Clone Information

BLAST Search Result

Clone Name	baak4m04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	KASC1_HORVU (P23902) 3-oxoacyl-[acyl-carrier-protein] synthase I...	87	3e-17
2	KASC1_ARATH (P52410) 3-oxoacyl-[acyl-carrier-protein] synthase I...	82	1e-15
3	FABF_SYNY3 (P73283) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	62	1e-09
4	FABF_VIBCH (Q9KQH9) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	56	6e-08
5	FABF_VIBHA (P55338) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	55	1e-07
6	FABF_SHIFL (P0AAI8) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	55	2e-07
7	FABF_ECOLI (P0AAI5) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	55	2e-07
8	FABF_ECOL6 (P0AAI6) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	55	2e-07
9	FABF_ECO57 (P0AAI7) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	55	2e-07
10	NODE_RHIS3 (P72331) Nodulation protein E (Host-specificity of no...	53	5e-07
11	FABF_STAAW (Q8NXE1) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	53	5e-07
12	FABF_STAAS (Q6GAU2) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	53	5e-07
13	FABF_STAAR (Q6GIA3) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	53	5e-07
14	FABF_STAAN (Q7A6F8) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	53	5e-07
15	FABF_STAAM (Q99VA6) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	53	5e-07
16	FABF_STAAC (Q5HHA1) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	53	5e-07
17	KASM_ARATH (Q8L3X9) 3-oxoacyl-[acyl-carrier-protein] synthase, m...	52	9e-07
18	NODE_RHILT (P04684) Nodulation protein E (Host-specificity of no...	52	1e-06
19	FABF_RHIME (P56902) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	51	2e-06
20	FABF_STAAU (Q5TKS0) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	51	3e-06
21	NOE4_RHIME (P06231) Nodulation protein E (Host-specificity of no...	51	3e-06
22	NODE_RHIME (P06230) Nodulation protein E (Host-specificity of no...	51	3e-06
23	NODE_RHILV (P04683) Nodulation protein E (Host-specificity of no...	50	4e-06
24	FAB1_MYCTU (P63454) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	49	1e-05
25	FAB1_MYCLE (Q9CBS7) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	49	1e-05
26	FAB1_MYCBO (P63455) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	49	1e-05
27	KAS1_STRHA (Q05356) Putative polyketide beta-ketoacyl synthase 1...	47	4e-05
28	KAS1_STRGA (P16538) Tetracenomycin C polyketide putative beta-ke...	46	8e-05
29	KAS1_STRCN (Q02578) Putative polyketide beta-ketoacyl synthase 1...	45	1e-04
30	KASA_STRCO (Q02059) Actinorhodin polyketide putative beta-ketoac...	45	1e-04
31	FABB_HAEIN (P43710) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	45	1e-04
32	FAB2_MYCLE (O69473) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	43	5e-04
33	FAB2_MYCTU (P63456) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	43	5e-04
34	FAB2_MYCBO (P63457) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ...	43	5e-04
35	KAS1_STRCO (P23155) Putative polyketide beta-ketoacyl synthase 1...	42	9e-04
36	KAS1_STRVN (P16540) Granaticin polyketide putative beta-ketoacyl...	42	0.002
37	PKSF_BACSU (P40804) Putative polyketide beta-ketoacyl synthase (...	41	0.003
38	OXSM_HUMAN (Q9NWU1) 3-oxoacyl-[acyl-carrier-protein] synthase, m...	40	0.003
39	OXSM_MOUSE (Q9D404) 3-oxoacyl-[acyl-carrier-protein] synthase, m...	40	0.004
40	FABB_ECOLI (P0A953) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	40	0.004
41	FABB_ECOL6 (P0A954) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	40	0.004
42	KAS1_STRCM (P41175) Putative polyketide beta-ketoacyl synthase 1...	39	0.010
43	FABB_BUCAI (P57193) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	39	0.013
44	FABB_BUCAP (Q8KA28) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	37	0.038
45	KAS1_STRRM (P43678) Oxytetracycline polyketide putative beta-ket...	36	0.084
46	CEM1_YEAST (P39525) 3-oxoacyl-[acyl-carrier-protein] synthase ho...	36	0.084
47	FAS2_PENPA (P15368) Fatty acid synthase alpha subunit (EC 2.3.1....	34	0.24
48	FABB_BUCBP (Q89AY4) 3-oxoacyl-[acyl-carrier-protein] synthase 1 ...	33	0.54
49	FAS2_CANAL (P43098) Fatty acid synthase alpha subunit (EC 2.3.1....	31	2.1
50	ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC...	31	2.7
51	FAS2_YEAST (P19097) Fatty acid synthase alpha subunit (EC 2.3.1....	30	3.5
52	RAPA_HAEDU (Q7VKV0) RNA polymerase-associated protein rapA (EC 3...	30	4.6
53	VL2_HPV30 (P36756) Minor capsid protein L2	30	6.0
54	ERYA3_SACER (Q03133) Erythronolide synthase, modules 5 and 6 (EC...	30	6.0
55	FAS_BOVIN (Q71SP7) Fatty acid synthase (EC 2.3.1.85) [Includes: ...	30	6.0
56	Y1396_METJA (Q58791) Hypothetical protein MJ1396	29	7.8
57	PMPA_CHLTR (O84417) Probable outer membrane protein pmpA precurs...	29	7.8
58	POL2_RRVS (P36324) RNA2 polyprotein (P2) [Contains: P2A protein ...	29	7.8

>KASC1_HORVU (P23902) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast|
           precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I)
           (KAS I)
          Length = 462

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   VKPCSLLWPNP-QLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVV 177
           V+    ++ NP ++++NSTKSM GH +GAAGG+EA+A +++I TGWVHP +N  NPE  V
Sbjct: 365 VRAIKQVFKNPSEIKINSTKSMIGHCLGAAGGLEAIATIKSITTGWVHPTINQFNPEPEV 424

Query: 178 DVGVLVGSEKERCEVKVALXXXXXXXXXXXXILFAPFK 291
           D    V +EK++ EV V +            ++FAPFK
Sbjct: 425 DFDT-VANEKKQHEVNVGISNSFGFGGHNSVVVFAPFK 461

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>KASC1_ARATH (P52410) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast|
           precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I)
           (KAS I)
          Length = 473

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 39/85 (45%), Positives = 57/85 (67%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           +++N+TKSM GH +GAAGG+EA+A V+AI TGW+HP++N  NPE+ VD    V +EK++ 
Sbjct: 389 IKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNPEQAVDFDT-VPNEKKQH 447

Query: 217 EVKVALXXXXXXXXXXXXILFAPFK 291
           EV VA+            + F+ FK
Sbjct: 448 EVDVAISNSFGFGGHNSVVAFSAFK 472

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>FABF_SYNY3 (P73283) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 416

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 30/57 (52%), Positives = 39/57 (68%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEK 207
           + V+STKSMTGHL+G +GGIEAVA V AI    V P +NLENP+   D+  + G  +
Sbjct: 333 IAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSR 389

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>FABF_VIBCH (Q9KQH9) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 413

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 26/53 (49%), Positives = 39/53 (73%)
 Frame = +1

Query: 34  QLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVL 192
           Q+ V+STKSMTGHL+GAAG +EA+  V ++    V P +NL+NPE+ + V ++
Sbjct: 329 QVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQMVPPTINLDNPEEGLGVDLV 381

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>FABF_VIBHA (P55338) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 414

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 25/53 (47%), Positives = 40/53 (75%)
 Frame = +1

Query: 34  QLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVL 192
           Q+ V+STKSMTGHL+GAAG +EA+  V ++    V P +NL++PE+ +D+ ++
Sbjct: 329 QVLVSSTKSMTGHLLGAAGSVEAIITVLSLVDQIVPPTINLDDPEEGLDIDLV 381

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>FABF_SHIFL (P0AAI8) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 412

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 36/47 (76%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDV 183
           V+STKSMTGHL+GAAG +E++  + A+R   V P +NL+NP++  D+
Sbjct: 331 VSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDL 377

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>FABF_ECOLI (P0AAI5) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 412

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 36/47 (76%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDV 183
           V+STKSMTGHL+GAAG +E++  + A+R   V P +NL+NP++  D+
Sbjct: 331 VSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDL 377

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>FABF_ECOL6 (P0AAI6) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 412

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 36/47 (76%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDV 183
           V+STKSMTGHL+GAAG +E++  + A+R   V P +NL+NP++  D+
Sbjct: 331 VSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDL 377

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>FABF_ECO57 (P0AAI7) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 412

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 36/47 (76%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDV 183
           V+STKSMTGHL+GAAG +E++  + A+R   V P +NL+NP++  D+
Sbjct: 331 VSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDL 377

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>NODE_RHIS3 (P72331) Nodulation protein E (Host-specificity of nodulation|
           protein B) (EC 2.3.1.-)
          Length = 402

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           + ++STKSM  H +GAA  +E +ACV AI+ G V P  N   P+   D+ V     +ER 
Sbjct: 320 MSISSTKSMHAHCLGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVARER- 378

Query: 217 EVKVAL 234
           +V+VAL
Sbjct: 379 KVRVAL 384

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>FABF_STAAW (Q8NXE1) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 414

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           L+V+STKSMTGHL+GA GGIEA+    +I+   V P ++   P+   D+ + V +E +  
Sbjct: 330 LKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDI-VPNEAQDL 388

Query: 217 EVKVALXXXXXXXXXXXXILFAPFK 291
           ++  A+            ++F  F+
Sbjct: 389 DITYAMSNSLGFGGHNAVLVFKKFE 413

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>FABF_STAAS (Q6GAU2) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 414

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           L+V+STKSMTGHL+GA GGIEA+    +I+   V P ++   P+   D+ + V +E +  
Sbjct: 330 LKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDI-VPNEAQDL 388

Query: 217 EVKVALXXXXXXXXXXXXILFAPFK 291
           ++  A+            ++F  F+
Sbjct: 389 DITYAMSNSLGFGGHNAVLVFKKFE 413

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>FABF_STAAR (Q6GIA3) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 414

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           L+V+STKSMTGHL+GA GGIEA+    +I+   V P ++   P+   D+ + V +E +  
Sbjct: 330 LKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDI-VPNEAQDL 388

Query: 217 EVKVALXXXXXXXXXXXXILFAPFK 291
           ++  A+            ++F  F+
Sbjct: 389 DITYAMSNSLGFGGHNAVLVFKKFE 413

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>FABF_STAAN (Q7A6F8) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 414

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           L+V+STKSMTGHL+GA GGIEA+    +I+   V P ++   P+   D+ + V +E +  
Sbjct: 330 LKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDI-VPNEAQDL 388

Query: 217 EVKVALXXXXXXXXXXXXILFAPFK 291
           ++  A+            ++F  F+
Sbjct: 389 DITYAMSNSLGFGGHNAVLVFKKFE 413

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>FABF_STAAM (Q99VA6) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 414

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           L+V+STKSMTGHL+GA GGIEA+    +I+   V P ++   P+   D+ + V +E +  
Sbjct: 330 LKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDI-VPNEAQDL 388

Query: 217 EVKVALXXXXXXXXXXXXILFAPFK 291
           ++  A+            ++F  F+
Sbjct: 389 DITYAMSNSLGFGGHNAVLVFKKFE 413

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>FABF_STAAC (Q5HHA1) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 414

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           L+V+STKSMTGHL+GA GGIEA+    +I+   V P ++   P+   D+ + V +E +  
Sbjct: 330 LKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDI-VPNEAQDL 388

Query: 217 EVKVALXXXXXXXXXXXXILFAPFK 291
           ++  A+            ++F  F+
Sbjct: 389 DITYAMSNSLGFGGHNAVLVFKKFE 413

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>KASM_ARATH (Q8L3X9) 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial|
           precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase)
           (mtKAS)
          Length = 461

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 27/82 (32%), Positives = 43/82 (52%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           L  +STK  TGHL+GAAG +EA+  + AI  G     LN++NP+ + D   +  +  ++ 
Sbjct: 378 LAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKM 437

Query: 217 EVKVALXXXXXXXXXXXXILFA 282
            V+ A+            +LFA
Sbjct: 438 LVRTAMSNSFGFGGTNASLLFA 459

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>NODE_RHILT (P04684) Nodulation protein E (Host-specificity of nodulation|
           protein B) (EC 2.3.1.-)
          Length = 401

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = +1

Query: 34  QLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKE- 210
           Q+ V+STKSM  H +GAA  +E +ACV AI+ G + P  N   P+   D+ V     +E 
Sbjct: 319 QMSVSSTKSMHAHCLGAASALEMIACVMAIQEGVIPPTANYREPDPQCDLDVTPNVPREQ 378

Query: 211 RC 216
           RC
Sbjct: 379 RC 380

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>FABF_RHIME (P56902) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 421

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +1

Query: 34  QLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKER 213
           ++ ++STKS  GHL+GAAG +EA+    AIR     P LNL+NP     + ++    ++R
Sbjct: 335 RISMSSTKSAIGHLLGAAGAVEAIFSALAIRDNIAPPTLNLDNPSVETKIDLVPHVARKR 394

Query: 214 CEVKVAL 234
            E+ VAL
Sbjct: 395 -EINVAL 400

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>FABF_STAAU (Q5TKS0) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II) (Fragment)
          Length = 403

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 25/66 (37%), Positives = 42/66 (63%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           L+V+STKSMTGHL+GA GGIEA+    +I+   + P ++   P+   D+ + V +E +  
Sbjct: 323 LKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKIAPTIHAVTPDPECDLDI-VPNEAQDL 381

Query: 217 EVKVAL 234
           ++  A+
Sbjct: 382 DITYAM 387

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>NOE4_RHIME (P06231) Nodulation protein E (Host-specificity of nodulation|
           protein B) (EC 2.3.1.-)
          Length = 401

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 27/66 (40%), Positives = 39/66 (59%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           + ++STKS   H IGAA  +E +ACV AI+ G V P  N   P+   D+ V     +ER 
Sbjct: 319 MSISSTKSTHAHCIGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVPRER- 377

Query: 217 EVKVAL 234
           +V+VA+
Sbjct: 378 KVRVAM 383

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>NODE_RHIME (P06230) Nodulation protein E (Host-specificity of nodulation|
           protein B) (EC 2.3.1.-)
          Length = 402

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 27/66 (40%), Positives = 39/66 (59%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           + ++STKS   H IGAA  +E +ACV AI+ G V P  N   P+   D+ V     +ER 
Sbjct: 320 MSISSTKSTHAHCIGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVPRER- 378

Query: 217 EVKVAL 234
           +V+VA+
Sbjct: 379 KVRVAM 384

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>NODE_RHILV (P04683) Nodulation protein E (Host-specificity of nodulation|
           protein B) (EC 2.3.1.-)
          Length = 403

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 26/66 (39%), Positives = 39/66 (59%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERC 216
           + ++STKS   H +GAA  +E +ACV AI+ G V P  N   P+   D+ V     +ER 
Sbjct: 320 MSISSTKSTHAHCLGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVPRER- 378

Query: 217 EVKVAL 234
           +V+VA+
Sbjct: 379 KVRVAM 384

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>FAB1_MYCTU (P63454) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (Beta-ketoacyl-ACP synthase 1) (KAS 1)
          Length = 416

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 23/58 (39%), Positives = 33/58 (56%)
 Frame = +1

Query: 34  QLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEK 207
           Q  V + KS  GH IGA G +E+V  V  +R G + P LN E P+  +D+ V+ G  +
Sbjct: 333 QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPR 390

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>FAB1_MYCLE (Q9CBS7) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (Beta-ketoacyl-ACP synthase 1) (KAS 1)
          Length = 416

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +1

Query: 34  QLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEK 207
           Q  V + KS  GH IGA G +E+V  V A+R G + P LN + P+  +D+ ++ G  +
Sbjct: 333 QAAVYAPKSALGHSIGAVGALESVLTVLALRDGVIPPTLNYQTPDPEIDLDIVAGEPR 390

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>FAB1_MYCBO (P63455) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (Beta-ketoacyl-ACP synthase 1) (KAS 1)
          Length = 416

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 23/58 (39%), Positives = 33/58 (56%)
 Frame = +1

Query: 34  QLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEK 207
           Q  V + KS  GH IGA G +E+V  V  +R G + P LN E P+  +D+ V+ G  +
Sbjct: 333 QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPR 390

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>KAS1_STRHA (Q05356) Putative polyketide beta-ketoacyl synthase 1 (EC 2.3.1.-)|
           (KS) (Polyketide condensing enzyme)
          Length = 422

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 24/57 (42%), Positives = 32/57 (56%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKER 213
           ++S KSM GH +GA G IE VACV A+    V P  N E P+   D+  +    +ER
Sbjct: 337 MSSIKSMVGHSLGAIGSIEVVACVLALAHQVVPPTANYETPDPECDLDYVPREARER 393

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>KAS1_STRGA (P16538) Tetracenomycin C polyketide putative beta-ketoacyl|
           synthase 1 (EC 2.3.1.-)
          Length = 426

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 22/57 (38%), Positives = 31/57 (54%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKER 213
           V+S KSM GH +GA G +E  AC  AI  G + P  N E P+   D+  +    +E+
Sbjct: 341 VSSIKSMIGHSLGAIGSLELAACALAIEHGVIPPTANYEEPDPECDLDYVPNVAREQ 397

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>KAS1_STRCN (Q02578) Putative polyketide beta-ketoacyl synthase 1 (EC 2.3.1.-)|
          Length = 422

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKER 213
           ++S KSM GH +GA G IE VACV A+    V P  N E P+   D+  +  + + R
Sbjct: 337 MSSIKSMVGHSLGAIGAIEVVACVLALARQVVPPTANYETPDPECDLDYVPRTARPR 393

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>KASA_STRCO (Q02059) Actinorhodin polyketide putative beta-ketoacyl synthase 1|
           (EC 2.3.1.-) (actI ORF1)
          Length = 467

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKER 213
           V+S KSM GH +GA G +E  ACV A+  G V P  NL   +   D+  +    +ER
Sbjct: 380 VSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARER 436

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>FABB_HAEIN (P43710) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase I)
           (Beta-ketoacyl-ACP synthase I) (KAS I)
          Length = 406

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/79 (26%), Positives = 41/79 (51%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKERCEV 222
           ++STKSMTGH +GAAG  EA+  +  +   ++ P++N+E  ++  +   +V   KE   +
Sbjct: 323 ISSTKSMTGHSLGAAGAHEAIYTLLMLDNDFIAPSINIETLDEAAEGCNIVTETKENAGL 382

Query: 223 KVALXXXXXXXXXXXXILF 279
           +  +            ++F
Sbjct: 383 QTVMSNSFGFGGTNATLIF 401

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>FAB2_MYCLE (O69473) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (Beta-ketoacyl-ACP synthase 2) (KAS 2)
          Length = 420

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = +1

Query: 28  NPQLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEK 207
           N +  V + KS  GH +GA G +E++  V A+R   + P LNL N +  +D+ V+ G  +
Sbjct: 335 NNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPDIDLDVVAGKPR 394

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>FAB2_MYCTU (P63456) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (Beta-ketoacyl-ACP synthase 2) (KAS 2)
          Length = 417

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 20/55 (36%), Positives = 32/55 (58%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEK 207
           V + KS  GH +GA G +E++  V A+R   + P LNL N +  +D+ V+ G  +
Sbjct: 337 VYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPR 391

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>FAB2_MYCBO (P63457) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (Beta-ketoacyl-ACP synthase 2) (KAS 2)
          Length = 417

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 20/55 (36%), Positives = 32/55 (58%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEK 207
           V + KS  GH +GA G +E++  V A+R   + P LNL N +  +D+ V+ G  +
Sbjct: 337 VYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPR 391

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>KAS1_STRCO (P23155) Putative polyketide beta-ketoacyl synthase 1 (EC 2.3.1.-)|
           (WhiE ORF III)
          Length = 423

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKER 213
           ++S KSM GH +GA G IE  ACV A+    V P  N   P+   D+  +    +ER
Sbjct: 338 MSSIKSMVGHSLGAIGSIELAACVLAMAHQVVPPTANYTTPDPECDLDYVPREARER 394

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>KAS1_STRVN (P16540) Granaticin polyketide putative beta-ketoacyl synthase 1|
           (EC 2.3.1.-) (ORF1)
          Length = 421

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGVLVGSEKER 213
           V+S KSM GH +GA G IE  A V AI    V P  NL  P+   D+  +  + +E+
Sbjct: 337 VSSIKSMGGHSLGAIGSIEIAASVLAIEHNVVPPTANLHTPDPECDLDYVPLTAREQ 393

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>PKSF_BACSU (P40804) Putative polyketide beta-ketoacyl synthase (EC 2.3.1.-)|
          Length = 416

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 16/41 (39%), Positives = 30/41 (73%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENP 165
           +N+TKS+TGH + AAG +E ++ +  ++   +HP+ NL++P
Sbjct: 330 INATKSITGHGLSAAGIVEIISVLLQMKKSALHPSRNLDHP 370

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>OXSM_HUMAN (Q9NWU1) 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial|
           precursor (EC 2.3.1.41) (Beta-ketoacyl synthase)
          Length = 459

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/49 (44%), Positives = 28/49 (57%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDV 183
           L V+STK  TGHL+GAAG +EA     A     + P LNL+  E   D+
Sbjct: 374 LAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDL 422

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>OXSM_MOUSE (Q9D404) 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial|
           precursor (EC 2.3.1.41) (Beta-ketoacyl synthase)
          Length = 459

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDV 183
           L ++STK  TGHL+GAAG +EA     A     + P LNL+  E   D+
Sbjct: 374 LAISSTKGATGHLLGAAGAVEATFTALACYHQKLPPTLNLDCTEPEFDL 422

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>FABB_ECOLI (P0A953) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase I)
           (Beta-ketoacyl-ACP synthase I) (KAS I)
          Length = 406

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 16/39 (41%), Positives = 29/39 (74%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLE 159
           +++TK+MTGH +GAAG  EA+  +  +  G++ P++N+E
Sbjct: 324 ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIE 362

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>FABB_ECOL6 (P0A954) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase I)
           (Beta-ketoacyl-ACP synthase I) (KAS I)
          Length = 406

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 16/39 (41%), Positives = 29/39 (74%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLE 159
           +++TK+MTGH +GAAG  EA+  +  +  G++ P++N+E
Sbjct: 324 ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIE 362

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>KAS1_STRCM (P41175) Putative polyketide beta-ketoacyl synthase 1 (EC 2.3.1.-)|
           (ORF1)
          Length = 420

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDV 183
           V+S KSM GH +GA G IE  A   A+    V P  NL  P+   D+
Sbjct: 335 VSSIKSMVGHSLGAIGSIEIAASALAMEYDVVPPTANLHTPDPECDL 381

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>FABB_BUCAI (P57193) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase I)
           (Beta-ketoacyl-ACP synthase I) (KAS I)
          Length = 406

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPE 168
           +++TKSMTGH +GA+G  E +  +  ++  ++ P +N+EN E
Sbjct: 326 ISATKSMTGHGLGASGVHEMIYTLLMLKYNFIAPTINIENLE 367

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>FABB_BUCAP (Q8KA28) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase I)
           (Beta-ketoacyl-ACP synthase I) (KAS I)
          Length = 407

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVD 180
           +++TKSMTGH +G +G  E +  +  ++  ++ P++N+E  E   D
Sbjct: 327 ISATKSMTGHALGVSGVHEIIYTLLMMKYNFIAPSINIETIEPSAD 372

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>KAS1_STRRM (P43678) Oxytetracycline polyketide putative beta-ketoacyl synthase|
           1
          Length = 425

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVDVGV--LVGSEKE 210
           ++S KSM GH +GA   +E  A    I  G + P  NL  P+   D+    LV  E E
Sbjct: 341 ISSIKSMIGHSLGAICALEVAASALRIEHGVIPPTANLREPDPDCDLDYVPLVAREAE 398

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>CEM1_YEAST (P39525) 3-oxoacyl-[acyl-carrier-protein] synthase homolog (EC|
           2.3.1.41) (Beta-ketoacyl-ACP synthase homolog)
          Length = 442

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLEN 162
           L ++S K   GHL+GAAG +E++  + +++   +   LNL+N
Sbjct: 351 LYISSNKGAIGHLLGAAGAVESIFTICSLKDDKMPHTLNLDN 392

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>FAS2_PENPA (P15368) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:|
            Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase
            (EC 1.1.1.100) (Beta-ketoacyl reductase);
            3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
            (Beta-ketoacyl synth
          Length = 1857

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 55   KSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVD 180
            K +TGH  GAAG      C+Q + +G V  N N +N +KV++
Sbjct: 1554 KYLTGHPKGAAGAWMFNGCLQVLDSGLVPGNRNADNVDKVME 1595

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>FABB_BUCBP (Q89AY4) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase I)
           (Beta-ketoacyl-ACP synthase I) (KAS I)
          Length = 407

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 13/38 (34%), Positives = 27/38 (71%)
 Frame = +1

Query: 43  VNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNL 156
           ++STKS+TGH +GA+G  E +  +  ++  ++ P++N+
Sbjct: 326 LSSTKSITGHSLGASGVQEMIYSLLMLKYNFIVPSINI 363

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>FAS2_CANAL (P43098) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:|
            Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase
            (EC 1.1.1.100) (Beta-ketoacyl reductase);
            3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
            (Beta-ketoacyl synth
          Length = 1885

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 55   KSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVD 180
            K +TGH  GAAG       +Q + +G V  N N +N +K+++
Sbjct: 1582 KYLTGHPKGAAGAWMLNGAIQILESGLVPGNRNADNVDKLLE 1623

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>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF|
           2) (6-deoxyerythronolide B synthase II) (DEBS 2)
          Length = 3566

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVD-----VGVLVGS 201
           L + S KS  GH   AAG    +  V A+R G +   L++E P   VD     V +L G+
Sbjct: 365 LWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGN 424

Query: 202 EKER 213
           +  R
Sbjct: 425 QPWR 428

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>FAS2_YEAST (P19097) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:|
            Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase
            (EC 1.1.1.100) (Beta-ketoacyl reductase);
            3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
            (Beta-ketoacyl synth
          Length = 1887

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 55   KSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVD 180
            K +TGH  GAAG       +Q + +G +  N N +N +K+++
Sbjct: 1578 KFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILE 1619

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>RAPA_HAEDU (Q7VKV0) RNA polymerase-associated protein rapA (EC 3.6.1.-)|
           (ATP-dependent helicase hepA)
          Length = 973

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 299 EFYLKGANRIDELCPPNPNEFDSATFTSHLSFSDPTNTPTSTTFSGFSKF 150
           E+Y +G N  +E CP   N F   + T    F+DP  T       GF +F
Sbjct: 629 EWYHRGLNAFEETCPMGSNLFAEFSETLQSFFNDPQAT-------GFEEF 671

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>VL2_HPV30 (P36756) Minor capsid protein L2|
          Length = 463

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = -2

Query: 290 LKGANRIDELCPPNPNEFDSATFTSHLSFSDPTNTPTSTTFSGFSKFRFGWTQPV 126
           L   N  D L     N  D A  +SHLS + P+  PT+T    FS      T P+
Sbjct: 338 LSANNSFDGLYDIYANLDDEAPVSSHLSIATPSRLPTNTVPLSFSSQTTNVTIPL 392

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>ERYA3_SACER (Q03133) Erythronolide synthase, modules 5 and 6 (EC 2.3.1.94) (ORF|
           3) (6-deoxyerythronolide B synthase III) (DEBS 3)
          Length = 3171

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 25  PNPQLRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENPEKVVD 180
           P+  L + S KS  GH   AAG    +  V A+R G +   L+ + P   ++
Sbjct: 358 PDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIE 409

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>FAS_BOVIN (Q71SP7) Fatty acid synthase (EC 2.3.1.85) [Includes:|
           [Acyl-carrier-protein] S-acetyltransferase (EC
           2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase
           (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase
           (EC 2.3.1.41); 3-oxoacyl-[acyl-
          Length = 2513

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 37  LRVNSTKSMTGHLIGAAGGIEAVACVQAIRTGWVHPNLNLENP 165
           LR+ STKS  GH   A+G       + ++  G   PNL+  NP
Sbjct: 320 LRIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHNP 362

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>Y1396_METJA (Q58791) Hypothetical protein MJ1396|
          Length = 2894

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 142 PNLNLENPEKVVDVGVLVGSEKERCEVK 225
           P LN+  PEK+  + ++ G+ KE+ +VK
Sbjct: 371 PKLNISKPEKIKKIILICGNAKEKIKVK 398

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>PMPA_CHLTR (O84417) Probable outer membrane protein pmpA precursor|
           (Polymorphic membrane protein A)
          Length = 975

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -1

Query: 228 HLYFASLLL*SHQHAHVHYFFWVLQIQIWMDPTSSYSLYTSNSFYSTSCSYKMP 67
           HLY  +L + +  H  V  F      +I + P SS +LYT NSF+  + S K P
Sbjct: 495 HLYNGTLSIENGAHLIVQSFKQTGG-RISLSPGSSLALYTMNSFFHGNISSKEP 547

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>POL2_RRVS (P36324) RNA2 polyprotein (P2) [Contains: P2A protein (2A);|
           Movement protein (2B-MP); Coat protein (2C-CP)]
          Length = 1107

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 185 PTSTTFSGFSKFRFGWTQPVLIACTQATASIPPA 84
           P     S FS F+   TQP+L+ C Q+  S+ PA
Sbjct: 183 PIYLLISTFSMFQQYGTQPLLLECAQSAGSLIPA 216


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,360,752
Number of Sequences: 219361
Number of extensions: 1426905
Number of successful extensions: 4224
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 4122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4223
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result