Clone Name | baak4m09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472987.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 601 bits (303), Expect = e-169 Identities = 417/455 (91%) Strand = Plus / Plus Query: 1 gatttccccaaagacaagaaggtttacgtgattggagaggaagggatcctcaaggagctc 60 |||||||||||||||||||||||||| |||||||||||||| ||||| || |||||||| Sbjct: 484 gatttccccaaagacaagaaggtttatgtgattggagaggacgggattctgaaggagctg 543 Query: 61 gagctggctggctttcagtacctcggcggacccacagacggtgacaagaagatagagctg 120 ||||||||||| ||||||||||||||||| || | || || |||||||||||||||||| Sbjct: 544 gagctggctggatttcagtacctcggcgggccatctgatggagacaagaagatagagctg 603 Query: 121 aagcctggcttctacatggagcatgacaaagatgttggagcagttgtagtgggatttgat 180 |||||||| || |||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 604 aagcctggattttacatggaacatgacaaagatgttggagcagttgttgtgggattcgat 663 Query: 181 cgctattttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctggg 240 ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| Sbjct: 664 cgctattttaactactacaaagtacagtacgggacactgtgcattcgtgagaatccaggg 723 Query: 241 tgccttttcattgcaacaaacagggacgctgtcacccatctcactgatgcccaggagtgg 300 |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| |||||| Sbjct: 724 tgccttttcattgccacaaaccgggacgccgtcacccatcttactgatgcccaagagtgg 783 Query: 301 gcaggtggcgggtcgatggtcggcgctgttcttggttcaaccaaacaagaaccgctcgtc 360 |||||||| ||||| ||||| || || ||||||||||||| ||||||||||||||||| Sbjct: 784 gcaggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgtt 843 Query: 361 gtcgggaagccgtcgacattcatgatggactacctggcaaagaagtttggaatcacaaca 420 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 844 gtcgggaagccgtcaacattcatgatggactacctggcaaagaagtttgggatcacaaca 903 Query: 421 tctcagatatgcatggtaggtgaccgtttggatac 455 || |||||||||||||| ||||||||||||||||| Sbjct: 904 tcccagatatgcatggttggtgaccgtttggatac 938
>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full insert sequence Length = 2822 Score = 601 bits (303), Expect = e-169 Identities = 417/455 (91%) Strand = Plus / Plus Query: 1 gatttccccaaagacaagaaggtttacgtgattggagaggaagggatcctcaaggagctc 60 |||||||||||||||||||||||||| |||||||||||||| ||||| || |||||||| Sbjct: 491 gatttccccaaagacaagaaggtttatgtgattggagaggacgggattctgaaggagctg 550 Query: 61 gagctggctggctttcagtacctcggcggacccacagacggtgacaagaagatagagctg 120 ||||||||||| ||||||||||||||||| || | || || |||||||||||||||||| Sbjct: 551 gagctggctggatttcagtacctcggcgggccatctgatggagacaagaagatagagctg 610 Query: 121 aagcctggcttctacatggagcatgacaaagatgttggagcagttgtagtgggatttgat 180 |||||||| || |||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 611 aagcctggattttacatggaacatgacaaagatgttggagcagttgttgtgggattcgat 670 Query: 181 cgctattttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctggg 240 ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| Sbjct: 671 cgctattttaactactacaaagtacagtacgggacactgtgcattcgtgagaatccaggg 730 Query: 241 tgccttttcattgcaacaaacagggacgctgtcacccatctcactgatgcccaggagtgg 300 |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| |||||| Sbjct: 731 tgccttttcattgccacaaaccgggacgccgtcacccatcttactgatgcccaagagtgg 790 Query: 301 gcaggtggcgggtcgatggtcggcgctgttcttggttcaaccaaacaagaaccgctcgtc 360 |||||||| ||||| ||||| || || ||||||||||||| ||||||||||||||||| Sbjct: 791 gcaggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgtt 850 Query: 361 gtcgggaagccgtcgacattcatgatggactacctggcaaagaagtttggaatcacaaca 420 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 851 gtcgggaagccgtcaacattcatgatggactacctggcaaagaagtttgggatcacaaca 910 Query: 421 tctcagatatgcatggtaggtgaccgtttggatac 455 || |||||||||||||| ||||||||||||||||| Sbjct: 911 tcccagatatgcatggttggtgaccgtttggatac 945
>dbj|AK066522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072G15, full insert sequence Length = 1373 Score = 601 bits (303), Expect = e-169 Identities = 417/455 (91%) Strand = Plus / Plus Query: 1 gatttccccaaagacaagaaggtttacgtgattggagaggaagggatcctcaaggagctc 60 |||||||||||||||||||||||||| |||||||||||||| ||||| || |||||||| Sbjct: 567 gatttccccaaagacaagaaggtttatgtgattggagaggacgggattctgaaggagctg 626 Query: 61 gagctggctggctttcagtacctcggcggacccacagacggtgacaagaagatagagctg 120 ||||||||||| ||||||||||||||||| || | || || |||||||||||||||||| Sbjct: 627 gagctggctggatttcagtacctcggcgggccatctgatggagacaagaagatagagctg 686 Query: 121 aagcctggcttctacatggagcatgacaaagatgttggagcagttgtagtgggatttgat 180 |||||||| || |||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 687 aagcctggattttacatggaacatgacaaagatgttggagcagttgttgtgggattcgat 746 Query: 181 cgctattttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctggg 240 ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| Sbjct: 747 cgctattttaactactacaaagtacagtacgggacactgtgcattcgtgagaatccaggg 806 Query: 241 tgccttttcattgcaacaaacagggacgctgtcacccatctcactgatgcccaggagtgg 300 |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| |||||| Sbjct: 807 tgccttttcattgccacaaaccgggacgccgtcacccatcttactgatgcccaagagtgg 866 Query: 301 gcaggtggcgggtcgatggtcggcgctgttcttggttcaaccaaacaagaaccgctcgtc 360 |||||||| ||||| ||||| || || ||||||||||||| ||||||||||||||||| Sbjct: 867 gcaggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgtt 926 Query: 361 gtcgggaagccgtcgacattcatgatggactacctggcaaagaagtttggaatcacaaca 420 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 927 gtcgggaagccgtcaacattcatgatggactacctggcaaagaagtttgggatcacaaca 986 Query: 421 tctcagatatgcatggtaggtgaccgtttggatac 455 || |||||||||||||| ||||||||||||||||| Sbjct: 987 tcccagatatgcatggttggtgaccgtttggatac 1021
>dbj|AK104854.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B10, full insert sequence Length = 1353 Score = 593 bits (299), Expect = e-166 Identities = 416/455 (91%) Strand = Plus / Plus Query: 1 gatttccccaaagacaagaaggtttacgtgattggagaggaagggatcctcaaggagctc 60 |||||||||||||||||||||||||| |||||||||||||| ||||| || |||||||| Sbjct: 567 gatttccccaaagacaagaaggtttatgtgattggagaggacgggattctgaaggagctg 626 Query: 61 gagctggctggctttcagtacctcggcggacccacagacggtgacaagaagatagagctg 120 ||||||||||| ||||||||||||||||| || | || || |||||||||||||||||| Sbjct: 627 gagctggctggatttcagtacctcggcgggccatctgatggagacaagaagatagagctg 686 Query: 121 aagcctggcttctacatggagcatgacaaagatgttggagcagttgtagtgggatttgat 180 |||||||| || |||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 687 aagcctggattttacatggaacatgacaaagatgttggagcagttgttgtgggattcgat 746 Query: 181 cgctattttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctggg 240 ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| Sbjct: 747 cgctattttaactactacaaagtacagtacgggacactgtgcattcgtgagaatccaggg 806 Query: 241 tgccttttcattgcaacaaacagggacgctgtcacccatctcactgatgcccaggagtgg 300 |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| |||||| Sbjct: 807 tgccttttcattgccacaaaccgggacgccgtcacccatcttactgatgcccaagagtgg 866 Query: 301 gcaggtggcgggtcgatggtcggcgctgttcttggttcaaccaaacaagaaccgctcgtc 360 |||||||| ||||| ||||| || || ||||||||||||| ||||||||||||||||| Sbjct: 867 gcaggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgtt 926 Query: 361 gtcgggaagccgtcgacattcatgatggactacctggcaaagaagtttggaatcacaaca 420 |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 927 gtcgggaagccgtcaacattcatgatggactacctagcaaagaagtttgggatcacaaca 986 Query: 421 tctcagatatgcatggtaggtgaccgtttggatac 455 || |||||||||||||| ||||||||||||||||| Sbjct: 987 tcccagatatgcatggttggtgaccgtttggatac 1021
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 302 caggtggcgggtcgatggtcggcgctgttcttggttcaaccaaacaagaaccgctcgtcg 361 ||||||| ||||| ||||| || || ||||||||||||| ||||||||||||||||| | Sbjct: 63561 caggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgttg 63502 Query: 362 tcgggaagccgtcgacattcatgatggactacctggcaaagaagt 406 ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 63501 tcgggaagccgtcaacattcatgatggactacctggcaaagaagt 63457 Score = 135 bits (68), Expect = 1e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 207 gtacgggacactctgcatacgtgagaatcctgggtgccttttcattgcaacaaacaggga 266 |||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||| |||| Sbjct: 63737 gtacgggacactgtgcattcgtgagaatccagggtgccttttcattgccacaaaccggga 63678 Query: 267 cgctgtcacccatctcactgatgcccaggagtgggcaggt 306 ||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 63677 cgccgtcacccatcttactgatgcccaagagtgggcaggt 63638 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 20 aggtttacgtgattggagaggaagggatcctcaaggagctcgagctggctggctttcagt 79 ||||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 64372 aggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagt 64313 Query: 80 acctcggcgg 89 |||||||||| Sbjct: 64312 acctcggcgg 64303 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 154 gttggagcagttgtagtgggatttgatcgctattttaactactacaaagttcagta 209 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 64086 gttggagcagttgttgtgggattcgatcgctattttaactactacaaagtacagta 64031 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 103 gacaagaagatagagctgaagcctggcttctacatggagcatgacaaagatgt 155 |||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 64210 gacaagaagatagagctgaagcctggattttacatggaacatgacaaagatgt 64158 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 405 gtttggaatcacaacatctcagatatgcatggtaggtgaccgtttggatac 455 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 63346 gtttgggatcacaacatcccagatatgcatggttggtgaccgtttggatac 63296 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gatttccccaaagacaagaaggt 23 ||||||||||||||||||||||| Sbjct: 64533 gatttccccaaagacaagaaggt 64511
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 302 caggtggcgggtcgatggtcggcgctgttcttggttcaaccaaacaagaaccgctcgtcg 361 ||||||| ||||| ||||| || || ||||||||||||| ||||||||||||||||| | Sbjct: 24503930 caggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgttg 24503871 Query: 362 tcgggaagccgtcgacattcatgatggactacctggcaaagaagt 406 ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 24503870 tcgggaagccgtcaacattcatgatggactacctggcaaagaagt 24503826 Score = 135 bits (68), Expect = 1e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 207 gtacgggacactctgcatacgtgagaatcctgggtgccttttcattgcaacaaacaggga 266 |||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||| |||| Sbjct: 24504106 gtacgggacactgtgcattcgtgagaatccagggtgccttttcattgccacaaaccggga 24504047 Query: 267 cgctgtcacccatctcactgatgcccaggagtgggcaggt 306 ||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 24504046 cgccgtcacccatcttactgatgcccaagagtgggcaggt 24504007 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 20 aggtttacgtgattggagaggaagggatcctcaaggagctcgagctggctggctttcagt 79 ||||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 24504741 aggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagt 24504682 Query: 80 acctcggcgg 89 |||||||||| Sbjct: 24504681 acctcggcgg 24504672 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 154 gttggagcagttgtagtgggatttgatcgctattttaactactacaaagttcagta 209 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 24504455 gttggagcagttgttgtgggattcgatcgctattttaactactacaaagtacagta 24504400 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 103 gacaagaagatagagctgaagcctggcttctacatggagcatgacaaagatgt 155 |||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 24504579 gacaagaagatagagctgaagcctggattttacatggaacatgacaaagatgt 24504527 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 405 gtttggaatcacaacatctcagatatgcatggtaggtgaccgtttggatac 455 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 24503715 gtttgggatcacaacatcccagatatgcatggttggtgaccgtttggatac 24503665 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gatttccccaaagacaagaaggt 23 ||||||||||||||||||||||| Sbjct: 24504902 gatttccccaaagacaagaaggt 24504880
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 302 caggtggcgggtcgatggtcggcgctgttcttggttcaaccaaacaagaaccgctcgtcg 361 ||||||| ||||| ||||| || || ||||||||||||| ||||||||||||||||| | Sbjct: 97252 caggtggagggtcaatggttggtgcaattcttggttcaactaaacaagaaccgctcgttg 97193 Query: 362 tcgggaagccgtcgacattcatgatggactacctggcaaagaagt 406 ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 97192 tcgggaagccgtcaacattcatgatggactacctggcaaagaagt 97148 Score = 135 bits (68), Expect = 1e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 207 gtacgggacactctgcatacgtgagaatcctgggtgccttttcattgcaacaaacaggga 266 |||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||| |||| Sbjct: 97428 gtacgggacactgtgcattcgtgagaatccagggtgccttttcattgccacaaaccggga 97369 Query: 267 cgctgtcacccatctcactgatgcccaggagtgggcaggt 306 ||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 97368 cgccgtcacccatcttactgatgcccaagagtgggcaggt 97329 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 20 aggtttacgtgattggagaggaagggatcctcaaggagctcgagctggctggctttcagt 79 ||||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 98063 aggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagt 98004 Query: 80 acctcggcgg 89 |||||||||| Sbjct: 98003 acctcggcgg 97994 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 154 gttggagcagttgtagtgggatttgatcgctattttaactactacaaagttcagta 209 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 97777 gttggagcagttgttgtgggattcgatcgctattttaactactacaaagtacagta 97722 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 103 gacaagaagatagagctgaagcctggcttctacatggagcatgacaaagatgt 155 |||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 97901 gacaagaagatagagctgaagcctggattttacatggaacatgacaaagatgt 97849 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 405 gtttggaatcacaacatctcagatatgcatggtaggtgaccgtttggatac 455 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 97037 gtttgggatcacaacatcccagatatgcatggttggtgaccgtttggatac 96987 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gatttccccaaagacaagaaggt 23 ||||||||||||||||||||||| Sbjct: 98224 gatttccccaaagacaagaaggt 98202
>ref|NM_123027.2| Arabidopsis thaliana catalytic/ hydrolase/ phosphoglycolate phosphatase/ phosphoric monoester hydrolase AT5G36700 mRNA, complete cds Length = 1413 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 136 atggagcatgacaaagatgttggagcagttgtagtgggatttgatcgctattttaactac 195 ||||||||||| | ||||||||||| ||||| || ||||||||||||||||| |||||| Sbjct: 643 atggagcatgatcatgatgttggagctgttgtggttggatttgatcgctatttcaactac 702 Query: 196 tacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttttcattgca 255 |||||| ||||||| || |||||||| || ||||| || || ||||| |||||||| || Sbjct: 703 tacaaaattcagtatggaacactctgtatccgtgaaaacccggggtgtcttttcatcgct 762 Query: 256 acaaacagggacgctgtcacccatctcactgatgcccaggagtgggcaggtgg 308 |||||| | || |||||||| || || |||||||| || || ||||||||||| Sbjct: 763 acaaaccgagatgctgtcactcaccttactgatgctcaagaatgggcaggtgg 815
>ref|NM_123037.2| Arabidopsis thaliana catalytic/ hydrolase/ phosphoglycolate phosphatase/ phosphoric monoester hydrolase AT5G36790 mRNA, complete cds Length = 1371 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 136 atggagcatgacaaagatgttggagcagttgtagtgggatttgatcgctattttaactac 195 ||||||||||| | ||||||||||| ||||| || ||||||||||||||||| |||||| Sbjct: 643 atggagcatgatcatgatgttggagctgttgtggttggatttgatcgctatttcaactac 702 Query: 196 tacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttttcattgca 255 |||||| ||||||| || |||||||| || ||||| || || ||||| |||||||| || Sbjct: 703 tacaaaattcagtatggaacactctgtatccgtgaaaacccggggtgtcttttcatcgct 762 Query: 256 acaaacagggacgctgtcacccatctcactgatgcccaggagtgggcaggtgg 308 |||||| | || |||||||| || || |||||||| || || ||||||||||| Sbjct: 763 acaaaccgagatgctgtcactcaccttactgatgctcaagaatgggcaggtgg 815
>gb|AY122899.1| Arabidopsis thaliana AT5g36790/f5h8_20 mRNA, complete cds Length = 1089 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 136 atggagcatgacaaagatgttggagcagttgtagtgggatttgatcgctattttaactac 195 ||||||||||| | ||||||||||| ||||| || ||||||||||||||||| |||||| Sbjct: 610 atggagcatgatcatgatgttggagctgttgtggttggatttgatcgctatttcaactac 669 Query: 196 tacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttttcattgca 255 |||||| ||||||| || |||||||| || ||||| || || ||||| |||||||| || Sbjct: 670 tacaaaattcagtatggaacactctgtatccgtgaaaacccggggtgtcttttcatcgct 729 Query: 256 acaaacagggacgctgtcacccatctcactgatgcccaggagtgggcaggtgg 308 |||||| | || |||||||| || || |||||||| || || ||||||||||| Sbjct: 730 acaaaccgagatgctgtcactcaccttactgatgctcaagaatgggcaggtgg 782
>gb|AY094446.1| Arabidopsis thaliana AT5g36790/f5h8_20 mRNA, complete cds Length = 1372 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 136 atggagcatgacaaagatgttggagcagttgtagtgggatttgatcgctattttaactac 195 ||||||||||| | ||||||||||| ||||| || ||||||||||||||||| |||||| Sbjct: 644 atggagcatgatcatgatgttggagctgttgtggttggatttgatcgctatttcaactac 703 Query: 196 tacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttttcattgca 255 |||||| ||||||| || |||||||| || ||||| || || ||||| |||||||| || Sbjct: 704 tacaaaattcagtatggaacactctgtatccgtgaaaacccggggtgtcttttcatcgct 763 Query: 256 acaaacagggacgctgtcacccatctcactgatgcccaggagtgggcaggtgg 308 |||||| | || |||||||| || || |||||||| || || ||||||||||| Sbjct: 764 acaaaccgagatgctgtcactcaccttactgatgctcaagaatgggcaggtgg 816
>dbj|AK117908.1| Arabidopsis thaliana At5g36790 mRNA for putative p-nitrophenylphosphatase, complete cds, clone: RAFL19-09-D04 Length = 1193 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 136 atggagcatgacaaagatgttggagcagttgtagtgggatttgatcgctattttaactac 195 ||||||||||| | ||||||||||| ||||| || ||||||||||||||||| |||||| Sbjct: 569 atggagcatgatcatgatgttggagctgttgtggttggatttgatcgctatttcaactac 628 Query: 196 tacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttttcattgca 255 |||||| ||||||| || |||||||| || ||||| || || ||||| |||||||| || Sbjct: 629 tacaaaattcagtatggaacactctgtatccgtgaaaacccggggtgtcttttcatcgct 688 Query: 256 acaaacagggacgctgtcacccatctcactgatgcccaggagtgggcaggtgg 308 |||||| | || |||||||| || || |||||||| || || ||||||||||| Sbjct: 689 acaaaccgagatgctgtcactcaccttactgatgctcaagaatgggcaggtgg 741
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 103 gacaagaagatagagctgaagcctggcttctacatggagcatgacaaagatgt 155 |||||||||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 13140011 gacaagaagatagaactgaagcctggattttacatggagcatgacaaagatgt 13139959 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 20 aggtttacgtgattggagaggaagggatcctcaaggagctcgagctggctggctttcagt 79 ||||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 13140173 aggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagt 13140114 Query: 80 acctcggcgg 89 | || ||||| Sbjct: 13140113 atcttggcgg 13140104 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gatttccccaaagacaagaaggt 23 ||||||||||||||||||||||| Sbjct: 13140336 gatttccccaaagacaagaaggt 13140314
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 103 gacaagaagatagagctgaagcctggcttctacatggagcatgacaaagatgt 155 |||||||||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 13094285 gacaagaagatagaactgaagcctggattttacatggagcatgacaaagatgt 13094233 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 20 aggtttacgtgattggagaggaagggatcctcaaggagctcgagctggctggctttcagt 79 ||||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 13094447 aggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagt 13094388 Query: 80 acctcggcgg 89 | || ||||| Sbjct: 13094387 atcttggcgg 13094378 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gatttccccaaagacaagaaggt 23 ||||||||||||||||||||||| Sbjct: 13094610 gatttccccaaagacaagaaggt 13094588
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 103 gacaagaagatagagctgaagcctggcttctacatggagcatgacaaagatgt 155 |||||||||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 190732 gacaagaagatagaactgaagcctggattttacatggagcatgacaaagatgt 190784 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 20 aggtttacgtgattggagaggaagggatcctcaaggagctcgagctggctggctttcagt 79 ||||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 190570 aggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagt 190629 Query: 80 acctcggcgg 89 | || ||||| Sbjct: 190630 atcttggcgg 190639 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 gatttccccaaagacaagaaggt 23 ||||||||||||||||||||||| Sbjct: 190407 gatttccccaaagacaagaaggt 190429
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178827 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 103 gacaagaagatagagctgaagcctggcttctacatggagcatgacaaagatgt 155 |||||||||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 129214 gacaagaagatagaactgaagcctggattttacatggagcatgacaaagatgt 129162 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 20 aggtttacgtgattggagaggaagggatcctcaaggagctcgagctggctggctttcagt 79 ||||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct: 129376 aggtttatgtgattggagaggacgggattctgaaggagctggagctggctggatttcagt 129317 Query: 80 acctcggcgg 89 | || ||||| Sbjct: 129316 atcttggcgg 129307 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gatttccccaaagacaagaaggt 23 ||||||||||||||||||||||| Sbjct: 129539 gatttccccaaagacaagaaggt 129517
>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence Length = 113361 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 154 gttggagcagttgtagtgggatttgatcgctattttaactactacaaagttcagta 209 |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 15783 gttggagcagttgttgtgggatttgatcgctatttcaactactataaagtccagta 15728 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 223 atacgtgagaatcctgggtgccttttcattgcaacaaacagggacgctgtcacccatctc 282 |||||||| || ||||| || ||||||||||| |||||||| || ||||| || |||||| Sbjct: 15312 atacgtgaaaaccctggatgtcttttcattgctacaaacagagatgctgttactcatctc 15253 Query: 283 actgatgcccaggagtgggcaggt 306 || || || || || ||||||||| Sbjct: 15252 acagacgctcaagaatgggcaggt 15229
>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence Length = 82723 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 154 gttggagcagttgtagtgggatttgatcgctattttaactactacaaagttcagta 209 |||||||||||||| || |||||||||||||| || |||||||| ||||||||||| Sbjct: 11116 gttggagcagttgtggttggatttgatcgctacttcaactactataaagttcagta 11061 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 214 acactctgcatacgtgagaatcctgggtgccttttcattgcaacaaacagggacgctgtc 273 ||||| || |||||||| || |||||||| |||||||||||||||| | || ||||| Sbjct: 10527 acactttgtatacgtgaaaaccctgggtgtattttcattgcaacaaatcgtgatgctgta 10468 Query: 274 acccatctcactgatgcccaggagtgggcaggt 306 || ||||| |||||||| || || ||||||||| Sbjct: 10467 actcatctgactgatgctcaagaatgggcaggt 10435 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 420 atctcagatatgcatggtaggtgaccgtttggatactgacgttctatttgggcaaaatg 478 |||||| |||||||||||||| || || |||||||| || | |||||||||||||||| Sbjct: 8506 atctcaaatatgcatggtaggagatcggttggataccgatatactatttgggcaaaatg 8448
>dbj|AP002029.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F24C7 Length = 73663 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 154 gttggagcagttgtagtgggatttgatcgctattttaactactacaaagttcagta 209 |||||||| ||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct: 43319 gttggagctgttgtggttggatttgatcgctatttcaactactacaaaattcagta 43264
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8 Length = 70098 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 154 gttggagcagttgtagtgggatttgatcgctattttaactactacaaagttcagta 209 |||||||| ||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct: 12058 gttggagctgttgtggttggatttgatcgctatttcaactactacaaaattcagta 12003
>ref|NM_124150.2| Arabidopsis thaliana ATPK5; phosphoglycolate phosphatase AT5G47760 (ATPK5) mRNA, complete cds Length = 1155 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 188 ttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttt 247 |||||||||| || ||||||||||||| ||||| |||| |||||||| || || || | Sbjct: 497 ttaactactataagcttcagtacgggactctctgtgtacgcgagaatccgggatgtctct 556 Query: 248 tcattgc 254 ||||||| Sbjct: 557 tcattgc 563
>emb|BX826485.1|CNS0A467 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 188 ttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttt 247 |||||||||| || ||||||||||||| ||||| |||| |||||||| || || || | Sbjct: 491 ttaactactataagcttcagtacgggactctctgtgtacgcgagaatccgggatgtctct 550 Query: 248 tcattgc 254 ||||||| Sbjct: 551 tcattgc 557
>gb|BT005294.1| Arabidopsis thaliana At5g47760 mRNA, complete cds Length = 906 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 188 ttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttt 247 |||||||||| || ||||||||||||| ||||| |||| |||||||| || || || | Sbjct: 482 ttaactactataagcttcagtacgggactctctgtgtacgcgagaatccgggatgtctct 541 Query: 248 tcattgc 254 ||||||| Sbjct: 542 tcattgc 548
>gb|AY087611.1| Arabidopsis thaliana clone 37055 mRNA, complete sequence Length = 1152 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 188 ttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttt 247 |||||||||| || ||||||||||||| ||||| |||| |||||||| || || || | Sbjct: 495 ttaactactataagcttcagtacgggactctctgtgtacgcgagaatccgggatgtctct 554 Query: 248 tcattgc 254 ||||||| Sbjct: 555 tcattgc 561
>dbj|AK118640.1| Arabidopsis thaliana At5g47760 mRNA for putative 4-nitrophenylphosphatase, complete cds, clone: RAFL19-90-G08 Length = 1095 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 188 ttaactactacaaagttcagtacgggacactctgcatacgtgagaatcctgggtgccttt 247 |||||||||| || ||||||||||||| ||||| |||| |||||||| || || || | Sbjct: 497 ttaactactataagcttcagtacgggactctctgtgtacgcgagaatccgggatgtctct 556 Query: 248 tcattgc 254 ||||||| Sbjct: 557 tcattgc 563
>gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, complete sequence Length = 242383 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 agtttggaatcacaacatctc 424 ||||||||||||||||||||| Sbjct: 43851 agtttggaatcacaacatctc 43831
>gb|AC164418.10| Mus musculus chromosome 1, clone RP23-431J24, complete sequence Length = 189965 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 gcaaagaagtttggaatcac 416 |||||||||||||||||||| Sbjct: 103732 gcaaagaagtttggaatcac 103751
>gb|AC119842.9| Mus musculus chromosome 1, clone RP23-277F23, complete sequence Length = 175179 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 gcaaagaagtttggaatcac 416 |||||||||||||||||||| Sbjct: 143868 gcaaagaagtttggaatcac 143887
>gb|BC033758.1| Homo sapiens centaurin, alpha 2, mRNA (cDNA clone MGC:45054 IMAGE:5214358), complete cds Length = 1961 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1559 tgggtgccttttcattgcaa 1540
>gb|AC117262.2| Mus musculus BAC clone RP24-537M7 from 2, complete sequence Length = 156547 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 agggacgctgtcacccatctcact 285 ||||||||||||| |||||||||| Sbjct: 32019 agggacgctgtcatccatctcact 32042
>ref|NM_018404.2| Homo sapiens centaurin, alpha 2 (CENTA2), mRNA Length = 2757 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1746 tgggtgccttttcattgcaa 1727
>emb|AL670471.4| Human DNA sequence from clone RP11-290H1 on chromosome 1 Contains the 5' end of a novel gene, complete sequence Length = 57408 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tccccaaagacaagaaggtt 24 |||||||||||||||||||| Sbjct: 19707 tccccaaagacaagaaggtt 19688
>gb|AC004666.9| Homo sapiens chromosome 17, clone CTC-468F23, complete sequence Length = 75120 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 53882 tgggtgccttttcattgcaa 53863
>gb|AC138207.3| Homo sapiens chromosome 17, clone RP11-848P1, complete sequence Length = 212934 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 162198 tgggtgccttttcattgcaa 162217
>dbj|AK222526.1| Homo sapiens mRNA for centaurin-alpha 2 protein variant, clone: adSE01821 Length = 1616 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1574 tgggtgccttttcattgcaa 1555
>gb|AC020571.9| Homo sapiens BAC clone RP11-387H5 from 2, complete sequence Length = 165106 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aagatgttggagcagttgta 168 |||||||||||||||||||| Sbjct: 131309 aagatgttggagcagttgta 131290
>gb|AC010285.4|AC010285 Homo sapiens chromosome 5 clone CTC-563A5, complete sequence Length = 124289 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 attttaactactacaaagtt 204 |||||||||||||||||||| Sbjct: 75393 attttaactactacaaagtt 75412
>emb|BX284649.14| Mouse DNA sequence from clone RP23-42M7 on chromosome 2, complete sequence Length = 127220 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 agggacgctgtcacccatctcact 285 ||||||||||||| |||||||||| Sbjct: 59437 agggacgctgtcatccatctcact 59414
>dbj|AK074204.1| Homo sapiens cDNA FLJ23624 fis, clone ADSE01821, highly similar to Homo sapiens mRNA for centaurin-alpha 2 protein Length = 1616 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1574 tgggtgccttttcattgcaa 1555
>dbj|AK074196.1| Homo sapiens cDNA FLJ23616 fis, clone ADKA03301, highly similar to Homo sapiens mRNA for centaurin-alpha 2 protein Length = 2277 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1723 tgggtgccttttcattgcaa 1704
>emb|AJ242782.1|HSA242782 Homo sapiens mRNA for centaurin beta Length = 1785 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1760 tgggtgccttttcattgcaa 1741
>emb|AJ238994.1|HSA238994 Homo sapiens mRNA for Centaurin-alpha2 protein Length = 1796 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1755 tgggtgccttttcattgcaa 1736
>emb|AJ272195.1|HSA272195 Homo sapiens mRNA for centaurin-alpha 2 protein Length = 2578 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1567 tgggtgccttttcattgcaa 1548
>gb|DQ288859.1| Homo sapiens clone MPMGp800L02521 centaurin alpha 2 (CENTA2) mRNA, complete cds, alternatively spliced Length = 1598 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tgggtgccttttcattgcaa 256 |||||||||||||||||||| Sbjct: 1568 tgggtgccttttcattgcaa 1549 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,969,627 Number of Sequences: 3902068 Number of extensions: 3969627 Number of successful extensions: 79740 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79550 Number of HSP's gapped (non-prelim): 190 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)