ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187605.1| Oryza sativa (japonica cultivar-group), predic... 127 4e-26
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 127 4e-26
3gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
5dbj|AK073981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
6gb|AY111581.1| Zea mays CL2734_1 mRNA sequence 96 1e-16
7gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 42 1.8
8gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5,... 42 1.8
9ref|XM_821830.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 hyp... 42 1.8
10emb|AJ310930.1|PRA310930 Phlebia radiata mRNA for manganese pero... 42 1.8
11gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.8
12emb|AL935209.14| Zebrafish DNA sequence from clone DKEY-61N16, c... 42 1.8
13gb|AC111129.12| Mus musculus chromosome 5, clone RP23-339H11, co... 40 7.2
14gb|AC159440.1| Trypanosoma brucei chromosome 3 clone RPCI93-2H15... 40 7.2
15ref|XM_361112.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.2
16gb|AY665559.1| Gallus gallus adenylosuccinate lyase (adsl) gene,... 40 7.2
17gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.2
18gb|AC102622.7| Mus musculus chromosome 3, clone RP23-434O10, com... 40 7.2
19emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4,... 40 7.2
20emb|Z81556.1|CEF58G1 Caenorhabditis elegans Cosmid F58G1, comple... 40 7.2
21emb|CR731756.2|CNS0GRKH Tetraodon nigroviridis full-length cDNA 40 7.2
22gb|AC110238.10| Mus musculus chromosome 5, clone RP23-106D12, co... 40 7.2
23emb|AL591069.5| Human DNA sequence from clone RP11-72O9 on chrom... 40 7.2
24emb|CR936848.6| Mouse DNA sequence from clone DN-315E9 on chromo... 40 7.2
25dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 7.2
26gb|AC010633.8| Homo sapiens chromosome 5 clone CTD-2317K6, compl... 40 7.2
27gb|AC008964.6|AC008964 Homo sapiens chromosome 5 clone CTD-2360A... 40 7.2
28tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome 40 7.2
29gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromo... 40 7.2
30gb|AC105312.2| Homo sapiens BAC clone RP11-17C4 from 4, complete... 40 7.2
31dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.2
32emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.2
33gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 7.2
34gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, comple... 40 7.2
35gb|DQ176432.1| Potamon ibericum prepro crustacean hyperglycemic ... 40 7.2
36gb|DQ176431.1| Potamon ibericum prepro crustacean hyperglycemic ... 40 7.2
37gb|AC161433.5| Mus musculus chromosome 8, clone RP23-50F12, comp... 40 7.2
38emb|AL683824.8| Mouse DNA sequence from clone RP23-90O18 on chro... 40 7.2
39gb|AC120785.13| Mus musculus chromosome 8, clone RP23-336P3, com... 40 7.2
40gb|L00676.1|SH1ULGNS Pseudorabies virus (Suid herpesvirus 1) UL1... 40 7.2 
>ref|NM_187605.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3744

 Score =  127 bits (64), Expect = 4e-26
 Identities = 205/252 (81%)
 Strand = Plus / Minus

                                                                        
Query: 250  tagctccttgcccatcaccaccgccgtcatcatcagcttaccggcgtccggaaaagtgtc 309
            ||||||||||||||| | |||||| ||||||||||  ||||| || || || |||   | 
Sbjct: 3699 tagctccttgcccattatcaccgcggtcatcatcaatttacccgcatcagggaaatcctt 3640

                                                                        
Query: 310  gtgctgcatcagcacctcctccaccgagaagcacttagcctccaggcctctcgcgtgcac 369
            ||||||||||||||| |||||||| ||||  ||  |  |||||| |||||||   |||||
Sbjct: 3639 gtgctgcatcagcacttcctccactgagagacatctgccctccaagcctctcagatgcac 3580

                                                                        
Query: 370  gtcctctttcctcacgggcagcacctcctcgaacgtgccgtcgaacaccaccgcgtccgg 429
            ||| |||||| |||| |||||||| ||||| ||||  |||||  ||||||| ||||| ||
Sbjct: 3579 gtcttctttcttcacaggcagcacgtcctcaaacgaaccgtcatacaccacggcgtctgg 3520

                                                                        
Query: 430  gctgtagcacagcctcgaagcattgaagaggaccattccttggagagattcttggatgac 489
            ||| || |||||||| || |||||||| |||||  | || || |||||||||||||||||
Sbjct: 3519 gctataacacagcctggaggcattgaacaggacagtgccctgaagagattcttggatgac 3460

                        
Query: 490  ttcgtcgctcca 501
            ||| ||||||||
Sbjct: 3459 ttcatcgctcca 3448
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 4e-26
 Identities = 205/252 (81%)
 Strand = Plus / Minus

                                                                           
Query: 250     tagctccttgcccatcaccaccgccgtcatcatcagcttaccggcgtccggaaaagtgtc 309
               ||||||||||||||| | |||||| ||||||||||  ||||| || || || |||   | 
Sbjct: 6548638 tagctccttgcccattatcaccgcggtcatcatcaatttacccgcatcagggaaatcctt 6548579

                                                                           
Query: 310     gtgctgcatcagcacctcctccaccgagaagcacttagcctccaggcctctcgcgtgcac 369
               ||||||||||||||| |||||||| ||||  ||  |  |||||| |||||||   |||||
Sbjct: 6548578 gtgctgcatcagcacttcctccactgagagacatctgccctccaagcctctcagatgcac 6548519

                                                                           
Query: 370     gtcctctttcctcacgggcagcacctcctcgaacgtgccgtcgaacaccaccgcgtccgg 429
               ||| |||||| |||| |||||||| ||||| ||||  |||||  ||||||| ||||| ||
Sbjct: 6548518 gtcttctttcttcacaggcagcacgtcctcaaacgaaccgtcatacaccacggcgtctgg 6548459

                                                                           
Query: 430     gctgtagcacagcctcgaagcattgaagaggaccattccttggagagattcttggatgac 489
               ||| || |||||||| || |||||||| |||||  | || || |||||||||||||||||
Sbjct: 6548458 gctataacacagcctggaggcattgaacaggacagtgccctgaagagattcttggatgac 6548399

                           
Query: 490     ttcgtcgctcca 501
               ||| ||||||||
Sbjct: 6548398 ttcatcgctcca 6548387
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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score =  127 bits (64), Expect = 4e-26
 Identities = 205/252 (81%)
 Strand = Plus / Minus

                                                                         
Query: 250   tagctccttgcccatcaccaccgccgtcatcatcagcttaccggcgtccggaaaagtgtc 309
             ||||||||||||||| | |||||| ||||||||||  ||||| || || || |||   | 
Sbjct: 91400 tagctccttgcccattatcaccgcggtcatcatcaatttacccgcatcagggaaatcctt 91341

                                                                         
Query: 310   gtgctgcatcagcacctcctccaccgagaagcacttagcctccaggcctctcgcgtgcac 369
             ||||||||||||||| |||||||| ||||  ||  |  |||||| |||||||   |||||
Sbjct: 91340 gtgctgcatcagcacttcctccactgagagacatctgccctccaagcctctcagatgcac 91281

                                                                         
Query: 370   gtcctctttcctcacgggcagcacctcctcgaacgtgccgtcgaacaccaccgcgtccgg 429
             ||| |||||| |||| |||||||| ||||| ||||  |||||  ||||||| ||||| ||
Sbjct: 91280 gtcttctttcttcacaggcagcacgtcctcaaacgaaccgtcatacaccacggcgtctgg 91221

                                                                         
Query: 430   gctgtagcacagcctcgaagcattgaagaggaccattccttggagagattcttggatgac 489
             ||| || |||||||| || |||||||| |||||  | || || |||||||||||||||||
Sbjct: 91220 gctataacacagcctggaggcattgaacaggacagtgccctgaagagattcttggatgac 91161

                         
Query: 490   ttcgtcgctcca 501
             ||| ||||||||
Sbjct: 91160 ttcatcgctcca 91149
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 4e-26
 Identities = 205/252 (81%)
 Strand = Plus / Minus

                                                                           
Query: 250     tagctccttgcccatcaccaccgccgtcatcatcagcttaccggcgtccggaaaagtgtc 309
               ||||||||||||||| | |||||| ||||||||||  ||||| || || || |||   | 
Sbjct: 6547851 tagctccttgcccattatcaccgcggtcatcatcaatttacccgcatcagggaaatcctt 6547792

                                                                           
Query: 310     gtgctgcatcagcacctcctccaccgagaagcacttagcctccaggcctctcgcgtgcac 369
               ||||||||||||||| |||||||| ||||  ||  |  |||||| |||||||   |||||
Sbjct: 6547791 gtgctgcatcagcacttcctccactgagagacatctgccctccaagcctctcagatgcac 6547732

                                                                           
Query: 370     gtcctctttcctcacgggcagcacctcctcgaacgtgccgtcgaacaccaccgcgtccgg 429
               ||| |||||| |||| |||||||| ||||| ||||  |||||  ||||||| ||||| ||
Sbjct: 6547731 gtcttctttcttcacaggcagcacgtcctcaaacgaaccgtcatacaccacggcgtctgg 6547672

                                                                           
Query: 430     gctgtagcacagcctcgaagcattgaagaggaccattccttggagagattcttggatgac 489
               ||| || |||||||| || |||||||| |||||  | || || |||||||||||||||||
Sbjct: 6547671 gctataacacagcctggaggcattgaacaggacagtgccctgaagagattcttggatgac 6547612

                           
Query: 490     ttcgtcgctcca 501
               ||| ||||||||
Sbjct: 6547611 ttcatcgctcca 6547600
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>dbj|AK073981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076C04, full
            insert sequence
          Length = 4184

 Score =  127 bits (64), Expect = 4e-26
 Identities = 205/252 (81%)
 Strand = Plus / Minus

                                                                        
Query: 250  tagctccttgcccatcaccaccgccgtcatcatcagcttaccggcgtccggaaaagtgtc 309
            ||||||||||||||| | |||||| ||||||||||  ||||| || || || |||   | 
Sbjct: 3931 tagctccttgcccattatcaccgcggtcatcatcaatttacccgcatcagggaaatcctt 3872

                                                                        
Query: 310  gtgctgcatcagcacctcctccaccgagaagcacttagcctccaggcctctcgcgtgcac 369
            ||||||||||||||| |||||||| ||||  ||  |  |||||| |||||||   |||||
Sbjct: 3871 gtgctgcatcagcacttcctccactgagagacatctgccctccaagcctctcagatgcac 3812

                                                                        
Query: 370  gtcctctttcctcacgggcagcacctcctcgaacgtgccgtcgaacaccaccgcgtccgg 429
            ||| |||||| |||| |||||||| ||||| ||||  |||||  ||||||| ||||| ||
Sbjct: 3811 gtcttctttcttcacaggcagcacgtcctcaaacgaaccgtcatacaccacggcgtctgg 3752

                                                                        
Query: 430  gctgtagcacagcctcgaagcattgaagaggaccattccttggagagattcttggatgac 489
            ||| || |||||||| || |||||||| |||||  | || || |||||||||||||||||
Sbjct: 3751 gctataacacagcctggaggcattgaacaggacagtgccctgaagagattcttggatgac 3692

                        
Query: 490  ttcgtcgctcca 501
            ||| ||||||||
Sbjct: 3691 ttcatcgctcca 3680
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>gb|AY111581.1| Zea mays CL2734_1 mRNA sequence
          Length = 883

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                       
Query: 371 tcctctttcctcacgggcagcacctcctcgaacgtgccgtcgaacaccaccgcgtccggg 430
           ||||||||| |||| ||||| || ||||| || ||||||||  ||||||| || ||||||
Sbjct: 469 tcctctttcttcacaggcagaacatcctcaaaggtgccgtcatacaccacagcatccggg 528

                                                                       
Query: 431 ctgtagcacagcctcgaagcattgaagaggaccattccttggagagattcttggatgact 490
           ||||| |||| ||| ||||| |||||||||||  || |||| |||||||||| |||||| 
Sbjct: 529 ctgtaacacaacctggaagctttgaagaggacagttgcttgaagagattcttcgatgacc 588

                               
Query: 491 tcgtcgctccagccctctga 510
           ||||| ||||| || |||||
Sbjct: 589 tcgtcactccaaccttctga 608
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     catcaccaccgccgtcatcat 282
               |||||||||||||||||||||
Sbjct: 1531998 catcaccaccgccgtcatcat 1531978
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>gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5, complete sequence
          Length = 148711

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 262    catcaccaccgccgtcatcat 282
              |||||||||||||||||||||
Sbjct: 106210 catcaccaccgccgtcatcat 106190
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>ref|XM_821830.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 hypothetical protein
           (Tb927.3.5470) partial mRNA
          Length = 528

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 262 catcaccaccgccgtcatcat 282
           |||||||||||||||||||||
Sbjct: 178 catcaccaccgccgtcatcat 158
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>emb|AJ310930.1|PRA310930 Phlebia radiata mRNA for manganese peroxidase (mnp3 gene)
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 316 catcagcacctcctccaccga 336
           |||||||||||||||||||||
Sbjct: 277 catcagcacctcctccaccga 257
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 266     accaccgccgtcatcatcagc 286
               |||||||||||||||||||||
Sbjct: 4915814 accaccgccgtcatcatcagc 4915834
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>emb|AL935209.14| Zebrafish DNA sequence from clone DKEY-61N16, complete sequence
          Length = 162012

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 46    gccgacaatggacatcagtacatca 70
             |||||||||||||| ||||||||||
Sbjct: 90169 gccgacaatggacaacagtacatca 90145
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>gb|AC111129.12| Mus musculus chromosome 5, clone RP23-339H11, complete sequence
          Length = 196458

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   acttagcctccaggcctctc 361
             ||||||||||||||||||||
Sbjct: 54368 acttagcctccaggcctctc 54387
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>gb|AC159440.1| Trypanosoma brucei chromosome 3 clone RPCI93-2H15, complete sequence
          Length = 152294

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   atcaccaccgccgtcatcat 282
             ||||||||||||||||||||
Sbjct: 31420 atcaccaccgccgtcatcat 31401
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>ref|XM_361112.1| Magnaporthe grisea 70-15 hypothetical protein (MG03655.4) partial
            mRNA
          Length = 2271

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  cagcacctcctcgaacgtgc 407
            ||||||||||||||||||||
Sbjct: 1000 cagcacctcctcgaacgtgc 981
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>gb|AY665559.1| Gallus gallus adenylosuccinate lyase (adsl) gene, complete cds
          Length = 15928

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  tctgaaactgatgcctgtga 525
            ||||||||||||||||||||
Sbjct: 5103 tctgaaactgatgcctgtga 5084
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     cttgcccatcaccaccgccg 275
               ||||||||||||||||||||
Sbjct: 3495537 cttgcccatcaccaccgccg 3495556
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>gb|AC102622.7| Mus musculus chromosome 3, clone RP23-434O10, complete sequence
          Length = 237899

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 261    ccatcaccaccgccgtcatcatca 284
              ||||||||||| ||||||||||||
Sbjct: 223315 ccatcaccaccaccgtcatcatca 223338
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>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    caccaccgccgtcatcatca 284
              ||||||||||||||||||||
Sbjct: 202016 caccaccgccgtcatcatca 201997
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>emb|Z81556.1|CEF58G1 Caenorhabditis elegans Cosmid F58G1, complete sequence
          Length = 37666

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   ccatcaccaccgccgtcatc 280
             ||||||||||||||||||||
Sbjct: 24617 ccatcaccaccgccgtcatc 24636
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>emb|CR731756.2|CNS0GRKH Tetraodon nigroviridis full-length cDNA
          Length = 1219

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 259 gcccatcaccaccgccgtcatcatcagc 286
           ||||| |||||||||||| |||||||||
Sbjct: 349 gcccagcaccaccgccgtgatcatcagc 322
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>gb|AC110238.10| Mus musculus chromosome 5, clone RP23-106D12, complete sequence
          Length = 197964

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    acttagcctccaggcctctc 361
              ||||||||||||||||||||
Sbjct: 181340 acttagcctccaggcctctc 181359
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>emb|AL591069.5| Human DNA sequence from clone RP11-72O9 on chromosome 6q25.2-26 Contains
              the 3' end of the SSLC22A3 gene for solute carrier family
              22 (extraneuronal monoamine transporter), member 3
              (extraneuronal monoamine transporter solute carrier family
              22 (organic cation transporter), member 3(EMT, EMTh,
              OCT3)), the APOARGC gene for apolipoprotein (a) related
              gene C and a plasminogen (PLG) pseudogene, complete
              sequence
          Length = 162083

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    ccatcaccaccgccgtcatcatca 284
              |||||||||||||| |||||||||
Sbjct: 104974 ccatcaccaccgccatcatcatca 104951
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>emb|CR936848.6| Mouse DNA sequence from clone DN-315E9 on chromosome 3, complete
             sequence
          Length = 144824

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   ccatcaccaccgccgtcatcatca 284
             ||||||||||| ||||||||||||
Sbjct: 90119 ccatcaccaccaccgtcatcatca 90096
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      gacaatggacatcagtacat 68
               ||||||||||||||||||||
Sbjct: 2027583 gacaatggacatcagtacat 2027602
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>gb|AC010633.8| Homo sapiens chromosome 5 clone CTD-2317K6, complete sequence
          Length = 195931

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    attcagccagcctacataaa 184
              ||||||||||||||||||||
Sbjct: 122946 attcagccagcctacataaa 122927
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>gb|AC008964.6|AC008964 Homo sapiens chromosome 5 clone CTD-2360A17, complete sequence
          Length = 143841

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   attcagccagcctacataaa 184
             ||||||||||||||||||||
Sbjct: 35994 attcagccagcctacataaa 35975
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>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 255   ccttgcccatcaccaccgccgtca 278
             ||||||||||||||| ||||||||
Sbjct: 67677 ccttgcccatcaccagcgccgtca 67654
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>gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromosome unknown, complete
             sequence
          Length = 179977

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   ccatcaccaccgccgtcatcatca 284
             ||||||||||| ||||||||||||
Sbjct: 31808 ccatcaccaccaccgtcatcatca 31785
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>gb|AC105312.2| Homo sapiens BAC clone RP11-17C4 from 4, complete sequence
          Length = 127437

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 210    agtccatgtccacaggctcatctg 233
              |||||||||||| |||||||||||
Sbjct: 105300 agtccatgtccaaaggctcatctg 105277
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     gcccatcaccaccgccgtca 278
               ||||||||||||||||||||
Sbjct: 8218664 gcccatcaccaccgccgtca 8218683
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 310     gtgctgcatcagcacctcctccac 333
               |||||||||||||||||| |||||
Sbjct: 2663024 gtgctgcatcagcacctcttccac 2663001
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 130     aaccaaataactccgattgcatgg 153
               ||||||| ||||||||||||||||
Sbjct: 4460831 aaccaaacaactccgattgcatgg 4460808
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>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence
          Length = 170634

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   catgtccacaggctcatctg 233
             ||||||||||||||||||||
Sbjct: 96423 catgtccacaggctcatctg 96404
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>gb|DQ176432.1| Potamon ibericum prepro crustacean hyperglycemic hormone
           pericardial organ isoform mRNA, complete cds
          Length = 1873

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 ccatcaccaccgccgtcatc 280
           ||||||||||||||||||||
Sbjct: 111 ccatcaccaccgccgtcatc 92
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>gb|DQ176431.1| Potamon ibericum prepro crustacean hyperglycemic hormone X organ
           isoform mRNA, complete cds
          Length = 1768

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 ccatcaccaccgccgtcatc 280
           ||||||||||||||||||||
Sbjct: 111 ccatcaccaccgccgtcatc 92
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>gb|AC161433.5| Mus musculus chromosome 8, clone RP23-50F12, complete sequence
          Length = 253440

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   ccatcaccaccgccgtcatcatca 284
             ||||||||||| ||||||||||||
Sbjct: 64055 ccatcaccaccaccgtcatcatca 64078



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   ccatcaccaccgccgtcatcatca 284
             ||||||||||| ||||||||||||
Sbjct: 63992 ccatcaccaccaccgtcatcatca 64015
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>emb|AL683824.8| Mouse DNA sequence from clone RP23-90O18 on chromosome 3, complete
             sequence
          Length = 233589

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   ccatcaccaccgccgtcatcatca 284
             ||||||||||| ||||||||||||
Sbjct: 56122 ccatcaccaccaccgtcatcatca 56099
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>gb|AC120785.13| Mus musculus chromosome 8, clone RP23-336P3, complete sequence
          Length = 238405

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   ccatcaccaccgccgtcatcatca 284
             ||||||||||| ||||||||||||
Sbjct: 95914 ccatcaccaccaccgtcatcatca 95891



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   ccatcaccaccgccgtcatcatca 284
             ||||||||||| ||||||||||||
Sbjct: 95851 ccatcaccaccaccgtcatcatca 95828
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>gb|L00676.1|SH1ULGNS Pseudorabies virus (Suid herpesvirus 1) UL18 through UL21 genes,
            complete cds and UL15 gene, 3' end
          Length = 9382

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 255  ccttgcccatcaccaccgccgtca 278
            ||||||||||||||| ||||||||
Sbjct: 3945 ccttgcccatcaccagcgccgtca 3922


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,745,870
Number of Sequences: 3902068
Number of extensions: 3745870
Number of successful extensions: 64602
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64287
Number of HSP's gapped (non-prelim): 305
length of query: 531
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 508
effective length of database: 17,143,297,704
effective search space: 8708795233632
effective search space used: 8708795233632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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