Clone Name | basd2e13 |
---|---|
Clone Library Name | barley_pub |
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 32.3 bits (72), Expect = 0.37 Identities = 19/29 (65%), Positives = 19/29 (65%) Frame = +1 Query: 46 G*AGVPFFSCAAC*VRTSSXFGVGASRVR 132 G AGVPFFSCAA GVGASRVR Sbjct: 285 GEAGVPFFSCAAS-EFVELFVGVGASRVR 312
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 32.3 bits (72), Expect = 0.37 Identities = 19/29 (65%), Positives = 19/29 (65%) Frame = +1 Query: 46 G*AGVPFFSCAAC*VRTSSXFGVGASRVR 132 G AGVPFFSCAA GVGASRVR Sbjct: 317 GEAGVPFFSCAAS-EFVELFVGVGASRVR 344
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 32.3 bits (72), Expect = 0.37 Identities = 19/29 (65%), Positives = 19/29 (65%) Frame = +1 Query: 46 G*AGVPFFSCAAC*VRTSSXFGVGASRVR 132 G AGVPFFSCAA GVGASRVR Sbjct: 305 GEAGVPFFSCAAS-EFVELFVGVGASRVR 332
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 32.3 bits (72), Expect = 0.37 Identities = 19/29 (65%), Positives = 19/29 (65%) Frame = +1 Query: 46 G*AGVPFFSCAAC*VRTSSXFGVGASRVR 132 G AGVPFFSCAA GVGASRVR Sbjct: 308 GEAGVPFFSCAAS-EFVELFVGVGASRVR 335
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 30.8 bits (68), Expect = 1.1 Identities = 18/29 (62%), Positives = 18/29 (62%) Frame = +1 Query: 46 G*AGVPFFSCAAC*VRTSSXFGVGASRVR 132 G AG PFFSCAA GVGASRVR Sbjct: 308 GEAGTPFFSCAAS-EFVELFVGVGASRVR 335 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,794,571 Number of Sequences: 219361 Number of extensions: 176512 Number of successful extensions: 315 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 315 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 315 length of database: 80,573,946 effective HSP length: 20 effective length of database: 76,186,726 effective search space used: 1828481424 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)