ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4l24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 147 4e-32
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
3gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, comple... 42 1.8
4gb|AY182007.1| Monoblepharella sp. JEL15 mitochondrion, complete... 42 1.8
5gb|AC107734.13| Mus musculus chromosome 7, clone RP23-399E4, com... 40 7.2
6ref|XM_630278.1| Dictyostelium discoideum hypothetical protein (... 40 7.2
7gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, com... 40 7.2
8gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic ... 40 7.2
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.2
10gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complet... 40 7.2
11gb|AC127319.4| Mus musculus BAC clone RP23-229N3 from 5, complet... 40 7.2
12gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete... 40 7.2
13gb|AC124120.5| Mus musculus chromosome 1, clone RP24-64M13, comp... 40 7.2
14gb|AC135604.29| Medicago truncatula clone mth2-32p10, complete s... 40 7.2
15gb|AC144517.7| Medicago truncatula clone mth2-13k17, complete se... 40 7.2
16gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete s... 40 7.2
17emb|AL591804.5| Human DNA sequence from clone RP11-457O1 on chro... 40 7.2
18gb|AC161432.5| Mus musculus chromosome 1, clone RP23-453N14, com... 40 7.2
19emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chr... 40 7.2
20emb|BX510946.18| Zebrafish DNA sequence from clone CH211-9F9 in ... 40 7.2
21gb|AC005185.1| Homo sapiens Xp22 BAC GSHB-383H3 (Genome Systems ... 40 7.2
22emb|CR762498.10| Zebrafish DNA sequence from clone DKEY-4J1 in l... 40 7.2
23gb|AC090108.15| Homo sapiens 12q BAC RP11-395D5 (Roswell Park Ca... 40 7.2
24gb|AC116364.2| Homo sapiens chromosome 5 clone RP11-767I1, compl... 40 7.2
25gb|AC019188.6| Homo sapiens BAC clone RP11-309H6 from 4, complet... 40 7.2
26gb|AC092331.2| Homo sapiens chromosome 5 clone RP11-163B12, comp... 40 7.2
27emb|CR388026.3| Mouse DNA sequence from clone RP23-39L16 on chro... 40 7.2
28gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosom... 40 7.2
29gb|AC153649.4| Mus musculus BAC clone RP24-93B8 from chromosome ... 40 7.2
30gb|AY627662.1| Sus scrofa microsatellite Ki 010 sequence 40 7.2
31gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cance... 40 7.2
32dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
36gb|AC022345.2|AC022345 Drosophila melanogaster, chromosome X, re... 40 7.2
37gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, re... 40 7.2
38gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome... 40 7.2
39dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
40dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
41dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
42gb|AC116469.13| Mus musculus chromosome 5, clone RP23-171F16, co... 40 7.2
43gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ... 40 7.2
44gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone... 40 7.2
45dbj|AP004547.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 7.2
46dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.2
47emb|AL831757.5| Mouse DNA sequence from clone RP23-279A21 on chr... 40 7.2 
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score =  147 bits (74), Expect = 4e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                         
Query: 112   gtactcaacctttgtgaactgggaactatggtggccacaatttcctatccttgtttactt 171
             ||||||||| |||||||| |||||||| ||||||||||||||||||||| | ||||| ||
Sbjct: 69560 gtactcaacatttgtgaattgggaactgtggtggccacaatttcctatcttggtttattt 69501

                                                                   
Query: 172   caaagagacccaaacaaaacccgaaggccagattcatttcttcccagtgatttt 225
             ||| ||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 69500 caaggagacccaaacaaaacccgaagggcaaattcatttcttccctgtgatttt 69447



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 40    ggaagtgaaagtgggcaatcagctgcaggagtcaggtgagaacgtatttgttggtggcaa 99
             |||||||||||||||| ||||| |  ||||||||||||| || |||||||| ||||||||
Sbjct: 69870 ggaagtgaaagtgggcgatcagttagaggagtcaggtgaaaatgtatttgtcggtggcaa 69811

                        
Query: 100   gaaccgttgga 110
             ||| |||||||
Sbjct: 69810 gaatcgttgga 69800



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 230   ggccgacaactctatgatattatggtggagcgtgctggaccgtcggaaac 279
             |||||||| || ||||||  ||||||||||||||||||||| ||||||||
Sbjct: 69366 ggccgacagctttatgatgctatggtggagcgtgctggaccttcggaaac 69317
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  147 bits (74), Expect = 4e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                            
Query: 112      gtactcaacctttgtgaactgggaactatggtggccacaatttcctatccttgtttactt 171
                ||||||||| |||||||| |||||||| ||||||||||||||||||||| | ||||| ||
Sbjct: 19366211 gtactcaacatttgtgaattgggaactgtggtggccacaatttcctatcttggtttattt 19366152

                                                                      
Query: 172      caaagagacccaaacaaaacccgaaggccagattcatttcttcccagtgatttt 225
                ||| ||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 19366151 caaggagacccaaacaaaacccgaagggcaaattcatttcttccctgtgatttt 19366098



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 40       ggaagtgaaagtgggcaatcagctgcaggagtcaggtgagaacgtatttgttggtggcaa 99
                |||||||||||||||| ||||| |  ||||||||||||| || |||||||| ||||||||
Sbjct: 19366521 ggaagtgaaagtgggcgatcagttagaggagtcaggtgaaaatgtatttgtcggtggcaa 19366462

                           
Query: 100      gaaccgttgga 110
                ||| |||||||
Sbjct: 19366461 gaatcgttgga 19366451



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 230      ggccgacaactctatgatattatggtggagcgtgctggaccgtcggaaac 279
                |||||||| || ||||||  ||||||||||||||||||||| ||||||||
Sbjct: 19366017 ggccgacagctttatgatgctatggtggagcgtgctggaccttcggaaac 19365968
to top
>gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, complete sequence
          Length = 157607

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 376    aatctccatgcattatttgaagaaa 400
              ||||||||||| |||||||||||||
Sbjct: 107936 aatctccatgctttatttgaagaaa 107960
to top
>gb|AY182007.1| Monoblepharella sp. JEL15 mitochondrion, complete genome
          Length = 60432

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 318  taagttccaggagccaaaatc 338
            |||||||||||||||||||||
Sbjct: 1154 taagttccaggagccaaaatc 1134



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 aagttccaggagccaaaatc 338
           ||||||||||||||||||||
Sbjct: 213 aagttccaggagccaaaatc 232
to top
>gb|AC107734.13| Mus musculus chromosome 7, clone RP23-399E4, complete sequence
          Length = 198485

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    caaagagacccaaacaaaac 191
              ||||||||||||||||||||
Sbjct: 160235 caaagagacccaaacaaaac 160216
to top
>ref|XM_630278.1| Dictyostelium discoideum hypothetical protein (DDB0189286), partial
            mRNA
          Length = 4728

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 451  agatgaatcaaataattgtt 470
            ||||||||||||||||||||
Sbjct: 2763 agatgaatcaaataattgtt 2744
to top
>gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, complete sequence
          Length = 205513

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    ccacaatttcctatccttgt 165
              ||||||||||||||||||||
Sbjct: 135816 ccacaatttcctatccttgt 135797
to top
>gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic sequence, complete
             sequence
          Length = 73070

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   attaatacttcctccgttcc 527
             ||||||||||||||||||||
Sbjct: 20287 attaatacttcctccgttcc 20306
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 508      attaatacttcctccgttcc 527
                ||||||||||||||||||||
Sbjct: 22392157 attaatacttcctccgttcc 22392138
to top
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence
          Length = 242112

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   catttcttcccagtgatttt 225
             ||||||||||||||||||||
Sbjct: 62676 catttcttcccagtgatttt 62657
to top
>gb|AC127319.4| Mus musculus BAC clone RP23-229N3 from 5, complete sequence
          Length = 188794

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 381   ccatgcattatttgaagaaactac 404
             ||||||||||||| ||||||||||
Sbjct: 39072 ccatgcattattttaagaaactac 39049
to top
>gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete sequence
          Length = 171124

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    tgatgatgatgccctggaag 44
             ||||||||||||||||||||
Sbjct: 75787 tgatgatgatgccctggaag 75806
to top
>gb|AC124120.5| Mus musculus chromosome 1, clone RP24-64M13, complete sequence
          Length = 242227

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    gtgtcttcattaagtgtgtt 362
              ||||||||||||||||||||
Sbjct: 160303 gtgtcttcattaagtgtgtt 160322
to top
>gb|AC135604.29| Medicago truncatula clone mth2-32p10, complete sequence
          Length = 136735

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 509   ttaatacttcctccgttcct 528
             ||||||||||||||||||||
Sbjct: 18629 ttaatacttcctccgttcct 18610
to top
>gb|AC144517.7| Medicago truncatula clone mth2-13k17, complete sequence
          Length = 107710

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   aatacttcctccgttccttt 530
             ||||||||||||||||||||
Sbjct: 33702 aatacttcctccgttccttt 33721
to top
>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence
          Length = 119297

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   aatacttcctccgttccttt 530
             ||||||||||||||||||||
Sbjct: 16298 aatacttcctccgttccttt 16317
to top
>emb|AL591804.5| Human DNA sequence from clone RP11-457O1 on chromosome X, complete
             sequence
          Length = 112366

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   tgtatatccaacatgatgta 502
             ||||||||||||||||||||
Sbjct: 60998 tgtatatccaacatgatgta 60979
to top
>gb|AC161432.5| Mus musculus chromosome 1, clone RP23-453N14, complete sequence
          Length = 199303

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   gtgtcttcattaagtgtgtt 362
             ||||||||||||||||||||
Sbjct: 67438 gtgtcttcattaagtgtgtt 67457
to top
>emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chromosome 11 Contains the
             5' end of a novel gene, a ribosomal protein L7A (Rpl7a)
             pseudogene and a CpG island, complete sequence
          Length = 127405

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    tgccctggaagtgaaagtgggcaa 57
             |||| |||||||||||||||||||
Sbjct: 82882 tgccatggaagtgaaagtgggcaa 82859
to top
>emb|BX510946.18| Zebrafish DNA sequence from clone CH211-9F9 in linkage group 13,
             complete sequence
          Length = 103700

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   attatttgaagaaactactt 406
             ||||||||||||||||||||
Sbjct: 92664 attatttgaagaaactactt 92683
to top
>gb|AC005185.1| Homo sapiens Xp22 BAC GSHB-383H3 (Genome Systems Human BAC Library)
             complete sequence
          Length = 124351

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   atttcttcccagtgattttc 226
             ||||||||||||||||||||
Sbjct: 86002 atttcttcccagtgattttc 86021
to top
>emb|CR762498.10| Zebrafish DNA sequence from clone DKEY-4J1 in linkage group 13,
             complete sequence
          Length = 169361

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   attatttgaagaaactactt 406
             ||||||||||||||||||||
Sbjct: 83958 attatttgaagaaactactt 83977
to top
>gb|AC090108.15| Homo sapiens 12q BAC RP11-395D5 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 168837

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ggaagtgaaagtgggcaatc 59
             ||||||||||||||||||||
Sbjct: 55146 ggaagtgaaagtgggcaatc 55127
to top
>gb|AC116364.2| Homo sapiens chromosome 5 clone RP11-767I1, complete sequence
          Length = 188887

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   tgaagaaactacttcaacta 412
             ||||||||||||||||||||
Sbjct: 67704 tgaagaaactacttcaacta 67685
to top
>gb|AC019188.6| Homo sapiens BAC clone RP11-309H6 from 4, complete sequence
          Length = 207835

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    gaaatctccatgcattattt 393
              ||||||||||||||||||||
Sbjct: 134072 gaaatctccatgcattattt 134091
to top
>gb|AC092331.2| Homo sapiens chromosome 5 clone RP11-163B12, complete sequence
          Length = 162153

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    tgaagaaactacttcaacta 412
              ||||||||||||||||||||
Sbjct: 129245 tgaagaaactacttcaacta 129264
to top
>emb|CR388026.3| Mouse DNA sequence from clone RP23-39L16 on chromosome 2, complete
             sequence
          Length = 26069

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   aaacaaaacccgaaggccag 202
             ||||||||||||||||||||
Sbjct: 22262 aaacaaaacccgaaggccag 22243
to top
>gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosome 13, complete
             sequence
          Length = 201777

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   ttgaagaaactacttcaact 411
             ||||||||||||||||||||
Sbjct: 22744 ttgaagaaactacttcaact 22763
to top
>gb|AC153649.4| Mus musculus BAC clone RP24-93B8 from chromosome 1, complete sequence
          Length = 162838

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     tgatgatgatgccctggaag 44
              ||||||||||||||||||||
Sbjct: 105211 tgatgatgatgccctggaag 105230
to top
>gb|AY627662.1| Sus scrofa microsatellite Ki 010 sequence
          Length = 525

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 487 tatccaacatgatgtatatt 506
           ||||||||||||||||||||
Sbjct: 125 tatccaacatgatgtatatt 106
to top
>gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206705

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 204    ttcatttcttcccagtgattttca 227
              ||||||||||| ||||||||||||
Sbjct: 120066 ttcatttcttctcagtgattttca 120089
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                               
Query: 407     caactagtaggatgccccgtgcgttgctacgg 438
               ||||||||||| ||||| ||||||||||||||
Sbjct: 1824498 caactagtagggtgccc-gtgcgttgctacgg 1824468
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 415      aggatgccccgtgcgttgct 434
                ||||||||||||||||||||
Sbjct: 27653996 aggatgccccgtgcgttgct 27654015
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 508      attaatacttcctccgttcc 527
                ||||||||||||||||||||
Sbjct: 22385186 attaatacttcctccgttcc 22385167
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 415      aggatgccccgtgcgttgct 434
                ||||||||||||||||||||
Sbjct: 30853941 aggatgccccgtgcgttgct 30853922
to top
>gb|AC022345.2|AC022345 Drosophila melanogaster, chromosome X, region 12F-13A, BAC clone
              BACR10J19, complete sequence
          Length = 182416

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 462    ataattgttcttatttggaagtgt 485
              ||||||||||||| ||||||||||
Sbjct: 175225 ataattgttcttaattggaagtgt 175202
to top
>gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, region 13A-13B, BAC clone
             BACR09F03, complete sequence
          Length = 165118

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 462   ataattgttcttatttggaagtgt 485
             ||||||||||||| ||||||||||
Sbjct: 26351 ataattgttcttaattggaagtgt 26328
to top
>gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome 13, complete sequence
          Length = 157775

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   ttgaagaaactacttcaact 411
             ||||||||||||||||||||
Sbjct: 96705 ttgaagaaactacttcaact 96724
to top
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0638D12
          Length = 161277

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   aggatgccccgtgcgttgct 434
             ||||||||||||||||||||
Sbjct: 54308 aggatgccccgtgcgttgct 54289
to top
>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0011H15
          Length = 130146

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   aggatgccccgtgcgttgct 434
             ||||||||||||||||||||
Sbjct: 51340 aggatgccccgtgcgttgct 51359
to top
>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1227_D07
          Length = 118358

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 407   caactagtaggatgccccgtgcgttgctacgg 438
             ||||||||||| ||||| ||||||||||||||
Sbjct: 63160 caactagtagggtgccc-gtgcgttgctacgg 63130
to top
>gb|AC116469.13| Mus musculus chromosome 5, clone RP23-171F16, complete sequence
          Length = 207364

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 381   ccatgcattatttgaagaaactac 404
             ||||||||||||| ||||||||||
Sbjct: 15772 ccatgcattattttaagaaactac 15795
to top
>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
             sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 462   ataattgttcttatttggaagtgt 485
             ||||||||||||| ||||||||||
Sbjct: 27106 ataattgttcttaattggaagtgt 27083
to top
>gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone rp23-310n21, complete
              sequence
          Length = 216807

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    catttcttcccagtgatttt 225
              ||||||||||||||||||||
Sbjct: 199415 catttcttcccagtgatttt 199396
to top
>dbj|AP004547.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT31L24, TM0228a,
             complete sequence
          Length = 65103

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 508   attaatacttcctccgttcctttatata 535
             ||||||||| ||||||||||| ||||||
Sbjct: 56367 attaatactccctccgttcctatatata 56394
to top
>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020,
             complete sequence
          Length = 80920

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 512   atacttcctccgttcctttatata 535
             |||||||||||||||||| |||||
Sbjct: 22658 atacttcctccgttccttaatata 22681
to top
>emb|AL831757.5| Mouse DNA sequence from clone RP23-279A21 on chromosome X, complete
             sequence
          Length = 85948

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ttcccagtgattttcaatgg 231
             ||||||||||||||||||||
Sbjct: 70879 ttcccagtgattttcaatgg 70860


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,396,553
Number of Sequences: 3902068
Number of extensions: 5396553
Number of successful extensions: 95668
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 95300
Number of HSP's gapped (non-prelim): 371
length of query: 535
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 512
effective length of database: 17,143,297,704
effective search space: 8777368424448
effective search space used: 8777368424448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top