No.
Definition
Score (bits)
E Value
1 ref|XM_475089.1| Oryza sativa (japonica cultivar-group), predic...
98
4e-17
2 gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome...
98
4e-17
3 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
98
4e-17
4 gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome...
98
4e-17
5 gb|AC090415.5| Homo sapiens chromosome 18, clone RP11-529J17, co...
44
0.52
6 gb|AC091691.7| Homo sapiens chromosome 18, clone RP11-47G4, comp...
44
0.52
7 gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, comp...
42
2.1
8 gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr...
42
2.1
9 gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosom...
42
2.1
10 ref|XM_570792.1| Cryptococcus neoformans var. neoformans JEC21 n...
42
2.1
11 gb|AC130835.3| Mus musculus BAC clone RP24-132F18 from chromosom...
42
2.1
12 emb|CR378665.1| Photobacterium profundum SS9; segment 3/12
42
2.1
13 gb|U00089.2| Mycoplasma pneumoniae M129, complete genome
42
2.1
14 tpd|BR000051.1| TPA: TPA_exp: Ciona intestinalis Ci-ZF(CCHC)-1 m...
42
2.1
15 gb|AC122563.8| Mus musculus chromosome 1, clone RP24-208F6, comp...
40
8.2
16 gb|AC102457.11| Mus musculus chromosome 19, clone RP24-312C18, c...
40
8.2
17 ref|XM_631345.1| Dictyostelium discoideum hypothetical protein (...
40
8.2
18 gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chr...
40
8.2
19 gb|AC118934.9| Mus musculus chromosome 19, clone RP24-172J14, co...
40
8.2
20 gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-...
40
8.2
21 gb|AC140336.2| Mus musculus BAC clone RP24-266F17 from chromosom...
40
8.2
22 gb|AC016250.5| Homo sapiens chromosome 8 clone RP11-516P9, compl...
40
8.2
23 gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c...
40
8.2
24 gb|AC145922.2| Pan troglodytes BAC clone RP43-10M11 from 7, comp...
40
8.2
25 ref|XM_842848.1| Leishmania major strain Friedlin hypothetical p...
40
8.2
26 gb|AC146177.3| Pan troglodytes BAC clone RP43-35P5 from 7, compl...
40
8.2
27 emb|Z74045.1|CET27F2 Caenorhabditis elegans Cosmid T27F2, comple...
40
8.2
28 gb|AC117263.4| Mus musculus BAC clone RP24-547F18 from chromosom...
40
8.2
29 gb|AC124773.4| Mus musculus BAC clone RP23-49B23 from 3, complet...
40
8.2
30 gb|AC005048.2| Homo sapiens BAC clone CTB-15P3 from 7, complete ...
40
8.2
31 gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, com...
40
8.2
32 gb|DQ139344.1| Caprine herpesvirus 1 strain Ba-1 glycoprotein D ...
40
8.2
33 ref|XM_500224.1| Yarrowia lipolytica CLIB122, YALI0A18964g predi...
40
8.2
34 emb|AL356114.12| Human DNA sequence from clone RP11-257I14 on ch...
40
8.2
35 gb|AC103785.4| Homo sapiens chromosome 8, clone RP11-727C12, com...
40
8.2
36 emb|AL132775.29|HSDJ46C2 Human DNA sequence from clone RP1-46C2 ...
40
8.2
37 emb|AL034553.12|HS914P20 Human DNA sequence from clone RP5-914P2...
40
8.2
38 emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, ...
40
8.2
39 emb|AL049483.1|ATF20B18 Arabidopsis thaliana DNA chromosome 4, B...
40
8.2
40 emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, B...
40
8.2
41 emb|AJ567484.1|LSA567484 Lactobacillus sakei gap operon (cggR, g...
40
8.2
42 gb|AC025207.5| Homo sapiens chromosome 8, clone RP11-193J8, comp...
40
8.2
43 emb|BX548042.7| Zebrafish DNA sequence from clone DKEY-146L4 in ...
40
8.2
44 gb|AC108048.6| Homo sapiens BAC clone RP11-323K3 from 4, complet...
40
8.2
45 gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 geno...
40
8.2
46 gb|AC046144.15| Homo sapiens 3 BAC RP11-628J14 (Roswell Park Can...
40
8.2
47 gb|DQ361576.1| Shigella boydii strain G1226 DcuA (dcuA) gene, pa...
40
8.2
48 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.2
49 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.2
50 gb|AY879287.1| Ocimum basilicum alcohol dehydrogenase-like prote...
40
8.2
51 dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
40
8.2
52 emb|AL591671.8| Zebrafish DNA sequence from clone BUSM1-107D16 i...
40
8.2
53 emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
40
8.2
54 gb|AC116863.6| Mus musculus chromosome 19, clone RP24-408G9, com...
40
8.2
55 emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chr...
40
8.2
56 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
40
8.2
57 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
40
8.2
58 emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb...
40
8.2
59 emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa...
40
8.2
60 gb|AC150276.2| Mus musculus BAC clone RP23-177G19 from 19, compl...
40
8.2
61 emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1...
40
8.2
62 emb|AL591495.12| Mouse DNA sequence from clone RP23-61O3 on chro...
40
8.2
63 emb|AL845442.7| Mouse DNA sequence from clone RP23-392D9 on chro...
40
8.2
64 emb|AL928909.7| Mouse DNA sequence from clone RP23-320I18 on chr...
40
8.2
65 dbj|AP003548.2| Homo sapiens genomic DNA, chromosome 8q23, clone...
40
8.2
>ref|XM_475089.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1647
Score = 97.6 bits (49), Expect = 4e-17
Identities = 142/173 (82%)
Strand = Plus / Plus
Query: 64 tatgaatgtggcgttcctggtcatctatcatctgcttgcccaaataaaagtgctcctgaa 123
|||||||||||| ||||||||| | || ||| ||||||| ||||| | ||| |||||
Sbjct: 1099 tatgaatgtggcacgcctggtcatatctcttcttcttgccctaataagaaggcttctgaa 1158
Query: 124 gtcatagttgatgaaaataaggccaatactgagtcagccacaacagcatcgaagaagaga 183
| ||| ||||||||| ||||| ||| ||| |||| |||| || | || ||||| ||
Sbjct: 1159 gccatttctgatgaaaagaaggctaatgttgactcagtcacagcatcgtcaaagaaaagg 1218
Query: 184 cggacatgctatgaatgtggcattcctggccatctgtcgtctgcttgcccaaa 236
||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 1219 cggacatgctatgaatgtggcattcctggccatctctcatcggcttgcccaaa 1271
Score = 93.7 bits (47), Expect = 6e-16
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 25 gactcagtcccaacatcgtcgaagaagagacggacatgctatgaatgtggcgttcctggt 84
||||||||| || ||||||| ||||| || ||||||||||||||||||||| |||||||
Sbjct: 1189 gactcagtcacagcatcgtcaaagaaaaggcggacatgctatgaatgtggcattcctggc 1248
Query: 85 catctatcatctgcttgcccaaa 107
||||| ||||| |||||||||||
Sbjct: 1249 catctctcatcggcttgcccaaa 1271
Score = 69.9 bits (35), Expect = 9e-09
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 362 ggaaatgttatgaatgtggcatctccggtcatctctcatcagcttgccccaacaa 416
||||||| |||||||| ||||| | |||||||||||||||||||||||||||||
Sbjct: 1400 ggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccccaacaa 1454
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 46 aagaagagacggacatgctatgaatgtggcgttcctggtcatctatcatctgcttgccc 104
|||||||| |||| |||||||||||| ||| ||||||||||||| ||||| ||||||||
Sbjct: 1390 aagaagaggcggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccc 1448
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 175 aagaagagacggacatgctatgaatgtggcattcctggccatctgtcgtctgcttgccc 233
|||||||| |||| |||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 1390 aagaagaggcggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccc 1448
Score = 58.0 bits (29), Expect = 3e-05
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 553 tgctatgaatgcggcatagctggtcatctctcctcagaatgccccaaca 601
||||||||||||||||| ||||||||||||| |||| ||||||||||
Sbjct: 1405 tgctatgaatgcggcattcctggtcatctctcatcagcttgccccaaca 1453
Score = 58.0 bits (29), Expect = 3e-05
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 370 tatgaatgtggcatctccggtcatctctcatcagcttgccccaacaagaaggc 422
|||||||||||||| | || ||||||||||| |||||||| |||||||||||
Sbjct: 1228 tatgaatgtggcattcctggccatctctcatcggcttgcccaaacaagaaggc 1280
Score = 56.0 bits (28), Expect = 1e-04
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 175 aagaagagacggacatgctatgaatgtggcattcctggccatct 218
|||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 1573 aagaagaggcggacatgttatgaatgtggcatcgctggccatct 1616
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 532 aagaaaaagaagagaaggacgtgctatgaatgcggcatagctggtcatctctcctcagaa 591
|||||||||||||| |||| || |||||||| ||||| ||||| |||||| | || |||
Sbjct: 1567 aagaaaaagaagaggcggacatgttatgaatgtggcatcgctggccatctcgcgtcggaa 1626
Query: 592 tgccccaaca 601
||||| ||||
Sbjct: 1627 tgcccaaaca 1636
Score = 44.1 bits (22), Expect = 0.52
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 aagaagagacggacatgctatgaatgtggc 75
|||||||| |||||||| ||||||||||||
Sbjct: 1573 aagaagaggcggacatgttatgaatgtggc 1602
>gb|AC108504.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10,
complete sequence
Length = 140282
Score = 97.6 bits (49), Expect = 4e-17
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 64 tatgaatgtggcgttcctggtcatctatcatctgcttgcccaaataaaagtgctcctgaa 123
|||||||||||| ||||||||| | || ||| ||||||| ||||| | ||| |||||
Sbjct: 30504 tatgaatgtggcacgcctggtcatatctcttcttcttgccctaataagaaggcttctgaa 30445
Query: 124 gtcatagttgatgaaaataaggccaatactgagtcagccacaacagcatcgaagaagaga 183
| ||| ||||||||| ||||| ||| ||| |||| |||| || | || ||||| ||
Sbjct: 30444 gccatttctgatgaaaagaaggctaatgttgactcagtcacagcatcgtcaaagaaaagg 30385
Query: 184 cggacatgctatgaatgtggcattcctggccatctgtcgtctgcttgcccaaa 236
||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 30384 cggacatgctatgaatgtggcattcctggccatctctcatcggcttgcccaaa 30332
Score = 93.7 bits (47), Expect = 6e-16
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 25 gactcagtcccaacatcgtcgaagaagagacggacatgctatgaatgtggcgttcctggt 84
||||||||| || ||||||| ||||| || ||||||||||||||||||||| |||||||
Sbjct: 30414 gactcagtcacagcatcgtcaaagaaaaggcggacatgctatgaatgtggcattcctggc 30355
Query: 85 catctatcatctgcttgcccaaa 107
||||| ||||| |||||||||||
Sbjct: 30354 catctctcatcggcttgcccaaa 30332
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 46 aagaagagacggacatgctatgaatgtggcgttcctggtcatctatcatctgcttgccc 104
|||||||| |||| |||||||||||| ||| ||||||||||||| ||||| ||||||||
Sbjct: 30213 aagaagaggcggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccc 30155
Score = 69.9 bits (35), Expect = 9e-09
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 362 ggaaatgttatgaatgtggcatctccggtcatctctcatcagcttgccccaacaa 416
||||||| |||||||| ||||| | |||||||||||||||||||||||||||||
Sbjct: 30203 ggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccccaacaa 30149
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 175 aagaagagacggacatgctatgaatgtggcattcctggccatctgtcgtctgcttgccc 233
|||||||| |||| |||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 30213 aagaagaggcggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccc 30155
Score = 58.0 bits (29), Expect = 3e-05
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 370 tatgaatgtggcatctccggtcatctctcatcagcttgccccaacaagaaggc 422
|||||||||||||| | || ||||||||||| |||||||| |||||||||||
Sbjct: 30375 tatgaatgtggcattcctggccatctctcatcggcttgcccaaacaagaaggc 30323
Score = 58.0 bits (29), Expect = 3e-05
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 553 tgctatgaatgcggcatagctggtcatctctcctcagaatgccccaaca 601
||||||||||||||||| ||||||||||||| |||| ||||||||||
Sbjct: 30198 tgctatgaatgcggcattcctggtcatctctcatcagcttgccccaaca 30150
Score = 56.0 bits (28), Expect = 1e-04
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 175 aagaagagacggacatgctatgaatgtggcattcctggccatct 218
|||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 30030 aagaagaggcggacatgttatgaatgtggcatcgctggccatct 29987
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 532 aagaaaaagaagagaaggacgtgctatgaatgcggcatagctggtcatctctcctcagaa 591
|||||||||||||| |||| || |||||||| ||||| ||||| |||||| | || |||
Sbjct: 30036 aagaaaaagaagaggcggacatgttatgaatgtggcatcgctggccatctcgcgtcggaa 29977
Query: 592 tgccccaaca 601
||||| ||||
Sbjct: 29976 tgcccaaaca 29967
Score = 44.1 bits (22), Expect = 0.52
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 46 aagaagagacggacatgctatgaatgtggc 75
|||||||| |||||||| ||||||||||||
Sbjct: 30030 aagaagaggcggacatgttatgaatgtggc 30001
>dbj|AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
complete sequence
Length = 29737217
Score = 97.6 bits (49), Expect = 4e-17
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 64 tatgaatgtggcgttcctggtcatctatcatctgcttgcccaaataaaagtgctcctgaa 123
|||||||||||| ||||||||| | || ||| ||||||| ||||| | ||| |||||
Sbjct: 758062 tatgaatgtggcacgcctggtcatatctcttcttcttgccctaataagaaggcttctgaa 758003
Query: 124 gtcatagttgatgaaaataaggccaatactgagtcagccacaacagcatcgaagaagaga 183
| ||| ||||||||| ||||| ||| ||| |||| |||| || | || ||||| ||
Sbjct: 758002 gccatttctgatgaaaagaaggctaatgttgactcagtcacagcatcgtcaaagaaaagg 757943
Query: 184 cggacatgctatgaatgtggcattcctggccatctgtcgtctgcttgcccaaa 236
||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 757942 cggacatgctatgaatgtggcattcctggccatctctcatcggcttgcccaaa 757890
Score = 93.7 bits (47), Expect = 6e-16
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 25 gactcagtcccaacatcgtcgaagaagagacggacatgctatgaatgtggcgttcctggt 84
||||||||| || ||||||| ||||| || ||||||||||||||||||||| |||||||
Sbjct: 757972 gactcagtcacagcatcgtcaaagaaaaggcggacatgctatgaatgtggcattcctggc 757913
Query: 85 catctatcatctgcttgcccaaa 107
||||| ||||| |||||||||||
Sbjct: 757912 catctctcatcggcttgcccaaa 757890
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 46 aagaagagacggacatgctatgaatgtggcgttcctggtcatctatcatctgcttgccc 104
|||||||| |||| |||||||||||| ||| ||||||||||||| ||||| ||||||||
Sbjct: 757771 aagaagaggcggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccc 757713
Score = 69.9 bits (35), Expect = 9e-09
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 362 ggaaatgttatgaatgtggcatctccggtcatctctcatcagcttgccccaacaa 416
||||||| |||||||| ||||| | |||||||||||||||||||||||||||||
Sbjct: 757761 ggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccccaacaa 757707
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 175 aagaagagacggacatgctatgaatgtggcattcctggccatctgtcgtctgcttgccc 233
|||||||| |||| |||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 757771 aagaagaggcggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccc 757713
Score = 58.0 bits (29), Expect = 3e-05
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 370 tatgaatgtggcatctccggtcatctctcatcagcttgccccaacaagaaggc 422
|||||||||||||| | || ||||||||||| |||||||| |||||||||||
Sbjct: 757933 tatgaatgtggcattcctggccatctctcatcggcttgcccaaacaagaaggc 757881
Score = 58.0 bits (29), Expect = 3e-05
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 553 tgctatgaatgcggcatagctggtcatctctcctcagaatgccccaaca 601
||||||||||||||||| ||||||||||||| |||| ||||||||||
Sbjct: 757756 tgctatgaatgcggcattcctggtcatctctcatcagcttgccccaaca 757708
Score = 56.0 bits (28), Expect = 1e-04
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 175 aagaagagacggacatgctatgaatgtggcattcctggccatct 218
|||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 757588 aagaagaggcggacatgttatgaatgtggcatcgctggccatct 757545
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 532 aagaaaaagaagagaaggacgtgctatgaatgcggcatagctggtcatctctcctcagaa 591
|||||||||||||| |||| || |||||||| ||||| ||||| |||||| | || |||
Sbjct: 757594 aagaaaaagaagaggcggacatgttatgaatgtggcatcgctggccatctcgcgtcggaa 757535
Query: 592 tgccccaaca 601
||||| ||||
Sbjct: 757534 tgcccaaaca 757525
Score = 44.1 bits (22), Expect = 0.52
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 46 aagaagagacggacatgctatgaatgtggc 75
|||||||| |||||||| ||||||||||||
Sbjct: 757588 aagaagaggcggacatgttatgaatgtggc 757559
>gb|AC093921.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22,
complete sequence
Length = 117919
Score = 97.6 bits (49), Expect = 4e-17
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 64 tatgaatgtggcgttcctggtcatctatcatctgcttgcccaaataaaagtgctcctgaa 123
|||||||||||| ||||||||| | || ||| ||||||| ||||| | ||| |||||
Sbjct: 103243 tatgaatgtggcacgcctggtcatatctcttcttcttgccctaataagaaggcttctgaa 103184
Query: 124 gtcatagttgatgaaaataaggccaatactgagtcagccacaacagcatcgaagaagaga 183
| ||| ||||||||| ||||| ||| ||| |||| |||| || | || ||||| ||
Sbjct: 103183 gccatttctgatgaaaagaaggctaatgttgactcagtcacagcatcgtcaaagaaaagg 103124
Query: 184 cggacatgctatgaatgtggcattcctggccatctgtcgtctgcttgcccaaa 236
||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 103123 cggacatgctatgaatgtggcattcctggccatctctcatcggcttgcccaaa 103071
Score = 93.7 bits (47), Expect = 6e-16
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 25 gactcagtcccaacatcgtcgaagaagagacggacatgctatgaatgtggcgttcctggt 84
||||||||| || ||||||| ||||| || ||||||||||||||||||||| |||||||
Sbjct: 103153 gactcagtcacagcatcgtcaaagaaaaggcggacatgctatgaatgtggcattcctggc 103094
Query: 85 catctatcatctgcttgcccaaa 107
||||| ||||| |||||||||||
Sbjct: 103093 catctctcatcggcttgcccaaa 103071
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 46 aagaagagacggacatgctatgaatgtggcgttcctggtcatctatcatctgcttgccc 104
|||||||| |||| |||||||||||| ||| ||||||||||||| ||||| ||||||||
Sbjct: 102952 aagaagaggcggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccc 102894
Score = 69.9 bits (35), Expect = 9e-09
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 362 ggaaatgttatgaatgtggcatctccggtcatctctcatcagcttgccccaacaa 416
||||||| |||||||| ||||| | |||||||||||||||||||||||||||||
Sbjct: 102942 ggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccccaacaa 102888
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 175 aagaagagacggacatgctatgaatgtggcattcctggccatctgtcgtctgcttgccc 233
|||||||| |||| |||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 102952 aagaagaggcggaaatgctatgaatgcggcattcctggtcatctctcatcagcttgccc 102894
Score = 58.0 bits (29), Expect = 3e-05
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 370 tatgaatgtggcatctccggtcatctctcatcagcttgccccaacaagaaggc 422
|||||||||||||| | || ||||||||||| |||||||| |||||||||||
Sbjct: 103114 tatgaatgtggcattcctggccatctctcatcggcttgcccaaacaagaaggc 103062
Score = 58.0 bits (29), Expect = 3e-05
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 553 tgctatgaatgcggcatagctggtcatctctcctcagaatgccccaaca 601
||||||||||||||||| ||||||||||||| |||| ||||||||||
Sbjct: 102937 tgctatgaatgcggcattcctggtcatctctcatcagcttgccccaaca 102889
Score = 56.0 bits (28), Expect = 1e-04
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 175 aagaagagacggacatgctatgaatgtggcattcctggccatct 218
|||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 102769 aagaagaggcggacatgttatgaatgtggcatcgctggccatct 102726
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 532 aagaaaaagaagagaaggacgtgctatgaatgcggcatagctggtcatctctcctcagaa 591
|||||||||||||| |||| || |||||||| ||||| ||||| |||||| | || |||
Sbjct: 102775 aagaaaaagaagaggcggacatgttatgaatgtggcatcgctggccatctcgcgtcggaa 102716
Query: 592 tgccccaaca 601
||||| ||||
Sbjct: 102715 tgcccaaaca 102706
Score = 44.1 bits (22), Expect = 0.52
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 46 aagaagagacggacatgctatgaatgtggc 75
|||||||| |||||||| ||||||||||||
Sbjct: 102769 aagaagaggcggacatgttatgaatgtggc 102740
>emb|AL034553.12 |HS914P20 Human DNA sequence from clone RP5-914P20 on chromosome 20q13.13-13.2
Contains the ADNP gene for activity-dependent
neuroprotector, the PSMD10P gene for proteasome (prosome,
macropain) 26S subunit non-ATPase 10 pseudogene, the DPM1
gene for dolichyl-phosphate mannosyltransferase catalytic
subunit polypeptide 1, the MOCS3 gene for molybdenum
cofactor synthesis 3 and two CpG islands, complete
sequence
Length = 105334
Score = 40.1 bits (20), Expect = 8.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 532 aagaaaaagaagagaaggac 551
||||||||||||||||||||
Sbjct: 29834 aagaaaaagaagagaaggac 29853
>dbj|AP003548.2 | Homo sapiens genomic DNA, chromosome 8q23, clone:KB1448A5
Length = 178420
Score = 40.1 bits (20), Expect = 8.2
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 254 ttgtttctaaccacacacagcctt 277
|||||||| |||||||||||||||
Sbjct: 40294 ttgtttcttaccacacacagcctt 40317
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,197,691
Number of Sequences: 3902068
Number of extensions: 6197691
Number of successful extensions: 129046
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128510
Number of HSP's gapped (non-prelim): 536
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)