ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4l12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017005.1| Zea mays clone EK07D2310A10.c mRNA sequence Length = 1053 Score = 595 bits (300), Expect = e-167 Identities = 419/459 (91%) Strand = Plus / Plus Query: 27 cttgntatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagcttgag 86 |||| |||||||||||||||||| || ||| | |||||||||||| |||||||||||| Sbjct: 231 cttgatatgctggagaagaaagaaaaggtgctggagaaaaaagcaaacgctgagcttgag 290 Query: 87 agggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcattgaagagg 146 || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 291 agagccaaggagttctcgaaagcaaagaataaaagagcggctatccaatccttgaagagg 350 Query: 147 aaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgat 206 ||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 351 aaaaaactttatgagcaacaaattgagcagcttggaaattttcagttgagaatccatgat 410 Query: 207 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 266 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 411 cagatgatcatgttagaagcagctaaagctacaacagagactgttgatgcattgagaact 470 Query: 267 ggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgacaagact 326 |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 471 ggagctgcagctatgaaagcaatgcaaaaagcaacaaacattgatgatgtcgacaagacc 530 Query: 327 atggacgaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctgtcagct 386 ||||| |||||||| |||||||| ||||||||||||||||| || |||||| |||||||| Sbjct: 531 atggatgaaattaacgaacagactgaaaacatgaaacaaattcaggatgctttgtcagct 590 Query: 387 cctcttggagcttctgctgattttgacgaggatgaactggaagctgagctggaagagttg 446 ||||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 591 cctcttggagcttttgctgatttcgacgaggatgaactggaagctgaacttgaagaactg 650 Query: 447 gagggagcagagttggaatcccaactactggagcctgtt 485 |||||||||||||||||||| || || || ||||||||| Sbjct: 651 gagggagcagagttggaatctcagcttcttgagcctgtt 689
>ref|XM_506643.1| PREDICTED Oryza sativa (japonica cultivar-group), B1008E06.13 patrial mRNA Length = 1223 Score = 509 bits (257), Expect = e-141 Identities = 404/453 (89%) Strand = Plus / Plus Query: 33 atgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagcttgagagggcc 92 |||||||||||||| |||||||| ||||||||||| |||| || || || |||||||| Sbjct: 327 atgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaactggagagggct 386 Query: 93 aaggagttctcaaaagcaaagaataaaagagcggctatccaatcattgaagaggaaaaaa 152 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 387 aaggagttctcaaaagcaaagaataaaagagcggctatccaatccttgaagagaaaaaag 446 Query: 153 ctttatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatg 212 |||||||| || |||||||||||||| ||||| ||||||||||| || |||||||||||| Sbjct: 447 ctttatgaacaacaaattgagcagctagggaacttccagttgagaattcatgatcagatg 506 Query: 213 atcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactggagct 272 ||||||||||||||||| |||||||||||||| || || ||||| ||||||||||||||| Sbjct: 507 atcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggactggagct 566 Query: 273 aaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgacaagactatggac 332 |||||||||||| |||||||| || |||||||||||||| || || ||||||||||| Sbjct: 567 gcagctatgaaagcaatgcaaaaggcgacaaatattgatgacgttgataagactatggat 626 Query: 333 gaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctgtcagctcctctt 392 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 627 gaaattaatgaacagactgaaaacatgaaacaaatacaagatgctttgtcagcccctctt 686 Query: 393 ggagcttctgctgattttgacgaggatgaactggaagctgagctggaagagttggaggga 452 ||||| |||||||||||||| ||||| ||||| || || || |||||||| |||||||| Sbjct: 687 ggagcatctgctgattttgatgaggacgaactagaggcagaactggaagaactggaggga 746 Query: 453 gcagagttggaatcccaactactggagcctgtt 485 ||||| |||||||| || || || ||||||||| Sbjct: 747 gcagaattggaatctcagcttctcgagcctgtt 779
>dbj|AK065728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036O11, full insert sequence Length = 1223 Score = 509 bits (257), Expect = e-141 Identities = 404/453 (89%) Strand = Plus / Plus Query: 33 atgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagcttgagagggcc 92 |||||||||||||| |||||||| ||||||||||| |||| || || || |||||||| Sbjct: 327 atgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaactggagagggct 386 Query: 93 aaggagttctcaaaagcaaagaataaaagagcggctatccaatcattgaagaggaaaaaa 152 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 387 aaggagttctcaaaagcaaagaataaaagagcggctatccaatccttgaagagaaaaaag 446 Query: 153 ctttatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatg 212 |||||||| || |||||||||||||| ||||| ||||||||||| || |||||||||||| Sbjct: 447 ctttatgaacaacaaattgagcagctagggaacttccagttgagaattcatgatcagatg 506 Query: 213 atcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactggagct 272 ||||||||||||||||| |||||||||||||| || || ||||| ||||||||||||||| Sbjct: 507 atcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggactggagct 566 Query: 273 aaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgacaagactatggac 332 |||||||||||| |||||||| || |||||||||||||| || || ||||||||||| Sbjct: 567 gcagctatgaaagcaatgcaaaaggcgacaaatattgatgacgttgataagactatggat 626 Query: 333 gaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctgtcagctcctctt 392 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 627 gaaattaatgaacagactgaaaacatgaaacaaatacaagatgctttgtcagcccctctt 686 Query: 393 ggagcttctgctgattttgacgaggatgaactggaagctgagctggaagagttggaggga 452 ||||| |||||||||||||| ||||| ||||| || || || |||||||| |||||||| Sbjct: 687 ggagcatctgctgattttgatgaggacgaactagaggcagaactggaagaactggaggga 746 Query: 453 gcagagttggaatcccaactactggagcctgtt 485 ||||| |||||||| || || || ||||||||| Sbjct: 747 gcagaattggaatctcagcttctcgagcctgtt 779
>gb|BT016724.1| Zea mays clone Contig557 mRNA sequence Length = 833 Score = 507 bits (256), Expect = e-140 Identities = 369/407 (90%) Strand = Plus / Plus Query: 24 actcttgntatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagctt 83 ||||||| ||||||||||||||||||||| ||| | || |||||||||| ||||||||| Sbjct: 407 actcttgatatgctggagaagaaagagaaggtgctggacaaaaaagcagccgctgagctt 466 Query: 84 gagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcattgaag 143 ||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 467 gagagagccaaggagttctccaaagctaagaataaaagagcggctatccaatccttgaag 526 Query: 144 aggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggatccat 203 ||||||||||||||||| || |||||||||||||| || ||||| |||||||| || ||| Sbjct: 527 aggaaaaaactttatgaacaacaaattgagcagctcggaaattttcagttgagaattcat 586 Query: 204 gatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgagg 263 ||||||||||||||||||||||| ||||||||||| || |||||||| ||||| ||||| Sbjct: 587 gatcagatgatcatgttagaagcagctaaagctacaacggagactgttgatgcgttgaga 646 Query: 264 actggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgacaag 323 ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 647 actggagctgcagctatgaaagcaatgcaaaaagcaacaaacattgatgatgtcgacaag 706 Query: 324 actatggacgaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctgtca 383 || ||||| ||||||||||||||||| ||||| ||||||||||| ||||||||| || || Sbjct: 707 accatggatgaaattaatgaacagactgaaaatatgaaacaaattcaagatgctttgcca 766 Query: 384 gctcctcttggagcttctgctgattttgacgaggatgaactggaagc 430 || |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 767 actgctcttggagcttatgctgattttgacgaggatgaactggaagc 813
>dbj|AK061983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A12, full insert sequence Length = 918 Score = 502 bits (253), Expect = e-139 Identities = 403/453 (88%) Strand = Plus / Plus Query: 33 atgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagcttgagagggcc 92 |||||||||||||| |||||||| ||||||||||| |||| || || || |||||||| Sbjct: 15 atgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaactggagagggct 74 Query: 93 aaggagttctcaaaagcaaagaataaaagagcggctatccaatcattgaagaggaaaaaa 152 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 75 aaggagttctcaaaagcaaagaataaaagagcggctatccaatccttgaagagaaaaaag 134 Query: 153 ctttatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatg 212 |||||||| || |||||||||||||| ||||| ||||||||||| || |||||||||||| Sbjct: 135 ctttatgaacaacaaattgagcagctagggaacttccagttgagaattcatgatcagatg 194 Query: 213 atcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactggagct 272 ||||||||||||||||| |||||||||||||| || || ||||| ||||||||||||||| Sbjct: 195 atcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggactggagct 254 Query: 273 aaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgacaagactatggac 332 |||||||||||| |||||||| || |||||||||||||| || || ||||||||||| Sbjct: 255 gcagctatgaaagcaatgcaaaaggcgacaaatattgatgacgttgataagactatggat 314 Query: 333 gaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctgtcagctcctctt 392 ||||||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||| Sbjct: 315 gaaattaatgaacagactgaaaacatgaaacaaacacaagatgctttgtcagcccctctt 374 Query: 393 ggagcttctgctgattttgacgaggatgaactggaagctgagctggaagagttggaggga 452 ||||| |||||||||||||| ||||| ||||| || || || |||||||| |||||||| Sbjct: 375 ggagcatctgctgattttgatgaggacgaactagaggcagaactggaagaactggaggga 434 Query: 453 gcagagttggaatcccaactactggagcctgtt 485 ||||| |||||||| || || || ||||||||| Sbjct: 435 gcagaattggaatctcagcttctcgagcctgtt 467
>gb|BT016875.1| Zea mays clone Contig708 mRNA sequence Length = 740 Score = 196 bits (99), Expect = 5e-47 Identities = 144/159 (90%) Strand = Plus / Minus Query: 327 atggacgaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctgtcagct 386 ||||| ||||||||||||||||| ||||| ||||||||||| ||||||||| ||||| || Sbjct: 740 atggatgaaattaatgaacagactgaaaatatgaaacaaattcaagatgctttgtcaact 681 Query: 387 cctcttggagcttctgctgattttgacgaggatgaactggaagctgagctggaagagttg 446 |||||||||||||||||||||||||||||||||||||||||||| || || ||||| || Sbjct: 680 cctcttggagcttctgctgattttgacgaggatgaactggaagcggaacttgaagaactg 621 Query: 447 gagggagcagagttggaatcccaactactggagcctgtt 485 || ||||||||||||||||| || || |||||||||||| Sbjct: 620 gaaggagcagagttggaatctcagcttctggagcctgtt 582
>gb|BT012766.1| Lycopersicon esculentum clone 113715R, mRNA sequence Length = 984 Score = 196 bits (99), Expect = 5e-47 Identities = 300/367 (81%) Strand = Plus / Plus Query: 82 ttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcattga 141 |||||| |||||| || || ||| ||||||||| |||||||| || || || | |||| Sbjct: 197 ttgagaaggccaaagattttacaagagcaaagaacaaaagagctgcaatacagtgtttga 256 Query: 142 agaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggatcc 201 ||||||| | || || || || ||||||||||||||||| ||||||||| | | |||| Sbjct: 257 agaggaagaggctctacgaacaacaaattgagcagcttggcaatttccagcttcgcatcc 316 Query: 202 atgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattga 261 ||||||||||||| ||| |||||| || |||||||| || || ||||| ||||| ||| Sbjct: 317 atgatcagatgataatgctagaaggcgcaaaagctacaactgaaactgttgatgctttgc 376 Query: 262 ggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgaca 321 ||||||||||| || |||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 377 ggactggagcttctgcaatgaaagcaatgcagaaagcaacaaatattgatgatgtagaca 436 Query: 322 agactatggacgaaattaatgaacagacagaaaacatgaaacaaatacaagatgctctgt 381 |||| ||||| ||||| |||||||||||||| || |||||||||||||| || ||| || Sbjct: 437 agacaatggatgaaataaatgaacagacagagaatatgaaacaaatacaggaggctttgg 496 Query: 382 cagctcctcttggagcttctgctgattttgacgaggatgaactggaagctgagctggaag 441 | |||| |||| || | ||||||||||| ||||||||| |||| || || || |||| Sbjct: 497 ctactccaattggtgcagcagctgattttgatgaggatgaattggaggcagaacttgaag 556 Query: 442 agttgga 448 | ||||| Sbjct: 557 aattgga 563
>gb|AY106783.1| Zea mays PCO103251 mRNA sequence Length = 1172 Score = 192 bits (97), Expect = 7e-46 Identities = 271/329 (82%) Strand = Plus / Plus Query: 105 aaagcaaagaataaaagagcggctatccaatcattgaagaggaaaaaactttatgagcag 164 ||||| |||||||||||||| || || || | ||||||||||||| ||| || ||||| Sbjct: 353 aaagccaagaataaaagagctgcaatacagtgcttgaagaggaaaagactatacgagcaa 412 Query: 165 caaattgagcagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaa 224 || |||||||||||||| ||||||||| | ||||| |||||||||||||| ||| | ||| Sbjct: 413 cagattgagcagcttggaaatttccagcttaggatacatgatcagatgattatgctggaa 472 Query: 225 gctgctaaagctacgacagagactgtggatgcattgaggactggagctaaagctatgaaa 284 || || |||||||| |||||||| |||||||||||||| |||||||| ||| |||||| Sbjct: 473 gcagcaaaagctacaacagagaccgtggatgcattgagaactggagcatcagcaatgaaa 532 Query: 285 gcgatgcaaaaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaa 344 || ||||| || ||||||||||||||||||| || || || ||||| ||||||||||| Sbjct: 533 gctatgcataagtcaacaaatattgatgatgttgataaaaccatggatgaaattaatgac 592 Query: 345 cagacagaaaacatgaaacaaatacaagatgctctgtcagctcctcttggagcttctgct 404 | | || ||||||| |||||| || ||| ||||||| ||| | ||||| | ||| Sbjct: 593 aatatggagaacatgagacaaattcaggatctgttgtcagcgcctatgggagcagcagct 652 Query: 405 gattttgacgaggatgaactggaagctga 433 |||||||| ||||||||||| |||||||| Sbjct: 653 gattttgatgaggatgaactagaagctga 681
>ref|NM_127541.2| Arabidopsis thaliana unknown protein AT2G19830 mRNA, complete cds Length = 928 Score = 172 bits (87), Expect = 7e-40 Identities = 210/251 (83%) Strand = Plus / Plus Query: 123 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 182 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 304 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 363 Query: 183 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 242 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 364 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 423 Query: 243 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 302 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 424 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 483 Query: 303 aatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 362 || ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||| Sbjct: 484 aacattgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaa 543 Query: 363 caaatacaaga 373 || || ||||| Sbjct: 544 cagatccaaga 554
>gb|AY079421.1| Arabidopsis thaliana putative copia retroelement pol polyprotein (At2g19830) mRNA, complete cds Length = 673 Score = 172 bits (87), Expect = 7e-40 Identities = 210/251 (83%) Strand = Plus / Plus Query: 123 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 182 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 175 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 234 Query: 183 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 242 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 235 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 294 Query: 243 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 302 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 295 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 354 Query: 303 aatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 362 || ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||| Sbjct: 355 aacattgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaa 414 Query: 363 caaatacaaga 373 || || ||||| Sbjct: 415 cagatccaaga 425
>gb|AY045911.1| Arabidopsis thaliana putative copia retroelement pol polyprotein (At2g19830) mRNA, complete cds Length = 946 Score = 172 bits (87), Expect = 7e-40 Identities = 210/251 (83%) Strand = Plus / Plus Query: 123 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 182 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 306 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 365 Query: 183 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 242 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 366 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 425 Query: 243 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 302 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 426 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 485 Query: 303 aatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 362 || ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||| Sbjct: 486 aacattgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaa 545 Query: 363 caaatacaaga 373 || || ||||| Sbjct: 546 cagatccaaga 556
>emb|BX818948.1|CNS0A9WC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 829 Score = 172 bits (87), Expect = 7e-40 Identities = 210/251 (83%) Strand = Plus / Plus Query: 123 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 182 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 208 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 267 Query: 183 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 242 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 268 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 327 Query: 243 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 302 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 328 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 387 Query: 303 aatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaa 362 || ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||| Sbjct: 388 aacattgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaa 447 Query: 363 caaatacaaga 373 || || ||||| Sbjct: 448 cagatccaaga 458
>dbj|AK070667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056L17, full insert sequence Length = 1366 Score = 165 bits (83), Expect = 2e-37 Identities = 200/239 (83%) Strand = Plus / Plus Query: 105 aaagcaaagaataaaagagcggctatccaatcattgaagaggaaaaaactttatgagcag 164 ||||| |||||||||||||| || || |||| || |||||||| | | | |||||||| Sbjct: 390 aaagcgaagaataaaagagctgcaatacaatgcttaaagaggaagagattatatgagcaa 449 Query: 165 caaattgagcagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaa 224 || |||||||||||||| |||||||| || ||||| |||||||||||||| ||| | ||| Sbjct: 450 cagattgagcagcttggtaatttccaattaaggatacatgatcagatgataatgctggaa 509 Query: 225 gctgctaaagctacgacagagactgtggatgcattgaggactggagctaaagctatgaaa 284 | ||| || ||||| ||||||||||| ||||||||||| |||||||| || |||||| Sbjct: 510 ggtgcaaaggctacaacagagactgttgatgcattgagaactggagcatcggcgatgaaa 569 Query: 285 gcgatgcaaaaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatga 343 || ||||| ||||| ||||||||||| || || |||||||| ||||| ||||||||||| Sbjct: 570 gcaatgcacaaagcgacaaatattgacgacgttgacaagacaatggatgaaattaatga 628 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 384 gctcctcttggagcttctgctgattttgacgaggatgaactggaagctga 433 |||||| |||||||| | ||||||||||| || ||||| ||||||||||| Sbjct: 669 gctcctattggagctgcagctgattttgatgaagatgagctggaagctga 718
>dbj|AK060097.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G05, full insert sequence Length = 1139 Score = 165 bits (83), Expect = 2e-37 Identities = 200/239 (83%) Strand = Plus / Plus Query: 105 aaagcaaagaataaaagagcggctatccaatcattgaagaggaaaaaactttatgagcag 164 ||||| |||||||||||||| || || |||| || |||||||| | | | |||||||| Sbjct: 407 aaagcgaagaataaaagagctgcaatacaatgcttaaagaggaagagattatatgagcaa 466 Query: 165 caaattgagcagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaa 224 || |||||||||||||| |||||||| || ||||| |||||||||||||| ||| | ||| Sbjct: 467 cagattgagcagcttggtaatttccaattaaggatacatgatcagatgataatgctggaa 526 Query: 225 gctgctaaagctacgacagagactgtggatgcattgaggactggagctaaagctatgaaa 284 | ||| || ||||| ||||||||||| ||||||||||| |||||||| || |||||| Sbjct: 527 ggtgcaaaggctacaacagagactgttgatgcattgagaactggagcatcggcgatgaaa 586 Query: 285 gcgatgcaaaaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatga 343 || ||||| ||||| ||||||||||| || || |||||||| ||||| ||||||||||| Sbjct: 587 gcaatgcacaaagcgacaaatattgacgacgttgacaagacaatggatgaaattaatga 645 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 384 gctcctcttggagcttctgctgattttgacgaggatgaactggaagctga 433 |||||| |||||||| | ||||||||||| || ||||| ||||||||||| Sbjct: 686 gctcctattggagctgcagctgattttgatgaagatgagctggaagctga 735
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 302 aaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaa 361 |||||||||||| || || ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 5050591 aaatattgatgacgttgataagactatggatgaaattaatgaacagactgaaaacatgaa 5050650 Query: 362 acaaatacaagatgctctgtcagctcctcttggagcttctgctgattttgacgagg 417 |||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||| Sbjct: 5050651 acaaatacaagatgctttgtcagcccctcttggagcatctgctgattttgatgagg 5050706 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 207 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 266 ||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||||| Sbjct: 5050391 cagatgatcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggact 5050450 Query: 267 ggagctaaagctatgaaagcgatgcaaaa 295 |||||| |||||||||||| |||||||| Sbjct: 5050451 ggagctgcagctatgaaagcaatgcaaaa 5050479 Score = 109 bits (55), Expect = 9e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 33 atgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagcttgagagggcc 92 |||||||||||||| |||||||| ||||||||||| |||| || || || |||||||| Sbjct: 5049986 atgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaactggagagggct 5050045 Query: 93 aaggagttctcaaaagcaaagaataaaagag 123 ||||||||||||||||||||||||||||||| Sbjct: 5050046 aaggagttctcaaaagcaaagaataaaagag 5050076 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 122 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 181 ||||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 5050226 agcggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctagg 5050285 Query: 182 gaatttccagttgaggatccatgatcag 209 ||| ||||||||||| || ||||||||| Sbjct: 5050286 gaacttccagttgagaattcatgatcag 5050313 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 435 ctggaagagttggagggagcagagttggaatcccaactactggagcctgtt 485 |||||||| ||||||||||||| |||||||| || || || ||||||||| Sbjct: 5050810 ctggaagaactggagggagcagaattggaatctcagcttctcgagcctgtt 5050860
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 302 aaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaa 361 |||||||||||| || || ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 52708 aaatattgatgacgttgataagactatggatgaaattaatgaacagactgaaaacatgaa 52767 Query: 362 acaaatacaagatgctctgtcagctcctcttggagcttctgctgattttgacgagg 417 |||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||| Sbjct: 52768 acaaatacaagatgctttgtcagcccctcttggagcatctgctgattttgatgagg 52823 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 207 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 266 ||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||||| Sbjct: 52508 cagatgatcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggact 52567 Query: 267 ggagctaaagctatgaaagcgatgcaaaa 295 |||||| |||||||||||| |||||||| Sbjct: 52568 ggagctgcagctatgaaagcaatgcaaaa 52596 Score = 109 bits (55), Expect = 9e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 33 atgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagcttgagagggcc 92 |||||||||||||| |||||||| ||||||||||| |||| || || || |||||||| Sbjct: 52103 atgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaactggagagggct 52162 Query: 93 aaggagttctcaaaagcaaagaataaaagag 123 ||||||||||||||||||||||||||||||| Sbjct: 52163 aaggagttctcaaaagcaaagaataaaagag 52193 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 122 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 181 ||||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 52343 agcggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctagg 52402 Query: 182 gaatttccagttgaggatccatgatcag 209 ||| ||||||||||| || ||||||||| Sbjct: 52403 gaacttccagttgagaattcatgatcag 52430 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 435 ctggaagagttggagggagcagagttggaatcccaactactggagcctgtt 485 |||||||| ||||||||||||| |||||||| || || || ||||||||| Sbjct: 52927 ctggaagaactggagggagcagaattggaatctcagcttctcgagcctgtt 52977
>ref|NM_119060.3| Arabidopsis thaliana unknown protein AT4G29160 transcript variant AT4G29160.1 mRNA, complete cds Length = 1007 Score = 135 bits (68), Expect = 1e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 174 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 233 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 345 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 404 Query: 234 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 293 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 405 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 464 Query: 294 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 353 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 465 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 524 Query: 354 aacatgaaacaaatacaaga 373 ||||||||||| || ||||| Sbjct: 525 aacatgaaacagatccaaga 544
>ref|NM_202906.1| Arabidopsis thaliana unknown protein AT4G29160 transcript variant AT4G29160.2 mRNA, complete cds Length = 1350 Score = 135 bits (68), Expect = 1e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 174 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 233 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 688 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 747 Query: 234 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 293 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 748 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 807 Query: 294 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 353 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 808 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 867 Query: 354 aacatgaaacaaatacaaga 373 ||||||||||| || ||||| Sbjct: 868 aacatgaaacagatccaaga 887
>gb|AY072490.1| Arabidopsis thaliana putative protein (At4g29160; F19B15.190) mRNA, complete cds Length = 782 Score = 135 bits (68), Expect = 1e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 174 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 233 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 223 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 282 Query: 234 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 293 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 283 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 342 Query: 294 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 353 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 343 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 402 Query: 354 aacatgaaacaaatacaaga 373 ||||||||||| || ||||| Sbjct: 403 aacatgaaacagatccaaga 422
>gb|AY042853.1| Arabidopsis thaliana putative protein (F19B15.190) mRNA, complete cds Length = 942 Score = 135 bits (68), Expect = 1e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 174 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 233 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 328 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 387 Query: 234 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 293 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 388 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 447 Query: 294 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 353 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 448 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 507 Query: 354 aacatgaaacaaatacaaga 373 ||||||||||| || ||||| Sbjct: 508 aacatgaaacagatccaaga 527
>gb|AY088519.1| Arabidopsis thaliana clone 7471 mRNA, complete sequence Length = 956 Score = 135 bits (68), Expect = 1e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 174 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 233 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 320 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 379 Query: 234 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 293 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 380 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 439 Query: 294 aaagcaacaaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaa 353 ||||||||||||||||||||||| || ||||| |||||||| || ||||| || || || Sbjct: 440 aaagcaacaaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgag 499 Query: 354 aacatgaaacaaatacaaga 373 ||||||||||| || ||||| Sbjct: 500 aacatgaaacagatccaaga 519
>gb|BT013152.1| Lycopersicon esculentum clone 134156F, mRNA sequence Length = 1035 Score = 129 bits (65), Expect = 9e-27 Identities = 185/225 (82%) Strand = Plus / Plus Query: 138 ttgaagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgagg 197 ||||| ||||||| ||||| ||||||||||| |||||||| || || ||||| ||| | Sbjct: 287 ttgaaaaggaaaaggctttacgagcagcaaatcgagcagctcggaaacttccaattgcgt 346 Query: 198 atccatgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgca 257 || |||||||||||||| |||||||||| ||| ||||| || || |||||||| ||||| Sbjct: 347 attcatgatcagatgataatgttagaaggtgcaaaagccacaacggagactgttgatgct 406 Query: 258 ttgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtc 317 || || |||||||| || |||||||| |||||||| ||||| |||||||| |||||| Sbjct: 407 ttaagaactggagcagctgcaatgaaagctatgcaaaaggcaacgaatattgacgatgtc 466 Query: 318 gacaagactatggacgaaattaatgaacagacagaaaacatgaaa 362 ||||| || ||||| || || ||||| ||||| || || |||||| Sbjct: 467 gacaaaacaatggatgagatcaatgagcagactgagaatatgaaa 511
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 207 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 266 |||||||| |||||||||| ||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 64719 cagatgattatgttagaaggtgctaaagcaacaacagagactgtagatgctttgaggact 64778 Query: 267 ggagctaaagctatgaaagcgatgcaaaaagcaac 301 |||||| || |||||||| ||||| |||||||| Sbjct: 64779 ggagcttctgcaatgaaagctatgcagaaagcaac 64813 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 306 attgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaaacaa 365 ||||||||||| |||||||| ||||| || || |||||||| || || ||||||||||| Sbjct: 64915 attgatgatgttgacaagacaatggatgagatcaatgaacaaactgagaacatgaaacag 64974 Query: 366 atacaaga 373 || ||||| Sbjct: 64975 atccaaga 64982 Score = 44.1 bits (22), Expect = 0.42 Identities = 58/70 (82%) Strand = Plus / Plus Query: 122 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 181 ||||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| || Sbjct: 64540 agcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcgg 64599 Query: 182 gaatttccag 191 |||||||||| Sbjct: 64600 gaatttccag 64609
>emb|BX827870.1|CNS0A30O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH2ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 85.7 bits (43), Expect = 1e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 174 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 233 |||||||||||||||||| | | || |||||||| ||||| ||||||| || ||| ||| Sbjct: 689 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagcaggtgcaaaa 748 Query: 234 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 293 || || || || ||||| ||||||||||| | ||||||| || || || | ||||| Sbjct: 749 gcaacaaccgacactgttgatgcattgagcagtggagcttctgcaatcaaggaaatgcag 808 Query: 294 aaagcaacaaatattgatgatgtcgacaagactatggac 332 ||||||||||||||||||||||| || ||||| |||||| Sbjct: 809 aaagcaacaaatattgatgatgtggataagaccatggac 847
>dbj|AK070935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068B07, full insert sequence Length = 967 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 391 ttggagcttctgctgattttgacgaggatgaactggaagctgagctggaaga 442 |||| |||||||||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 641 ttggcgcttctgctgatttcgacgaggatgaactagaagcagagctggaaga 692
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 207 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 266 |||||||| |||||||||| ||| ||||| || || || ||||| ||||||||||||| | Sbjct: 109769 cagatgattatgttagaaggtgcaaaagcaacaaccgaaactgttgatgcattgaggagt 109828 Query: 267 ggagctaaagctatgaaagcgatgcaaaaagcaac 301 |||||| || ||||| || ||||| |||||||| Sbjct: 109829 ggagcttctgcaatgaaggcaatgcagaaagcaac 109863 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 302 aaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaa 361 ||||||||||||||| || ||||| |||||||| || ||||| || || || |||||||| Sbjct: 110034 aaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgagaacatgaa 110093 Query: 362 acaaatacaaga 373 ||| || ||||| Sbjct: 110094 acagatccaaga 110105
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 207 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 266 |||||||| |||||||||| ||| ||||| || || || ||||| ||||||||||||| | Sbjct: 93296 cagatgattatgttagaaggtgcaaaagcaacaaccgaaactgttgatgcattgaggagt 93355 Query: 267 ggagctaaagctatgaaagcgatgcaaaaagcaac 301 |||||| || ||||| || ||||| |||||||| Sbjct: 93356 ggagcttctgcaatgaaggcaatgcagaaagcaac 93390 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 302 aaatattgatgatgtcgacaagactatggacgaaattaatgaacagacagaaaacatgaa 361 ||||||||||||||| || ||||| |||||||| || ||||| || || || |||||||| Sbjct: 93561 aaatattgatgatgtggataagaccatggacgagatcaatgagcaaaccgagaacatgaa 93620 Query: 362 acaaatacaaga 373 ||| || ||||| Sbjct: 93621 acagatccaaga 93632
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 156 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgat 214 |||||||| || |||||||||||||| |||||||| || ||||| ||||||||| |||| Sbjct: 23837717 tatgagcaacagattgagcagcttggtaatttccaattaaggatacatgatcaggtgat 23837775 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 208 agatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactg 267 ||||||| ||| | |||| ||| || ||||| ||||||||||| ||||||||||| |||| Sbjct: 23837865 agatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcattgagaactg 23837924 Query: 268 gagc 271 |||| Sbjct: 23837925 gagc 23837928 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 302 aaatattgatgatgtcgacaagactatggacgaaattaatga 343 ||||||||| || || |||||||| ||||| ||||||||||| Sbjct: 23838659 aaatattgacgacgttgacaagacaatggatgaaattaatga 23838700
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 156 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgat 214 |||||||| || |||||||||||||| |||||||| || ||||| ||||||||| |||| Sbjct: 77382 tatgagcaacagattgagcagcttggtaatttccaattaaggatacatgatcaggtgat 77440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 208 agatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactg 267 ||||||| ||| | |||| ||| || ||||| ||||||||||| ||||||||||| |||| Sbjct: 77530 agatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcattgagaactg 77589 Query: 268 gagc 271 |||| Sbjct: 77590 gagc 77593 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 302 aaatattgatgatgtcgacaagactatggacgaaattaatga 343 ||||||||| || || |||||||| ||||| ||||||||||| Sbjct: 78324 aaatattgacgacgttgacaagacaatggatgaaattaatga 78365
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 391 ttggagcttctgctgattttgacgagg 417 |||| |||||||||||||||||||||| Sbjct: 1011817 ttggcgcttctgctgattttgacgagg 1011791
>gb|AF111147.1|AF111147 Ipomoea cordatotriloba granule-bound starch synthase (waxy) gene, partial cds Length = 513 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 158 tgagcagcaaattgagcagcttg 180 ||||||||||||||||||||||| Sbjct: 393 tgagcagcaaattgagcagcttg 415
>gb|AF111145.1|AF111145 Ipomoea lacunosa granule-bound starch synthase (waxy) gene, partial cds Length = 585 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 158 tgagcagcaaattgagcagcttg 180 ||||||||||||||||||||||| Sbjct: 434 tgagcagcaaattgagcagcttg 456
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 391 ttggagcttctgctgattttgacgagg 417 |||| |||||||||||||||||||||| Sbjct: 1011817 ttggcgcttctgctgattttgacgagg 1011791
>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 97056 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 391 ttggagcttctgctgattttgacgagg 417 |||| |||||||||||||||||||||| Sbjct: 7088 ttggcgcttctgctgattttgacgagg 7062
>gb|AC153583.10| Mus musculus 6 BAC RP23-349K15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196821 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 432 gagctggaagagttggagggag 453 |||||||||||||||||||||| Sbjct: 159237 gagctggaagagttggagggag 159258
>gb|AC153918.4| Mus musculus BAC RP23-89M16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232574 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 432 gagctggaagagttggagggag 453 |||||||||||||||||||||| Sbjct: 173829 gagctggaagagttggagggag 173808
>ref|NM_100544.2| Arabidopsis thaliana NIH (NUCLEAR DEIH-BOXHELICASE) AT1G06670 (NIH) mRNA, complete cds Length = 5144 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 cgaggatgaactggaagctga 433 ||||||||||||||||||||| Sbjct: 2503 cgaggatgaactggaagctga 2483
>gb|AC170188.2| Mus musculus BAC clone RP24-195M20 from chromosome 13, complete sequence Length = 165687 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 45765 aaagagaaagtgttagtgaaaaaag 45741
>gb|BC019183.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:5010155), containing frame-shift errors Length = 2219 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1794 aaagagaaagtgttagtgaaaaaag 1818
>emb|Z82271.1|CEF54E12 Caenorhabditis elegans Cosmid F54E12, complete sequence Length = 13877 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tggagaagaaagagaaagtgt 57 ||||||||||||||||||||| Sbjct: 173 tggagaagaaagagaaagtgt 153
>gb|AC131888.1| Homo sapiens chromosome 16 clone RP11-626G3, complete sequence Length = 162957 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 agaaagagaaagtgttagagaaaaa 67 |||||||||||| |||||||||||| Sbjct: 70689 agaaagagaaagagttagagaaaaa 70665
>gb|AC010941.6| Homo sapiens chromosome 8, clone RP11-115C6, complete sequence Length = 166129 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 actggaagctgagctggaaga 442 ||||||||||||||||||||| Sbjct: 79070 actggaagctgagctggaaga 79050
>ref|NM_008634.1| Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA Length = 8818 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1800 aaagagaaagtgttagtgaaaaaag 1824
>dbj|AK143169.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130206H16 product:microtubule-associated protein 1 B, full insert sequence Length = 1759 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1595 aaagagaaagtgttagtgaaaaaag 1619
>gb|AC090875.9| Homo sapiens chromosome 8, clone RP11-724H22, complete sequence Length = 165505 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 actggaagctgagctggaaga 442 ||||||||||||||||||||| Sbjct: 21003 actggaagctgagctggaaga 21023
>dbj|AK157749.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130017F22 product:microtubule-associated protein 1 B, full insert sequence Length = 1849 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1634 aaagagaaagtgttagtgaaaaaag 1658
>ref|XM_681842.1| PREDICTED: Danio rerio similar to Chromatin modifying protein 5 (LOC558613), mRNA Length = 721 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 411 gacgaggatgaactggaagctgagctgga 439 |||||||||||||||||||| || ||||| Sbjct: 533 gacgaggatgaactggaagcagaactgga 561
>gb|AC111220.6| Rattus norvegicus Chr BAC CH230-122K11 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 237466 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 aaaaagcaacaaatattgatg 312 ||||||||||||||||||||| Sbjct: 198906 aaaaagcaacaaatattgatg 198926
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 aaaagcaacaaatattgatga 313 ||||||||||||||||||||| Sbjct: 525511 aaaagcaacaaatattgatga 525491
>gb|AC109037.6| Rattus norvegicus 18 BAC CH230-178G23 (Children's Hospital Oakland Research Institute) complete sequence Length = 208650 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 aaaaagcaacaaatattgatg 312 ||||||||||||||||||||| Sbjct: 147112 aaaaagcaacaaatattgatg 147092
>gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence Length = 171058 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 aaaagcaacaaatattgatga 313 ||||||||||||||||||||| Sbjct: 23246 aaaagcaacaaatattgatga 23226
>gb|BC037105.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:5366028), partial cds Length = 2133 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1807 aaagagaaagtgttagtgaaaaaag 1831
>dbj|AK038690.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230055D22 product:microtubule-associated protein 1 B, full insert sequence Length = 1191 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 683 aaagagaaagtgttagtgaaaaaag 707
>gb|BC078457.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:30360897) Length = 2112 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1788 aaagagaaagtgttagtgaaaaaag 1812
>gb|BC052016.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:6404340) Length = 2112 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1783 aaagagaaagtgttagtgaaaaaag 1807
>gb|BC046287.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:6468810) Length = 2110 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1783 aaagagaaagtgttagtgaaaaaag 1807
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold Length = 1570569 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 aaaagcaacaaatattgatga 313 ||||||||||||||||||||| Sbjct: 552782 aaaagcaacaaatattgatga 552762
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I, complete sequence Length = 93724 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cgaggatgaactggaagctga 433 ||||||||||||||||||||| Sbjct: 9125 cgaggatgaactggaagctga 9145
>gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BAC F4H5 genomic sequence, complete sequence Length = 91608 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cgaggatgaactggaagctga 433 ||||||||||||||||||||| Sbjct: 90211 cgaggatgaactggaagctga 90231
>dbj|D84225.1| Arabidopsis thaliana mRNA for DEIH-box RNA/DNA helicase, complete cds Length = 5166 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 cgaggatgaactggaagctga 433 ||||||||||||||||||||| Sbjct: 2503 cgaggatgaactggaagctga 2483
>gb|AC139381.4| Mus musculus BAC clone RP23-171D1 from 13, complete sequence Length = 242105 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 225690 aaagagaaagtgttagtgaaaaaag 225714
>gb|DQ295295.1| Maladera holosericea clone JT38 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1495 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 424 tggaagctgagctggaagagttgga 448 ||||||||||||||||| ||||||| Sbjct: 19 tggaagctgagctggaatagttgga 43
>emb|X51396.1|MMMAP1B Mus musculus mRNA for microtubule-associated protein 1B (MAP1B gene) Length = 8818 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 aaagagaaagtgttagagaaaaaag 69 |||||||||||||||| |||||||| Sbjct: 1800 aaagagaaagtgttagtgaaaaaag 1824
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 tctcaaaagcaaagaataaaagag 123 |||||||||||||||| ||||||| Sbjct: 13899 tctcaaaagcaaagaacaaaagag 13876
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 atgaaagcgatgcaaaaagc 298 |||||||||||||||||||| Sbjct: 391070 atgaaagcgatgcaaaaagc 391051
>gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, complete sequence Length = 198404 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 aaaagcaaagaataaaagag 123 |||||||||||||||||||| Sbjct: 163290 aaaagcaaagaataaaagag 163309
>gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosome 7, complete sequence Length = 202580 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tccatgatcagatgatcatg 218 |||||||||||||||||||| Sbjct: 40660 tccatgatcagatgatcatg 40679
>gb|AC102361.13| Mus musculus chromosome 18, clone RP23-37I2, complete sequence Length = 213628 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tcaaaagcaaagaataaaag 121 |||||||||||||||||||| Sbjct: 200193 tcaaaagcaaagaataaaag 200212
>ref|XM_742552.1| Aspergillus fumigatus Af293 DEAH-box RNA helicase (Afu6g04330) partial mRNA Length = 3636 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 tcagctcctcttggagcttctgct 404 ||||||||||| |||||||||||| Sbjct: 148 tcagctcctctcggagcttctgct 125
>gb|AY465182.1| Nematostella vectensis tropomyosin mRNA, complete cds Length = 1175 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gctgagcttgagagggccaaggag 98 ||||||||||||| |||||||||| Sbjct: 725 gctgagcttgagaaggccaaggag 748
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence Length = 229312 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tccatgatcagatgatcatg 218 |||||||||||||||||||| Sbjct: 204375 tccatgatcagatgatcatg 204394
>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence Length = 184032 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 aaaacatgaaacaaatacaa 371 |||||||||||||||||||| Sbjct: 146731 aaaacatgaaacaaatacaa 146712
>gb|AC138133.26| Medicago truncatula clone mth2-9o2, complete sequence Length = 149166 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tgcaaaaagcaacaaatatt 308 |||||||||||||||||||| Sbjct: 138005 tgcaaaaagcaacaaatatt 138024
>gb|AC126790.38| Medicago truncatula clone mth2-10d14, complete sequence Length = 127447 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tgcaaaaagcaacaaatatt 308 |||||||||||||||||||| Sbjct: 88358 tgcaaaaagcaacaaatatt 88377
>emb|AL136094.13| Human DNA sequence from clone RP3-527B10 on chromosome 6q25.1-25.3 Contains a high mobility group (nonhistone chromosomal) protein 4 (HMG4) pseudogene, complete sequence Length = 156667 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 attaatgaacagacagaaaa 355 |||||||||||||||||||| Sbjct: 141338 attaatgaacagacagaaaa 141357
>gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074L01, complete sequence Length = 115339 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 415 aggatgaactggaagctgagctggaaga 442 |||||||||| ||||| ||||||||||| Sbjct: 77969 aggatgaactagaagcagagctggaaga 77942
>gb|AY954921.1| Mythimna unipuncta farnesyl diphosphate synthase mRNA, complete cds Length = 1862 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgctggagaagaaagagaa 52 |||||||||||||||||||| Sbjct: 443 atgctggagaagaaagagaa 462
>gb|BC044378.1| Danio rerio cyclin T2, mRNA (cDNA clone MGC:55357 IMAGE:2601469), complete cds Length = 2115 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gatgaactggaagctgagct 436 |||||||||||||||||||| Sbjct: 1805 gatgaactggaagctgagct 1786
>emb|AL844494.41| Mouse DNA sequence from clone RP23-304I1 on chromosome 4, complete sequence Length = 147961 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 93311 tgtcagctcctcttggagct 93292
>emb|BX548253.31| Mouse DNA sequence from clone RP23-382I12 on chromosome 4, complete sequence Length = 73646 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 6966 tgtcagctcctcttggagct 6985
>emb|BX666061.27| Mouse DNA sequence from clone RP24-427A22 on chromosome 4, complete sequence Length = 208482 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 117292 tgtcagctcctcttggagct 117273 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 1801 tgtcagctcctcttggagct 1820
>emb|AL824709.35| Mouse DNA sequence from clone RP23-388P16 on chromosome 4, complete sequence Length = 211610 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 123860 tgtcagctcctcttggagct 123879 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 27537 tgtcagctcctcttggagct 27518
>gb|AC087559.69| Mus musculus strain C57BL/6J clone rp23-355o11 map 4, complete sequence Length = 227966 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 175296 tgtcagctcctcttggagct 175277 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 59802 tgtcagctcctcttggagct 59821
>dbj|AK001582.1| Homo sapiens cDNA FLJ10720 fis, clone NT2RP3001116 Length = 3591 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaagagaaagtgttagagaa 64 |||||||||||||||||||| Sbjct: 1666 aaagagaaagtgttagagaa 1647
>gb|AC079464.5| Homo sapiens chromosome 5 clone CTB-12O2, complete sequence Length = 55687 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaagagaaagtgttagagaa 64 |||||||||||||||||||| Sbjct: 21439 aaagagaaagtgttagagaa 21420
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 attgaagaggaaaaaacttt 156 |||||||||||||||||||| Sbjct: 20461 attgaagaggaaaaaacttt 20480
>gb|AC104059.5| Homo sapiens BAC clone RP13-514E23 from 4, complete sequence Length = 165223 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 catgaaacaaatacaagatgctct 379 ||||||||||||| |||||||||| Sbjct: 65589 catgaaacaaatagaagatgctct 65566
>gb|AC108521.1| Caenorhabditis briggsae cosmid CB004G08, complete sequence Length = 82505 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 aagagaaagtgttagagaaa 65 |||||||||||||||||||| Sbjct: 36202 aagagaaagtgttagagaaa 36221
>ref|XM_679743.1| PREDICTED: Danio rerio similar to Cyclin T2, transcript variant 1 (LOC573402), mRNA Length = 2100 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gatgaactggaagctgagct 436 |||||||||||||||||||| Sbjct: 1799 gatgaactggaagctgagct 1780
>ref|XM_702593.1| PREDICTED: Danio rerio similar to Cyclin T2, transcript variant 2 (LOC573402), mRNA Length = 2141 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gatgaactggaagctgagct 436 |||||||||||||||||||| Sbjct: 1798 gatgaactggaagctgagct 1779
>gb|AC024288.9| Homo sapiens, clone RP11-23B5, complete sequence Length = 169540 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgctggagaagaaagagaa 52 |||||||||||||||||||| Sbjct: 1471 atgctggagaagaaagagaa 1490
>gb|AC149502.2| Xenopus tropicalis clone CH216-11H14, complete sequence Length = 196315 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 agaaagtgttagagaaaaaagcag 72 ||||||||||||||||| |||||| Sbjct: 91128 agaaagtgttagagaaagaagcag 91105
>dbj|AK048701.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230011E24 product:unclassifiable, full insert sequence Length = 3228 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 350 tgtcagctcctcttggagct 331
>emb|BX649314.6| Zebrafish DNA sequence from clone DKEYP-111A3 in linkage group 23, complete sequence Length = 170403 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 aaaaagcaacaaatattgat 311 |||||||||||||||||||| Sbjct: 117243 aaaaagcaacaaatattgat 117262
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 415 aggatgaactggaagctgagctggaaga 442 |||||||||| ||||| ||||||||||| Sbjct: 1079687 aggatgaactagaagcagagctggaaga 1079660
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 cagctcctcttggagcttct 401 |||||||||||||||||||| Sbjct: 7192137 cagctcctcttggagcttct 7192156
>emb|BX820442.1|CNS0A9L1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH34ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 956 Score = 40.1 bits (20), Expect = 6.6 Identities = 92/116 (79%) Strand = Plus / Plus Query: 156 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgatc 215 |||||||| ||| |||| ||||| |||||| ||||| | | || |||||||| || ||| Sbjct: 246 tatgagcaacaagttgaacagctcgggaatgtccagctccgtattcatgatcaaatcatc 305 Query: 216 atgttagaagctgctaaagctacgacagagactgtggatgcattgaggactggagc 271 | | |||| |||||| || || ||||||| ||| ||||| || ||||||||||| Sbjct: 306 ctctccgaaggtgctaacgcaacaacagagaatgtagatgcgtttaggactggagc 361
>ref|NM_199828.1| Danio rerio cyclin T2 (ccnt2), mRNA Length = 2115 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gatgaactggaagctgagct 436 |||||||||||||||||||| Sbjct: 1805 gatgaactggaagctgagct 1786
>gb|AC092638.2| Homo sapiens BAC clone RP11-363G3 from 2, complete sequence Length = 167941 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 aacaaatattgatgatgtcg 318 |||||||||||||||||||| Sbjct: 128374 aacaaatattgatgatgtcg 128355
>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence Length = 224670 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgctggagaagaaagagaa 52 |||||||||||||||||||| Sbjct: 171199 atgctggagaagaaagagaa 171218
>gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome 8, complete sequence Length = 168189 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gagctggaagagttggagggagca 455 ||||||| |||||||||||||||| Sbjct: 34918 gagctgggagagttggagggagca 34941
>dbj|AK212392.1| Mus musculus cDNA, clone:Y2G0124M17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000025971, based on BLAT search Length = 220 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 actggaagctgagctggaag 441 |||||||||||||||||||| Sbjct: 118 actggaagctgagctggaag 99
>dbj|AK211814.1| Mus musculus cDNA, clone:Y2G0122P09, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044388, based on BLAT search Length = 365 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 actggaagctgagctggaag 441 |||||||||||||||||||| Sbjct: 184 actggaagctgagctggaag 165
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 cagctcctcttggagcttct 401 |||||||||||||||||||| Sbjct: 92074 cagctcctcttggagcttct 92093
>emb|AL929096.5| Zebrafish DNA sequence from clone DKEY-216E9 in linkage group 17, complete sequence Length = 192592 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gacgaggatgaactggaagc 430 |||||||||||||||||||| Sbjct: 66768 gacgaggatgaactggaagc 66787
>gb|AC131338.4| Mus musculus BAC clone RP23-29O10 from 18, complete sequence Length = 203229 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tcaaaagcaaagaataaaag 121 |||||||||||||||||||| Sbjct: 169694 tcaaaagcaaagaataaaag 169675
>emb|BX005280.14| Zebrafish DNA sequence from clone CH211-256J23 in linkage group 18, complete sequence Length = 164570 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 atgcaaaaagcaacaaatattgat 311 ||||||||||||| |||||||||| Sbjct: 147206 atgcaaaaagcaataaatattgat 147183
>gb|AC090655.63| Mus musculus strain C57BL/6J clone rp23-382i12 map 4, complete sequence Length = 264975 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 200175 tgtcagctcctcttggagct 200156 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 113229 tgtcagctcctcttggagct 113248
>gb|AF111141.1|AF111141 Ipomoea gracilis granule-bound starch synthase (waxy) gene, partial cds Length = 593 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 tgagcagcaaattgagcagcttgg 181 ||||||||| |||||||||||||| Sbjct: 438 tgagcagcagattgagcagcttgg 461
>dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2562J17, complete sequences Length = 215225 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggagaagaaagagaaagtgt 57 |||||||||||||||||||| Sbjct: 88655 ggagaagaaagagaaagtgt 88674
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 415 aggatgaactggaagctgagctggaaga 442 |||||||||| ||||| ||||||||||| Sbjct: 1077408 aggatgaactagaagcagagctggaaga 1077381
>gb|AC132131.4| Mus musculus BAC clone RP23-356D16 from 10, complete sequence Length = 170192 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 atgaaagcgatgcaaaaagcaaca 302 ||||||||||||||| |||||||| Sbjct: 85359 atgaaagcgatgcaagaagcaaca 85382
>gb|AC145305.4| Mus musculus BAC clone RP23-129K15 from 8, complete sequence Length = 196153 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gagctggaagagttggagggagca 455 ||||||| |||||||||||||||| Sbjct: 184034 gagctgggagagttggagggagca 184057
>emb|AL772334.16| Mouse DNA sequence from clone RP23-411B7 on chromosome 4, complete sequence Length = 150841 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tgtcagctcctcttggagct 398 |||||||||||||||||||| Sbjct: 22245 tgtcagctcctcttggagct 22226
>gb|U17896.1|XMU17896 Xiphophorus maculatus ERCC2/XPD gene, complete cds Length = 16840 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 aattaatgaacagacagaaaacat 358 |||||||||||||| ||||||||| Sbjct: 3369 aattaatgaacagaaagaaaacat 3392
>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gctggagaagaaagagaaag 54 |||||||||||||||||||| Sbjct: 132583 gctggagaagaaagagaaag 132602
>emb|AL805959.11| Mouse DNA sequence from clone RP23-391H10 on chromosome 2, complete sequence Length = 217595 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gctctgtcagctcctcttgg 394 |||||||||||||||||||| Sbjct: 42633 gctctgtcagctcctcttgg 42652
>dbj|AB073334.1| Cyprinus carpio mRNA for immunoglobulin light chain, partial cds, clone:Cpf4 Length = 540 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 actggaagctgagctggaag 441 |||||||||||||||||||| Sbjct: 461 actggaagctgagctggaag 480
>dbj|AB073333.1| Cyprinus carpio mRNA for immunoglobulin light chain, partial cds, clone:Cpf3 Length = 537 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 actggaagctgagctggaag 441 |||||||||||||||||||| Sbjct: 482 actggaagctgagctggaag 501
>dbj|AB073332.1| Cyprinus carpio mRNA for immunoglobulin light chain, partial cds, clone:Cpf2 Length = 534 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 actggaagctgagctggaag 441 |||||||||||||||||||| Sbjct: 479 actggaagctgagctggaag 498
>dbj|AB073331.1| Cyprinus carpio mRNA for immunoglobulin light chain, partial cds, clone:Cpf1 Length = 534 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 actggaagctgagctggaag 441 |||||||||||||||||||| Sbjct: 479 actggaagctgagctggaag 498
>dbj|AB035728.1| Cyprinus carpio IgL mRNA for immunoglobulin light chain, partial cds, clone:Cpc1 Length = 557 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 actggaagctgagctggaag 441 |||||||||||||||||||| Sbjct: 104 actggaagctgagctggaag 123 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,221,231 Number of Sequences: 3902068 Number of extensions: 6221231 Number of successful extensions: 146876 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 146246 Number of HSP's gapped (non-prelim): 628 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
