||| | ||||||| ||||| |||||||||||||||||||| || | Sbjct: 62466 gcagagcaagccgatgaggctgcacgcgacgctgtgggacggcagctactgggcgacgag 62525 Query: 219 ccacggcgacgtcaagatcgactgga 244 ||||||||||||||||||||||||| Sbjct: 62526 gcacggcgacgtcaagatcgactgga 62551 Score = 157 bits (79), Expect = 5e-35 Identities = 91/95 (95%) Strand = Plus / Plus Query: 4 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62213 ggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttccac 62272 Query: 64 acctacaagatcgtctggaaccccaagaacatcat 98 |||||||||||| ||||||| ||| | |||||||| Sbjct: 62273 acctacaagatcatctggaatccccaaaacatcat 62307 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggc 429 |||||||||||||| ||||||||| |||| |||||||||||| |||||||| |||||||| Sbjct: 62692 ctcggcaccgtcgcgtgggccgagcgcaactacatgtcctacaactactgcgccgacggc 62751 Query: 430 tggcgcttccccaacggcttccccgccgagtgctcccgc 468 |||||||||||| | ||||||||||||||||||| |||| Sbjct: 62752 tggcgcttcccccagggcttccccgccgagtgctaccgc 62790 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119016 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 118957 Query: 79 tggaaccccaagaacatcat 98 |||||||||||| ||||||| Sbjct: 118956 tggaaccccaagcacatcat 118937
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 3 cggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcca 62 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 513 cggcgacggcaagaaggagcaccagttctacctgtggttcgacccggccgccgacttcca 572 Query: 63 cacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgac 114 |||||||| ||| |||||||| ||||||| |||| ||| ||||||||||| Sbjct: 573 cacctacaccatcatctggaacgacaagaacgtcatcttcaaggtggacgac 624 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 373 ggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggctgg 432 |||||||||||||||||| | || |||||| |||| |||||||| |||||||||| Sbjct: 889 ggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggctgg 948 Query: 433 cgcttccccaacggcttccccgccgagtgctcccgc 468 |||||||| | |||||||||||||||||||||||| Sbjct: 949 cgcttcccgcagggcttccccgccgagtgctcccgc 984 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 145 gacctgccgtacccgagcagccagccgatgacggtgcacgccacgctctgggacggcagc 204 |||||| |||||||| || | |||| ||| |||||||||||||||| |||||||||||| Sbjct: 655 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 714 Query: 205 tactgggccac 215 ||||||||||| Sbjct: 715 tactgggccac 725
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 127 bits (64), Expect = 5e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 3 cggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcca 62 |||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 35 cggcgacggctagaaggagcaccagttctacctgtggttcgacccggccgccgacttcca 94 Query: 63 cacctacaagatcgtctggaaccccaagaacatcatattccaggtggacgac 114 |||||||| ||| |||||||| ||||||| |||| ||| ||||||||||| Sbjct: 95 cacctacaccatcatctggaacgacaagaacgtcatcttcaaggtggacgac 146 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 145 gacctgccgtacccgagcagccagccgatgacggtgcacgccacgctctgggacggcagc 204 |||||| |||||||| || | |||| ||| |||||||||||||||| |||||||||||| Sbjct: 177 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 236 Query: 205 tactgggccac 215 ||||||||||| Sbjct: 237 tactgggccac 247 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 373 ggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgcaccgacggctgg 432 |||||||||||||||||| | || |||||| |||| |||||||| |||||||||| Sbjct: 411 ggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggctgg 470 Query: 433 cgcttccccaacggcttccccgccgagtgctcccgc 468 || ||||| | |||||||||||||||||||||||| Sbjct: 471 cgattcccgcagggcttccccgccgagtgctcccgc 506
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 473 gcggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactacc 532 Query: 62 acacctacaagatcgtctggaaccccaagaacatcatattccaggtggacg 112 ||||||||| ||| |||||||||| | |||||| | ||| ||||||||| Sbjct: 533 acacctacaccatcatctggaacccgaccaacatcctgttcaaggtggacg 583 Score = 77.8 bits (39), Expect = 4e-11 Identities = 71/79 (89%), Gaps = 2/79 (2%) Strand = Plus / Plus Query: 139 tacgacgacctgccgtacccgagcagccag-ccgatgacggtgcacgccacgctctggga 197 |||| ||||||||||||||||||| || || || ||| || ||||||||||||| ||||| Sbjct: 610 tacgccgacctgccgtacccgagc-gcgaggcccatggcgctgcacgccacgctgtggga 668 Query: 198 cggcagctactgggccacc 216 ||||||||||||||||||| Sbjct: 669 cggcagctactgggccacc 687 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 385 tgggccgagagcaagtacatgtcctacgactactgcaccgacggctggcgcttccccaac 444 |||||||||||||| |||||| |||| |||||||| |||||||||||| |||||| | Sbjct: 850 tgggccgagagcaactacatgcgctacaactactgcgacgacggctggcggttcccccag 909 Query: 445 ggcttccccgccgagtgc 462 ||| |||| |||||||| Sbjct: 910 ggcctcccgcccgagtgc 927 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 250 gcgcccttcgtcgtcaactaccgcggctacacctccaacggctgcgtcagc 300 ||||||||||||||| |||||| |||||| || |||||| |||||||||| Sbjct: 721 gcgcccttcgtcgtctcctaccggggctactccgccaacgcctgcgtcagc 771
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 121 bits (61), Expect = 3e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 498 gcggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactacc 557 Query: 62 acacctacaagatcgtctggaaccc 86 ||||||||| ||| |||||||||| Sbjct: 558 acacctacaccatcatctggaaccc 582 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 139 tacgacgacctgccgtacccgagcagcca-gccgatgacggtgcacgccacgctct-ggg 196 |||| ||||||||||||||||||| || | ||| ||| || ||||||||||||| | ||| Sbjct: 635 tacgccgacctgccgtacccgagc-gcgaggcccatggcgctgcacgccacgctgtgggg 693 Query: 197 acggcagctactggg 211 ||||||||||||||| Sbjct: 694 acggcagctactggg 708
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 121 bits (61), Expect = 3e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 2 gcggcgacggcaagaaggagcaccagttctacctctggttcgaccccaccgccgacttcc 61 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 469 gcggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactacc 528 Query: 62 acacctacaagatcgtctggaaccc 86 ||||||||| ||| |||||||||| Sbjct: 529 acacctacaccatcatctggaaccc 553 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 139 tacgacgacctgccgtacccgagcagccagccgatgacggtgcacgccacgctctgggac 198 |||| ||||||||||||||||||| | ||| |||||| ||||||||||||| |||||| Sbjct: 606 tacgccgacctgccgtacccgagctccaggcccatgacgctgcacgccacgctgtgggac 665 Query: 199 ggcagctactgggccacc 216 |||||||||||||||||| Sbjct: 666 ggcagctactgggccacc 683 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Plus Query: 235 atcgactggacccaggcgcccttcgtcgtcaactaccgcggctacacctccaacggctgc 294 ||||||||| || | ||||||||||||||| ||||||| ||||| | ||| || |||| Sbjct: 702 atcgactggtccgacgcgcccttcgtcgtctcctaccgcagctactacgccagcgcctgc 761 Query: 295 gtcagc 300 |||||| Sbjct: 762 gtcagc 767
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 439 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 498 Query: 79 tggaaccccaagaacatcatattccaggtggacgacgtgccg 120 |||||||||||| |||||||| | | |||||||| ||||||| Sbjct: 499 tggaaccccaagcacatcataattctggtggacggcgtgccg 540
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 429 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 488 Query: 78 ctggaaccccaagaacatcatattccaggtggacg 112 |||||||||| |||||||| ||| |||||||| Sbjct: 489 ctggaaccccctcaacatcatcttctcggtggacg 523
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 497 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 556 Query: 78 ctggaaccccaagaacatcatattccaggtggacg 112 |||||||||| |||||||| ||| |||||||| Sbjct: 557 ctggaaccccctcaacatcatcttctcggtggacg 591
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 32621 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 32562 Query: 78 ctggaacccc 87 |||||||||| Sbjct: 32561 ctggaacccc 32552 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| |||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 29252 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 29311 Query: 79 tggaaccccaag 90 |||||||||||| Sbjct: 29312 tggaaccccaag 29323
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 30556913 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 30556854 Query: 78 ctggaacccc 87 |||||||||| Sbjct: 30556853 ctggaacccc 30556844 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| |||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 30553544 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 30553603 Query: 79 tggaaccccaag 90 |||||||||||| Sbjct: 30553604 tggaaccccaag 30553615 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 30516931 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 30516872 Query: 79 tgga 82 |||| Sbjct: 30516871 tgga 30516868 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacacctac 69 |||| ||||||||||||||||||||||||||||||||| Sbjct: 32180527 acctgtggttcgaccccaccgccgacttccacacctac 32180564 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgc 420 |||||||| ||||||| | ||||| |||| |||||||||||| |||||||| Sbjct: 33677755 ctcggcactgtcgcctagcccgagcgcaactacatgtcctacaactactgc 33677805
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 527 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcct 586 Query: 78 ctggaaccccaagaacatcatattccaggtggacgacgtgcc 119 ||||||||||||| || |||| ||| |||||||||| |||| Sbjct: 587 ctggaaccccaagcacgtcatcttcatggtggacgacatgcc 628 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 395 gcaagtacatgtcctacgactactgcaccgac 426 ||||||||||| |||| |||||||||||||| Sbjct: 955 gcaagtacatgatctacaactactgcaccgac 986
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| |||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 418 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 477 Query: 79 tggaaccccaag 90 |||||||||||| Sbjct: 478 tggaaccccaag 489
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 34 ctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaag 90 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 262 ctctggttcgaccccaccgccgacttccacacctacgccatcctctggaaccccaag 318
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 385 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 444 Query: 79 tgga 82 |||| Sbjct: 445 tgga 448
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 69 |||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 706 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 655
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 150308 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 150249 Query: 79 tgga 82 |||| Sbjct: 150248 tgga 150245
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 457 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 516 Query: 79 tgga 82 |||| Sbjct: 517 tgga 520
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 33 cctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaagaa 92 |||||||| |||||||||| ||||||||||||||| ||| |||||||||||||| | Sbjct: 502 cctctggtacgaccccaccaaggacttccacacctactccatcctctggaaccccaagca 561 Query: 93 catcatattccaggtggacgacgtgccg 120 |||||||||| |||||||||| ||||| Sbjct: 562 catcatattcatggtggacgacatgccg 589 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 392 agagcaagtacatgtcctacgactactgcaccgacggctggcgcttccccaacggcttcc 451 |||||||||||||| |||| ||||||||||||| | |||||||||| | ||| ||| Sbjct: 912 agagcaagtacatgatctacaactactgcaccgatcccaagcgcttcccccagggcgtcc 971 Query: 452 ccgccgagtgctcc 465 |||||||||||||| Sbjct: 972 ccgccgagtgctcc 985
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 475 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 534 Query: 79 tgga 82 |||| Sbjct: 535 tgga 538
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 69 |||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 498 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 549
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||| |||||||||||| |||||| |||||||||||||||| ||| | Sbjct: 423 ggagcaacagttccgcctctggttcgatcccaccaacgacttccacacctactccatcct 482 Query: 78 ctggaaccccaagaacatcatattccaggtggacgacgtgccg 120 ||||||||| ||| ||||||| ||| |||||||||| ||||| Sbjct: 483 ctggaacccaaagcacatcatcttcatggtggacgacatgccg 525 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Plus Query: 392 agagcaagtacatgtcctacgactactgcaccgacggctggcgcttccccaacggcttcc 451 ||||||| |||||| |||| |||||||||| ||| | |||| || |||| ||| ||| Sbjct: 848 agagcaattacatgatctacaactactgcactgaccccaagcgcgtcgccaagggcgtcc 907 Query: 452 ccgccgagtgctcc 465 |||||||||||||| Sbjct: 908 ccgccgagtgctcc 921
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 34 ctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 28754822 ctctggttcgaccccaccgccgacttccacacctactccatcctctggaaccc 28754874 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 33 cctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaagaa 92 |||||||| |||||||||| ||||||||||||||| ||| |||||||||||||| | Sbjct: 28773645 cctctggtacgaccccaccaaggacttccacacctactccatcctctggaaccccaagca 28773586 Query: 93 catcat 98 |||||| Sbjct: 28773585 catcat 28773580 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 392 agagcaagtacatgtcctacgactactgcaccgacggctggcgcttccccaacggcttcc 451 |||||||||||||| |||| ||||||||||||| | |||||||||| | ||| ||| Sbjct: 28773145 agagcaagtacatgatctacaactactgcaccgatcccaagcgcttcccccagggcgtcc 28773086 Query: 452 ccgccgagtgctcc 465 |||||||||||||| Sbjct: 28773085 ccgccgagtgctcc 28773072 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 36 ctggttcgaccccaccgccgacttccacacctacaagatcgtctggaacccc 87 ||||||||||||||||| || || ||||| ||||| ||| ||||||||||| Sbjct: 13230512 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaacccc 13230563 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 33 cctctggttcgaccccaccgccgacttcca 62 |||||||||||||||| | ||||||||||| Sbjct: 7156118 cctctggttcgaccccgctgccgacttcca 7156089 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccacc 51 ||||| |||||| ||||||||||||||||||| Sbjct: 28750067 gagcagcagttccgcctctggttcgaccccacc 28750099
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 34 ctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 62597 ctctggttcgaccccaccgccgacttccacacctactccatcctctggaaccc 62649 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 33 cctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaagaa 92 |||||||| |||||||||| ||||||||||||||| ||| |||||||||||||| | Sbjct: 81420 cctctggtacgaccccaccaaggacttccacacctactccatcctctggaaccccaagca 81361 Query: 93 catcat 98 |||||| Sbjct: 81360 catcat 81355 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 392 agagcaagtacatgtcctacgactactgcaccgacggctggcgcttccccaacggcttcc 451 |||||||||||||| |||| ||||||||||||| | |||||||||| | ||| ||| Sbjct: 80920 agagcaagtacatgatctacaactactgcaccgatcccaagcgcttcccccagggcgtcc 80861 Query: 452 ccgccgagtgctcc 465 |||||||||||||| Sbjct: 80860 ccgccgagtgctcc 80847 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccacc 51 ||||| |||||| ||||||||||||||||||| Sbjct: 57842 gagcagcagttccgcctctggttcgaccccacc 57874
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 34 ctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 155388 ctctggttcgaccccaccgccgacttccacacctactccatcctctggaaccc 155440 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccacc 51 ||||| |||||| ||||||||||||||||||| Sbjct: 150633 gagcagcagttccgcctctggttcgaccccacc 150665
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 26 agttctacctctggttcgaccccaccgccgacttccac 63 ||||| |||||||||||||||||||||||||||||||| Sbjct: 497 agttccacctctggttcgaccccaccgccgacttccac 534
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 37 tggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaag 90 ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 454 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccccaag 507
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 37 tggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaag 90 ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccccaag 599
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacacctac 69 |||| ||||||||||||||||||||||||||||||||| Sbjct: 76216 acctgtggttcgaccccaccgccgacttccacacctac 76253
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 37 tggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaag 90 ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 20676569 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccccaag 20676622 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaacccc 87 |||||||||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 17438397 acctctggttcgaccccaccgccgacttccaccactacgccatcctctggaacccc 17438452
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 26 agttctacctctggttcgaccccaccgccgacttccac 63 ||||| |||||||||||||||||||||||||||||||| Sbjct: 35396754 agttccacctctggttcgaccccaccgccgacttccac 35396717 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 223 ggcgacgtcaagatcgactgga 244 |||||||||||||||||||||| Sbjct: 30350800 ggcgacgtcaagatcgactgga 30350821
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 37 tggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaag 90 ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 29319 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccccaag 29372
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 26 agttctacctctggttcgaccccaccgccgacttccac 63 ||||| |||||||||||||||||||||||||||||||| Sbjct: 8275 agttccacctctggttcgaccccaccgccgacttccac 8238
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 26 agttctacctctggttcgaccccaccgccgacttccac 63 ||||| |||||||||||||||||||||||||||||||| Sbjct: 57302 agttccacctctggttcgaccccaccgccgacttccac 57265
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 37 tggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaag 90 ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccccaag 599
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacacctac 69 |||| ||||||||||||||||||||||||||||||||| Sbjct: 438 acctgtggttcgaccccaccgccgacttccacacctac 475
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 37 tggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaag 90 ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 640 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccccaag 693
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacacctac 69 |||| ||||||||||||||||||||||||||||||||| Sbjct: 442 acctgtggttcgaccccaccgccgacttccacacctac 479
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacacctac 69 |||| ||||||||||||||||||||||||||||||||| Sbjct: 31703 acctgtggttcgaccccaccgccgacttccacacctac 31740
>ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 27 gttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||| Sbjct: 348 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 407 Query: 87 c 87 | Sbjct: 408 c 408
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 27 gttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||| Sbjct: 471775 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 471716 Query: 87 c 87 | Sbjct: 471715 c 471715
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 228 cgtcaagatcgactggacccaggcgcccttcgtcgtcaactaccgcggc 276 |||||||| |||||||||||| ||||||||||||| |||||||| |||| Sbjct: 732 cgtcaagaccgactggacccacgcgcccttcgtcgccaactaccacggc 780
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 27 gttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||| Sbjct: 471773 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 471714 Query: 87 c 87 | Sbjct: 471713 c 471713
>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full insert sequence Length = 1281 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 27 gttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||| Sbjct: 668 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 727 Query: 87 c 87 | Sbjct: 728 c 728
>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full insert sequence Length = 1186 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 27 gttctacctctggttcgaccccaccgccgacttccac 63 |||| |||||||||||||||||||||||||||||||| Sbjct: 573 gttccacctctggttcgaccccaccgccgacttccac 609
>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full insert sequence Length = 1193 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 27 gttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||| Sbjct: 580 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 639 Query: 87 c 87 | Sbjct: 640 c 640
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 27 gttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||| Sbjct: 70235 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 70176 Query: 87 c 87 | Sbjct: 70175 c 70175
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||||||||||| Sbjct: 482 acctctggttcgaccccaccgccgacttccac 513
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaacccc 87 |||||||||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct: 106621 acctctggttcgaccccaccgccgacttccaccactacgccatcctctggaacccc 106676
>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to marker R11, genomic sequence Length = 224 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 392 agagcaagtacatgtcctacgactactgcaccgacggctggcgcttccccaacggcttcc 451 |||||||||||||| |||| ||||||||||||| | |||||||||| | ||| ||| Sbjct: 5 agagcaagtacatgatctacaactactgcaccgatcccaagcgcttcccccagggcgtcc 64 Query: 452 ccgccgagtgctcc 465 |||||||||||||| Sbjct: 65 ccgccgagtgctcc 78
>ref|NM_197613.1| Oryza sativa (japonica cultivar-group) putative cellulase (OSJNBa0001O14.5), mRNA Length = 969 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccccaaga 91 |||||||||||||||||||||||| ||||||| |||| ||| ||||||||||| | Sbjct: 539 acctctggttcgaccccaccgccggcttccaccactacgccatcctctggaaccccgacc 598 Query: 92 acatcatattccaggtggacgacgtgccg 120 | ||| | ||| |||||||||||||||| Sbjct: 599 aaatcttgttcttggtggacgacgtgccg 627
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||| ||||||| Sbjct: 64150 acctctggttcgaccccaccgccggcttccac 64181
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||| ||||||| Sbjct: 20801751 acctctggttcgaccccaccgccggcttccac 20801782 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ggcggcgacggcaagaagga 20 |||||||||||||||||||| Sbjct: 20183561 ggcggcgacggcaagaagga 20183542 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ggcggcgacggcaagaagga 20 |||||||||||||||||||| Sbjct: 20183537 ggcggcgacggcaagaagga 20183518
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccac 63 |||||||||||||||||||||||| ||||||| Sbjct: 20813015 acctctggttcgaccccaccgccggcttccac 20813046 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ggcggcgacggcaagaagga 20 |||||||||||||||||||| Sbjct: 20194837 ggcggcgacggcaagaagga 20194818 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ggcggcgacggcaagaagga 20 |||||||||||||||||||| Sbjct: 20194813 ggcggcgacggcaagaagga 20194794
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||| ||||||||||||||||||| | ||||||||||||| ||| | Sbjct: 484 ggagcagcagttccgcctctggttcgaccccaccaaggccttccacacctactccatcat 543 Query: 78 ctggaaccccaagaacatcatattccaggtggacg 112 ||||||||| || || |||||||| |||||||| Sbjct: 544 ctggaacccgcagcacgtcatattcgcggtggacg 578
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgc 420 |||||||| ||||||| | ||||| |||| |||||||||||| |||||||| Sbjct: 108815 ctcggcactgtcgcctagcccgagcgcaactacatgtcctacaactactgc 108865
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgc 420 |||||||| ||||||| | ||||| |||| |||||||||||| |||||||| Sbjct: 28198 ctcggcactgtcgcctagcccgagcgcaactacatgtcctacaactactgc 28248
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 370 ctcggcaccgtcgcctgggccgagagcaagtacatgtcctacgactactgc 420 |||||||| ||||||| | ||||| |||| |||||||||||| |||||||| Sbjct: 108933 ctcggcactgtcgcctagcccgagcgcaactacatgtcctacaactactgc 108983
>dbj|AB197670.1| Cryptomeria japonica mRNA for pollen major allergen No.121 isoform 1, complete cds Length = 1155 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacac 65 ||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 521 gagcagcaattctacctctggttcgatcccactgcagacttccacac 567
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||| ||||||||||||||||||| | ||||||||||||| ||| | Sbjct: 378 ggagcagcagttccgcctctggttcgaccccaccaaggccttccacacctactccatcat 437 Query: 78 ctggaaccccaagaacatcatattccaggtggacg 112 ||||||||| || || |||||||| |||||||| Sbjct: 438 ctggaacccgcagcacgtcatattcgcggtggacg 472
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 32 acctctggttcgaccccaccgccgacttccacac 65 |||| |||||||||||||| |||||||||||||| Sbjct: 497 acctgtggttcgaccccacggccgacttccacac 530
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccacc 51 |||||| |||||||| |||||||||||||||||| Sbjct: 428 ggagcaacagttctatctctggttcgaccccacc 461
>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence Length = 250215 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 480 catcatcactttcttcttccttccttccctcct 512 ||||||| |||||||||||||||||||| |||| Sbjct: 127116 catcatctctttcttcttccttccttccttcct 127084 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ttcttccttccttccctcct 512 |||||||||||||||||||| Sbjct: 57061 ttcttccttccttccctcct 57080
>gb|AY043237.1| Vitis vinifera putative xyloglucan endotransglycosylase XET1 mRNA, partial cds Length = 451 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccac 50 |||||| || ||||||||||||||||||||||| Sbjct: 70 ggagcaacaattctacctctggttcgaccccac 102
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 77 |||||| |||||| ||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 541 ggagcagcagttccgcctgtggttcgaccccaccaaggacttccacacctacggcgtcgt 600 Query: 78 ctggaaccc 86 ||||||||| Sbjct: 601 ctggaaccc 609
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete sequence Length = 172826 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 487 actttcttcttccttccttccctcc 511 ||||||||||||||||||||||||| Sbjct: 62362 actttcttcttccttccttccctcc 62338
>emb|AL049767.12|HSJ172H20 Human DNA sequence from clone RP1-172H20 on chromosome 20q12-13.12 Contains the PI3 gene for skin-derived protease inhibitor 3 (SKALP)the SEMG1 gene for semenogelin I, the SEMG2 gene for semenogelin II, complete sequence Length = 99747 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcc 511 |||||||||||||||||||||||| Sbjct: 86651 ctttcttcttccttccttccctcc 86628
>gb|DQ100337.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH1) mRNA, partial cds Length = 746 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacac 65 |||||| || ||||| |||||||||||||| || ||||| |||||||| Sbjct: 87 ggagcagcaattctatctctggttcgacccgacagccgatttccacac 134
>emb|X96421.1|HSCAMF3X1 H.sapiens Y chromosome cosmid cAMF3.1 containing Yp pseudoautosomal boundary, PAB1 Length = 41154 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcc 511 |||||||||||||||||||||||| Sbjct: 26745 ctttcttcttccttccttccctcc 26768
>emb|Z47556.1|HSSG1SG2 H.sapiens genes for semenogelin I and semenogelin II Length = 28069 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcc 511 |||||||||||||||||||||||| Sbjct: 12074 ctttcttcttccttccttccctcc 12051
>gb|DP000037.1| Pan troglodytes target 106 genomic scaffold Length = 302717 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcc 511 |||||||||||||||||||||||| Sbjct: 247312 ctttcttcttccttccttccctcc 247289
>gb|AC006209.25| Homo sapiens X BAC GS1-546D14 (Genome Systems Human Bac Library) complete sequence Length = 141759 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcc 511 |||||||||||||||||||||||| Sbjct: 31556 ctttcttcttccttccttccctcc 31579
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 37 tggttcgaccccaccgccgacttccacacctacaagatcgtctggaacccca 88 ||||||||||||||| |||||||||||||| |||| |||||||||||| Sbjct: 646 tggttcgaccccaccaaggacttccacacctattcgatcctctggaacccca 697
>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence Length = 186504 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcc 511 |||||||||||||||||||||||| Sbjct: 49172 ctttcttcttccttccttccctcc 49149
>gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, complete sequence Length = 166305 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 489 tttcttcttccttccttccctcct 512 |||||||||||||||||||||||| Sbjct: 100597 tttcttcttccttccttccctcct 100574
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 36 ctggttcgaccccaccgccgacttccacacctacaagatcgtctggaacccc 87 ||||||||||||||||| || || ||||| ||||| ||| ||||||||||| Sbjct: 147700 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaacccc 147751
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 36 ctggttcgaccccaccgccgacttccacacctacaagatcgtctggaacccc 87 ||||||||||||||||| || || ||||| ||||| ||| ||||||||||| Sbjct: 753 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaacccc 804
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 69 |||||| |||||| ||||||||||||||| ||| | | ||||||||||||| Sbjct: 509 ggagcagcagttccgcctctggttcgaccctaccactgccttccacacctac 560
>gb|AC144767.4| Mus musculus BAC clone RP23-82F8 from chromosome 6, complete sequence Length = 229027 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 490 ttcttcttccttccttccctcct 512 ||||||||||||||||||||||| Sbjct: 43506 ttcttcttccttccttccctcct 43484 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttcc 507 |||||||||||||||||||| Sbjct: 43729 ctttcttcttccttccttcc 43710
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 tctacctctggttcgaccccacc 51 ||||||||||||||||||||||| Sbjct: 113577 tctacctctggttcgaccccacc 113599
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 tctacctctggttcgaccccacc 51 ||||||||||||||||||||||| Sbjct: 13196 tctacctctggttcgaccccacc 13218
>gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence Length = 765 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 69 ||||| ||| ||||||| |||||||| |||||| ||||||||||||||| Sbjct: 88 gagcaacagctctacctttggttcgatcccaccaaagacttccacacctac 138
>gb|AY498860.1| Homo sapiens tumor necrosis factor receptor superfamily, member 8 (TNFRSF8) gene, complete cds Length = 84102 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 489 tttcttcttccttccttccctcc 511 ||||||||||||||||||||||| Sbjct: 11342 tttcttcttccttccttccctcc 11364
>gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, complete sequence Length = 293822 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 490 ttcttcttccttccttccctcct 512 ||||||||||||||||||||||| Sbjct: 95316 ttcttcttccttccttccctcct 95338
>gb|AC161761.3| Mus musculus BAC clone RP23-379E17 from chromosome 3, complete sequence Length = 205852 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 495 cttccttccttccctcctcgtcgttggtgtt 525 ||||||||||||||||||||| |||| |||| Sbjct: 133846 cttccttccttccctcctcgttgttgttgtt 133876
>gb|AC119163.23| Mus musculus chromosome 3, clone RP24-527P22, complete sequence Length = 202675 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 495 cttccttccttccctcctcgtcgttggtgtt 525 ||||||||||||||||||||| |||| |||| Sbjct: 15313 cttccttccttccctcctcgttgttgttgtt 15343
>emb|AL357835.11| Human DNA sequence from clone RP11-426M1 on chromosome 1 Contains the TNFRSF8 gene for tumor necrosis factor receptor superfamily member 8, a ribosomal protein L23a (RPL23A) pseudogene, the 5' end of the TNFRSF1B gene for tumor necrosis factor receptor superfamily member 1B and three CpG islands, complete sequence Length = 151498 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 489 tttcttcttccttccttccctcc 511 ||||||||||||||||||||||| Sbjct: 26964 tttcttcttccttccttccctcc 26986
>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete Sequence, complete sequence Length = 192227 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 490 ttcttcttccttccttccctcct 512 ||||||||||||||||||||||| Sbjct: 102521 ttcttcttccttccttccctcct 102543 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttcc 507 |||||||||||||||||||| Sbjct: 102298 ctttcttcttccttccttcc 102317
>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence Length = 191467 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 490 ttcttcttccttccttccctcct 512 ||||||||||||||||||||||| Sbjct: 20499 ttcttcttccttccttccctcct 20521 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttcc 507 |||||||||||||||||||| Sbjct: 20276 ctttcttcttccttccttcc 20295
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 tctacctctggttcgaccccacc 51 ||||||||||||||||||||||| Sbjct: 19010379 tctacctctggttcgaccccacc 19010401 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 40 ttcgaccccaccgccgacttccacaccta 68 |||||||| | |||||||||||||||||| Sbjct: 7152003 ttcgacccaatcgccgacttccacaccta 7151975
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 33 cctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaacccc 87 |||||||| |||||||||| ||||||||||||||| ||| ||||||||||| Sbjct: 512 cctctggtacgaccccaccaaggacttccacacctactccatcctctggaacccc 566
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 tctacctctggttcgaccccacc 51 ||||||||||||||||||||||| Sbjct: 446 tctacctctggttcgaccccacc 468
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 tctacctctggttcgaccccacc 51 ||||||||||||||||||||||| Sbjct: 443 tctacctctggttcgaccccacc 465
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 tctacctctggttcgaccccacc 51 ||||||||||||||||||||||| Sbjct: 466 tctacctctggttcgaccccacc 488
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 tctacctctggttcgaccccacc 51 ||||||||||||||||||||||| Sbjct: 19169028 tctacctctggttcgaccccacc 19169050 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 40 ttcgaccccaccgccgacttccacaccta 68 |||||||| | |||||||||||||||||| Sbjct: 7217974 ttcgacccaatcgccgacttccacaccta 7217946
>ref|NM_125135.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT5G57540 mRNA, complete cds Length = 855 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 25 cagttctacctctggttcgaccccaccgccgacttccacacctaca 70 |||||||| |||||||| || ||||| || || ||||||||||||| Sbjct: 391 cagttctatctctggtttgatcccactgctgatttccacacctaca 436
>gb|AC146127.4| Pan troglodytes BAC clone RP43-23F10 from 7, complete sequence Length = 190149 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcctc 513 |||||||||||||||||||| ||||| Sbjct: 29584 ctttcttcttccttccttccttcctc 29559
>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence Length = 215112 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 486 cactttcttcttccttccttcc 507 |||||||||||||||||||||| Sbjct: 182264 cactttcttcttccttccttcc 182243
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 44.1 bits (22), Expect = 0.55 Identities = 76/94 (80%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| ||||||||||||||||||| ||||||||||||| ||| || Sbjct: 373 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 432 Query: 79 tggaaccccaagaacatcatattccaggtggacg 112 |||||||| || || |||||||| |||||||| Sbjct: 433 tggaacccacagcacgtcatattcgcggtggacg 466
>gb|AC112942.11| Mus musculus chromosome 7, clone RP23-449N21, complete sequence Length = 162570 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 actttcttcttccttccttccctcct 512 ||||||||||||||||||||| |||| Sbjct: 78862 actttcttcttccttccttccttcct 78837
>gb|AF246928.2| Homo sapiens chromosome 21 clone SCb-318B17 map p11-q21.1, complete sequence Length = 171914 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 atttcccatgtaagtacatttt 592 |||||||||||||||||||||| Sbjct: 29052 atttcccatgtaagtacatttt 29073
>gb|AC146006.2| Pan troglodytes BAC clone RP43-165A19 from 7, complete sequence Length = 211780 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcctc 513 |||||||||||||||||||| ||||| Sbjct: 210482 ctttcttcttccttccttccttcctc 210507
>gb|AC125466.4| Mus musculus BAC clone RP23-477O24 from chromosome 9, complete sequence Length = 150128 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccct 509 |||||||||||||||||||||| Sbjct: 139083 ctttcttcttccttccttccct 139104 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 146823 ctttcttcttccttccttccttcct 146799 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 146760 ctttcttcttccttccttccttcct 146736
>gb|AC146483.2| Pan troglodytes BAC clone RP43-30K12 from 7, complete sequence Length = 208066 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcctc 513 |||||||||||||||||||| ||||| Sbjct: 93925 ctttcttcttccttccttccttcctc 93900
>emb|AL451103.7| Human DNA sequence from clone RP11-172M3 on chromosome Xp21.1-21.2 Contains a CpG island, complete sequence Length = 175384 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcctc 513 |||||| ||||||||||||||||||| Sbjct: 148369 ctttctccttccttccttccctcctc 148394
>emb|X79465.1|CMVDNA Cauliflower Mosaic Virus strain B29 complete DNA sequence Length = 8031 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 475 tgatccatcatcactttcttct 496 |||||||||||||||||||||| Sbjct: 3640 tgatccatcatcactttcttct 3619
>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence Length = 185644 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcctc 513 |||||| ||||||||||||||||||| Sbjct: 50910 ctttctccttccttccttccctcctc 50935 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcctc 513 ||||||||||||||||||||| Sbjct: 173794 ttcttccttccttccctcctc 173774
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 18 ggagcaccagttctacctctggttcgaccccacc 51 |||||| ||||||||||| ||||| ||||||||| Sbjct: 143 ggagcagcagttctacctgtggtttgaccccacc 176
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 491 tcttcttccttccttccctcct 512 |||||||||||||||||||||| Sbjct: 40510 tcttcttccttccttccctcct 40531
>gb|AC079127.28| Homo sapiens 12 BAC RP11-143P3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccct 509 |||||||||||||||||||||| Sbjct: 49030 ctttcttcttccttccttccct 49009
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 487 actttcttcttccttccttccctcct 512 ||||||||||||||||||||| |||| Sbjct: 69187 actttcttcttccttccttccttcct 69212
>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence Length = 193681 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcctc 513 |||||| ||||||||||||||||||| Sbjct: 126422 ctttctccttccttccttccctcctc 126447
>gb|AC012504.7| Homo sapiens BAC clone RP11-469O11 from 4, complete sequence Length = 205886 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 485 tcactttcttcttccttccttccctc 510 |||||||| ||||||||||||||||| Sbjct: 190200 tcactttcgtcttccttccttccctc 190225
>gb|AC025471.6| Homo sapiens chromosome 5 clone RP11-138C1, complete sequence Length = 148607 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcctc 513 |||||||||||||||||||| ||||| Sbjct: 56721 ctttcttcttccttccttccttcctc 56696
>gb|AC008968.6| Homo sapiens chromosome 5 clone CTD-2367F19, complete sequence Length = 92998 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcctc 513 |||||||||||||||||||| ||||| Sbjct: 46159 ctttcttcttccttccttccttcctc 46134
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 44.1 bits (22), Expect = 0.55 Identities = 52/62 (83%) Strand = Plus / Plus Query: 25 cagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaac 84 |||||| ||||||||||||| |||||| ||||| ||||| |||| ||| |||||||| Sbjct: 173 cagttccacctctggttcgatcccaccaaggactttcacacttacactatcctctggaac 232 Query: 85 cc 86 || Sbjct: 233 cc 234
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 33 cctctggttcgaccccaccgccgacttcca 62 |||||||||||||||| | ||||||||||| Sbjct: 33529 cctctggttcgaccccgctgccgacttcca 33500
>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8, complete sequence Length = 234864 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 tcactttcttcttccttccttc 506 |||||||||||||||||||||| Sbjct: 67988 tcactttcttcttccttccttc 67967
>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete sequences Length = 148564 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 atttcccatgtaagtacatttt 592 |||||||||||||||||||||| Sbjct: 114654 atttcccatgtaagtacatttt 114675
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 223 ggcgacgtcaagatcgactgga 244 |||||||||||||||||||||| Sbjct: 31660 ggcgacgtcaagatcgactgga 31681
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 25 cagttctacctctggttcgaccccaccgccgacttccacacctaca 70 |||||||| |||||||| || ||||| || || ||||||||||||| Sbjct: 34516 cagttctatctctggtttgatcccactgctgatttccacacctaca 34471
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 44.1 bits (22), Expect = 0.55 Identities = 76/94 (80%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| ||||||||||||||||||| ||||||||||||| ||| || Sbjct: 481 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 540 Query: 79 tggaaccccaagaacatcatattccaggtggacg 112 |||||||| || || |||||||| |||||||| Sbjct: 541 tggaacccacagcacgtcatattcgcggtggacg 574
>gb|AC018632.1|AC018632 Genomic Sequence For Arabidopsis thaliana Clone F3F24, Chromosome V, complete sequence Length = 151828 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 480 catcatcactttcttcttcctt 501 |||||||||||||||||||||| Sbjct: 52794 catcatcactttcttcttcctt 52815
>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 Length = 340000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 atttcccatgtaagtacatttt 592 |||||||||||||||||||||| Sbjct: 322350 atttcccatgtaagtacatttt 322371
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 44.1 bits (22), Expect = 0.55 Identities = 76/94 (80%) Strand = Plus / Plus Query: 19 gagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgtc 78 ||||| |||||| ||||||||||||||||||| ||||||||||||| ||| || Sbjct: 481 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 540 Query: 79 tggaaccccaagaacatcatattccaggtggacg 112 |||||||| || || |||||||| |||||||| Sbjct: 541 tggaacccacagcacgtcatattcgcggtggacg 574
>gb|AF130248.1|AF130248 Homo sapiens clone 10J13 chromosome 21 map 21q11.2, complete sequence Length = 137074 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 atttcccatgtaagtacatttt 592 |||||||||||||||||||||| Sbjct: 108531 atttcccatgtaagtacatttt 108552
>dbj|AP003721.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-881M11, complete sequence Length = 201460 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcctc 513 |||||| ||||||||||||||||||| Sbjct: 134594 ctttctccttccttccttccctcctc 134619
>gb|AC003689.1|AC003689 Homo sapiens Chromosome 11q12.2 PAC clone pDJ1081b4 containing human mRNA for T-cell glycoprotein CD6, complete sequence Length = 137693 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcctc 513 |||||| ||||||||||||||||||| Sbjct: 66713 ctttctccttccttccttccctcctc 66738
>gb|AC132131.4| Mus musculus BAC clone RP23-356D16 from 10, complete sequence Length = 170192 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccct 509 |||||||||||||||||||||| Sbjct: 133368 ctttcttcttccttccttccct 133347 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcc 511 |||||||| ||||||||||||||| Sbjct: 133210 ctttcttcctccttccttccctcc 133187
>gb|M19741.1|MCACPPG1 Cauliflower mosaic virus viable recombinant ORF VIII mRNA, 3' end; ORF V mRNA, complete cds; ORF IV polymerase mRNA, 3' end; and ORF V mRNA, complete cds; ORF IV polymerase mRNA, 3' end; and ORF V capsid protein mRNA, 5' end Length = 420 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 475 tgatccatcatcactttcttct 496 |||||||||||||||||||||| Sbjct: 97 tgatccatcatcactttcttct 76
>dbj|AB013078.1| Alcaligenes xylosoxidans nir gene for Nitrite Reductase (NiR), complete cds Length = 2375 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 495 cttccttccttccctcctcgtcgttg 520 |||||||||||||||||||| ||||| Sbjct: 2324 cttccttccttccctcctcgccgttg 2349
>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence Length = 167652 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 101466 ctttcttcttccttccttccttcct 101490
>gb|AC122789.8| Mus musculus chromosome 5, clone RP24-258A20, complete sequence Length = 182866 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 50702 ctttcttcttccttccttccttcct 50678
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 34 ctctggttcgaccccaccgccgacttccacacctaca 70 ||||||||||| ||||| || || ||||||||||||| Sbjct: 464 ctctggttcgatcccactgcggatttccacacctaca 500
>ref|NM_119173.2| Arabidopsis thaliana MERI5B; hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G30270 (MERI5B) mRNA, complete cds Length = 1149 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 34 ctctggttcgaccccaccgccgacttccacacctacaagatcgtctggaaccc 86 |||||||||||||| |||||| | |||||||| ||| ||| |||||||||| Sbjct: 480 ctctggttcgacccaaccgccaatttccacacttactcaatcctctggaaccc 532
>gb|AC152953.1| Mus musculus 10 BAC RP23-403E19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211343 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 74156 ctttcttcttccttccttccttcct 74180
>gb|AC161519.11| Mus musculus chromosome 18, clone RP24-83L9, complete sequence Length = 233631 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcctc 513 ||||||||||||||||||||| Sbjct: 111634 ttcttccttccttccctcctc 111614
>gb|AC116792.17| Mus musculus chromosome 6, clone RP24-304O23, complete sequence Length = 155145 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 480 catcatcactttcttcttccttccttccctcct 512 ||||||| |||||| ||||||||||||| |||| Sbjct: 42043 catcatccctttctccttccttccttccttcct 42075
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195335 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 20485 cttcttccttccttccctcct 20465
>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence Length = 191726 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 114831 ctttcttcttccttccttccttcct 114855
>gb|AY640046.1| Ixodes scapularis TROSPA gene, complete cds Length = 11320 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 tccttccttccctcctcgtcg 517 ||||||||||||||||||||| Sbjct: 7074 tccttccttccctcctcgtcg 7094
>gb|AC132281.4| Mus musculus BAC clone RP24-348L6 from chromosome 7, complete sequence Length = 181949 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 23428 ctttcttcttccttccttccttcct 23404
>gb|AC131337.16| Mus musculus chromosome 15, clone RP23-480E1, complete sequence Length = 190303 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 160409 ctttcttcttccttccttccttcct 160433
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 11170 ctttcttcttccttccttccttcct 11194 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttcc 507 |||||||||||||||||||| Sbjct: 11334 ctttcttcttccttccttcc 11353
>gb|AC164410.5| Mus musculus chromosome 5, clone RP23-6J21, complete sequence Length = 245837 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 27520 ctttcttcttccttccttccttcct 27496
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 70030 cttcttccttccttccctcct 70010 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcct 512 |||||||||||||||||||| Sbjct: 70102 ttcttccttccttccctcct 70083
>gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, complete sequence Length = 244130 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 193328 ctttcttcttccttccttccttcct 193352
>gb|AF064859.1| Homo sapiens chromosome 21q22.3 PAC 141B3, complete sequence, containing ribosomal protein homologue pseudogene L23a Length = 122571 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||| |||||||||||||||||| Sbjct: 47157 ctttctccttccttccttccctcct 47133
>gb|AF516878.1| Mus musculus ribosomal RNA intergenic spacer, partial sequence Length = 6543 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 3491 ctttcttcttccttccttccttcct 3515
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 40 ttcgaccccaccgccgacttccacaccta 68 |||||||| | |||||||||||||||||| Sbjct: 30552 ttcgacccaatcgccgacttccacaccta 30580
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 40 ttcgaccccaccgccgacttccacaccta 68 |||||||| | |||||||||||||||||| Sbjct: 65223 ttcgacccaatcgccgacttccacaccta 65195
>gb|AC139231.11| Mus musculus chromosome 1, clone RP24-87I22, complete sequence Length = 191438 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 78782 ctttcttcttccttccttccttcct 78806
>gb|AC101728.10| Mus musculus chromosome 19, clone RP23-328I5, complete sequence Length = 184577 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 146251 ctttcttcttccttccttccttcct 146227
>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete sequence Length = 188848 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 32593 ctttcttcttccttccttccttcct 32569
>gb|AC134415.8| Mus musculus chromosome 3, clone RP24-224P21, complete sequence Length = 167586 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 151691 ctttcttcttccttccttccttcct 151715
>gb|AC163297.4| Mus musculus BAC clone RP23-106G24 from chromosome 3, complete sequence Length = 194271 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 129693 ctttcttcttccttccttccttcct 129669
>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence Length = 166756 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 97594 ctttcttcttccttccttccttcct 97618
>gb|AC166816.2| Mus musculus chromosome 5, clone RP24-321O22, complete sequence Length = 156357 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 98473 ctttcttcttccttccttccttcct 98449
>gb|AC109239.8| Mus musculus chromosome 3, clone RP23-191N23, complete sequence Length = 187162 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 15100 ctttcttcttccttccttccttcct 15124
>gb|AC133896.7| Mus musculus chromosome 5, clone RP24-529E15, complete sequence Length = 187415 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 131357 ctttcttcttccttccttccttcct 131381
>gb|AC132948.3| Mus musculus BAC clone RP24-467P6 from chromosome 8, complete sequence Length = 166801 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 144394 ctttcttcttccttccttccttcct 144370
>gb|AC140339.4| Mus musculus BAC clone RP24-64N14 from chromosome 17, complete sequence Length = 229599 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 103190 ctttcttcttccttccttccttcct 103166
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence Length = 211002 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 159140 ctttcttcttccttccttccttcct 159164
>gb|AC183296.3| Pan troglodytes BAC clone CH251-352A17 from chromosome 19, complete sequence Length = 180482 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||| |||||||||||||||||| Sbjct: 147556 ctttctccttccttccttccctcct 147532
>gb|AC144945.4| Mus musculus BAC clone RP23-334D20 from chromosome 19, complete sequence Length = 233962 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 147569 ctttcttcttccttccttccttcct 147545
>gb|AC133954.3| Mus musculus BAC clone RP23-154C17 from chromosome 5, complete sequence Length = 199991 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 20535 cttcttccttccttccctcct 20515
>gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence Length = 185268 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 27403 ctttcttcttccttccttccttcct 27379
>gb|AC162613.2| Mus musculus chromosome 19, clone RP24-270E10, complete sequence Length = 147306 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 54509 ctttcttcttccttccttccttcct 54533
>gb|AC157597.4| Mus musculus BAC clone RP23-231O9 from chromosome 16, complete sequence Length = 171299 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 140462 ctttcttcttccttccttccttcct 140438
>gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosome 16, complete sequence Length = 199601 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 137972 cttcttccttccttccctcct 137952
>gb|AC164603.4| Mus musculus chromosome 8, clone RP24-114E3, complete sequence Length = 164927 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 74628 ctttcttcttccttccttccttcct 74652
>gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosome 17, complete sequence Length = 206180 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 124113 ctttcttcttccttccttccttcct 124137 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttcc 507 |||||||||||||||||||| Sbjct: 124277 ctttcttcttccttccttcc 124296
>gb|AC166990.3| Mus musculus BAC clone RP24-173K24 from chromosome 12, complete sequence Length = 144985 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 10724 ctttcttcttccttccttccttcct 10748
>gb|AC160335.6| Mus musculus BAC clone RP23-38N19 from chromosome 15, complete sequence Length = 212090 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 49929 ctttcttcttccttccttccttcct 49905
>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence Length = 214085 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 127479 ctttcttcttccttccttccttcct 127455
>gb|AC148980.6| Mus musculus BAC clone RP23-230C16 from chromosome 7, complete sequence Length = 192433 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 21620 ctttcttcttccttccttccttcct 21644
>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence Length = 193216 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 128652 ctttcttcttccttccttccttcct 128628
>gb|AC146602.3| Mus musculus BAC clone RP23-309L12 from chromosome 14, complete sequence Length = 198097 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 36000 ctttcttcttccttccttccttcct 35976
>gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, complete sequence Length = 209975 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 195639 ctttcttcttccttccttccttcct 195615
>gb|AC124721.4| Mus musculus chromosome 10 clone RP23-387G19, complete sequence Length = 216612 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcctc 513 ||||||||||||||||||||| Sbjct: 153947 ttcttccttccttccctcctc 153927
>gb|AC073221.9| Homo sapiens BAC clone RP11-543D8 from 7, complete sequence Length = 94027 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 493 ttcttccttccttccctcctc 513 ||||||||||||||||||||| Sbjct: 1760 ttcttccttccttccctcctc 1780
>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence Length = 135214 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcctc 513 ||||||||||||||||||||| Sbjct: 35009 ttcttccttccttccctcctc 34989
>gb|AC147339.2| Pan troglodytes BAC clone CH251-65E18 from Y, complete sequence Length = 178935 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcctc 513 ||||||||||||||||||||| Sbjct: 22515 ttcttccttccttccctcctc 22495
>gb|AC009152.8| Homo sapiens chromosome 16 clone RP11-567P19, complete sequence Length = 171127 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 32043 cttcttccttccttccctcct 32063
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence Length = 247655 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 91376 ctttcttcttccttccttccttcct 91352
>gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome 19, complete sequence Length = 246177 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 151583 ctttcttcttccttccttccttcct 151559
>gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosome 18, complete sequence Length = 182085 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 90260 ctttcttcttccttccttccttcct 90236
>emb|AJ512860.1|CCR512860 Crocuta crocuta microsatellite DNA, clone T01C09 Length = 333 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 146 ctttcttcttccttccttccttcct 122
>emb|CT010443.3| M.truncatula DNA sequence from clone MTH2-76G21 on chromosome 3, complete sequence Length = 111543 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 actttcttcttccttccttcc 507 ||||||||||||||||||||| Sbjct: 58848 actttcttcttccttccttcc 58828
>emb|CR381597.7| Zebrafish DNA sequence from clone CH211-182L5 in linkage group 23, complete sequence Length = 41390 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 cactttcttcttccttccttc 506 ||||||||||||||||||||| Sbjct: 28118 cactttcttcttccttccttc 28138
>gb|AC132320.4| Mus musculus BAC clone RP24-259L9 from chromosome 18, complete sequence Length = 156239 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 61186 ctttcttcttccttccttccttcct 61210
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence Length = 178757 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 57000 ctttcttcttccttccttccttcct 57024
>gb|AC122185.4| Mus musculus BAC clone RP23-18J13 from chromosome 15, complete sequence Length = 202485 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 132757 ctttcttcttccttccttccttcct 132781
>gb|AC125484.4| Mus musculus BAC clone RP23-127L14 from chromosome 13, complete sequence Length = 207318 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 489 tttcttcttccttccttccctcctc 513 ||||||||||||||||||| ||||| Sbjct: 49366 tttcttcttccttccttccttcctc 49342
>gb|AC125533.4| Mus musculus BAC clone RP23-451C1 from chromosome 5, complete sequence Length = 180892 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 133906 cttcttccttccttccctcct 133886
>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence Length = 214819 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 26992 ctttcttcttccttccttccttcct 26968
>gb|AF441733.2| Mus musculus clone RP23-225M6 45S pre-ribosomal RNA gene, partial sequence; and intergenic spacer, partial sequence Length = 31129 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 11163 ctttcttcttccttccttccttcct 11187 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 tttcttcttccttccttccctcct 512 ||||||||||||||||||| |||| Sbjct: 25468 tttcttcttccttccttccttcct 25491 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 tttcttcttccttccttccctcct 512 ||||||||||||||||||| |||| Sbjct: 18701 tttcttcttccttccttccttcct 18724
>gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosome 7, complete sequence Length = 188677 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||| |||||||||||| Sbjct: 150174 ctttcttcttccctccttccctcct 150150
>gb|AC131702.3| Mus musculus BAC clone RP24-177J5 from chromosome 7, complete sequence Length = 154632 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 6899 ctttcttcttccttccttccttcct 6875
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 180605 ctttcttcttccttccttccttcct 180629
>gb|AC122916.4| Mus musculus BAC clone RP23-28F1 from 5, complete sequence Length = 231319 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 201316 ctttcttcttccttccttccttcct 201292 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 107852 ctttcttcttccttccttccttcct 107828
>gb|AC122853.3| Mus musculus BAC clone RP23-175F18 from 7, complete sequence Length = 199264 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 10997 ctttcttcttccttccttccttcct 11021
>gb|AC129333.4| Mus musculus BAC clone RP23-104F23 from 6, complete sequence Length = 216849 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 210268 ctttcttcttccttccttccttcct 210244
>gb|AC124733.4| Mus musculus BAC clone RP23-306C18 from 12, complete sequence Length = 206837 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 36452 ctttcttcttccttccttccttcct 36428
>gb|AC108948.3| Mus musculus BAC clone RP23-183P12 from 15, complete sequence Length = 196923 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 166999 ctttcttcttccttccttccttcct 166975
>gb|AC121610.2| Mus musculus BAC clone RP23-326L12 from 10, complete sequence Length = 192060 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 80309 ctttcttcttccttccttccttcct 80285
>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence Length = 170072 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 66045 ctttcttcttccttccttccttcct 66069
>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence Length = 186217 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 106475 ctttcttcttccttccttccttcct 106451
>gb|AC117608.13| Mus musculus chromosome 14, clone RP23-100O3, complete sequence Length = 210905 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 180850 ctttcttcttccttccttccttcct 180874
>gb|AC098731.3| Mus musculus BAC clone RP23-3L10 from 9, complete sequence Length = 220184 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 7359 ctttcttcttccttccttccttcct 7335 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 7296 ctttcttcttccttccttccttcct 7272
>gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, complete sequence Length = 95280 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcctc 513 ||||||||||||||||||||| Sbjct: 39189 ttcttccttccttccctcctc 39169
>gb|AC005049.2| Homo sapiens BAC clone CTB-23I15 from 7, complete sequence Length = 106928 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 18265 ctttcttcttccttccttccttcct 18241
>gb|AC004454.1| Homo sapiens PAC clone RP5-988L12 from 7, complete sequence Length = 80514 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 37351 ctttcttcttccttccttccttcct 37375
>gb|AC111048.8| Mus musculus chromosome 19, clone RP23-355N22, complete sequence Length = 232012 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 183159 ctttcttcttccttccttccttcct 183183
>gb|AC102114.9| Mus musculus chromosome 10, clone RP23-139F20, complete sequence Length = 232173 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 56542 cttcttccttccttccctcct 56522
>gb|AC110245.10| Mus musculus chromosome 3, clone RP23-251B16, complete sequence Length = 241132 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 104293 ctttcttcttccttccttccttcct 104269
>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence Length = 126187 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 ccatcatcactttcttcttcc 499 ||||||||||||||||||||| Sbjct: 28757 ccatcatcactttcttcttcc 28777
>gb|AC146940.19| Medicago truncatula clone mth2-132l6, complete sequence Length = 125567 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 actttcttcttccttccttcc 507 ||||||||||||||||||||| Sbjct: 94034 actttcttcttccttccttcc 94054
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 Length = 340000 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 318417 ctttcttcttccttccttccttcct 318441 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcct 512 |||||||||||||||||||| Sbjct: 290494 ttcttccttccttccctcct 290475
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||| |||||||||||||||||| Sbjct: 288531 ctttctccttccttccttccctcct 288507
>gb|AC138017.15| Medicago truncatula clone mth2-6i3, complete sequence Length = 129585 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 actttcttcttccttccttcc 507 ||||||||||||||||||||| Sbjct: 31483 actttcttcttccttccttcc 31463
>emb|BX649635.3| Human DNA sequence from clone WI2-82904A1 on chromosome X, complete sequence Length = 43709 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 34671 ctttcttcttccttccttccttcct 34647 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttcc 507 |||||||||||||||||||| Sbjct: 35530 ctttcttcttccttccttcc 35549 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttcc 507 |||||||||||||||||||| Sbjct: 34758 ctttcttcttccttccttcc 34739
>emb|BX322532.2| Human DNA sequence from clone RP11-543A11 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ16613) and the 5' end of one variant of the OPN3 gene for opsin 3 (encephalopsin, panopsin), complete sequence Length = 40220 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||| |||||||| Sbjct: 26962 ctttcttcttccttccctccctcct 26986
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 121508 ctttcttcttccttccttccttcct 121532
>emb|AL590222.4| Human DNA sequence from clone RP11-159L8 on chromosome Xq13.2-21.2 Contains the gene for a putative purinergic receptor (FKSG79), complete sequence Length = 166810 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 34552 cttcttccttccttccctcct 34572
>emb|AL512631.11| Human DNA sequence from clone RP11-138I18 on chromosome 10 Contains the 5' end of the gene for a protein related to the N terminus of tre (RNTRE) (KIAA0019) and a CpG island, complete sequence Length = 142863 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 79958 ctttcttcttccttccttccttcct 79934
>emb|AL513524.8| Human DNA sequence from clone RP11-295F4 on chromosome 6 Contains a ribosomal protein L21 (RPL21) pseudogene, a trace amine receptor 3 (TAR3) pseudogene, the GPR102 gene for G protein-coupled receptor 102 (TA5, TAR5), the gene for trace amine receptor 4 (TA4), the gene for a novel trace amine receptor (putative neurotransmitter receptor, PNR), a trace amine receptor pseudogene, the G protein-coupled receptor 57 (GRP57) pseudogene, the GPR58 gene for G protein-coupled receptor 58 and the gene for trace amine receptor 1 (TA1) (Tar1), complete sequence Length = 141028 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 ttcttccttccttccctcctc 513 ||||||||||||||||||||| Sbjct: 133713 ttcttccttccttccctcctc 133693
>emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chromosome X Contains the 5' end of the CTPS2 gene for CTP synthase II, the CALB3 gene for calbindin 3 (vitamin D-dependent calcium binding protein), the SYAP1 gene for synapse associated protein 1 SAP47 homolog (Drosophila) and two CpG islands, complete sequence Length = 166336 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 66633 cttcttccttccttccctcct 66613
>emb|AL356968.41| Human DNA sequence from clone RP11-329A14 on chromosome 1 Contains the 5' end of the SPATA6 gene for spermatogenesis associated 6, an amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 2 (ALS2CR2) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and a CpG island, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 92462 cttcttccttccttccctcct 92442
>emb|AL359208.14| Human DNA sequence from clone RP11-320N6 on chromosome 13, complete sequence Length = 139649 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cttcttccttccttccctcct 512 ||||||||||||||||||||| Sbjct: 70414 cttcttccttccttccctcct 70394
>emb|AL160035.19| Human DNA sequence from clone RP11-545M8 on chromosome 13 Contains a novel pseudogene similar to HSPC123, a ribosomal protein S21 (RPS21) pseudogene and a ribosomal protein S20 (RPS20) pseudogene, complete sequence Length = 146168 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 137456 ctttcttcttccttccttccttcct 137480
>emb|AL161714.8| Human DNA sequence from clone RP11-184E24 on chromosome 13 Contains part of a novel gene, complete sequence Length = 95566 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 tttcttcttccttccttccct 509 ||||||||||||||||||||| Sbjct: 11995 tttcttcttccttccttccct 11975
>emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chromosome 9 Contains the 3' end of the PRSS3 gene for serine protease 3 (mesotrypsin) (MTG, TRY3, TRY4, PRSS4), the 5' end of a novel gene, two novel pseudogenes, a DC2 protein pseudogene, the UBC3B gene for ubiquitin-conjugating enzyme, two novel genes, the 3' end of a novel gene (KIAA1491, FLJ22435, FLJ21704, FLJ22148, FLJ33002) and a CpG island, complete sequence Length = 193280 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 ttcttcttccttccttccctc 510 ||||||||||||||||||||| Sbjct: 143268 ttcttcttccttccttccctc 143248
>gb|AC097641.6| Homo sapiens, clone RP11-143K11, complete sequence Length = 167127 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccc 508 ||||||||||||||||||||| Sbjct: 164612 ctttcttcttccttccttccc 164592
>gb|AC161813.2| Mus musculus chromosome 5, clone RP23-264M9, complete sequence Length = 154852 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 ctttcttcttccttccttccctcct 512 |||||||||||||||||||| |||| Sbjct: 123916 ctttcttcttccttccttccttcct 123892 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,118,853 Number of Sequences: 3902068 Number of extensions: 5118853 Number of successful extensions: 565379 Number of sequences better than 10.0: 970 Number of HSP's better than 10.0 without gapping: 976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 547670 Number of HSP's gapped (non-prelim): 17686 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
