ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baak4n16 | 514 | AV910535 | not_full | ref|NM_185886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 | 203 | not_full | SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 | 500 | -- | --- | - | -- | --- | - |
| baak4n15 | 483 | AV910534 | not_full | gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 | 134 | not_full | RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 | 124 | -- | --- | - | -- | --- | - |
| baak4n14 | 19 | AV832522 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baak4n13 | 572 | AV910533 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4n12 | 448 | AV910532 | not_full | gb|BT009335.1| Triticum aestivum clone wlm4.pk0009.a8:fis, full insert mRNA sequence Length = 1660 | 66 | not_full | RETM_DROME (Q9VMD6) Protein real-time Length = 659 | 50 | -- | --- | - | -- | --- | - |
| baak4n11 | 528 | AV910531 | not_full | emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev Length = 326 | 491 | not_full | CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP) Length = 267 | 164 | -- | --- | - | -- | --- | - |
| baak4n10 | 455 | AV910530 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4n08 | 384 | AV910529 | not_full | gb|AY111262.1| Zea mays CL57609_1 mRNA sequence Length = 862 | 36 | not_full | YC31_SCHPO (O14065) Hypothetical protein C962.01 in chromosome III Length = 1429 | 126 | -- | --- | - | -- | --- | - |
| baak4n06 | 314 | AV910528 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 123 | not_full | RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 | 153 | -- | --- | - | -- | --- | - |
| baak4n05 | 395 | AV910527 | not_full | emb|X79466.1|HVES2A H.vulgare (Dbg 567) ES2A mRNA Length = 793 | 34 | not_full | LEA1_HORVU (P14928) ABA-inducible protein PHV A1 Length = 213 | 65 | -- | --- | - | -- | --- | - |
| baak4n04 | 445 | AV910526 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4n03 | 502 | AV910525 | not_full | dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 | 396 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 165 | -- | --- | - | -- | --- | - |
| baak4n02 | 456 | AV910524 | not_full | gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3NULL end Length = 1394 | 67 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 29 | -- | --- | - | -- | --- | - |
| baak4n01 | 548 | AV910523 | not_full | dbj|AK065884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043L06, full insert sequence Length = 1223 | 29 | not_full | CBBY_RHOSH (P95649) Protein cbbY Length = 230 | 76 | -- | --- | - | -- | --- | - |
| baak4m24 | 352 | AV910522 | not_full | gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 | 11 | not_full | GPR1_YEAST (Q12361) G protein-coupled receptor GPR1 Length = 961 | 7 | -- | --- | - | -- | --- | - |
| baak4m23 | 308 | AV910521 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4m22 | 486 | AV832521 | not_full | gb|BT009063.1| Triticum aestivum clone wds1f.pk002.p21:fis, full insert mRNA sequence Length = 1378 | 49 | not_full | SSPO_BOVIN (P98167) SCO-spondin (Fragment) Length = 867 | 3 | -- | --- | - | -- | --- | - |
| baak4m21 | 444 | AV910520 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 388 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| baak4m20 | 486 | AV910519 | not_full | emb|X16000.1|HVGLN2 Hordeum vulgare mRNA for glutamine synthetase precursor (EC 6.3.1.2) Length = 1549 | 97 | not_full | GLNA2_HORVU (P13564) Glutamine synthetase leaf isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Chloroplast GS2) Length = 434 | 260 | -- | --- | - | -- | --- | - |
| baak4m19 | 516 | AV910518 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 101 | not_full | OCS1_MAIZE (P24068) Ocs element-binding factor 1 (OCSBF-1) Length = 151 | 25 | -- | --- | - | -- | --- | - |
| baak4m18 | 547 | AV910517 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4m17 | 617 | AV910516 | not_full | dbj|AK068716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163C09, full insert sequence Length = 3660 | 40 | not_full | AMP1B_ARATH (Q9FV52) Methionine aminopeptidase 1B, chloroplast precursor (EC 3.4.11.18) (MetAP 1B) (MAP 1B) (Peptidase M 1B) Length = 369 | 71 | -- | --- | - | -- | --- | - |
| baak4m16 | 547 | AV910515 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 402 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 166 | -- | --- | - | -- | --- | - |
| baak4m15 | 443 | AV910514 | not_full | ref|XM_474227.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1356 | 31 | not_full | GCH1_MYCLE (O69531) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I) Length = 205 | 128 | -- | --- | - | -- | --- | - |
| baak4m14 | 539 | AV910513 | not_full | gb|BT017789.1| Zea mays clone EL01N0504E06.c mRNA sequence Length = 1255 | 128 | not_full | KPYC_SOLTU (P22200) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) Length = 510 | 17 | -- | --- | - | -- | --- | - |
| baak4m13 | 576 | AV910512 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 107 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 259 | -- | --- | - | -- | --- | - |
| baak4m12 | 196 | AV910511 | not_full | gb|AC158968.3| Mus musculus chromosome 1, clone RP23-411D16, complete sequence Length = 183663 | 33 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baak4m10 | 606 | AV910510 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4m09 | 478 | AV910509 | not_full | ref|XM_472987.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 | 44 | not_full | PLPP_HUMAN (Q96GD0) Pyridoxal phosphate phosphatase (EC 3.1.3.74) (PLP phosphatase) Length = 296 | 35 | -- | --- | - | -- | --- | - |
| baak4m08 | 592 | AV910508 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4m07 | 452 | AV910507 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4m05 | 668 | AV910506 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4m04 | 558 | AV910505 | not_full | emb|Z34267.1|HVBKACPS2 H.vulgare (pMaW20) pseudo mRNA for beta-ketoacyl-ACP synthase (partial) Length = 1734 | 64 | not_full | KASC1_HORVU (P23902) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) Length = 462 | 58 | -- | --- | - | -- | --- | - |
| baak4m03 | 239 | AV910504 | not_full | gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2) mRNA, complete cds Length = 3907 | 53 | not_full | CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 | 20 | -- | --- | - | -- | --- | - |
| baak4m02 | 509 | AV910503 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4m01 | 529 | AV910502 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4l24 | 535 | AV910501 | not_full | gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 | 47 | not_full | HS21C_WHEAT (Q00445) Small heat shock protein, chloroplast precursor (Heat shock protein 26.6) Length = 238 | 2 | -- | --- | - | -- | --- | - |
| baak4l23 | 580 | AV910500 | not_full | gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA, complete cds Length = 1704 | 79 | not_full | CHLP_SYNY3 (Q55087) Geranylgeranyl hydrogenase Length = 407 | 23 | -- | --- | - | -- | --- | - |
| baak4l22 | 504 | AV910499 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 397 | full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| baak4l21 | 312 | AV910498 | not_full | gb|U37285.1|ZMU37285 Zea mays phytoene desaturase mRNA, complete cds Length = 2264 | 55 | not_full | CRTI_ORYSA (Q9ZTN9) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) Length = 566 | 338 | -- | --- | - | -- | --- | - |
| baak4l20 | 492 | AV910497 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4l19 | 513 | AV910496 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4l18 | 346 | AV832520 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 34 | not_full | RAB6A_MOUSE (P35279) Ras-related protein Rab-6A (Rab-6) Length = 207 | 5 | -- | --- | - | -- | --- | - |
| baak4l17 | 612 | AV910495 | not_full | ref|NM_194511.1| Oryza sativa (japonica cultivar-group) putative notchless protein homolog (OSJNBa0071K19.11), mRNA Length = 1344 | 184 | not_full | NLE1_BOVIN (Q58D20) Notchless homolog 1 Length = 485 | 500 | -- | --- | - | -- | --- | - |
| baak4l16 | 601 | AV910494 | not_full | ref|XM_475089.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1647 | 65 | not_full | HEXP_LEIMA (Q04832) DNA-binding protein HEXBP (Hexamer-binding protein) Length = 271 | 212 | -- | --- | - | -- | --- | - |
| baak4l15 | 483 | AV910493 | not_full | emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 | 492 | not_full | CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) Length = 265 | 102 | -- | --- | - | -- | --- | - |
| baak4l14 | 592 | AV910492 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 195 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 115 | -- | --- | - | -- | --- | - |
| baak4l13 | 575 | AV910491 | not_full | emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 | 136 | not_full | RUBB_SECCE (Q43831) RuBisCO large subunit-binding protein subunit beta, chloroplast (60 kDa chaperonin subunit beta) (CPN-60 beta) (Fragment) Length = 499 | 408 | -- | --- | - | -- | --- | - |
| baak4l12 | 485 | AV910490 | not_full | gb|BT017005.1| Zea mays clone EK07D2310A10.c mRNA sequence Length = 1053 | 122 | not_full | SNF7_CANGA (Q6FW96) Vacuolar sorting protein SNF7 (Vacuolar protein sorting-associated protein VPS32) Length = 228 | 73 | -- | --- | - | -- | --- | - |
| baak4l11 | 648 | AV910489 | full | gb|AY123420.1| Triticum aestivum putative 40S ribosomal protein S3 mRNA, complete cds Length = 1004 | 500 | not_full | RS31_XENLA (P02350) 40S ribosomal protein S3-A (S1A) Length = 246 | 300 | -- | --- | - | -- | --- | - |
