ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbags8j04 | 608 | AV919945 | not_full | ref|XM_469973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2851 | 48 | not_full | VPS35_HUMAN (Q96QK1) Vacuolar protein sorting 35 (Vesicle protein sorting 35) (hVPS35) (Maternal-embryonic 3) Length = 796 | 9 | -- | --- | - | -- | --- | - |
| rbags8i22 | 84 | AV834261 | not_full | gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 | 55 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8i21 | 359 | AV919944 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 111 | not_full | YK25_YEAST (P36138) Hypothetical 21.1 kDa protein in GAP1-NAP1 intergenic region Length = 191 | 3 | -- | --- | - | -- | --- | - |
| rbags8i15 | 134 | AV919943 | not_full | emb|Y08490.1|HVATUB2 H.vulgare mRNA for alpha-tubulin 2 Length = 1708 | 500 | not_full | TBA_LYTPI (P02553) Tubulin alpha chain (Fragment) Length = 161 | 126 | -- | --- | - | -- | --- | - |
| rbags8i14 | 607 | AV919942 | not_full | gb|BT017567.1| Zea mays clone EL01N0426C03.c mRNA sequence Length = 1373 | 41 | not_full | Y1367_METJA (Q58762) Hypothetical ABC transporter ATP-binding protein MJ1367 Length = 297 | 37 | -- | --- | - | -- | --- | - |
| rbags8i07 | 496 | AV919941 | not_full | gb|AF488730.1| Triticum aestivum small Ran-related GTP-binding protein mRNA, complete cds Length = 1055 | 353 | not_full | RAN1B_LOTJA (P54766) GTP-binding nuclear protein Ran1B (Fragment) Length = 209 | 50 | -- | --- | - | -- | --- | - |
| rbags8i05 | 538 | AV919940 | not_full | ref|XM_473222.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 | 18 | not_full | ILL3_ARATH (O81641) IAA-amino acid hydrolase ILR1-like 3 precursor (EC 3.5.1.-) Length = 428 | 19 | -- | --- | - | -- | --- | - |
| rbags8i03 | 630 | AV919939 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 57 | not_full | 6PGL_HUMAN (O95336) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) Length = 258 | 102 | -- | --- | - | -- | --- | - |
| rbags8i02 | 94 | AV919938 | not_full | ref|XM_483237.1| Oryza sativa (japonica cultivar-group), mRNA Length = 369 | 52 | not_full | RL31_NICGU (P46290) 60S ribosomal protein L31 Length = 120 | 8 | -- | --- | - | -- | --- | - |
| rbags8h20 | 527 | AV919937 | not_full | ref|XM_477102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1570 | 24 | not_full | OST48_MOUSE (O54734) Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit) (DDOST 48 kDa subunit) Length = 441 | 7 | -- | --- | - | -- | --- | - |
| rbags8h19 | 226 | AV919936 | not_full | emb|AL160282.18| Human DNA sequence from clone RP11-315I20 on chromosome 1q12.1-21.3, complete sequence Length = 191594 | 5 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8h18 | 98 | AV919935 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 23 | not_full | CH10C_SPIOL (Q02073) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) Length = 255 | 2 | -- | --- | - | -- | --- | - |
| rbags8h12 | 510 | AV919934 | not_full | gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 | 24 | not_full | BPA1_HUMAN (Q03001) Bullous pemphigoid antigen 1 isoforms 1/2/3/4/5/8 (230 kDa bullous pemphigoid antigen) (BPA) (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) (Fragment) Length = 3214 | 3 | -- | --- | - | -- | --- | - |
| rbags8h11 | 591 | AV919933 | not_full | ref|NM_197152.1| Oryza sativa (japonica cultivar-group) putative microtubule-severing protein subunit (OSJNBa0041P03.15), mRNA Length = 2601 | 52 | not_full | KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homolog 1 Length = 837 | 9 | -- | --- | - | -- | --- | - |
| rbags8h03 | 580 | AV919932 | not_full | gb|AF309381.1| Oryza sativa (japonica cultivar-group) clone S4892 putative glutathione S-transferase OsGSTZ1 mRNA, complete cds Length = 1200 | 51 | not_full | GSTZ_WHEAT (O04437) Glutathione S-transferase (EC 2.5.1.18) (GST class-zeta) Length = 213 | 41 | -- | --- | - | -- | --- | - |
| rbags8h01 | 531 | AV834260 | not_full | ref|NM_187605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3744 | 40 | not_full | CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14) Length = 567 | 22 | -- | --- | - | -- | --- | - |
| rbags8g24 | 84 | AV919931 | not_full | gb|AC126055.4| Mus musculus BAC clone RP23-368O6 from chromosome 16, complete sequence Length = 197096 | 5 | not_full | LACB_STRMU (P26424) Galactose-6-phosphate isomerase subunit lacB (EC 5.3.1.26) Length = 171 | 1 | -- | --- | - | -- | --- | - |
| rbags8g22 | 49 | AV834259 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8g21 | 453 | AV919930 | not_full | emb|AM039893.1| Hordeum vulgare sam1 gene for putative AdoMet synthase 1 Length = 1515 | 221 | not_full | METK_HORVU (P50299) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) Length = 394 | 177 | -- | --- | - | -- | --- | - |
| rbags8g17 | 329 | AV919929 | not_full | gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 | 215 | not_full | HSP72_ARATH (P22954) Heat shock cognate 70 kDa protein 2 (Hsc70.2) Length = 653 | 138 | -- | --- | - | -- | --- | - |
| rbags8g15 | 80 | AV919928 | not_full | gb|AC161171.5| Mus musculus chromosome 3, clone RP24-326F21, complete sequence Length = 153637 | 47 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8g14 | 560 | AV919927 | not_full | ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 | 100 | not_full | RL5A_ORYSA (P49625) 60S ribosomal protein L5-1 Length = 304 | 48 | -- | --- | - | -- | --- | - |
| rbags8g13 | 474 | AV919926 | not_full | emb|CR385065.21| Zebrafish DNA sequence from clone CH211-232F6 in linkage group 6, complete sequence Length = 194459 | 19 | not_full | IF2_EHRRW (Q5HB61) Translation initiation factor IF-2 Length = 856 | 4 | -- | --- | - | -- | --- | - |
| rbags8g08 | 159 | AV919925 | not_full | dbj|AK099502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028J05, full insert sequence Length = 1550 | 24 | not_full | SYFM_HUMAN (O95363) Phenylalanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.20) (Phenylalanine--tRNA ligase) (PheRS) Length = 451 | 5 | -- | --- | - | -- | --- | - |
| rbags8g05 | 630 | AV919924 | not_full | emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 | 65 | not_full | ENPL_HORVU (P36183) Endoplasmin homolog precursor (GRP94 homolog) Length = 809 | 174 | -- | --- | - | -- | --- | - |
| rbags8g01 | 594 | AV919923 | not_full | gb|AY107437.1| Zea mays PCO062669 mRNA sequence Length = 1217 | 34 | not_full | YCHE_ECOLI (P25743) Hypothetical UPF0056 protein yhcE Length = 215 | 4 | -- | --- | - | -- | --- | - |
| rbags8f23 | 549 | AV919922 | not_full | emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein Length = 1487 | 136 | not_full | LGE1_CAEEL (Q21389) Glycosyltransferase-like protein LARGE (EC 2.4.-.-) Length = 631 | 1 | -- | --- | - | -- | --- | - |
| rbags8f21 | 217 | AV919921 | not_full | gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 | 12 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8f15 | 421 | AV919920 | not_full | ref|XM_627368.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_4840), partial mRNA Length = 7230 | 19 | not_full | CTX_PSEAE (P14608) Cytotoxin precursor (Leucocidin) Length = 286 | 3 | -- | --- | - | -- | --- | - |
| rbags8f09 | 495 | AV919919 | not_full | ref|XM_481988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 | 60 | not_full | EDF1_BRARE (Q6PBY3) Endothelial differentiation-related factor 1 homolog (EDF-1) Length = 146 | 50 | -- | --- | - | -- | --- | - |
| rbags8f08 | 77 | AV919918 | not_full | emb|Y18626.1|TAE18626 Triticum aestivum mRNA for reversibly glycosylated polypeptide Length = 1393 | 13 | not_full | PER3_HUMAN (P56645) Period circadian protein 3 (hPER3) Length = 1201 | 1 | -- | --- | - | -- | --- | - |
| rbags8f06 | 463 | AV919917 | not_full | ref|XM_506177.1| PREDICTED Oryza sativa (japonica cultivar-group), P0039H02.103 mRNA Length = 1276 | 44 | not_full | SY132_ARATH (Q8VZU2) Syntaxin-132 (AtSYP132) Length = 304 | 79 | -- | --- | - | -- | --- | - |
| rbags8f05 | 605 | AV834258 | not_full | ref|XM_483252.1| Oryza sativa (japonica cultivar-group), mRNA Length = 711 | 36 | not_full | Y992_SYNY3 (P74516) Hypothetical tRNA/rRNA methyltransferase slr0992 (EC 2.1.1.-) Length = 153 | 34 | -- | --- | - | -- | --- | - |
| rbags8f03 | 568 | AV919916 | not_full | gb|AY109791.1| Zea mays CL4689_1 mRNA sequence Length = 1126 | 27 | not_full | NU2C_SYNY3 (P72714) NAD(P)H-quinone oxidoreductase chain 2 (EC 1.6.5.-) (NAD(P)H dehydrogenase I, chain 2) (NDH-1, chain 2) Length = 521 | 13 | -- | --- | - | -- | --- | - |
| rbags8f02 | 89 | AV834257 | not_full | gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, complete sequence Length = 187098 | 120 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8f01 | 574 | AV919915 | not_full | ref|XM_480480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1185 | 71 | not_full | LGUL_ORYSA (Q948T6) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) Length = 291 | 32 | -- | --- | - | -- | --- | - |
| rbags8e24 | 616 | AV834256 | not_full | gb|BT011374.1| Drosophila melanogaster RE01495 full insert cDNA Length = 4012 | 24 | not_full | PAP2_HUMAN (Q9BXP8) Pappalysin-2 precursor (EC 3.4.24.-) (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) Length = 1791 | 6 | -- | --- | - | -- | --- | - |
| rbags8e23 | 404 | AV834255 | not_full | gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 | 9 | not_full | DLGP4_HUMAN (Q9Y2H0) Disks large-associated protein 4 (DAP-4) (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 989 | 5 | -- | --- | - | -- | --- | - |
| rbags8e12 | 583 | AV919914 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 42 | not_full | STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein) Length = 2571 | 7 | -- | --- | - | -- | --- | - |
| rbags8e11 | 619 | AV919913 | not_full | emb|AL121809.6|CNS01DSK Human chromosome 14 DNA sequence BAC C-3028N15 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 213442 | 33 | not_full | VE6_HPV66 (Q80955) Protein E6 Length = 155 | 2 | -- | --- | - | -- | --- | - |
| rbags8e07 | 540 | AV834254 | not_full | ref|XM_474696.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1767 | 25 | not_full | CDT1_HUMAN (Q9H211) DNA replication factor Cdt1 (Double parked homolog) (DUP) Length = 546 | 6 | -- | --- | - | -- | --- | - |
| rbags8e05 | 663 | AV919912 | not_full | emb|AJ276012.1|HVU276012 Hordeum vulgare partial mRNA for alpha-tubulin 4 (atub4 gene) Length = 1050 | 500 | not_full | TBA1_PEA (P46259) Tubulin alpha-1 chain Length = 452 | 384 | -- | --- | - | -- | --- | - |
| rbags8e02 | 49 | AV834253 | not_full | emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase Length = 1710 | 4 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags8d23 | 494 | AV919911 | not_full | gb|AF488730.1| Triticum aestivum small Ran-related GTP-binding protein mRNA, complete cds Length = 1055 | 384 | not_full | RAN1B_LOTJA (P54766) GTP-binding nuclear protein Ran1B (Fragment) Length = 209 | 48 | -- | --- | - | -- | --- | - |
| rbags8d22 | 453 | AV919910 | not_full | gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman Birk trypsin inhibitor gene, complete cds; Stowaway MITE, complete sequence; and insertion sequences xl_tt1a and xl_tt1b putative ripening related protein gen | 16 | not_full | IBB_HORVU (P12940) Bowman-Birk type trypsin inhibitor Length = 124 | 58 | -- | --- | - | -- | --- | - |
| rbags8d21 | 627 | AV919909 | not_full | gb|BT009144.1| Triticum aestivum clone wl1n.pk0054.d8:fis, full insert mRNA sequence Length = 876 | 72 | not_full | NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-) Length = 568 | 74 | -- | --- | - | -- | --- | - |
| rbags8d20 | 419 | AV919908 | not_full | emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 | 472 | not_full | CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 | 95 | -- | --- | - | -- | --- | - |
| rbags8d18 | 557 | AV834252 | not_full | gb|BT018920.1| Zea mays clone Contig21.F mRNA sequence Length = 931 | 81 | not_full | ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1) Length = 3726 | 13 | -- | --- | - | -- | --- | - |
| rbags8d15 | 299 | AV834251 | not_full | gb|BT009210.1| Triticum aestivum clone wle1n.pk0047.h6:fis, full insert mRNA sequence Length = 966 | 11 | not_full | GSTF7_ARATH (Q96324) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi) Length = 214 | 9 | -- | --- | - | -- | --- | - |
| rbags8d12 | 527 | AV919907 | not_full | gb|BT008962.1| Triticum aestivum clone wdk1c.pk012.j14:fis, full insert mRNA sequence Length = 2511 | 22 | not_full | JPH4_MOUSE (Q80WT0) Junctophilin-4 (Junctophilin-like 1 protein) Length = 628 | 2 | -- | --- | - | -- | --- | - |
