ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4n06 |
|---|---|
| Clone Library Name | barley_pub |
>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 188 bits (477), Expect = 3e-48 Identities = 94/104 (90%), Positives = 97/104 (93%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 APTVM+S+AT+VAPFQGLKSTAGLPVSR S N A LGSVSNGGRIRCMQVWPIEGIKKFE Sbjct: 2 APTVMASSATSVAPFQGLKSTAGLPVSRRS-NGASLGSVSNGGRIRCMQVWPIEGIKKFE 60 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 TLSYLPPLSTE LLKQVDYLIRSKWVPCLEF KVGFIFREHN S Sbjct: 61 TLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFRKVGFIFREHNVS 104
>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 Score = 186 bits (471), Expect = 2e-47 Identities = 94/104 (90%), Positives = 97/104 (93%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 APTVM+S+AT+VAPFQGLKSTAGLPVSR S A SVSNGGRIRCMQVWPIEGIKKFE Sbjct: 2 APTVMASSATSVAPFQGLKSTAGLPVSRRSN--ASSASVSNGGRIRCMQVWPIEGIKKFE 59 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS Sbjct: 60 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 103
>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 Score = 184 bits (468), Expect = 4e-47 Identities = 91/104 (87%), Positives = 97/104 (93%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 AP VM+S+AT VAPFQGLKSTAGLP+S SG+ GL SVSNGGRIRCMQVWPIEGIKKFE Sbjct: 2 APAVMASSATTVAPFQGLKSTAGLPISCRSGST-GLSSVSNGGRIRCMQVWPIEGIKKFE 60 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGF+FREHN+S Sbjct: 61 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSS 104
>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 Score = 182 bits (462), Expect = 2e-46 Identities = 91/104 (87%), Positives = 96/104 (92%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 AP VM+S+AT VAPFQGLKSTAGLPVSR S + LGSVSNGGRIRCMQVWPIEGIKKFE Sbjct: 2 APAVMASSATTVAPFQGLKSTAGLPVSRRSRGS--LGSVSNGGRIRCMQVWPIEGIKKFE 59 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 TLSYLPPLSTEAL KQVDYLIRSKWVPCLEFSKVGF+FREHN+S Sbjct: 60 TLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSS 103
>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 175 Score = 172 bits (435), Expect = 2e-43 Identities = 81/104 (77%), Positives = 97/104 (93%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 AP+VM+S+AT VAPFQGLKSTAG+PV+R SGN++ G+VSNGGRIRCMQVWPIEGIKKFE Sbjct: 2 APSVMASSATTVAPFQGLKSTAGMPVARRSGNSS-FGNVSNGGRIRCMQVWPIEGIKKFE 60 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ S Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRS 104
>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) Length = 175 Score = 169 bits (428), Expect = 2e-42 Identities = 82/104 (78%), Positives = 96/104 (92%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 APTVM+S+AT+VAPFQGLKSTAGLPVSR S N+ G G+VSNGGRI+ MQVWPIEGIKKFE Sbjct: 2 APTVMASSATSVAPFQGLKSTAGLPVSRRSTNS-GFGNVSNGGRIKFMQVWPIEGIKKFE 60 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ S Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRS 104
>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 170 Score = 157 bits (398), Expect = 5e-39 Identities = 79/105 (75%), Positives = 92/105 (87%), Gaps = 1/105 (0%) Frame = +1 Query: 1 APTVM-SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 APTVM +S+ATAVAPFQGLKSTA LPV+R S + LG+VSNGGRIRCMQVWP G KKF Sbjct: 2 APTVMMASSATAVAPFQGLKSTASLPVARRSSRS--LGNVSNGGRIRCMQVWPAYGNKKF 59 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 ETLSYLPPLST+ LLKQVDYL+R+ W+PCLEFSKVGF++RE++ S Sbjct: 60 ETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYRENSTS 104
>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 150 bits (380), Expect = 6e-37 Identities = 75/104 (72%), Positives = 85/104 (81%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 A TVM+S+ATA APFQGLKSTA LPV+R S L VSNGGRIRCMQVWP G KKFE Sbjct: 2 ALTVMASSATAAAPFQGLKSTASLPVARRS--TTSLAKVSNGGRIRCMQVWPAYGNKKFE 59 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 TLSYLPPL+ E LLKQVDYL+R+ WVPCLEFSK GF++RE++ S Sbjct: 60 TLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYRENSTS 103
>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 172 Score = 125 bits (315), Expect = 2e-29 Identities = 64/104 (61%), Positives = 79/104 (75%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 AP+VM+S+AT VAPFQG ++ P R + L +GGRIRCMQVWPIEGIKKFE Sbjct: 2 APSVMASSATTVAPFQG---SSPPPACRRPPSELQLRQRQHGGRIRCMQVWPIEGIKKFE 58 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 TLSYLPPL+ E LLKQ++YL + VPCLEFSKVGF++RE++ S Sbjct: 59 TLSYLPPLTVEDLLKQIEYLAPFQVVPCLEFSKVGFVYRENHKS 102
>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5A) Length = 177 Score = 125 bits (314), Expect = 3e-29 Identities = 58/96 (60%), Positives = 74/96 (77%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 ++ VAPF GL+S+ P +R + N SNGGR+ CMQVWP EG+KKFETLSYLPPL Sbjct: 20 SSMVAPFNGLRSSVAFPATRKANNDLST-LPSNGGRVSCMQVWPPEGLKKFETLSYLPPL 78 Query: 205 STEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 S E L K+VDYL+R+ WVPC+EFSK GF++RE++AS Sbjct: 79 SVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114
>RBS1_FRIAG (O24634) Ribulose bisphosphate carboxylase small chain 1/4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1/4) Length = 179 Score = 125 bits (314), Expect = 3e-29 Identities = 66/113 (58%), Positives = 84/113 (74%), Gaps = 11/113 (9%) Frame = +1 Query: 7 TVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVW 153 T++SS ATA VAPF GLKST+ PV++ A GL ++ SNGGR++CM+VW Sbjct: 6 TMLSSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKP--ATGLSTLPSNGGRVQCMKVW 63 Query: 154 PIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 PI G+KKFETLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKS 116
>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5B) Length = 177 Score = 125 bits (313), Expect = 3e-29 Identities = 58/93 (62%), Positives = 72/93 (77%) Frame = +1 Query: 34 VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTE 213 VAPF GL+S+ P +R + N SNGGR+ CMQVWP EG+KKFETLSYLPPLS E Sbjct: 23 VAPFNGLRSSVAFPATRKANNDLST-LPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVE 81 Query: 214 ALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 L K+VDYL+R+ WVPC+EFSK GF++RE++AS Sbjct: 82 DLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114
>RBS5_FRIAG (O22645) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 179 Score = 124 bits (311), Expect = 6e-29 Identities = 65/113 (57%), Positives = 84/113 (74%), Gaps = 11/113 (9%) Frame = +1 Query: 7 TVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVW 153 T++SS ATA VAPF GLKS + PV++ + A GL ++ SNGGR++CM+VW Sbjct: 6 TMLSSVATAACAAPAQASMVAPFVGLKSASAFPVTQKT--ATGLSTLPSNGGRVQCMKVW 63 Query: 154 PIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 PI G+KKFETLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKS 116
>RBS3_FRIAG (O22573) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 179 Score = 123 bits (309), Expect = 1e-28 Identities = 65/113 (57%), Positives = 83/113 (73%), Gaps = 11/113 (9%) Frame = +1 Query: 7 TVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVW 153 T++SS ATA VAPF GLKS + PV++ A GL ++ SNGGR++CM+VW Sbjct: 6 TMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKP--ATGLSTLPSNGGRVQCMKVW 63 Query: 154 PIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 PI G+KKFETLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKS 116
>RBS2_FRIAG (O22572) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 179 Score = 122 bits (307), Expect = 2e-28 Identities = 64/113 (56%), Positives = 83/113 (73%), Gaps = 11/113 (9%) Frame = +1 Query: 7 TVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVW 153 T++SS ATA VAPF GLKS + PV++ + GL ++ SNGGR++CM+VW Sbjct: 6 TMLSSVATAACVAPAQASMVAPFVGLKSASAFPVTQKT--VTGLSTLPSNGGRVQCMKVW 63 Query: 154 PIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 PI G+KKFETLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKS 116
>RBS_MUSAC (O24045) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 122 bits (306), Expect = 2e-28 Identities = 57/96 (59%), Positives = 75/96 (78%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 ++ VAPF GLKS + PV+R NA SNGGR++CM+VWPIEG+KKFETLSYLP + Sbjct: 21 SSMVAPFTGLKSASAFPVTR-KPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLPTM 79 Query: 205 STEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 EAL+KQ++YL+RSKW+PCLEF GF++RE++ S Sbjct: 80 KDEALVKQIEYLLRSKWIPCLEFCPKGFVWRENHRS 115
>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 122 bits (306), Expect = 2e-28 Identities = 58/97 (59%), Positives = 75/97 (77%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A VAPF GLKS++ PV+R S + + S NGGR++CMQVWP G+KKFETLSYLPPL Sbjct: 24 ARMVAPFNGLKSSSAFPVTRKSNDITSIAS--NGGRVQCMQVWPPLGLKKFETLSYLPPL 81 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 S+E+L K+VDYL+R WVPCLEF + GF++RE++ S Sbjct: 82 SSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRS 118
>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 181 Score = 122 bits (305), Expect = 3e-28 Identities = 62/115 (53%), Positives = 81/115 (70%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +++SSAA A VAPF GLKS A PV++ + N SNGGR+RCMQV Sbjct: 2 ASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQV 61 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++REHN+S Sbjct: 62 WPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSS 116
>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU26) Length = 177 Score = 122 bits (305), Expect = 3e-28 Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 1/94 (1%) Frame = +1 Query: 34 VAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVWPIEGIKKFETLSYLPPLST 210 VAPF GL+S+ P +R + L ++ SNGG++ CMQVWP EG+KKFETLSYLPPLS Sbjct: 23 VAPFNGLRSSVAFPATRKANK--NLSTLPSNGGKVSCMQVWPPEGLKKFETLSYLPPLSV 80 Query: 211 EALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 E L K+VDYL+R+ WVPC+EFSK GF++RE++AS Sbjct: 81 EDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114
>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A) Length = 180 Score = 121 bits (304), Expect = 4e-28 Identities = 62/109 (56%), Positives = 79/109 (72%), Gaps = 5/109 (4%) Frame = +1 Query: 1 APTVMSSAAT----AVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGI 168 A T +S A+T AVAPF GLKS G PV +++ + + SNGGR++CMQVWP G Sbjct: 9 AVTTVSRASTVQSAAVAPFGGLKSMTGFPVKKVNTDITSI--TSNGGRVKCMQVWPPIGK 66 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 KKFETLSYLPPL+ + LLK+V+YL+R WVPCLEF + GF++REHN S Sbjct: 67 KKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKS 115
>RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 121 bits (304), Expect = 4e-28 Identities = 59/97 (60%), Positives = 75/97 (77%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A VAPF GLKS++ PV+R S + + S NGGR++CMQVWP G+KKFETLSYLPPL Sbjct: 24 ARMVAPFTGLKSSSASPVTRKSNDITSIAS--NGGRVQCMQVWPPLGLKKFETLSYLPPL 81 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 STE+L K+VDYL+R WVPCLEF + GF++RE++ S Sbjct: 82 STESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRS 118
>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40B) Length = 177 Score = 120 bits (302), Expect = 7e-28 Identities = 61/114 (53%), Positives = 78/114 (68%), Gaps = 10/114 (8%) Frame = +1 Query: 1 APTVMSSAATAVA----------PFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A ++M+S A AVA PF +S+ P +R + N SNGGR+ CMQV Sbjct: 2 ASSMMASTAAAVARAGPAQTNMVPFNACRSSVPFPATRKANNDLST-LPSNGGRVSCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 WP EG+KKFETLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++AS Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114
>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 120 bits (300), Expect = 1e-27 Identities = 60/116 (51%), Positives = 82/116 (70%), Gaps = 12/116 (10%) Frame = +1 Query: 1 APTVMSSAATA-----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 147 A +V+SSAA A VAPF GLKST G P ++ + + L S NGGR++CM+ Sbjct: 2 ASSVLSSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLAS--NGGRVQCMK 59 Query: 148 VWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 VWP + +K++ETLSYLPPL+T+ L +QVDYL+ +KWVPCLEF + GF++REH+ S Sbjct: 60 VWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNS 115
>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3C) (PSS15) Length = 180 Score = 119 bits (299), Expect = 1e-27 Identities = 57/97 (58%), Positives = 73/97 (75%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 + AVAPF GLKS G PV +++ + + SNGGR++CMQVWP G KKFETLSYLPPL Sbjct: 21 SAAVAPFGGLKSMTGFPVKKVNTDITSI--TSNGGRVKCMQVWPPIGKKKFETLSYLPPL 78 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 + + LLK+V+YL+R WVPCLEF + GF++REHN S Sbjct: 79 TRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKS 115
>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40A) Length = 177 Score = 119 bits (299), Expect = 1e-27 Identities = 61/115 (53%), Positives = 80/115 (69%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATAVA----------PFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQ 147 A ++M+S A AVA PF +S+ P +R + N L ++ NGGR+ CMQ Sbjct: 2 ASSMMASTAAAVARAGPAQSSMVPFNACRSSVPFPATRKANN--NLSTLPGNGGRVSCMQ 59 Query: 148 VWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 VWP EG+KKFETLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++AS Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHAS 114
>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2C) Length = 180 Score = 119 bits (298), Expect = 2e-27 Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +VMSSAA A VAPF GLKSTA PVSR N SNGGR+RCMQV Sbjct: 2 ASSVMSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQ-NLDITSIASNGGRVRCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N S Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKS 115
>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 119 bits (298), Expect = 2e-27 Identities = 57/100 (57%), Positives = 75/100 (75%), Gaps = 1/100 (1%) Frame = +1 Query: 16 SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 195 S+ A+ APF GLKS PV++ + N SNGGR++CM+VWP G+KK+ETLSYL Sbjct: 17 STQASLAAPFTGLKSNVAFPVTKKANNDFS-SLPSNGGRVQCMKVWPPIGLKKYETLSYL 75 Query: 196 PPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 PPLS EAL K++DYLIR+KW+PCLEF + GF++REH+ S Sbjct: 76 PPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHS 115
>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU1) Length = 173 Score = 119 bits (297), Expect = 3e-27 Identities = 56/101 (55%), Positives = 71/101 (70%) Frame = +1 Query: 10 VMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLS 189 V + V F G +S+ P +R + N S+GGR+ CMQVWP EG+KKFETLS Sbjct: 11 VRPAQTNMVGAFNGCRSSVAFPATRKANNDLST-LPSSGGRVSCMQVWPPEGLKKFETLS 69 Query: 190 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 YLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE+NAS Sbjct: 70 YLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENNAS 110
>RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 183 Score = 119 bits (297), Expect = 3e-27 Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 6/107 (5%) Frame = +1 Query: 1 APTVMSSAATA-----VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 165 A T M++A T VAPF GLKS + PV+R + + + S NGGR++CMQVWP G Sbjct: 9 AATTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDITSVAS--NGGRVQCMQVWPPLG 66 Query: 166 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREH 303 +KKFETLSYLPPLS E+LLK+V YL+ + WVPCLEF GF++REH Sbjct: 67 MKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREH 113
>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 117 bits (293), Expect = 7e-27 Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 1/100 (1%) Frame = +1 Query: 16 SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 195 S+ A VAPF GLKS+AG PV++ + N SNGGR+ CMQVWP G KKFETLSYL Sbjct: 17 SAQANLVAPFTGLKSSAGFPVTKKTNNDI-TSIASNGGRVNCMQVWPPVGKKKFETLSYL 75 Query: 196 PPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 PPL+ E L K+V+YLIR W+PCLEF + GF++RE++ S Sbjct: 76 PPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRS 115
>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) Length = 180 Score = 117 bits (293), Expect = 7e-27 Identities = 65/115 (56%), Positives = 79/115 (68%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +VMSSAA A VAPF GLKS A PVSR N SNGGR+RCMQV Sbjct: 2 ASSVMSSAAVATRGNGAQASMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVRCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N S Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKS 115
>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 117 bits (292), Expect = 1e-26 Identities = 62/115 (53%), Positives = 80/115 (69%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A ++MSSAA A VAPF GLKS A PVSR + N SNGGR+RCMQV Sbjct: 2 ASSIMSSAAVATRSNGAQASMVAPFTGLKSNASFPVSRKT-NLDITSIASNGGRVRCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS+E LL +++YL+++ WVPCLEF ++ GF++REH +S Sbjct: 61 WPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSS 115
>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) (LESS17) Length = 181 Score = 117 bits (292), Expect = 1e-26 Identities = 59/115 (51%), Positives = 80/115 (69%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +++SSAA A VAPF GLKS A PV++ + N SNGGR+RCMQV Sbjct: 2 ASSIVSSAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQV 61 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE+N+S Sbjct: 62 WPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSS 116
>RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 117 bits (292), Expect = 1e-26 Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 6/107 (5%) Frame = +1 Query: 1 APTVMSSAATA-----VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 165 A T M++A T VAPF GLKS + PV+R + + + S NGGR++CMQVWP G Sbjct: 9 AATTMAAATTTAQANMVAPFNGLKSVSAFPVTRKNNDITSVAS--NGGRVQCMQVWPPLG 66 Query: 166 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREH 303 KKFETLSYLPPLS E+L+K+V YL+ + WVPCLEF GF++REH Sbjct: 67 KKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREH 113
>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 181 Score = 116 bits (291), Expect = 1e-26 Identities = 60/115 (52%), Positives = 80/115 (69%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +++SSAA A VAPF GLKS A PV++ + N SNGGR+RCMQV Sbjct: 2 ASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQV 61 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE++ S Sbjct: 62 WPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKS 116
>RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 116 bits (291), Expect = 1e-26 Identities = 56/93 (60%), Positives = 72/93 (77%) Frame = +1 Query: 34 VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTE 213 V PF GL S+A PV+R +++ L S NG R+RCMQVWP EG KKFETLSYLPPL+ E Sbjct: 23 VVPFAGLHSSAAFPVTRKFADSSKLPS--NGLRVRCMQVWPPEGKKKFETLSYLPPLTRE 80 Query: 214 ALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 L ++VDYLIR+ W+PC+EF KVGF++RE++ S Sbjct: 81 QLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNS 113
>RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 186 Score = 116 bits (290), Expect = 2e-26 Identities = 59/95 (62%), Positives = 72/95 (75%), Gaps = 2/95 (2%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVWPIEGIKKFETLSYLPP 201 A+ VAPF GLKS + PV+R S N L +V SNGG+++CMQVWP G KKFETLSYLPP Sbjct: 24 ASMVAPFTGLKSVSAFPVTRKSSN--DLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPP 81 Query: 202 LSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREH 303 LS E+LLK+V YL+ + WVPCLEF GF++REH Sbjct: 82 LSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREH 116
>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 180 Score = 115 bits (289), Expect = 2e-26 Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +++SSAA A V PF GLKSTA PVSR N SNGGR+RCMQV Sbjct: 2 ASSIVSSAAVATRANGAQASMVGPFTGLKSTASFPVSRKQ-NLDITSIASNGGRVRCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N S Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKS 115
>RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 115 bits (288), Expect = 3e-26 Identities = 55/94 (58%), Positives = 70/94 (74%), Gaps = 1/94 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A+ VAPF GLKS + PV++ S + + S NGGR++CMQVWP G KKFETLSYLPPL Sbjct: 19 ASMVAPFTGLKSVSAFPVTKKSNDITSIAS--NGGRVQCMQVWPPLGKKKFETLSYLPPL 76 Query: 205 STEALLKQVDYLIRSKWVPCLEFSKV-GFIFREH 303 S E+L+K+V YL+ + WVPCLEF GF++REH Sbjct: 77 SEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREH 110
>RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small chain 1A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) Length = 180 Score = 115 bits (287), Expect = 4e-26 Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 AT VAPF GLKS+A P +R + N SNGGR+ CMQVWP G KKFETLSYLP L Sbjct: 18 ATMVAPFNGLKSSAAFPATRKANNDI-TSITSNGGRVNCMQVWPPIGKKKFETLSYLPDL 76 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 + L K+VDYLIR+KW+PC+EF + GF++REH S Sbjct: 77 TDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNS 113
>RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 115 bits (287), Expect = 4e-26 Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 AT VAPF GLKSTA P +R S N SNGGR++CM+VWP G++KFETLSYLPPL Sbjct: 22 ATMVAPFTGLKSTAAFPATRKSNNDI-TSLASNGGRVQCMKVWPPLGLQKFETLSYLPPL 80 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 S E+L KQ++YLI W+PCLEF + F++RE+N S Sbjct: 81 SIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRS 117
>RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 115 bits (287), Expect = 4e-26 Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 1/103 (0%) Frame = +1 Query: 7 TVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETL 186 TV + A VAPF GLKS AGLP + + + + S NGGR++CMQVWP G KKFETL Sbjct: 13 TVNRAGAGMVAPFTGLKSMAGLPTRKTNNDITSIAS--NGGRVQCMQVWPPVGKKKFETL 70 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 SYLP L L K+V+YL+R W+PCLEF + GF++REHN S Sbjct: 71 SYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRS 113
>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU11A) Length = 180 Score = 114 bits (286), Expect = 5e-26 Identities = 63/115 (54%), Positives = 78/115 (67%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +VMSSAA A VAPF GLKS A PVSR N SNGGR++CMQV Sbjct: 2 ASSVMSSAAVATSTNAAQASMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVQCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP G KK+ETLSYLP L+ E LLK+++YL+ WVPCLEF ++ GF++RE++AS Sbjct: 61 WPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHAS 115
>RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 114 bits (286), Expect = 5e-26 Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 1/103 (0%) Frame = +1 Query: 7 TVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETL 186 TV + A VAPF GLKS AG P + + + A + S NGGR++CMQVWP G KKFETL Sbjct: 13 TVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIAS--NGGRVQCMQVWPTTGKKKFETL 70 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 SYLP L L K+V+YL+R W+PCLEF + GF++REH+ S Sbjct: 71 SYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRS 113
>RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 114 bits (285), Expect = 6e-26 Identities = 54/94 (57%), Positives = 70/94 (74%), Gaps = 1/94 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A+ VAPF GLKS A PV++ + + + + NGGR++CMQVWP G KKFETLSYLPPL Sbjct: 21 ASMVAPFNGLKSVAAFPVTKKNNDITSVAT--NGGRVQCMQVWPPLGKKKFETLSYLPPL 78 Query: 205 STEALLKQVDYLIRSKWVPCLEFSKV-GFIFREH 303 S E+L+K+V YL+ + WVPCLEF GF++REH Sbjct: 79 SEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREH 112
>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 114 bits (284), Expect = 8e-26 Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 ++ VAPF LKST+ PV++ + N SNGGR++CMQVWP G+KKFETLSYLPPL Sbjct: 22 SSMVAPFTCLKSTSAFPVTQKTNNDI-TSIASNGGRVQCMQVWPPLGLKKFETLSYLPPL 80 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 S+E L K+VDYL+R +PCLEF + GF++REHN S Sbjct: 81 SSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRS 117
>RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 181 Score = 113 bits (282), Expect = 1e-25 Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 1/94 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G KKFETLSYLP L Sbjct: 18 ATMVAPFTGLKSSASFPVTRKANNDI-TSITSNGGRVSCMKVWPPIGKKKFETLSYLPDL 76 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREH 303 S L K+VDYL+R+KW+PC+EF + GF++REH Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEFELEHGFVYREH 110
>RBS_PINTH (P10053) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 171 Score = 113 bits (282), Expect = 1e-25 Identities = 59/102 (57%), Positives = 71/102 (69%), Gaps = 3/102 (2%) Frame = +1 Query: 16 SSAATAVAPFQGLKSTAGLPVSRLSGNAAG---LGSVSNGGRIRCMQVWPIEGIKKFETL 186 + AAT V+ F GLKSTA P S NAA + SNGGR+RCMQVWP G KFETL Sbjct: 7 AGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETL 66 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 SYLP L+ E L+K+V+YL+R+KWVPCLEF G I R++N S Sbjct: 67 SYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRS 108
>RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 178 Score = 113 bits (282), Expect = 1e-25 Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 1/103 (0%) Frame = +1 Query: 7 TVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETL 186 TV + A VAPF GLKS AG P + + + + S NGGR++CMQVWP G KKFETL Sbjct: 13 TVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIAS--NGGRVQCMQVWPPIGKKKFETL 70 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 SYLP L L K+V+YL+R W+PCLEF + GF++REHN S Sbjct: 71 SYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRS 113
>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A/3C) Length = 180 Score = 112 bits (281), Expect = 2e-25 Identities = 62/115 (53%), Positives = 78/115 (67%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +VMSSAA A VAPF GLKSTA PVSR N SNGGR+ CMQV Sbjct: 2 ASSVMSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQ-NLDITSIASNGGRVSCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE++ S Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKS 115
>RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 112 bits (281), Expect = 2e-25 Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G KKFETLSYLP L Sbjct: 18 ATMVAPFTGLKSSAAFPVTRKT-NTDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDL 76 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 S L K+VDYL+R+KW+PC+EF + GF++REH ++ Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGST 113
>RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 112 bits (281), Expect = 2e-25 Identities = 59/106 (55%), Positives = 76/106 (71%), Gaps = 2/106 (1%) Frame = +1 Query: 1 APTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 A V S A AT VAPF GLKS++ PV+R + N VSNGGR+ CM+VWP G KKF Sbjct: 9 AAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDI-TSIVSNGGRVSCMKVWPPVGKKKF 67 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 ETLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH ++ Sbjct: 68 ETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGST 113
>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) Length = 180 Score = 112 bits (280), Expect = 2e-25 Identities = 62/115 (53%), Positives = 77/115 (66%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +V+SSAA A VAPF GLKS A PVSR N SNGGR++CMQV Sbjct: 2 ASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVQCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP KK+ETLSYLP LS E LL +++YL++S WVPCLEF ++ GF++REH+ S Sbjct: 61 WPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHS 115
>RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chain F1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit F1) Length = 181 Score = 112 bits (280), Expect = 2e-25 Identities = 59/106 (55%), Positives = 75/106 (70%), Gaps = 2/106 (1%) Frame = +1 Query: 1 APTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 A V S A AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G KKF Sbjct: 9 AAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDI-TSIASNGGRVSCMKVWPPVGKKKF 67 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 ETLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH ++ Sbjct: 68 ETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGST 113
>RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small chain 1B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1B) Length = 181 Score = 112 bits (280), Expect = 2e-25 Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Frame = +1 Query: 1 APTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 A V S A AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G KKF Sbjct: 9 AAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDI-TSITSNGGRVSCMKVWPPIGKKKF 67 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREH 303 ETLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH Sbjct: 68 ETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREH 110
>RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 182 Score = 112 bits (280), Expect = 2e-25 Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 6/107 (5%) Frame = +1 Query: 1 APTVMSSAATA-----VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEG 165 A T M++A T VAPF GLKS + PV+R + + + S NGGR++CM VWP G Sbjct: 9 AATTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDITSVAS--NGGRVQCM-VWPPLG 65 Query: 166 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREH 303 +KKFETLSYLPPLS E+LLK+V YL+ + WVPCLEF GF++REH Sbjct: 66 MKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREH 112
>RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 181 Score = 112 bits (279), Expect = 3e-25 Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Frame = +1 Query: 1 APTVMSSA-ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 A V S A AT VAPF GLKS+A PV+R + N SNGGR+ CM+VWP G KKF Sbjct: 9 AAVVTSPAQATMVAPFTGLKSSAAFPVTRKT-NKDITSIASNGGRVSCMKVWPPIGKKKF 67 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREH 303 ETLSYLP LS L K+VDYL+R+KW+PC+EF + GF++REH Sbjct: 68 ETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREH 110
>RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 112 bits (279), Expect = 3e-25 Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 1/103 (0%) Frame = +1 Query: 7 TVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETL 186 TV + A VAPF GLKS AG P + + + A + S NGGR++CMQVWP G KKFETL Sbjct: 13 TVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIAS--NGGRVQCMQVWPTTGKKKFETL 70 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 SYLP L L K+V+YL+R W+PCLEF + GF++RE++ S Sbjct: 71 SYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRS 113
>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 181 Score = 111 bits (278), Expect = 4e-25 Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 1/103 (0%) Frame = +1 Query: 7 TVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETL 186 T ++ A + +APF GLKS A PVSR N SNGGR+RCMQVWP +KK+ETL Sbjct: 15 TNVTQAGSMIAPFTGLKSAATFPVSRKQ-NLDITSIASNGGRVRCMQVWPPINMKKYETL 73 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 SYLP L+ E LLK+V+YL+++ WVPCLEF ++ GF++RE++ S Sbjct: 74 SYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKS 116
>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 111 bits (278), Expect = 4e-25 Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A PF GLKS+AG PV++ + + + SNG R+ CMQVWP G KKFETLSYLPPL Sbjct: 19 ANLATPFTGLKSSAGFPVTKKNNDITSI--TSNGSRVNCMQVWPPVGKKKFETLSYLPPL 76 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 + E LLK+V+YL+R WVPC+EF + GF+ R++N+S Sbjct: 77 TDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSS 113
>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (TSSU3-8) Length = 180 Score = 111 bits (277), Expect = 5e-25 Identities = 62/115 (53%), Positives = 77/115 (66%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +V+SSAA A VAPF GLKS A PVSR N SNGGR++CMQV Sbjct: 2 ASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVQCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP KK+ETLSYLP LS E LL +V+YL+++ WVPCLEF ++ GF++RE+N S Sbjct: 61 WPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKS 115
>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 111 bits (277), Expect = 5e-25 Identities = 62/115 (53%), Positives = 77/115 (66%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +V+SSAA A VAPF GLKS A PVSR N SNGGR++CMQV Sbjct: 2 ASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQ-NLDITSIASNGGRVQCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP KK+ETLSYLP LS E LL +V+YL+++ WVPCLEF ++ GF++RE+N S Sbjct: 61 WPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKS 115
>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 180 Score = 110 bits (276), Expect = 7e-25 Identities = 60/115 (52%), Positives = 78/115 (67%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +++SSAA A VAPF GLKSTA PVSR N SNGGR+ CMQV Sbjct: 2 ASSIVSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQ-NLDITSIASNGGRVSCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE++ S Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKS 115
>RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 110 bits (275), Expect = 9e-25 Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 1/99 (1%) Frame = +1 Query: 10 VMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLS 189 V + AT VAPF GLKST P +R + N+ SNGG+++CM+VWP G+KKFETLS Sbjct: 17 VSPAQATMVAPFTGLKSTPVFPTTRKT-NSDITSITSNGGKVQCMKVWPTLGMKKFETLS 75 Query: 190 YLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREH 303 YLPPL+ E L +V+YL+RS W+PCLEF + G ++REH Sbjct: 76 YLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREH 114
>RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 110 bits (275), Expect = 9e-25 Identities = 54/97 (55%), Positives = 71/97 (73%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A VAPF GLKS A P ++ + + + L S NGGR++CM+VWP G+KK+ETLSYLPPL Sbjct: 19 ANMVAPFTGLKSNAAFPTTKKANDFSTLPS--NGGRVQCMKVWPPLGLKKYETLSYLPPL 76 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 + L K+VDYL+R KWVPCLEF + GF++RE+ S Sbjct: 77 TETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARS 113
>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU8) Length = 180 Score = 109 bits (273), Expect = 2e-24 Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +V+SSAA A VAPF GLKS PVS N SNGGR++CMQV Sbjct: 2 ASSVISSAAVATRTNVAQASMVAPFNGLKSAVSFPVSSKQ-NLDITSIASNGGRVQCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP G KK+ETLSYLP L+ E LLK+++YL+ WVPCLEF ++ GF++RE++AS Sbjct: 61 WPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHAS 115
>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 184 Score = 109 bits (273), Expect = 2e-24 Identities = 60/119 (50%), Positives = 76/119 (63%), Gaps = 15/119 (12%) Frame = +1 Query: 1 APTVMSSAATAVA--------------PFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIR 138 A ++MS+AATAVA PF GLKS A PV+R S + + S NGGR++ Sbjct: 2 ASSMMSNAATAVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSNDITSIAS--NGGRVQ 59 Query: 139 CMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 CMQVWP G KKFETLSYLPPLS LL QV YL+ W+PC+EF + F++RE++ S Sbjct: 60 CMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRS 118
>RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 177 Score = 109 bits (272), Expect = 2e-24 Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 2/101 (1%) Frame = +1 Query: 16 SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 195 ++ A VAPF GLKST+ PVSR S N +NGGR+ CMQVWP +KKFETLSYL Sbjct: 16 AAQANMVAPFSGLKSTSAFPVSRKS-NVDITSLATNGGRVNCMQVWPPRNLKKFETLSYL 74 Query: 196 PPLSTEALLKQVDYLIRSKWVPCLEFSKVG--FIFREHNAS 312 P LS E+LLK+++YL+ WVPCLEF +VG ++RE+N S Sbjct: 75 PTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYRENNKS 114
>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 180 Score = 109 bits (272), Expect = 2e-24 Identities = 59/116 (50%), Positives = 76/116 (65%), Gaps = 12/116 (10%) Frame = +1 Query: 1 APTVMSSAATAV-----------APFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQ 147 A ++MS+A TAV APF GLKS A PV+R S + + S NGGR++CMQ Sbjct: 2 ASSLMSNAITAVVGASGAQANMVAPFNGLKSIASFPVTRKSNDITSIAS--NGGRVQCMQ 59 Query: 148 VWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 VWP G KKFETLSYLPPLS LL QV YL+ + W+PC+EF + F++RE++ S Sbjct: 60 VWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRS 115
>RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 108 bits (271), Expect = 3e-24 Identities = 54/96 (56%), Positives = 69/96 (71%), Gaps = 1/96 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A VAPF GLKS + PV+R + N SNGGR++CMQVWP G KKFETLSYLP L Sbjct: 22 ANMVAPFTGLKSASAFPVTRKANNDI-TSLASNGGRVQCMQVWPPLGKKKFETLSYLPDL 80 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNA 309 + L K+VDYL+RSKW+PCLEF + GF+ R++++ Sbjct: 81 TPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSS 116
>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) (LESS 5) Length = 180 Score = 108 bits (270), Expect = 3e-24 Identities = 59/115 (51%), Positives = 78/115 (67%), Gaps = 11/115 (9%) Frame = +1 Query: 1 APTVMSSAATA----------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQV 150 A +V+SSAA A VAPF GLKS+A PV++ N SNGGR+ CMQV Sbjct: 2 ASSVISSAAVATRSNVTQASMVAPFTGLKSSATFPVTKKQ-NLDITSIASNGGRVSCMQV 60 Query: 151 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 WP +KK+ETLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE+N S Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKS 115
>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit S41) Length = 181 Score = 108 bits (270), Expect = 3e-24 Identities = 54/100 (54%), Positives = 72/100 (72%), Gaps = 1/100 (1%) Frame = +1 Query: 16 SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 195 ++ A+ +APF GLKS PVSR N SNGGR++CMQVWP KK+ETLSYL Sbjct: 18 AAQASMIAPFTGLKSATSFPVSRKQ-NLDITSIASNGGRVQCMQVWPPINKKKYETLSYL 76 Query: 196 PPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 P LS E LL++V+YL+++ WVPCLEF ++ GF++RE+N S Sbjct: 77 PDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKS 116
>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 106 bits (265), Expect = 1e-23 Identities = 56/117 (47%), Positives = 77/117 (65%), Gaps = 13/117 (11%) Frame = +1 Query: 1 APTVMSSAATA------------VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCM 144 A +++SSAA A VAPF GLKS+AG P++R N SN G+++CM Sbjct: 2 ASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITR-KNNVDITTLASNAGKVQCM 60 Query: 145 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 +VWP G++KFETLSYLP +S E L K+ DYL+R+ WVPC+EF GF++RE++ S Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRS 117
>RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) Length = 173 Score = 105 bits (262), Expect = 3e-23 Identities = 55/106 (51%), Positives = 75/106 (70%), Gaps = 3/106 (2%) Frame = +1 Query: 4 PTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 P +++ A A VAPF GLKS A PV++ + + L S NGGR++CM+VWP G K++ Sbjct: 5 PATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLAS--NGGRVQCMKVWPPLGKKRY 62 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 ETLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ S Sbjct: 63 ETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARS 108
>RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 173 Score = 105 bits (262), Expect = 3e-23 Identities = 55/106 (51%), Positives = 75/106 (70%), Gaps = 3/106 (2%) Frame = +1 Query: 4 PTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 P +++ A A VAPF GLKS A PV++ + + L S NGGR++CM+VWP G K++ Sbjct: 5 PATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPS--NGGRVQCMKVWPPLGKKRY 62 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 ETLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ S Sbjct: 63 ETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARS 108
>RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 105 bits (262), Expect = 3e-23 Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A VAPF GLKS A P ++ + + + L S NGGR++CM+VWP G KK+ETLSYLP L Sbjct: 19 ANMVAPFTGLKSNAAFPATKKANDFSTLPS--NGGRVQCMKVWPPLGKKKYETLSYLPNL 76 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 + L K+VDYL+R+KWVPCLEF + GF++RE+ S Sbjct: 77 TEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARS 113
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 173 Score = 105 bits (261), Expect = 4e-23 Identities = 55/106 (51%), Positives = 75/106 (70%), Gaps = 3/106 (2%) Frame = +1 Query: 4 PTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 P +++ A A VAPF GLK+ A PV++ + + L S NGGR++CM+VWP G KK+ Sbjct: 5 PATVATVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPS--NGGRVQCMKVWPPLGKKKY 62 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 ETLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ S Sbjct: 63 ETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARS 108
>RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 173 Score = 104 bits (260), Expect = 5e-23 Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%) Frame = +1 Query: 34 VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTE 213 VAPF GLK+ A PV++ + L S NGGR++CM+VWP G KK+ETLSYLP L+ Sbjct: 17 VAPFTGLKANAAFPVTKKVNGFSTLPS--NGGRVQCMKVWPPVGKKKYETLSYLPELTEA 74 Query: 214 ALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 L K+VDYL+R+KWVPCLEF + GF++RE+ +S Sbjct: 75 QLAKEVDYLLRNKWVPCLEFELEHGFVYRENASS 108
>RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 173 Score = 104 bits (260), Expect = 5e-23 Identities = 55/106 (51%), Positives = 75/106 (70%), Gaps = 3/106 (2%) Frame = +1 Query: 4 PTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 P +++ A A VAPF GLKS A PV++ + + L S NGGR++CM+VWP G K++ Sbjct: 5 PATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPS--NGGRVQCMKVWPPLGKKRY 62 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 ETLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ S Sbjct: 63 ETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARS 108
>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 104 bits (260), Expect = 5e-23 Identities = 53/98 (54%), Positives = 71/98 (72%), Gaps = 2/98 (2%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVWPIEGIKKFETLSYLPP 201 A+ VAPF GLKST+ P +R + + S+ SNGGR++CMQVWP G K +ETLSYLPP Sbjct: 22 ASMVAPFTGLKSTSAFPTTRKT--TTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPP 79 Query: 202 LSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 L+ E L K+V+YL+R WVPCLEF + G ++RE++ S Sbjct: 80 LTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRS 117
>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 183 Score = 104 bits (260), Expect = 5e-23 Identities = 53/97 (54%), Positives = 67/97 (69%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A+ VAPF GLKS A P+++ S N SNGGR++CMQVWP G KKFETLSYLPPL Sbjct: 22 ASMVAPFNGLKSFATFPITKKSSNDFS-SLPSNGGRVQCMQVWPPVGKKKFETLSYLPPL 80 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 S LL QV YL+ W+PC+EF + F++RE++ S Sbjct: 81 SDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRS 117
>RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 178 Score = 102 bits (255), Expect = 2e-22 Identities = 51/97 (52%), Positives = 69/97 (71%), Gaps = 1/97 (1%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPL 204 A VAPF GLKS P ++ + + + L S NGGR++CM+VWP G K++ETLSYLP L Sbjct: 19 ANMVAPFTGLKSNVAFPATKKANDFSTLPS--NGGRVQCMKVWPPLGKKRYETLSYLPNL 76 Query: 205 STEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 + L K+VDYL+R+KWVPCLEF + GF++RE+ S Sbjct: 77 TEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARS 113
>RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 173 Score = 102 bits (255), Expect = 2e-22 Identities = 54/106 (50%), Positives = 74/106 (69%), Gaps = 3/106 (2%) Frame = +1 Query: 4 PTVMSSAATA--VAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 177 P +++ A A VAPF GLK+ A PV++ + + L S NGGR++CM+VWP G KK+ Sbjct: 5 PATVAAVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPS--NGGRVQCMKVWPPLGKKKY 62 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 TLSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ S Sbjct: 63 XTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARS 108
>RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 187 Score = 102 bits (253), Expect = 3e-22 Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 2/101 (1%) Frame = +1 Query: 16 SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVWPIEGIKKFETLSY 192 ++ A+ +A F GLKS A PV+R + S+ SNGGR+ CM VWP KK+ETLSY Sbjct: 17 AAQASMIASFNGLKSAASFPVTRKQD--LDITSIASNGGRVECMLVWPPINKKKYETLSY 74 Query: 193 LPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNAS 312 LP LS E LLK+++YL++ WVPCLEF ++ GF++REH+ S Sbjct: 75 LPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRS 115
>RBS_LARLA (P16031) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 99.4 bits (246), Expect = 2e-21 Identities = 51/99 (51%), Positives = 65/99 (65%), Gaps = 3/99 (3%) Frame = +1 Query: 25 ATAVAPFQGLKSTAGLPVSRLSGNAAG---LGSVSNGGRIRCMQVWPIEGIKKFETLSYL 195 + V+ F GLKS A P S+ NA + SNG R+RCMQVWP KKFETLSYL Sbjct: 26 SNVVSAFTGLKSMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPPYANKKFETLSYL 85 Query: 196 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 P L+ E L+K+V+YL+++KWVPCLEF + G I R + S Sbjct: 86 PRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGNS 124
>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1) (Fragment) Length = 136 Score = 94.7 bits (234), Expect = 5e-20 Identities = 43/66 (65%), Positives = 53/66 (80%), Gaps = 1/66 (1%) Frame = +1 Query: 118 SNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIF 294 SNG R++CMQVWP G KKFETLSYLPPL+ + LLK+V+YL+R WVPCLEF + GF++ Sbjct: 6 SNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVY 65 Query: 295 REHNAS 312 EHN S Sbjct: 66 GEHNKS 71
>RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512| (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 Score = 88.6 bits (218), Expect = 4e-18 Identities = 41/42 (97%), Positives = 42/42 (100%) Frame = +1 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 312 +YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS Sbjct: 1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNAS 42
>RBS_MARPA (O64416) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 84.0 bits (206), Expect = 9e-17 Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 1/96 (1%) Frame = +1 Query: 16 SSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSV-SNGGRIRCMQVWPIEGIKKFETLSY 192 +SAA+ Q + AGL G + +NG R+ CMQVW KFETLSY Sbjct: 16 ASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSY 75 Query: 193 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFRE 300 LPPLS +AL KQ+DY+I+S W PC+EF G + RE Sbjct: 76 LPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTRE 111
>RBS1_SPIOL (P00870) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 123 Score = 78.6 bits (192), Expect = 4e-15 Identities = 37/58 (63%), Positives = 46/58 (79%), Gaps = 1/58 (1%) Frame = +1 Query: 142 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNAS 312 MQVWP G+KKFETLSYLPPL+TE LL +V+YL+ W+P LEF K GF++REH+ S Sbjct: 1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKS 58
>RBS5_ACECL (P16133) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 184 Score = 63.9 bits (154), Expect = 1e-10 Identities = 33/83 (39%), Positives = 46/83 (55%) Frame = +1 Query: 28 TAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLS 207 T V G ++ +P +++ N G S + R M VW K FET SYLPPL+ Sbjct: 9 TIVVSKDGCARSSSIP--KVATNKMGFASAVAMKKSREMMVWQPFNNKMFETFSYLPPLT 66 Query: 208 TEALLKQVDYLIRSKWVPCLEFS 276 E + KQVDY++ + W PCLEF+ Sbjct: 67 DEQISKQVDYILANSWTPCLEFA 89
>RBS_BATOE (P26985) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 63.2 bits (152), Expect = 2e-10 Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%) Frame = +1 Query: 115 VSNG--GRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 +SNG + R M VW K FET SYLPPL+ + + KQVDY++R+ W PCLEF+ Sbjct: 25 LSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFA 80
>RBS3_ACECL (P16131) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 62.8 bits (151), Expect = 2e-10 Identities = 30/65 (46%), Positives = 39/65 (60%) Frame = +1 Query: 82 RLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVP 261 R + N G S + + R M VW K FET SYLPPL+ E + KQVDY++ + W P Sbjct: 24 RATKNNKGFASNAAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTP 83 Query: 262 CLEFS 276 CLEF+ Sbjct: 84 CLEFA 88
>RBS6_ACECL (Q38692) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) (rbcS4) Length = 182 Score = 60.5 bits (145), Expect = 1e-09 Identities = 38/92 (41%), Positives = 49/92 (53%) Frame = +1 Query: 1 APTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFE 180 A T+MS T ++ Q K A VS G ++ N R M VW K FE Sbjct: 2 AATMMSK--TIISSKQCSKPIAPPKVSINKGFVNTSAAIKN----REMMVWQPFNNKMFE 55 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 T SYLPPL+ E + KQVDY++ + W PCLEF+ Sbjct: 56 TFSYLPPLTDEQISKQVDYILANAWTPCLEFA 87
>RBS7_ACECL (Q38693) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) (rbcS1) Length = 183 Score = 60.5 bits (145), Expect = 1e-09 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 8/72 (11%) Frame = +1 Query: 85 LSGNAAGLGSVSNGGRI--------RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYL 240 + G A ++S GG + R M VW K FET SYLPPL+ E + KQVDY+ Sbjct: 17 VKGGVAPKVAMSRGGFLNSGIMKKDRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYI 76 Query: 241 IRSKWVPCLEFS 276 + + W PCLEF+ Sbjct: 77 LANSWTPCLEFA 88
>RBS5_ACEME (P16138) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 183 Score = 60.1 bits (144), Expect = 1e-09 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%) Frame = +1 Query: 52 LKSTAGLP--VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLK 225 L G P V ++ + G S + R M VW K FET S+LPPL+ E + K Sbjct: 12 LNKQCGKPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISK 71 Query: 226 QVDYLIRSKWVPCLEFS 276 QVDY++ + W PCLEF+ Sbjct: 72 QVDYILANSWTPCLEFA 88
>RBS2_CHLRE (P08475) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 185 Score = 59.7 bits (143), Expect = 2e-09 Identities = 25/46 (54%), Positives = 32/46 (69%) Frame = +1 Query: 142 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 M VW K FET SYLPPLS E + QVDY++ + W+PCLEF++ Sbjct: 46 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAE 91
>RBS4_ACECL (P16132) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 182 Score = 59.3 bits (142), Expect = 2e-09 Identities = 26/47 (55%), Positives = 32/47 (68%) Frame = +1 Query: 136 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 R M VW K FET SYLPPL+ E + KQVDY++ + W PCLEF+ Sbjct: 41 REMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFA 87
>RBS1_CHLRE (P00873) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 185 Score = 58.5 bits (140), Expect = 4e-09 Identities = 24/46 (52%), Positives = 32/46 (69%) Frame = +1 Query: 142 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 M VW K FET SYLPPL+ E + QVDY++ + W+PCLEF++ Sbjct: 46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAE 91
>RBS2_ACEME (P16135) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) (Fragment) Length = 173 Score = 57.8 bits (138), Expect = 7e-09 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +1 Query: 136 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 R M VW K FET S+LPPL+ E + KQVDY++ + W PCLEF+ Sbjct: 32 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFA 78
>RBS4_ACEME (P16137) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 182 Score = 57.8 bits (138), Expect = 7e-09 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +1 Query: 136 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 R M VW K FET S+LPPL+ E + KQVDY++ + W PCLEF+ Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFA 87
>RBS1_ACEME (P16134) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 57.8 bits (138), Expect = 7e-09 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +1 Query: 136 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 R M VW K FET S+LPPL+ E + KQVDY++ + W PCLEF+ Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFA 87
>RBS3_ACEME (P16136) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 182 Score = 57.4 bits (137), Expect = 9e-09 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +1 Query: 136 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 R M VW K FET S+LPPL+ E + KQVDY++ + W PCLEF+ Sbjct: 41 RGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFA 87
>RBS_EUGGR (P16881) Ribulose bisphosphate carboxylase small chains,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunits) [Contains: Ribulose bisphosphate carboxylase small chain P1; Ribulose bisphosphate carboxylase small chain P2; Ribulose bispho Length = 1273 Score = 56.2 bits (134), Expect = 2e-08 Identities = 31/67 (46%), Positives = 40/67 (59%) Frame = +1 Query: 76 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 255 V R SG+++ G + G + M+VW KKFET SYLPPLS + KQVD +I Sbjct: 688 VQRPSGSSSSWGMAAMTGE-KDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 746 Query: 256 VPCLEFS 276 PCLEF+ Sbjct: 747 SPCLEFA 753 Score = 56.2 bits (134), Expect = 2e-08 Identities = 31/67 (46%), Positives = 40/67 (59%) Frame = +1 Query: 76 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 255 V R SG+++ G + G + M+VW KKFET SYLPPLS + KQVD +I Sbjct: 401 VQRPSGSSSSWGMAAMTGE-KDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 459 Query: 256 VPCLEFS 276 PCLEF+ Sbjct: 460 SPCLEFA 466 Score = 53.9 bits (128), Expect = 1e-07 Identities = 31/85 (36%), Positives = 45/85 (52%) Frame = +1 Query: 22 AATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 201 A+ + P GL + L ++ + A + ++ + M+VW KKFET SYLPP Sbjct: 98 ASAILFPLSGLFAAVALKMAMMKPKVAAVLPFTSE---KDMKVWNPVNNKKFETFSYLPP 154 Query: 202 LSTEALLKQVDYLIRSKWVPCLEFS 276 LS + KQVD +I PCLEF+ Sbjct: 155 LSDAQIAKQVDMIIAKGLSPCLEFA 179 Score = 53.1 bits (126), Expect = 2e-07 Identities = 29/67 (43%), Positives = 39/67 (58%) Frame = +1 Query: 76 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 255 V R SG+++ ++ + M+VW KKFET SYLPPLS + KQVD +I Sbjct: 975 VQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 1034 Query: 256 VPCLEFS 276 PCLEF+ Sbjct: 1035 SPCLEFA 1041 Score = 53.1 bits (126), Expect = 2e-07 Identities = 29/67 (43%), Positives = 39/67 (58%) Frame = +1 Query: 76 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 255 V R SG+++ ++ + M+VW KKFET SYLPPLS + KQVD +I Sbjct: 544 VQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 603 Query: 256 VPCLEFS 276 PCLEF+ Sbjct: 604 SPCLEFA 610 Score = 53.1 bits (126), Expect = 2e-07 Identities = 29/67 (43%), Positives = 39/67 (58%) Frame = +1 Query: 76 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 255 V R SG+++ ++ + M+VW KKFET SYLPPLS + KQVD +I Sbjct: 257 VQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 316 Query: 256 VPCLEFS 276 PCLEF+ Sbjct: 317 SPCLEFA 323 Score = 52.8 bits (125), Expect = 2e-07 Identities = 29/67 (43%), Positives = 39/67 (58%) Frame = +1 Query: 76 VSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 255 V R SG+++ ++ + M+VW KKFET SYLPPLS + KQVD +I Sbjct: 1119 VQRPSGSSSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGL 1178 Query: 256 VPCLEFS 276 PCLEF+ Sbjct: 1179 SPCLEFA 1185 Score = 52.0 bits (123), Expect = 4e-07 Identities = 32/89 (35%), Positives = 45/89 (50%) Frame = +1 Query: 10 VMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLS 189 V +A +V Q + P S ++ G+ +++ M+VW KKFET S Sbjct: 813 VRLAAFDSVKQVQVISFVVQRPSGSSSSSSWGMAAMTGEKE---MKVWNPVNNKKFETFS 869 Query: 190 YLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 YLPPLS + KQVD +I PCLEF+ Sbjct: 870 YLPPLSDAQIAKQVDMIIAKGLSPCLEFA 898
>RBS_CHLMO (P17537) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 55.1 bits (131), Expect = 4e-08 Identities = 22/44 (50%), Positives = 32/44 (72%) Frame = +1 Query: 145 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 +VW K++ET SYLPPL+ + + +QVDY+I + W PCLEF+ Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFA 73
>RBS_PROHO (P27569) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 109 Score = 47.8 bits (112), Expect = 7e-06 Identities = 16/37 (43%), Positives = 31/37 (83%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 +++ETLSYLPPLS + + +Q++Y++R ++P +EF++ Sbjct: 8 RRYETLSYLPPLSDQQIARQIEYMVREGYIPAVEFNE 44
>RBS1_ACECL (P16129) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) (Fragment) Length = 126 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/30 (60%), Positives = 24/30 (80%) Frame = +1 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 SYLPPL+ E + KQVDY++ + W PCLEF+ Sbjct: 2 SYLPPLTDEQISKQVDYILANSWTPCLEFA 31
>RBS_SYNP2 (Q44178) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 111 Score = 45.4 bits (106), Expect = 4e-05 Identities = 18/37 (48%), Positives = 28/37 (75%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 K++ETLSYLPPLS + + +QV Y++ ++P +EF K Sbjct: 8 KRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEK 44
>RBS_ANASP (P06514) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 109 Score = 45.4 bits (106), Expect = 4e-05 Identities = 21/47 (44%), Positives = 33/47 (70%) Frame = +1 Query: 142 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV 282 MQ P E +++ETLSYLPPL+ + KQV Y++ ++P +EF++V Sbjct: 1 MQTLPKE--RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEV 45
>RBS_PSEHY (Q51857) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 124 Score = 43.1 bits (100), Expect = 2e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 270 K+FET SYLP +S E + KQ++Y++ W P +E Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE 57
>RBS_ALVHS (P24682) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 121 Score = 42.7 bits (99), Expect = 2e-04 Identities = 17/37 (45%), Positives = 25/37 (67%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 +KFET SYLP L E + KQV+Y++ W P +E ++ Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAVEHTE 53
>RBS_CYAPA (P18062) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 106 Score = 42.7 bits (99), Expect = 2e-04 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVG 285 +KFET SYLPPL+ + + +Q+ Y + + + P +EFS G Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEFSFTG 45
>RBS_SYNY3 (P54206) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 42.4 bits (98), Expect = 3e-04 Identities = 16/37 (43%), Positives = 29/37 (78%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 +++ETLSYLPPL+ + + KQV++L+ ++P +EF + Sbjct: 8 RRYETLSYLPPLTDQQIAKQVEFLLDQGFIPGVEFEE 44
>RBS_SYNP6 (P04716) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 110 Score = 41.2 bits (95), Expect = 7e-04 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 ++FET SYLPPLS + Q++Y+I + P +EF++ Sbjct: 9 RRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNE 45
>RBS_THIDA (Q56260) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 118 Score = 40.8 bits (94), Expect = 9e-04 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 +KFET SYLP ++ + KQV+YL+ W P +E ++ Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIEHTE 53
>RBS1_CHRVI (P22850) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 117 Score = 40.8 bits (94), Expect = 9e-04 Identities = 15/37 (40%), Positives = 25/37 (67%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 +KFET SYLP + + + KQV+Y++ W P +E ++ Sbjct: 16 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAIEHTE 52
>RBS2_THIFE (Q07088) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 118 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/36 (44%), Positives = 25/36 (69%) Frame = +1 Query: 172 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 KFETLSYLP L+ + + +QV Y++ W P +E ++ Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVEHTE 53
>RBS1_HYDMR (Q59459) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 117 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSK 279 +K ET SYLP ++T+ + QV+Y+I W P +E S+ Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIEHSE 53
>RBS_NITVU (Q59614) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 108 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/48 (35%), Positives = 28/48 (58%) Frame = +1 Query: 142 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVG 285 M V +KK+ET SYLP ++ E + +Q+ + I W P +E ++ G Sbjct: 1 MAVQAYRSLKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKG 48
>RBS_THINE (P45686) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 110 Score = 38.9 bits (89), Expect = 0.003 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = +1 Query: 172 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV 282 K+ET SYLPP++ E + Q+ Y I W P +E +V Sbjct: 12 KYETFSYLPPMNAERIRAQIKYAIAQGWSPGIEHVEV 48
>RBS2_CHRVI (P22860) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 113 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = +1 Query: 166 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 270 I ++ET SYLPPL+ E +L+Q+ Y++ + W LE Sbjct: 13 IGRYETFSYLPPLNREEILEQILYILDNGWNASLE 47
>RBS1_THIFE (P28896) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 110 Score = 37.0 bits (84), Expect = 0.013 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +1 Query: 172 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 270 K+ET SYLP + E + +Q+ YLI W P +E Sbjct: 12 KYETFSYLPAMGPEKMRRQIAYLINQGWNPGIE 44
>RBS_RHOCA (O32741) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 118 Score = 36.2 bits (82), Expect = 0.021 Identities = 13/40 (32%), Positives = 26/40 (65%) Frame = +1 Query: 169 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGF 288 +K T SYLPP+ + +QV++++++ W P +E ++ F Sbjct: 17 RKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIEHTEPDF 56
>SYH_BIFLO (Q8G864) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 466 Score = 33.5 bits (75), Expect = 0.14 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -3 Query: 312 RGIVLTEDESNLAELETRHPLGADQVVDLLQECLRGERWQVRQSLELLD 166 RG+ LT+ E L E++ +GAD+V LL E Q R LEL + Sbjct: 184 RGLGLTDVEGVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAE 232
>RBS_SYNPX (P0A4S5) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 32.3 bits (72), Expect = 0.31 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 166 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 270 + ET +LPP++ + + Q+ Y+I W P +E Sbjct: 13 VATLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE 47
>RBS_SYNPW (P0A4S6) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 32.3 bits (72), Expect = 0.31 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 166 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 270 + ET +LPP++ + + Q+ Y+I W P +E Sbjct: 13 VATLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE 47
>RBS2_HYDMR (Q59461) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 122 Score = 32.3 bits (72), Expect = 0.31 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 178 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 270 ET S+LP + + + Q+ Y+I W P LE Sbjct: 15 ETFSFLPEFTADEIYDQIVYIINQGWTPALE 45
>RBSC_RALEU (P09658) Ribulose bisphosphate carboxylase small chain, chromosomal| (EC 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 31.2 bits (69), Expect = 0.69 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 T S+LP L+ E + KQ++Y + W LE++ Sbjct: 7 TFSFLPELTDEQITKQLEYCLNQGWAVGLEYT 38
>RBS_PORAE (Q09125) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 31.2 bits (69), Expect = 0.69 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 T S+LP L+ + KQV Y + KW +E++ Sbjct: 7 TFSFLPDLTDAQIQKQVQYAVSKKWAVSVEYT 38
>RBS_GALSU (P23756) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 31.2 bits (69), Expect = 0.69 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 T S+LP L+ E + KQ+DY+I K +E++ Sbjct: 7 TFSFLPDLTDEQIKKQIDYMISKKLAIGIEYT 38
>RBS_CYAME (O22024) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 30.8 bits (68), Expect = 0.90 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 T YLP L+ E + KQ+ Y I W +E++ Sbjct: 7 TFCYLPDLTDEQIRKQIQYAINQGWAVSVEYT 38
>RBS_ANTSP (P25458) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 30.8 bits (68), Expect = 0.90 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 T S+LP L+ E + KQ+ Y + W +EF+ Sbjct: 7 TFSFLPDLTDEQIKKQIAYAVSQNWAINIEFT 38
>RBS_CYACA (P37394) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +1 Query: 181 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 T S+LP L+ + + KQ+ Y I W +E++ Sbjct: 7 TFSFLPDLTNDQIRKQIQYAINKGWALSVEYT 38
>TOP2B_CHICK (O42131) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1627 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +1 Query: 85 LSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLS-TEALLKQVDYLIRSKWVP 261 L+G+ G+ + NG ++ P+ G + + L L T LK + ++ +W Sbjct: 272 LAGSCKGVKVMLNGKKL------PVNGFRSYVDLYVKDKLDETGVALKVIHEVVNERWDV 325 Query: 262 CLEFSKVGF 288 CL S+ GF Sbjct: 326 CLTLSEKGF 334
>NAS35_CAEEL (P98060) Zinc metalloproteinase nas-35 precursor (EC 3.4.24.21)| (Nematode astacin 35) (Dumpy protein 31) (Tollish protein 2) Length = 592 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -3 Query: 303 VLTEDESNLAELETRHPLGADQVVDLLQECLR 208 ++ D A RHPLG +Q+V L EC+R Sbjct: 185 IVFTDVDGCASNVGRHPLGEEQLVSLAPECIR 216
>TOP2B_HUMAN (Q02880) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1626 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +1 Query: 85 LSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLS-TEALLKQVDYLIRSKWVP 261 L+G+ G+ + NG ++ P+ G + + L L T LK + L +W Sbjct: 267 LAGSCRGVKVMFNGKKL------PVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDV 320 Query: 262 CLEFSKVGF 288 CL S+ GF Sbjct: 321 CLTLSEKGF 329
>TOP2B_MOUSE (Q64511) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1612 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +1 Query: 85 LSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLS-TEALLKQVDYLIRSKWVP 261 L+G+ G+ + NG ++ P+ G + + L L T LK + L +W Sbjct: 255 LAGSCKGVKVMFNGKKL------PVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDV 308 Query: 262 CLEFSKVGF 288 CL S+ GF Sbjct: 309 CLTLSEKGF 317
>TOP2B_CRILO (Q64399) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1612 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +1 Query: 85 LSGNAAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLS-TEALLKQVDYLIRSKWVP 261 L+G+ G+ + NG ++ P+ G + + L L T LK + L +W Sbjct: 255 LAGSCKGVKVMFNGKKL------PVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDV 308 Query: 262 CLEFSKVGF 288 CL S+ GF Sbjct: 309 CLTLSEKGF 317
>RBS_GUITH (P14960) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 S+LP L+ E ++KQ+ Y I W +E++ Sbjct: 9 SFLPDLTDEQIVKQIQYAISKNWALNVEWT 38
>RBS_OLILU (P14961) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 SYLP L+ ++KQ+DY + W +E++ Sbjct: 9 SYLPDLTDAQIIKQIDYCLSRGWSVGVEWT 38
>RBS_BRAJA (Q9ZI33) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 134 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 S+LP L+ + + KQV Y + W +EF+ Sbjct: 9 SFLPDLTDDQIYKQVQYCLAKGWAVNIEFT 38
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Frame = +1 Query: 4 PTVMSSAATAVAPFQGLKSTAGLPVSRLSG-----NAAGLGSVSNGGRIRCMQ 147 P SS + P G S+ G P + + A+G + +NGG + C+Q Sbjct: 270 PATSSSLPSPATPSHGSPSSHGPPATHPTSPTPPSTASGATTAANGGSLNCLQ 322
>RBS_CYLSN (P24683) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS 276 S+LP L+ E + KQV+Y I W +E++ Sbjct: 9 SFLPDLTDEQIEKQVNYAISKGWAMNVEWT 38
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Frame = +1 Query: 4 PTVMSSAATAVAPFQGLKSTAGLPVSRLSG-----NAAGLGSVSNGGRIRCMQ 147 P SS + P G S+ G P + + AAG + +NGG C+Q Sbjct: 270 PATSSSLPSPATPSHGSPSSHGPPATHPTSPTPPSTAAGTTTATNGGTSNCLQ 322
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +1 Query: 13 MSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRI 135 +S T A Q S GLP S+LSG G GS + R+ Sbjct: 2457 LSRGQTPFAGTQDKSSLVGLPPSKLSGPILGPGSFPSDDRL 2497
>HHEX_CHICK (Q05502) Homeobox protein PRH (Hematopoietically expressed| homeobox) Length = 277 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +1 Query: 124 GGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLK 225 GG++R IE KKFET YL P + L K Sbjct: 146 GGQVRFSNEQTIELEKKFETQKYLSPPERKRLAK 179
>HHEX_HUMAN (Q03014) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 270 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +1 Query: 124 GGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQV 231 GG++R IE KKFET YL P + L K + Sbjct: 139 GGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKML 174
>IL5_SHEEP (Q28586) Interleukin-5 precursor (IL-5) (T-cell replacing factor)| (TRF) (Eosinophil differentiation factor) Length = 132 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 240 QVVDLLQECLRGERWQVRQSLELLDAF 160 + +DL + GERW+V+Q L+ L F Sbjct: 94 EYIDLQKRKCGGERWRVKQFLDYLQVF 120
>HHEX_MOUSE (P43120) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 271 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 124 GGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQV 231 GG++R +E KKFET YL P + L K + Sbjct: 140 GGQVRFSNDQTVELEKKFETQKYLSPPERKRLAKML 175
>IL5_BOVIN (P52173) Interleukin-5 precursor (IL-5) (T-cell replacing factor)| (TRF) (Eosinophil differentiation factor) Length = 134 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 240 QVVDLLQECLRGERWQVRQSLELLDAF 160 + +DL + GERW+V+Q L+ L F Sbjct: 96 EYIDLQKRKCGGERWRVKQFLDYLQVF 122
>YAED_SCHPO (Q09853) Hypothetical protein C23D3.13c in chromosome I| Length = 1616 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +1 Query: 58 STAGLPVSRLSGNA--AGLGSVSNGGRIRCMQVWPIEGIKKFET 183 S +P + LSGN + S+S+ GR+ ++ +EG+K+ T Sbjct: 548 SNKAVPSNLLSGNMTHSASSSISHNGRLSTSTMFSVEGLKEAAT 591
>RBS1_RHOSH (P27998) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 129 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 187 SYLPPLSTEALLKQVDYLIRSKWVPCLE 270 S+LP L+ E + QVDY + W LE Sbjct: 9 SFLPDLTDEQISAQVDYCLGRGWAVSLE 36
>YKU5_SCHPO (Q9P7C0) WD-repeat protein C2E1P5.05 in chromosome I| Length = 524 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +1 Query: 52 LKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPI-EGIKKFETLSYLPPLSTEALLKQ 228 + S A +P S L + + G++ ++W I EG++ FE L+ PLS + Sbjct: 414 ITSLAAIPYSNLFASGSWDGNI---------RLWKIAEGLRSFEPLTIATPLSVYGCINS 464 Query: 229 VDYLIRSK 252 + ++ K Sbjct: 465 LSLSLQGK 472
>YJIB_BACSU (O34374) Putative cytochrome P450 yjiB (EC 1.14.-.-)| Length = 396 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Frame = +1 Query: 49 GLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIE-----GIKKF 177 G+ G P++RL N A +S + C+ + PIE G+K F Sbjct: 345 GIHFCLGAPLARLEANIALTSLISAFPHMECVSITPIENSVIYGLKSF 392 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,108,563 Number of Sequences: 219361 Number of extensions: 647836 Number of successful extensions: 2603 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 2445 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2517 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
