ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4m22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009063.1| Triticum aestivum clone wds1f.pk002.p21:fis, full insert mRNA sequence Length = 1378 Score = 339 bits (171), Expect = 5e-90 Identities = 254/281 (90%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 1 ggccgccgacggctgctgtgagctcctcaaggcatgacttgannnnnnntatacgcaggc 60 ||||||||||||||||||||||||||||||||| |||||||| || |||||||| Sbjct: 1024 ggccgccgacggctgctgtgagctcctcaaggcgtgacttgagggggg-tacacgcaggc 1082 Query: 61 acccagatcaagagctggccatggccggctctggctccatctggttgcctgcaggcaaat 120 ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 1083 acccagatcaagagccggccatggccggctctggctccgtctggttgtctgcaggcaaat 1142 Query: 121 cattcttggctctactgcattggggcgtccttccatatcacactaccttcttccctgaaa 180 ||||||||||||||||||||||||| ||||||||| || || |||| |||||||||| | Sbjct: 1143 cattcttggctctactgcattggggtgtccttccacgtcgcattacc-tcttccctgaga 1201 Query: 181 attccggtgctggttttcagggatgctgtgatggtggggatccccatatgcctgtaaaaa 240 | ||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||| Sbjct: 1202 actccggtgctggttctcagggatcttgtgatgatggggctccccatatgcctgtaaaat 1261 Query: 241 agtatcggaagcactagcagtgtaccacgggtatgaactct 281 ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1262 agtatcggaagcactagcagtgtactacgggtatgaactct 1302
>gb|AY110209.1| Zea mays CL834_-1 mRNA sequence Length = 1242 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 101 ctggttgcctgcaggcaaatcattcttggctctactgcattgggg 145 ||||||| ||| ||||||||||||||||||| | ||||||||||| Sbjct: 841 ctggttgtctgtaggcaaatcattcttggctgttctgcattgggg 885
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 ggccgccgacggctgctgtgagctcctcaaggcatgac 38 ||||| |||||||||||| |||||||||||||| |||| Sbjct: 18465 ggccggcgacggctgctgcgagctcctcaaggcgtgac 18428 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 106 tgcctgcaggcaaatcattcttggctct 133 |||||| ||||||||||||||||||||| Sbjct: 18361 tgcctgtaggcaaatcattcttggctct 18334
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 ggccgccgacggctgctgtgagctcctcaaggcatgac 38 ||||| |||||||||||| |||||||||||||| |||| Sbjct: 24784769 ggccggcgacggctgctgcgagctcctcaaggcgtgac 24784732 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 106 tgcctgcaggcaaatcattcttggctct 133 |||||| ||||||||||||||||||||| Sbjct: 24784665 tgcctgtaggcaaatcattcttggctct 24784638
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 ggccgccgacggctgctgtgagctcctcaaggcatgac 38 ||||| |||||||||||| |||||||||||||| |||| Sbjct: 70181 ggccggcgacggctgctgcgagctcctcaaggcgtgac 70144 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 106 tgcctgcaggcaaatcattcttggctct 133 |||||| ||||||||||||||||||||| Sbjct: 70077 tgcctgtaggcaaatcattcttggctct 70050
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 ggccgccgacggctgctgtgagctcctcaaggcatgac 38 ||||| |||||||||||| |||||||||||||| |||| Sbjct: 24874553 ggccggcgacggctgctgcgagctcctcaaggcgtgac 24874516 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 106 tgcctgcaggcaaatcattcttggctct 133 |||||| ||||||||||||||||||||| Sbjct: 24874449 tgcctgtaggcaaatcattcttggctct 24874422
>dbj|AK106398.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-F12, full insert sequence Length = 2034 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 ggccgccgacggctgctgtgagctcctcaaggcatgac 38 ||||| |||||||||||| |||||||||||||| |||| Sbjct: 1608 ggccggcgacggctgctgcgagctcctcaaggcgtgac 1645 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 106 tgcctgcaggcaaatcattcttggctct 133 |||||| ||||||||||||||||||||| Sbjct: 1712 tgcctgtaggcaaatcattcttggctct 1739
>gb|AY111961.1| Zea mays CL834_3 mRNA sequence Length = 589 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 7 cgacggctgctgtgagctcctcaaggc 33 |||||||||||| |||||||||||||| Sbjct: 252 cgacggctgctgcgagctcctcaaggc 278 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 aggcaaatcattcttggctctactgcattgggg 145 ||||||||||||||||||| | | ||||||||| Sbjct: 348 aggcaaatcattcttggctgttccgcattgggg 380
>emb|AL844591.6| Mouse DNA sequence from clone RP23-414J11 on chromosome 2, complete sequence Length = 215003 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 ttggagtttgtttgtttggttt 412 |||||||||||||||||||||| Sbjct: 101551 ttggagtttgtttgtttggttt 101572
>gb|AC124699.4| Mus musculus BAC clone RP24-187B13 from chromosome 1, complete sequence Length = 177793 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 ttggagtttgtttgtttggtt 411 ||||||||||||||||||||| Sbjct: 89820 ttggagtttgtttgtttggtt 89800
>gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, complete sequence Length = 238516 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 ggagtttgtttgtttggttta 413 ||||||||||||||||||||| Sbjct: 17995 ggagtttgtttgtttggttta 17975
>gb|AY089316.1| Drosophila melanogaster AT12489 full insert cDNA Length = 1543 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 ttttaagacatacaatctatt 440 ||||||||||||||||||||| Sbjct: 1521 ttttaagacatacaatctatt 1501
>gb|AC104260.5| Homo sapiens chromosome 15, clone CTD-2536I1, complete sequence Length = 191528 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 tttgtttgtttggtttaggtg 417 ||||||||||||||||||||| Sbjct: 67417 tttgtttgtttggtttaggtg 67397
>gb|AC016322.9| Homo sapiens chromosome 15, clone RP11-29B16, complete sequence Length = 187466 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 tttgtttgtttggtttaggtg 417 ||||||||||||||||||||| Sbjct: 181233 tttgtttgtttggtttaggtg 181253
>gb|S81261.1|S81259S2 CCAAT-binding factor B subunit=HAP2 subunit homolog, CBF-B=CCAAT-binding factor B subunit [Brassica napus, cv. Westar, Genomic, 2071 nt, segment 2 of 2] Length = 2071 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ggcaaatcattcttggctcta 134 ||||||||||||||||||||| Sbjct: 1810 ggcaaatcattcttggctcta 1830
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 11 ggctgctgtgagctcctcaaggcatgact 39 ||||||||||| |||||||| |||||||| Sbjct: 26381051 ggctgctgtgacctcctcaaagcatgact 26381023
>dbj|AK073742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067G24, full insert sequence Length = 1640 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 11 ggctgctgtgagctcctcaaggcatgact 39 ||||||||||| |||||||| |||||||| Sbjct: 1041 ggctgctgtgacctcctcaaagcatgact 1069
>gb|AC173707.2| Mus musculus BAC clone RP23-296A12 from chromosome 16, complete sequence Length = 171458 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 ggagtttgtttgtttggttta 413 ||||||||||||||||||||| Sbjct: 25443 ggagtttgtttgtttggttta 25463
>gb|U33885.1|BNU33885 Brassica napus clone bncbf-b2 CCAAT-binding factor B subunit homolog mRNA, complete cds Length = 1222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ggcaaatcattcttggctcta 134 ||||||||||||||||||||| Sbjct: 1019 ggcaaatcattcttggctcta 1039
>gb|U33884.1|BNU33884 Brassica napus clone bncbf-b1 CCAAT-binding factor B subunit homolog mRNA, complete cds Length = 1220 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ggcaaatcattcttggctcta 134 ||||||||||||||||||||| Sbjct: 1017 ggcaaatcattcttggctcta 1037
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 11 ggctgctgtgagctcctcaaggcatgact 39 ||||||||||| |||||||| |||||||| Sbjct: 26309220 ggctgctgtgacctcctcaaagcatgact 26309192
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 11 ggctgctgtgagctcctcaaggcatgact 39 ||||||||||| |||||||| |||||||| Sbjct: 95324 ggctgctgtgacctcctcaaagcatgact 95296
>gb|AC145301.4| Mus musculus BAC clone RP24-68G17 from 3, complete sequence Length = 224101 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 tgctcttggcaatgtgcttgg 384 ||||||||||||||||||||| Sbjct: 81338 tgctcttggcaatgtgcttgg 81318
>gb|AC115508.5| Rattus norvegicus 2 BAC CH230-355B17 (Children's Hospital Oakland Research Institute) complete sequence Length = 209019 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 tttgtttgtttggtttaggt 416 |||||||||||||||||||| Sbjct: 73481 tttgtttgtttggtttaggt 73500
>gb|BC046333.1| Mus musculus dihydropyrimidinase-like 4, mRNA (cDNA clone IMAGE:6492897), with apparent retained intron Length = 4239 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 gtttgtttgtttggtttaggtgag 419 ||||||||||||| |||||||||| Sbjct: 865 gtttgtttgtttgttttaggtgag 888
>gb|AC121586.3| Mus musculus BAC clone RP23-273A13 from 2, complete sequence Length = 154614 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 agttggagtttgtttgtttg 408 |||||||||||||||||||| Sbjct: 57372 agttggagtttgtttgtttg 57391
>gb|AC116038.3| Homo sapiens chromosome 3 clone RP11-134J21, complete sequence Length = 167476 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 gttggagtttgtttgtttggttta 413 ||||||||||||||||||| |||| Sbjct: 76938 gttggagtttgtttgtttgtttta 76915
>gb|BC042581.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 5, mRNA (cDNA clone IMAGE:4481208), complete cds Length = 4571 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 agagctggccatggccggctctgg 94 |||||||||||||||||| ||||| Sbjct: 786 agagctggccatggccgggtctgg 763
>gb|AC138452.10| Medicago truncatula clone mth2-17p11, complete sequence Length = 127710 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 agttggagtttgtttgtttg 408 |||||||||||||||||||| Sbjct: 135 agttggagtttgtttgtttg 116
>gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete sequence Length = 125478 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 agttggagtttgtttgtttg 408 |||||||||||||||||||| Sbjct: 81750 agttggagtttgtttgtttg 81731
>gb|AC132050.4| Rattus norvegicus 20 BAC CH230-118G13 (Children's Hospital Oakland Research Institute) complete sequence Length = 247624 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 atatcacactaccttcttcc 174 |||||||||||||||||||| Sbjct: 175654 atatcacactaccttcttcc 175635
>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence Length = 173840 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 atccccatatgcctgtaaaaaagt 243 |||||||||||||| ||||||||| Sbjct: 49886 atccccatatgcctataaaaaagt 49909
>gb|AC104269.1| Caenorhabditis briggsae cosmid CB047C11, complete sequence Length = 96428 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 caatgtgcttggagtaagtt 392 |||||||||||||||||||| Sbjct: 43370 caatgtgcttggagtaagtt 43389
>gb|AC161756.3| Mus musculus BAC clone RP24-106J5 from chromosome 16, complete sequence Length = 219500 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 agagctggccatggccggctctgg 94 |||||||||||||||||| ||||| Sbjct: 110284 agagctggccatggccgggtctgg 110261
>gb|AC022126.7| Homo sapiens chromosome 5 clone CTD-2141G3, complete sequence Length = 187765 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 acactaccttcttccctgaaaatt 183 |||||||||||||| ||||||||| Sbjct: 121450 acactaccttcttctctgaaaatt 121427
>gb|AY275681.1| Homo sapiens mutS homolog 3 (E. coli) (MSH3) gene, complete cds Length = 223885 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 atttcagggtgttgtcatgt 343 |||||||||||||||||||| Sbjct: 166980 atttcagggtgttgtcatgt 166999
>gb|AC016565.6|AC016565 Homo sapiens chromosome 5 clone CTC-538O12, complete sequence Length = 140092 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atttcagggtgttgtcatgt 343 |||||||||||||||||||| Sbjct: 134052 atttcagggtgttgtcatgt 134033
>emb|BX831111.1|CNS0A0OH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS59ZD07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1385 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ggcaaatcattcttggctct 133 |||||||||||||||||||| Sbjct: 1113 ggcaaatcattcttggctct 1132
>gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome 14, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gtttgtttgtttggtttagg 415 |||||||||||||||||||| Sbjct: 103564 gtttgtttgtttggtttagg 103545
>ref|XM_225691.3| PREDICTED: Rattus norvegicus similar to Hypothetical zinc finger protein KIAA0222 (predicted) (LOC291406), mRNA Length = 4552 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ctggccatggccggctctgg 94 |||||||||||||||||||| Sbjct: 3432 ctggccatggccggctctgg 3413
>gb|AC022493.12|AC022493 Homo sapiens 5 BAC RP11-241J12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153078 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atttcagggtgttgtcatgt 343 |||||||||||||||||||| Sbjct: 63591 atttcagggtgttgtcatgt 63572
>gb|AC109183.17| Mus musculus chromosome 15, clone RP24-86P1, complete sequence Length = 182733 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 tttgtttgtttggtttaggt 416 |||||||||||||||||||| Sbjct: 116866 tttgtttgtttggtttaggt 116885
>emb|AL929450.10| Mouse DNA sequence from clone RP23-288M21 on chromosome 2, complete sequence Length = 94062 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gctgtgagctcctcaaggca 34 |||||||||||||||||||| Sbjct: 55230 gctgtgagctcctcaaggca 55211
>emb|BX088532.7| Zebrafish DNA sequence from clone CH211-127E17 in linkage group 8, complete sequence Length = 115792 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtgttgtcatgtgttagggt 351 |||||||||||||||||||| Sbjct: 111429 gtgttgtcatgtgttagggt 111448
>emb|BX276109.11| Mouse DNA sequence from clone RP23-209P8 on chromosome 2, complete sequence Length = 69864 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 agttggagtttgtttgtttg 408 |||||||||||||||||||| Sbjct: 39363 agttggagtttgtttgtttg 39344
>gb|AF220405.1|AF220405 Vitis riparia transcription factor (Rev136-2) mRNA, complete cds Length = 1251 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 caggcaaatcattcttggct 131 |||||||||||||||||||| Sbjct: 991 caggcaaatcattcttggct 1010
>gb|AC118005.9| Mus musculus chromosome 19, clone RP23-318J14, complete sequence Length = 195212 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 396 gtttgtttgtttggtttaggtgagtttt 423 |||||||||||| |||| |||||||||| Sbjct: 106616 gtttgtttgttttgttttggtgagtttt 106589
>gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosome 7, complete sequence Length = 144527 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 gtttgtttgtttggtttaggtgag 419 ||||||||||||| |||||||||| Sbjct: 27819 gtttgtttgtttgttttaggtgag 27842
>emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chromosome 4, complete sequence Length = 203992 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tttgtttgtttggtttaggt 416 |||||||||||||||||||| Sbjct: 103799 tttgtttgtttggtttaggt 103780 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,293,235 Number of Sequences: 3902068 Number of extensions: 5293235 Number of successful extensions: 125408 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125221 Number of HSP's gapped (non-prelim): 186 length of query: 486 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 464 effective length of database: 17,147,199,772 effective search space: 7956300694208 effective search space used: 7956300694208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
