>gb|AY111262.1| Zea mays CL57609_1 mRNA sequence
          Length = 862

 Score =  145 bits (73), Expect = 1e-31
 Identities = 161/192 (83%)
 Strand = Plus / Minus

                                                                       
Query: 179 atggagcgcctgcttgggctgctcaaggtgaaggtggtgcgcgggttgaacctggccatc 238
           |||||| ||||||| |||||||||||||| | | ||||||| ||  || |||||||||||
Sbjct: 706 atggagtgcctgctggggctgctcaaggttaggttggtgcgaggagtgcacctggccatc 647

                                                                       
Query: 239 tgcgaccccctctcccacagcagcgacccctacgtcgtcatccgcctcggacagcagaaa 298
           |||||     || |||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 646 tgcgannnnntcacccacagcagcgacccctacgtcgtcctccgccacggacagcagaaa 587

                                                                       
Query: 299 gtaaagtccagcatcaaatataaaaccatcaacccagaatggaacgaggagctcaccttg 358
           || ||||| || || |||||    || ||||| || |||||||||||||| |||||| ||
Sbjct: 586 gtcaagtcaagtataaaataccgcacgatcaatccggaatggaacgaggaactcaccctg 527

                       
Query: 359 tctatcacaaac 370
           || |||||||||
Sbjct: 526 tccatcacaaac 515

>ref|XM_478258.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 965

 Score =  127 bits (64), Expect = 3e-26
 Identities = 124/144 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 aacctggccatctgcgaccccctctcccacagcagcgacccctacgtcgtcatccgcctc 286
           |||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |
Sbjct: 248 aacctggccatctgcgacccgctcacccacagcagcgacccctacgtcgtcctccgccac 307

                                                                       
Query: 287 ggacagcagaaagtaaagtccagcatcaaatataaaaccatcaacccagaatggaacgag 346
           ||    |||||||| ||||| || || | |||| |  |||||||||||||||||||||||
Sbjct: 308 ggctcccagaaagtcaagtcaagtataagatatcattccatcaacccagaatggaacgag 367

                                   
Query: 347 gagctcaccttgtctatcacaaac 370
           || ||||| || || |||||||||
Sbjct: 368 gaactcacgttatcaatcacaaac 391

>dbj|AK070911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068D10, full
           insert sequence
          Length = 963

 Score =  127 bits (64), Expect = 3e-26
 Identities = 124/144 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 aacctggccatctgcgaccccctctcccacagcagcgacccctacgtcgtcatccgcctc 286
           |||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |
Sbjct: 248 aacctggccatctgcgacccgctcacccacagcagcgacccctacgtcgtcctccgccac 307

                                                                       
Query: 287 ggacagcagaaagtaaagtccagcatcaaatataaaaccatcaacccagaatggaacgag 346
           ||    |||||||| ||||| || || | |||| |  |||||||||||||||||||||||
Sbjct: 308 ggctcccagaaagtcaagtcaagtataagatatcattccatcaacccagaatggaacgag 367

                                   
Query: 347 gagctcaccttgtctatcacaaac 370
           || ||||| || || |||||||||
Sbjct: 368 gaactcacgttatcaatcacaaac 391

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                          
Query: 227      aacctggccatctgcgaccccctctcccacagcagcgacccctacgtcgtcatccgcc 284
                |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 18858454 aacctggccatctgcgacccgctcacccacagcagcgacccctacgtcgtcctccgcc 18858511



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 324      ccatcaacccagaatggaacgaggagctcaccttgtctatcacaaac 370
                ||||||||||||||||||||||||| ||||| || || |||||||||
Sbjct: 18859888 ccatcaacccagaatggaacgaggaactcacgttatcaatcacaaac 18859934



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 241      cgaccccctctcccacagcagcgacccctacgtcgtc 277
                |||||| ||| |||||| |||||||||||||||||||
Sbjct: 18786815 cgacccgctcacccacaccagcgacccctacgtcgtc 18786851

>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_F06
          Length = 104419

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                       
Query: 227   aacctggccatctgcgaccccctctcccacagcagcgacccctacgtcgtcatccgcc 284
             |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 58640 aacctggccatctgcgacccgctcacccacagcagcgacccctacgtcgtcctccgcc 58697



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 324   ccatcaacccagaatggaacgaggagctcaccttgtctatcacaaac 370
             ||||||||||||||||||||||||| ||||| || || |||||||||
Sbjct: 60074 ccatcaacccagaatggaacgaggaactcacgttatcaatcacaaac 60120

>emb|Y10787.1|SSY10787 S.stapfianus pSD.34 mRNA
          Length = 818

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 227 aacctggccatctgcgaccccctctcccacagcagcgacccctacgtcgtc 277
           |||||||||||||||||||| ||| | |||| |||||||||||||||||||
Sbjct: 119 aacctggccatctgcgacccgctcacgcacaccagcgacccctacgtcgtc 169

>ref|XM_450293.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 957

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 259 cagcgacccctacgtcgtcatccgcctcg 287
           ||||||||||||||||||| |||||||||
Sbjct: 278 cagcgacccctacgtcgtcgtccgcctcg 306

>ref|XM_506640.1| PREDICTED Oryza sativa (japonica cultivar-group), B1080A02.31 mRNA
          Length = 1001

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 259 cagcgacccctacgtcgtcatccgcctcg 287
           ||||||||||||||||||| |||||||||
Sbjct: 293 cagcgacccctacgtcgtcgtccgcctcg 321

>ref|XM_478243.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 854

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 241 cgaccccctctcccacagcagcgacccctacgtcgtc 277
           |||||| ||| |||||| |||||||||||||||||||
Sbjct: 142 cgacccgctcacccacaccagcgacccctacgtcgtc 178

>dbj|AK061939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D08, full
           insert sequence
          Length = 854

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 241 cgaccccctctcccacagcagcgacccctacgtcgtc 277
           |||||| ||| |||||| |||||||||||||||||||
Sbjct: 142 cgacccgctcacccacaccagcgacccctacgtcgtc 178

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 259     cagcgacccctacgtcgtcatccgcctcg 287
               ||||||||||||||||||| |||||||||
Sbjct: 3895963 cagcgacccctacgtcgtcgtccgcctcg 3895991

>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1080A02
          Length = 151360

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 259    cagcgacccctacgtcgtcatccgcctcg 287
              ||||||||||||||||||| |||||||||
Sbjct: 135479 cagcgacccctacgtcgtcgtccgcctcg 135507

>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0574F11
          Length = 159891

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 259   cagcgacccctacgtcgtcatccgcctcg 287
             ||||||||||||||||||| |||||||||
Sbjct: 27475 cagcgacccctacgtcgtcgtccgcctcg 27503

>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0055I24
          Length = 155872

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 241    cgaccccctctcccacagcagcgacccctacgtcgtc 277
              |||||| ||| |||||| |||||||||||||||||||
Sbjct: 119103 cgacccgctcacccacaccagcgacccctacgtcgtc 119139

>dbj|AK120268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I20, full
           insert sequence
          Length = 953

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 241 cgaccccctctcccacagcagcgacccctacgtcgtc 277
           |||||| ||| |||||| |||||||||||||||||||
Sbjct: 145 cgacccgctcacccacaccagcgacccctacgtcgtc 181

>dbj|AK104010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-C07, full
           insert sequence
          Length = 957

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 259 cagcgacccctacgtcgtcatccgcctcg 287
           ||||||||||||||||||| |||||||||
Sbjct: 278 cagcgacccctacgtcgtcgtccgcctcg 306

>dbj|AK061218.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E07, full
           insert sequence
          Length = 1001

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 259 cagcgacccctacgtcgtcatccgcctcg 287
           ||||||||||||||||||| |||||||||
Sbjct: 293 cagcgacccctacgtcgtcgtccgcctcg 321

>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 306     ccagcatcaaatataaaacca 326
               |||||||||||||||||||||
Sbjct: 2090222 ccagcatcaaatataaaacca 2090242

>ref|XM_469622.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2244

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 ccagcatcaaatataaaaccatca 329
           ||||||||| ||||||||||||||
Sbjct: 419 ccagcatcatatataaaaccatca 396

>gb|AY547583.1| Solanum tuberosum clone 1245 R1-like (R1) gene, partial sequence
          Length = 1562

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  aagtccagcatcaaatataa 321
            ||||||||||||||||||||
Sbjct: 1017 aagtccagcatcaaatataa 998

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 306      ccagcatcaaatataaaaccatca 329
                ||||||||| ||||||||||||||
Sbjct: 29606905 ccagcatcatatataaaaccatca 29606928

>gb|AC008128.19| Homo sapiens 12 BAC RP11-410A13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 126541

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    gcgtaaggtaacgtaacgtaacgt 92
             |||||| |||||||||||||||||
Sbjct: 52629 gcgtaacgtaacgtaacgtaacgt 52606

>emb|CR753871.6| Zebrafish DNA sequence from clone CH211-247M23 in linkage group 15,
             complete sequence
          Length = 147392

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    gcgtaaggtaacgtaacgtaacgt 92
             |||||| |||||||||||||||||
Sbjct: 26550 gcgtaacgtaacgtaacgtaacgt 26527

>ref|XM_503196.1| Yarrowia lipolytica CLIB122, YALI0D23595g predicted mRNA
          Length = 1350

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 143 ccgtcttcttccgcagctcctcga 166
           ||||||||| ||||||||||||||
Sbjct: 994 ccgtcttctcccgcagctcctcga 971

>emb|AL159153.17| Human DNA sequence from clone RP11-291I6 on chromosome 13 Contains part
             of the COL4A2 gene for collagen type IV alpha 2 and a CpG
             island, complete sequence
          Length = 102319

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   aggtgaaggtggtgcgcggg 223
             ||||||||||||||||||||
Sbjct: 60213 aggtgaaggtggtgcgcggg 60232

>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72
          Length = 198924

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  aaatataaaaccatcaaccc 333
            ||||||||||||||||||||
Sbjct: 1260 aaatataaaaccatcaaccc 1279

>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71
          Length = 200001

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    aaatataaaaccatcaaccc 333
              ||||||||||||||||||||
Sbjct: 196261 aaatataaaaccatcaaccc 196280

>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project)
          Length = 98401

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   aaatataaaaccatcaaccc 333
             ||||||||||||||||||||
Sbjct: 86188 aaatataaaaccatcaaccc 86207

>gb|DQ378290.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 10J19, complete
            sequence
          Length = 34783

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 69   gcgtaaggtaacgtaacgtaacgt 92
            |||||| |||||||||||||||||
Sbjct: 6390 gcgtaacgtaacgtaacgtaacgt 6413

>gb|AC104793.4| Homo sapiens BAC clone RP11-234O6 from 4, complete sequence
          Length = 133244

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    gcgtaaggtaacgtaacgtaacgt 92
             |||||| |||||||||||||||||
Sbjct: 17265 gcgtaacgtaacgtaacgtaacgt 17242

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 306      ccagcatcaaatataaaaccatca 329
                ||||||||| ||||||||||||||
Sbjct: 29698327 ccagcatcatatataaaaccatca 29698350

>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete
              sequence
          Length = 132782

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 306    ccagcatcaaatataaaaccatca 329
              ||||||||| ||||||||||||||
Sbjct: 129535 ccagcatcatatataaaaccatca 129558

>dbj|AK073220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000K23, full
            insert sequence
          Length = 3425

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 306  ccagcatcaaatataaaaccatca 329
            ||||||||| ||||||||||||||
Sbjct: 1234 ccagcatcatatataaaaccatca 1211

>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    gggttgaacctggccatctg 240
              ||||||||||||||||||||
Sbjct: 969407 gggttgaacctggccatctg 969426

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      taaggtaacgtaacgtaacg 91
               ||||||||||||||||||||
Sbjct: 4911718 taaggtaacgtaacgtaacg 4911699

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 143     ccgtcttcttccgcagctcctcga 166
               ||||||||| ||||||||||||||
Sbjct: 3068372 ccgtcttctcccgcagctcctcga 3068349


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,417,741
Number of Sequences: 3902068
Number of extensions: 3417741
Number of successful extensions: 74170
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73893
Number of HSP's gapped (non-prelim): 267
length of query: 384
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 362
effective length of database: 17,147,199,772
effective search space: 6207286317464
effective search space used: 6207286317464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)